Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:07 (371462): wrapper (7.7.26015): starting
00:01:07 (371462): wrapper: running run_atlas (--nthreads 11)
[2026-03-14 00:01:07] Arguments: --nthreads 11
[2026-03-14 00:01:07] Threads: 11
[2026-03-14 00:01:07] Checking for CVMFS
[2026-03-14 00:01:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 00:01:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 00:01:07] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 00:01:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 00:01:08] 2.13.3.0 6634 113940 368048 157263 0 132 33867288 40960000 18445 16776704 0 230894571 99.588 242742211 38882 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-14 00:01:08] CVMFS is ok
[2026-03-14 00:01:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 00:01:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 00:01:08] Further information can be found at the LHC@home message board.
[2026-03-14 00:01:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 00:01:08] Checking for apptainer binary...
[2026-03-14 00:01:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 00:01:08] Running /usr/bin/apptainer --version
[2026-03-14 00:01:09] apptainer version 1.4.5-2.el9
[2026-03-14 00:01:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 00:01:09] c-206-37.aglt2.org
[2026-03-14 00:01:09] apptainer works
[2026-03-14 00:01:09] Set ATHENA_PROC_NUMBER=11
[2026-03-14 00:01:09] Set ATHENA_CORE_NUMBER=11
[2026-03-14 00:01:10] Starting ATLAS job with PandaID=7045240851
[2026-03-14 00:01:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 04:08:17]  *** The last 200 lines of the pilot log: ***
[2026-03-14 04:08:17] 2026-03-14 08:07:17,251 | INFO     | job 7045240851 has finished - writing final server update
[2026-03-14 04:08:17] 2026-03-14 08:07:17,251 | INFO     | total number of processed events: 400 (read)
[2026-03-14 04:08:17] 2026-03-14 08:07:17,407 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7045240851/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 04:08:17] 2026-03-14 08:07:17,408 | INFO     | extracted standard info from prmon json
[2026-03-14 04:08:17] 2026-03-14 08:07:17,408 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 04:08:17] 2026-03-14 08:07:17,408 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 04:08:17] 2026-03-14 08:07:17,425 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 04:08:17] 2026-03-14 08:07:17,425 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 04:08:17] 2026-03-14 08:07:17,453 | INFO     | fitting pss+swap vs Time
[2026-03-14 04:08:17] 2026-03-14 08:07:17,454 | INFO     | sum of square deviations: 4180330839.932766
[2026-03-14 04:08:17] 2026-03-14 08:07:17,455 | INFO     | sum of deviations: 108149732354.15964
[2026-03-14 04:08:17] 2026-03-14 08:07:17,455 | INFO     | mean x: 1773468346.9831932
[2026-03-14 04:08:17] 2026-03-14 08:07:17,455 | INFO     | mean y: 2522863.2899159663
[2026-03-14 04:08:17] 2026-03-14 08:07:17,455 | INFO     | intersect: -45879043550.695404
[2026-03-14 04:08:17] 2026-03-14 08:07:17,455 | INFO     | chi2: 9.03219116304403
[2026-03-14 04:08:17] 2026-03-14 08:07:17,485 | INFO     | sum of square deviations: 3922383890.223183
[2026-03-14 04:08:17] 2026-03-14 08:07:17,486 | INFO     | sum of deviations: 154018631737.75098
[2026-03-14 04:08:17] 2026-03-14 08:07:17,486 | INFO     | mean x: 1773468194.4892704
