Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:54:10 (14883): wrapper (7.7.26015): starting
13:54:10 (14883): wrapper: running run_atlas (--nthreads 3)
[2026-03-14 13:54:10] Arguments: --nthreads 3
[2026-03-14 13:54:10] Threads: 3
[2026-03-14 13:54:10] Checking for CVMFS
[2026-03-14 13:54:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 13:54:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 13:54:11] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 13:54:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 13:54:11] 2.9.2.0 3054 79 49360 157278 0 50 30965841 36864000 0 130560 0 34694 99.992 2686 34000 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-14 13:54:11] CVMFS is ok
[2026-03-14 13:54:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 13:54:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 13:54:11] Further information can be found at the LHC@home message board.
[2026-03-14 13:54:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 13:54:11] Checking for apptainer binary...
[2026-03-14 13:54:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 13:54:11] Running /usr/bin/apptainer --version
[2026-03-14 13:54:11] apptainer version 1.4.1-1.1
[2026-03-14 13:54:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 13:54:11] atlasA230
[2026-03-14 13:54:11] apptainer works
[2026-03-14 13:54:11] Set ATHENA_PROC_NUMBER=3
[2026-03-14 13:54:11] Set ATHENA_CORE_NUMBER=3
[2026-03-14 13:54:11] Starting ATLAS job with PandaID=7054059560
[2026-03-14 13:54:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 15:32:34]  *** The last 200 lines of the pilot log: ***
[2026-03-14 15:32:34] 2026-03-14 14:31:57,893 | INFO     | aborting loop
[2026-03-14 15:32:34] 2026-03-14 14:31:57,956 | INFO     | [job] retrieve thread has finished
[2026-03-14 15:32:34] 2026-03-14 14:31:57,961 | INFO     | [job] queue monitor thread has finished
[2026-03-14 15:32:34] 2026-03-14 14:31:58,149 | INFO     | [data] copytool_in thread has finished
[2026-03-14 15:32:34] 2026-03-14 14:31:58,228 | INFO     | [data] control thread has finished
[2026-03-14 15:32:34] 2026-03-14 14:31:58,444 | INFO     | all job control threads have been joined
[2026-03-14 15:32:34] 2026-03-14 14:31:58,507 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 15:32:34] 2026-03-14 14:31:58,533 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 15:32:34] 2026-03-14 14:31:58,809 | INFO     | [payload] control thread has finished
[2026-03-14 15:32:34] 2026-03-14 14:31:58,898 | INFO     | [job] job monitor thread has finished
[2026-03-14 15:32:34] 2026-03-14 14:31:58,962 | INFO     | [data] copytool_out thread has finished
[2026-03-14 15:32:34] 2026-03-14 14:31:59,036 | INFO     | [payload] validate_post thread has finished
[2026-03-14 15:32:34] 2026-03-14 14:31:59,363 | INFO     | [job] validate thread has finished
[2026-03-14 15:32:34] 2026-03-14 14:31:59,435 | INFO     | [payload] failed_post thread has finished
[2026-03-14 15:32:34] 2026-03-14 14:31:59,446 | INFO     | [job] control thread has finished
[2026-03-14 15:32:34] 2026-03-14 14:31:59,457 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 15:32:34] 2026-03-14 14:31:59,462 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 15:32:34] 2026-03-14 14:32:02,539 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 15:32:34] 2026-03-14 14:32:07,064 | INFO     | job.realtimelogging is not enabled