[2026-03-14 04:08:17] 2026-03-14 08:07:17,487 | INFO     | mean y: 2549743.3004291845
[2026-03-14 04:08:17] 2026-03-14 08:07:17,487 | INFO     | intersect: -69635494973.96844
[2026-03-14 04:08:17] 2026-03-14 08:07:17,487 | INFO     | chi2: 6.8665998767232805
[2026-03-14 04:08:17] 2026-03-14 08:07:17,487 | INFO     | current chi2=6.8665998767232805 (change=23.97636683312737 %)
[2026-03-14 04:08:17] 2026-03-14 08:07:17,487 | INFO     | right removable region: 232
[2026-03-14 04:08:17] 2026-03-14 08:07:17,487 | INFO     | sum of square deviations: 3922328136.2403517
[2026-03-14 04:08:17] 2026-03-14 08:07:17,519 | INFO     | sum of deviations: 25752268871.34764
[2026-03-14 04:08:17] 2026-03-14 08:07:17,519 | INFO     | mean x: 1773468499.4935622
[2026-03-14 04:08:17] 2026-03-14 08:07:17,519 | INFO     | mean y: 2571528.2317596567
[2026-03-14 04:08:17] 2026-03-14 08:07:17,519 | INFO     | intersect: -11641236956.797312
[2026-03-14 04:08:17] 2026-03-14 08:07:17,520 | INFO     | chi2: 4.570876204288311
[2026-03-14 04:08:17] 2026-03-14 08:07:17,520 | INFO     | current chi2=4.570876204288311 (change=49.393495755598764 %)
[2026-03-14 04:08:17] 2026-03-14 08:07:17,520 | INFO     | sum of square deviations: 3675177058.0
[2026-03-14 04:08:17] 2026-03-14 08:07:17,521 | INFO     | sum of deviations: -29600100782.0
[2026-03-14 04:08:17] 2026-03-14 08:07:17,522 | INFO     | mean x: 1773468652.0
[2026-03-14 04:08:17] 2026-03-14 08:07:17,522 | INFO     | mean y: 2605567.6447368423
[2026-03-14 04:08:17] 2026-03-14 08:07:17,522 | INFO     | intersect: 14286230548.010973
[2026-03-14 04:08:17] 2026-03-14 08:07:17,522 | INFO     | chi2: 2.533909587280868
[2026-03-14 04:08:17] 2026-03-14 08:07:17,522 | INFO     | current chi2=2.533909587280868 (change=44.5640294326151 %)
[2026-03-14 04:08:17] 2026-03-14 08:07:17,586 | INFO     | sum of square deviations: 3438616921.7219663
[2026-03-14 04:08:17] 2026-03-14 08:07:17,587 | INFO     | sum of deviations: -46319499534.237686
[2026-03-14 04:08:17] 2026-03-14 08:07:17,587 | INFO     | mean x: 1773468804.5112107
[2026-03-14 04:08:17] 2026-03-14 08:07:17,587 | INFO     | mean y: 2616337.6950672646
[2026-03-14 04:08:17] 2026-03-14 08:07:17,587 | INFO     | intersect: 23891926875.783592
[2026-03-14 04:08:17] 2026-03-14 08:07:17,588 | INFO     | chi2: 2.349051741906595
[2026-03-14 04:08:17] 2026-03-14 08:07:17,588 | INFO     | current chi2=2.349051741906595 (change=7.295360746183661 %)
[2026-03-14 04:08:17] 2026-03-14 08:07:17,588 | INFO     | left removable region: 30
[2026-03-14 04:08:17] 2026-03-14 08:07:17,588 | INFO     | sum of square deviations: 2555717525.504946
[2026-03-14 04:08:17] 2026-03-14 08:07:17,589 | INFO     | sum of deviations: -2181638822.742575
[2026-03-14 04:08:17] 2026-03-14 08:07:17,589 | INFO     | mean x: 1773469079.049505
[2026-03-14 04:08:17] 2026-03-14 08:07:17,621 | INFO     | mean y: 2648702.074257426
[2026-03-14 04:08:17] 2026-03-14 08:07:17,621 | INFO     | intersect: 1516536271.8765926
[2026-03-14 04:08:17] 2026-03-14 08:07:17,621 | INFO     | chi2: 0.0010522286846344645
[2026-03-14 04:08:17] 2026-03-14 08:07:17,621 | INFO     | current memory leak: -0.85 B/s (using 202 data points, chi2=0.00)
[2026-03-14 04:08:17] 2026-03-14 08:07:17,622 | INFO     | could have reported an average CPU frequency of 3285 MHz (12 samples)
[2026-03-14 04:08:17] 2026-03-14 08:07:17,622 | INFO     | ..............................
[2026-03-14 04:08:17] 2026-03-14 08:07:17,622 | INFO     | . Timing measurements:
[2026-03-14 04:08:17] 2026-03-14 08:07:17,622 | INFO     | . get job = 0 s
[2026-03-14 04:08:17] 2026-03-14 08:07:17,623 | INFO     | . initial setup = 53 s
[2026-03-14 04:08:17] 2026-03-14 08:07:17,623 | INFO     | . payload setup = 54 s
[2026-03-14 04:08:17] 2026-03-14 08:07:17,623 | INFO     | . stage-in = 1 s
[2026-03-14 04:08:17] 2026-03-14 08:07:17,623 | INFO     | . payload execution = 14537 s
[2026-03-14 04:08:17] 2026-03-14 08:07:17,623 | INFO     | . stage-out = 4 s
[2026-03-14 04:08:17] 2026-03-14 08:07:17,623 | INFO     | . log creation = 1 s
[2026-03-14 04:08:17] 2026-03-14 08:07:17,623 | INFO     | ..............................
[2026-03-14 04:08:17] 2026-03-14 08:07:18,825 | INFO     | 
[2026-03-14 04:08:17] 2026-03-14 08:07:18,826 | INFO     | job summary report
[2026-03-14 04:08:17] 2026-03-14 08:07:18,826 | INFO     | --------------------------------------------------
[2026-03-14 04:08:17] 2026-03-14 08:07:18,826 | INFO     | PanDA job id: 7045240851
[2026-03-14 04:08:17] 2026-03-14 08:07:18,826 | INFO     | task id: 48955010
[2026-03-14 04:08:17] 2026-03-14 08:07:18,826 | INFO     | errors: (none)
[2026-03-14 04:08:17] 2026-03-14 08:07:18,826 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 04:08:17] 2026-03-14 08:07:18,826 | INFO     | pilot state: finished 
[2026-03-14 04:08:17] 2026-03-14 08:07:18,826 | INFO     | transexitcode: 0
[2026-03-14 04:08:17] 2026-03-14 08:07:18,826 | INFO     | exeerrorcode: 0
[2026-03-14 04:08:17] 2026-03-14 08:07:18,826 | INFO     | exeerrordiag: 
[2026-03-14 04:08:17] 2026-03-14 08:07:18,827 | INFO     | exitcode: 0
[2026-03-14 04:08:17] 2026-03-14 08:07:18,827 | INFO     | exitmsg: OK
[2026-03-14 04:08:17] 2026-03-14 08:07:18,827 | INFO     | cpuconsumptiontime: 30488 s
[2026-03-14 04:08:17] 2026-03-14 08:07:18,827 | INFO     | nevents: 400
[2026-03-14 04:08:17] 2026-03-14 08:07:18,827 | INFO     | neventsw: 0
[2026-03-14 04:08:17] 2026-03-14 08:07:18,827 | INFO     | pid: 391162
[2026-03-14 04:08:17] 2026-03-14 08:07:18,827 | INFO     | pgrp: 391162
[2026-03-14 04:08:17] 2026-03-14 08:07:18,827 | INFO     | corecount: 11
[2026-03-14 04:08:17] 2026-03-14 08:07:18,827 | INFO     | event service: False
[2026-03-14 04:08:17] 2026-03-14 08:07:18,827 | INFO     | sizes: {0: 2279091, 1: 2279776, 2: 2279776, 3: 2279776, 4: 2280265, 5: 2280265, 14596: 2311172, 14597: 2311171, 14603: 2320225, 14607: 2320309, 14611: 2320503}
[2026-03-14 04:08:17] 2026-03-14 08:07:18,827 | INFO     | --------------------------------------------------
[2026-03-14 04:08:17] 2026-03-14 08:07:18,827 | INFO     | 
[2026-03-14 04:08:17] 2026-03-14 08:07:18,827 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-03-14 04:08:17] 2026-03-14 08:07:19,157 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 04:08:17] 2026-03-14 08:07:19,157 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 04:08:17] 2026-03-14 08:07:19,157 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 04:08:17] 2026-03-14 08:07:19,157 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 04:08:17] 2026-03-14 08:07:19,157 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 04:08:17] 2026-03-14 08:07:19,157 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 04:08:17] 2026-03-14 08:07:19,157 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 