[2026-03-14 15:32:34] 2026-03-14 14:32:08,070 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 15:32:34] 2026-03-14 14:32:27,146 | INFO     | PID=18929 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-14 15:32:34] 2026-03-14 14:32:27,147 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 15:32:34] 2026-03-14 14:32:27,147 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 15:32:34] 2026-03-14 14:32:27,147 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 15:32:34] 2026-03-14 14:32:28,285 | INFO     | [monitor] cgroup control has ended
[2026-03-14 15:32:34] 2026-03-14 14:32:29,459 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140337944164160)>', '<ExcThread(monitor, started 140337669752576)>']
[2026-03-14 15:32:34] 2026-03-14 14:32:30,163 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 15:32:34] 2026-03-14 14:32:30,163 | INFO     | [monitor] control thread has ended
[2026-03-14 15:32:34] 2026-03-14 14:32:34,485 | INFO     | all workflow threads have been joined
[2026-03-14 15:32:34] 2026-03-14 14:32:34,485 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 15:32:34] 2026-03-14 14:32:34,485 | INFO     | traces error code: 0
[2026-03-14 15:32:34] 2026-03-14 14:32:34,486 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 15:32:34] 2026-03-14 14:32:34,534 [wrapper] ==== pilot stdout END ====
[2026-03-14 15:32:34] 2026-03-14 14:32:34,537 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 15:32:34] 2026-03-14 14:32:34,539 [wrapper] pilotpid: 18929
[2026-03-14 15:32:34] 2026-03-14 14:32:34,541 [wrapper] Pilot exit status: 0
[2026-03-14 15:32:34] 2026-03-14 14:32:34,548 [wrapper] pandaids: 7054059560
[2026-03-14 15:32:34] 2026-03-14 14:32:34,564 [wrapper] cleanup supervisor_pilot   28531 18930
[2026-03-14 15:32:34] 2026-03-14 14:32:34,566 [wrapper] Test setup, not cleaning
[2026-03-14 15:32:34] 2026-03-14 14:32:34,568 [wrapper] apfmon messages muted
[2026-03-14 15:32:34] 2026-03-14 14:32:34,571 [wrapper] ==== wrapper stdout END ====
[2026-03-14 15:32:34] 2026-03-14 14:32:34,573 [wrapper] ==== wrapper stderr END ====
[2026-03-14 15:32:34]  *** Error codes and diagnostics ***
[2026-03-14 15:32:34]     "exeErrorCode": 0,
[2026-03-14 15:32:34]     "exeErrorDiag": "",
[2026-03-14 15:32:34]     "pilotErrorCode": 0,
[2026-03-14 15:32:34]     "pilotErrorDiag": "",
[2026-03-14 15:32:34]  *** Listing of results directory ***
[2026-03-14 15:32:34] total 405876
[2026-03-14 15:32:34] -rw-r--r-- 1 boinc boinc    585013 Mar 13 23:28 pilot3.tar.gz
[2026-03-14 15:32:34] -rwx------ 1 boinc boinc     36322 Mar 13 23:31 runpilot2-wrapper.sh
[2026-03-14 15:32:34] -rw-r--r-- 1 boinc boinc      5111 Mar 13 23:33 queuedata.json
[2026-03-14 15:32:34] -rw-r--r-- 1 boinc boinc       100 Mar 14 13:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 15:32:34] -rwxr-xr-x 1 boinc boinc      7986 Mar 14 13:54 run_atlas
[2026-03-14 15:32:34] -rw-r--r-- 1 boinc boinc       105 Mar 14 13:54 job.xml
[2026-03-14 15:32:34] -rw-r--r-- 2 boinc boinc 216697330 Mar 14 13:54 EVNT.48967083._000884.pool.root.1
[2026-03-14 15:32:34] drwxrwx--x 2 boinc boinc      4096 Mar 14 13:54 shared