04:08:17] 2026-03-14 08:07:19,157 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 04:08:17] 2026-03-14 08:07:19,157 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 04:08:17] 2026-03-14 08:07:19,158 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 04:08:17] 2026-03-14 08:07:19,158 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 04:08:17] 2026-03-14 08:07:19,158 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 04:08:17] 2026-03-14 08:07:19,158 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 04:08:17] 2026-03-14 08:07:19,158 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 04:08:17] 2026-03-14 08:07:19,158 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 04:08:17] 2026-03-14 08:07:19,158 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 04:08:17] 2026-03-14 08:07:19,158 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 04:08:17] 2026-03-14 08:07:19,158 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 04:08:17] 2026-03-14 08:07:19,158 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 04:08:17] 2026-03-14 08:07:19,158 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 04:08:17] 2026-03-14 08:07:19,158 | INFO     | job 7045240851 has completed (purged errors)
[2026-03-14 04:08:17] 2026-03-14 08:07:19,159 | INFO     | overall cleanup function is called
[2026-03-14 04:08:17] 2026-03-14 08:07:19,919 | INFO     | PID=377403 has CPU usage=11.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 04:08:17] 2026-03-14 08:07:19,919 | INFO     | .. there are 26 such processes running
[2026-03-14 04:08:17] 2026-03-14 08:07:20,199 | INFO     | --- collectZombieJob: --- 10, [391162]
[2026-03-14 04:08:17] 2026-03-14 08:07:20,199 | INFO     | zombie collector waiting for pid 391162
[2026-03-14 04:08:17] 2026-03-14 08:07:20,199 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 04:08:17] 2026-03-14 08:07:20,199 | INFO     | collected zombie processes
[2026-03-14 04:08:17] 2026-03-14 08:07:20,199 | INFO     | will attempt to kill all subprocesses of pid=391162
[2026-03-14 04:08:17] 2026-03-14 08:07:23,313 | INFO     | process IDs to be killed: [391162] (in reverse order)
[2026-03-14 04:08:17] 2026-03-14 08:07:24,640 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 04:08:17] 2026-03-14 08:07:24,651 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 04:08:17] 2026-03-14 08:07:24,699 | INFO     | did not find any defunct processes belonging to 391162
[2026-03-14 04:08:17] 2026-03-14 08:07:24,801 | INFO     | did not find any defunct processes belonging to 391162
[2026-03-14 04:08:17] 2026-03-14 08:07:24,801 | INFO     | ready for new job
[2026-03-14 04:08:17] 2026-03-14 08:07:24,801 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 04:08:17] 2026-03-14 08:07:24,803 | INFO     | **************************************
[2026-03-14 04:08:17] 2026-03-14 08:07:24,803 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 04:08:17] 2026-03-14 08:07:24,803 | INFO     | **************************************
[2026-03-14 04:08:17] 2026-03-14 08:07:24,803 | INFO     | 
[2026-03-14 04:08:17] 2026-03-14 08:07:24,852 | INFO     | architecture information:
[2026-03-14 04:08:17] 2026-03-14 08:07:24,877 | INFO     | executing command: cat /etc/os-release
[2026-03-14 04:08:17] 2026-03-14 08:07:25,051 | INFO     | cat /etc/os-release:
[2026-03-14 04:08:17] NAME="CentOS Linux"
[2026-03-14 04:08:17] VERSION="7 (Core)"
[2026-03-14 04:08:17] ID="centos"
[2026-03-14 04:08:17] ID_LIKE="rhel fedora"
[2026-03-14 04:08:17] VERSION_ID="7"
[2026-03-14 04:08:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 04:08:17] ANSI_COLOR="0;31"
[2026-03-14 04:08:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 04:08:17] HOME_URL="https://www.centos.org/"
[2026-03-14 04:08:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 04:08:17] 
[2026-03-14 04:08:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 04:08:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 04:08:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 04:08:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 04:08:17] 
[2026-03-14 04:08:17] 2026-03-14 08:07:25,052 | INFO     | **************************************
[2026-03-14 04:08:17] 2026-03-14 08:07:25,556 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-03-14 04:08:17] 2026-03-14 08:07:25,758 | INFO     | sufficient remaining disk space (81523638272 B)
[2026-03-14 04:08:17] 2026-03-14 08:07:25,758 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 04:08:17] 2026-03-14 08:07:25,758 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 04:08:17] 2026-03-14 08:07:25,758 | INFO     | update_server=False
[2026-03-14 04:08:17] 2026-03-14 08:07:25,758 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 04:08:17] 2026-03-14 08:07:25,760 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 04:08:17] 2026-03-14 08:07:25,782 | INFO     | all data control threads have been joined
[2026-03-14 04:08:17] 2026-03-14 08:07:25,867 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 04:08:17] 2026-03-14 08:07:25,950 | INFO     | all job control threads have been joined
[2026-03-14 04:08:17] 2026-03-14 08:07:26,286 | INFO     | all payload control threads have been joined
[2026-03-14 04:08:17] 2026-03-14 08:07:26,290 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 04:08:17] 2026-03-14 08:07:26,290 | INFO     | aborting loop
[2026-03-14 04:08:17] 2026-03-14 08:07:26,765 | INFO     | [job] retrieve thread has finished
[2026-03-14 04:08:17] 2026-03-14 08:07:26,792 | INFO     | [data] control thread has finished
[2026-03-14 04:08:17] 2026-03-14 08:07:26,868 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 04:08:17] 2026-03-14 08:07:26,976 | INFO     | [job] control thread has finished
[2026-03-14 04:08:17] 2026-03-14 08:07:27,293 | INFO     | [payload] control thread has finished
[2026-03-14 04:08:17] 2026-03-14 08:07:27,296 | INFO     | [job] job monitor thread has finished
[2026-03-14 04:08:17] 2026-03-14 08:07:27,627 | INFO     | [payload] failed_post thread has finished
[2026-03-14 04:08:17] 2026-03-14 08:07:27,717 | INFO     | [data] copytool_in thread has finished
[2026-03-14 04:08:17] 2026-03-14 08:07:27,721 | INFO     | [job] validate thread has finished
[2026-03-14 04:08:17] 2026-03-14 08:07:27,807 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 04:08:17] 2026-03-14 08:07:27,874 | INFO     | [data] copytool_out thread has finished
[2026-03-14 04:08:17] 2026-03-14 08:07:27,878 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 04:08:17] 2026-03-14 08:07:28,056 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 04:08:17] 2026-03-14 08:07:28,264 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 04:08:17] 2026-03-14 08:07:28,352 | INFO     | [payload] validate_post thread has finished