[2026-03-14 15:32:34] -rw-r--r-- 2 boinc boinc    597517 Mar 14 13:54 input.tar.gz
[2026-03-14 15:32:34] -rw-r--r-- 2 boinc boinc     15845 Mar 14 13:54 start_atlas.sh
[2026-03-14 15:32:34] -rw-r--r-- 1 boinc boinc         0 Mar 14 13:54 boinc_setup_complete
[2026-03-14 15:32:34] -rw-r--r-- 1 boinc boinc      6441 Mar 14 13:54 init_data.xml
[2026-03-14 15:32:34] -rw-r--r-- 1 boinc boinc         0 Mar 14 13:54 boinc_lockfile
[2026-03-14 15:32:34] -rw-r--r-- 1 boinc boinc      2563 Mar 14 13:54 pandaJob.out
[2026-03-14 15:32:34] -rw------- 1 boinc boinc   1004579 Mar 14 13:54 agis_schedconf.cvmfs.json
[2026-03-14 15:32:34] -rw------- 1 boinc boinc   1511579 Mar 14 13:54 agis_ddmendpoints.agis.ALL.json
[2026-03-14 15:32:34] -rw------- 1 boinc boinc       420 Mar 14 13:54 workernode_map.json
[2026-03-14 15:32:34] drwx------ 5 boinc boinc      4096 Mar 14 13:54 pilot3
[2026-03-14 15:32:34] -rw------- 1 boinc boinc 192746657 Mar 14 15:31 HITS.48967085._021782.pool.root.1
[2026-03-14 15:32:34] -rw-r--r-- 1 boinc boinc       529 Mar 14 15:31 boinc_task_state.xml
[2026-03-14 15:32:34] -rw------- 1 boinc boinc      1021 Mar 14 15:31 memory_monitor_summary.json
[2026-03-14 15:32:34] -rw------- 1 boinc boinc        95 Mar 14 15:31 pilot_heartbeat.json
[2026-03-14 15:32:34] -rw------- 1 boinc boinc    277438 Mar 14 15:31 log.48967085._021782.job.log.tgz.1
[2026-03-14 15:32:34] -rw------- 1 boinc boinc      6310 Mar 14 15:31 heartbeat.json
[2026-03-14 15:32:34] -rw-r--r-- 1 boinc boinc      8192 Mar 14 15:32 boinc_mmap_file
[2026-03-14 15:32:34] -rw-r--r-- 1 boinc boinc        27 Mar 14 15:32 wrapper_checkpoint.txt
[2026-03-14 15:32:34] -rw------- 1 boinc boinc      4818 Mar 14 15:32 pilotlog.txt
[2026-03-14 15:32:34] -rw------- 1 boinc boinc    847620 Mar 14 15:32 log.48967085._021782.job.log.1
[2026-03-14 15:32:34] -rw------- 1 boinc boinc       357 Mar 14 15:32 output.list
[2026-03-14 15:32:34] -rw-r--r-- 1 boinc boinc       620 Mar 14 15:32 runtime_log
[2026-03-14 15:32:34] -rw------- 1 boinc boinc   1146880 Mar 14 15:32 result.tar.gz
[2026-03-14 15:32:34] -rw-r--r-- 1 boinc boinc      8911 Mar 14 15:32 runtime_log.err
[2026-03-14 15:32:34] -rw------- 1 boinc boinc       660 Mar 14 15:32 g1LODmNDQL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmNToLDmkPCZqn.diag
[2026-03-14 15:32:34] -rw-r--r-- 1 boinc boinc      6686 Mar 14 15:32 stderr.txt
[2026-03-14 15:32:34] HITS file was successfully produced:
[2026-03-14 15:32:34] -rw------- 1 boinc boinc 192746657 Mar 14 15:31 shared/HITS.pool.root.1
[2026-03-14 15:32:34]  *** Contents of shared directory: ***
[2026-03-14 15:32:34] total 401580
[2026-03-14 15:32:34] -rw-r--r-- 2 boinc boinc 216697330 Mar 14 13:54 ATLAS.root_0
[2026-03-14 15:32:34] -rw-r--r-- 2 boinc boinc    597517 Mar 14 13:54 input.tar.gz
[2026-03-14 15:32:34] -rw-r--r-- 2 boinc boinc     15845 Mar 14 13:54 start_atlas.sh
[2026-03-14 15:32:34] -rw------- 1 boinc boinc 192746657 Mar 14 15:31 HITS.pool.root.1
[2026-03-14 15:32:34] -rw------- 1 boinc boinc   1146880 Mar 14 15:32 result.tar.gz
15:32:35 (14883): run_atlas exited; CPU time 16613.195814
15:32:35 (14883): called boinc_finish(0)

</stderr_txt>
]]>

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