[2026-03-14 04:08:17] 2026-03-14 08:07:28,884 | INFO     | [job] queue monitor thread has finished
[2026-03-14 04:08:17] 2026-03-14 08:07:29,768 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 04:08:17] 2026-03-14 08:07:53,158 | INFO     | PID=377403 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-14 04:08:17] 2026-03-14 08:07:53,158 | INFO     | .. there are 26 such processes running
[2026-03-14 04:08:17] 2026-03-14 08:07:53,166 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 04:08:17] 2026-03-14 08:07:53,167 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 04:08:17] 2026-03-14 08:07:53,167 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 04:08:17] 2026-03-14 08:08:07,141 | INFO     | [monitor] cgroup control has ended
[2026-03-14 04:08:17] 2026-03-14 08:08:08,733 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139986237065024)>', '<ExcThread(monitor, started 139985793574656)>']
[2026-03-14 04:08:17] 2026-03-14 08:08:09,272 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 04:08:17] 2026-03-14 08:08:09,273 | INFO     | [monitor] control thread has ended
[2026-03-14 04:08:17] 2026-03-14 08:08:13,759 | INFO     | all workflow threads have been joined
[2026-03-14 04:08:17] 2026-03-14 08:08:13,759 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 04:08:17] 2026-03-14 08:08:13,759 | INFO     | traces error code: 0
[2026-03-14 04:08:17] 2026-03-14 08:08:13,759 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 04:08:17] 2026-03-14 08:08:14,741 [wrapper] ==== pilot stdout END ====
[2026-03-14 04:08:17] 2026-03-14 08:08:14,814 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 04:08:17] 2026-03-14 08:08:14,852 [wrapper] pilotpid: 377403
[2026-03-14 04:08:17] 2026-03-14 08:08:14,912 [wrapper] Pilot exit status: 0
[2026-03-14 04:08:17] 2026-03-14 08:08:15,260 [wrapper] pandaids: 7045240851
[2026-03-14 04:08:17] 2026-03-14 08:08:16,165 [wrapper] cleanup supervisor_pilot  840797 377404
[2026-03-14 04:08:17] 2026-03-14 08:08:16,200 [wrapper] Test setup, not cleaning
[2026-03-14 04:08:17] 2026-03-14 08:08:16,244 [wrapper] apfmon messages muted
[2026-03-14 04:08:17] 2026-03-14 08:08:16,273 [wrapper] ==== wrapper stdout END ====
[2026-03-14 04:08:17] 2026-03-14 08:08:16,309 [wrapper] ==== wrapper stderr END ====
[2026-03-14 04:08:17]  *** Error codes and diagnostics ***
[2026-03-14 04:08:17]     "exeErrorCode": 0,
[2026-03-14 04:08:17]     "exeErrorDiag": "",
[2026-03-14 04:08:17]     "pilotErrorCode": 0,
[2026-03-14 04:08:17]     "pilotErrorDiag": "",
[2026-03-14 04:08:17]  *** Listing of results directory ***
[2026-03-14 04:08:17] total 617984
[2026-03-14 04:08:17] -rw-r--r--. 1 boincer umatlas    585013 Mar 13 18:28 pilot3.tar.gz
[2026-03-14 04:08:17] -rwx------. 1 boincer umatlas     36322 Mar 13 18:28 runpilot2-wrapper.sh
[2026-03-14 04:08:17] -rw-r--r--. 1 boincer umatlas      5111 Mar 13 18:30 queuedata.json
[2026-03-14 04:08:17] -rw-r--r--. 1 boincer umatlas       100 Mar 14 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 04:08:17] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 14 00:01 run_atlas
[2026-03-14 04:08:17] -rw-r--r--. 1 boincer umatlas       105 Mar 14 00:01 job.xml
[2026-03-14 04:08:17] -rw-r--r--. 2 boincer umatlas 440350039 Mar 14 00:01 EVNT.46701403._001683.pool.root.1
[2026-03-14 04:08:17] -rw-r--r--. 2 boincer umatlas     15845 Mar 14 00:01 start_atlas.sh
[2026-03-14 04:08:17] drwxrwx--x. 2 boincer umatlas      4096 Mar 14 00:01 shared
[2026-03-14 04:08:17] -rw-r--r--. 2 boincer umatlas    597530 Mar 14 00:01 input.tar.gz
[2026-03-14 04:08:17] -rw-r--r--. 1 boincer umatlas         0 Mar 14 00:01 boinc_lockfile
[2026-03-14 04:08:17] -rw-r--r--. 1 boincer umatlas      2564 Mar 14 00:01 pandaJob.out
[2026-03-14 04:08:17] -rw-------. 1 boincer umatlas        57 Mar 14 00:01 setup.sh.local
[2026-03-14 04:08:17] -rw-------. 1 boincer umatlas   1004579 Mar 14 00:02 agis_schedconf.cvmfs.json
[2026-03-14 04:08:17] -rw-------. 1 boincer umatlas       429 Mar 14 00:03 workernode_map.json
[2026-03-14 04:08:17] drwx------. 5 boincer umatlas      4096 Mar 14 00:03 pilot3
[2026-03-14 04:08:17] -rw-r--r--. 1 boincer umatlas      6909 Mar 14 04:01 init_data.xml
[2026-03-14 04:08:17] -rw-------. 1 boincer umatlas 183841918 Mar 14 04:03 HITS.48955010._034465.pool.root.1
[2026-03-14 04:08:17] -rw-r--r--. 1 boincer umatlas       532 Mar 14 04:04 boinc_task_state.xml
[2026-03-14 04:08:17] -rw-------. 1 boincer umatlas      1043 Mar 14 04:06 memory_monitor_summary.json
[2026-03-14 04:08:17] -rw-------. 1 boincer umatlas   1511579 Mar 14 04:07 agis_ddmendpoints.agis.ALL.json
[2026-03-14 04:08:17] -rw-------. 1 boincer umatlas    520532 Mar 14 04:07 log.48955010._034465.job.log.tgz.1
[2026-03-14 04:08:17] -rw-------. 1 boincer umatlas      6341 Mar 14 04:07 heartbeat.json
[2026-03-14 04:08:17] -rw-------. 1 boincer umatlas        95 Mar 14 04:07 pilot_heartbeat.json
[2026-03-14 04:08:17] -rw-r--r--. 1 boincer umatlas      8192 Mar 14 04:07 boinc_mmap_file
[2026-03-14 04:08:17] -rw-r--r--. 1 boincer umatlas        28 Mar 14 04:07 wrapper_checkpoint.txt
[2026-03-14 04:08:17] -rw-------. 1 boincer umatlas      4819 Mar 14 04:08 pilotlog.txt
[2026-03-14 04:08:17] -rw-------. 1 boincer umatlas   1820358 Mar 14 04:08 log.48955010._034465.job.log.1
[2026-03-14 04:08:17] -rw-------. 1 boincer umatlas       357 Mar 14 04:08 output.list
[2026-03-14 04:08:17] -rw-r--r--. 1 boincer umatlas       620 Mar 14 04:08 runtime_log
[2026-03-14 04:08:17] -rw-------. 1 boincer umatlas   2355200 Mar 14 04:08 result.tar.gz
[2026-03-14 04:08:17] -rw-r--r--. 1 boincer umatlas      9344 Mar 14 04:08 runtime_log.err
[2026-03-14 04:08:17] -rw-------. 1 boincer umatlas       656 Mar 14 04:08 3igMDmrAQL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmgQoLDmPHa6in.diag
[2026-03-14 04:08:17] -rw-r--r--. 1 boincer umatlas     21269 Mar 14 04:08 stderr.txt
[2026-03-14 04:08:17] HITS file was successfully produced:
[2026-03-14 04:08:17] -rw-------. 1 boincer umatlas 183841918 Mar 14 04:03 shared/HITS.pool.root.1
[2026-03-14 04:08:17]  *** Contents of shared directory: ***
[2026-03-14 04:08:17] total 612476
[2026-03-14 04:08:17] -rw-r--r--. 2 boincer umatlas 440350039 Mar 14 00:01 ATLAS.root_0
[2026-03-14 04:08:17] -rw-r--r--. 2 boincer umatlas     15845 Mar 14 00:01 start_atlas.sh
[2026-03-14 04:08:17] -rw-r--r--. 2 boincer umatlas    597530 Mar 14 00:01 input.tar.gz
[2026-03-14 04:08:17] -rw-------. 1 boincer umatlas 183841918 Mar 14 04:03 HITS.pool.root.1
[2026-03-14 04:08:17] -rw-------. 1 boincer umatlas   2355200 Mar 14 04:08 result.tar.gz
04:08:18 (371462): run_atlas exited; CPU time 30766.164881
04:08:18 (371462): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN