Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:47:48 (201941): wrapper (7.7.26015): starting
13:47:48 (201941): wrapper: running run_atlas (--nthreads 4)
[2026-03-14 13:47:48] Arguments: --nthreads 4
[2026-03-14 13:47:48] Threads: 4
[2026-03-14 13:47:48] Checking for CVMFS
[2026-03-14 13:47:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 13:47:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 13:47:49] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 13:47:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 13:47:49] 2.9.2.0 79673 24274 105552 157278 0 50 30769376 36864000 0 130560 0 11345273 99.985 922303 10482 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-14 13:47:49] CVMFS is ok
[2026-03-14 13:47:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 13:47:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 13:47:49] Further information can be found at the LHC@home message board.
[2026-03-14 13:47:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 13:47:49] Checking for apptainer binary...
[2026-03-14 13:47:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 13:47:49] Running /usr/bin/apptainer --version
[2026-03-14 13:47:49] apptainer version 1.4.1-1.1
[2026-03-14 13:47:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 13:47:49] thA309
[2026-03-14 13:47:49] apptainer works
[2026-03-14 13:47:49] Set ATHENA_PROC_NUMBER=4
[2026-03-14 13:47:49] Set ATHENA_CORE_NUMBER=4
[2026-03-14 13:47:49] Starting ATLAS job with PandaID=7054059788
[2026-03-14 13:47:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 15:17:16]  *** The last 200 lines of the pilot log: ***
[2026-03-14 15:17:16] 2026-03-14 14:16:43,135 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 15:17:16] 2026-03-14 14:16:43,534 | INFO     | [job] retrieve thread has finished
[2026-03-14 15:17:16] 2026-03-14 14:16:43,534 | INFO     | [job] queue monitor thread has finished
[2026-03-14 15:17:16] 2026-03-14 14:16:43,534 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 15:17:16] 2026-03-14 14:16:43,556 | INFO     | [job] control thread has finished
[2026-03-14 15:17:16] 2026-03-14 14:16:43,594 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 15:17:16] 2026-03-14 14:16:43,657 | INFO     | [data] control thread has finished
[2026-03-14 15:17:16] 2026-03-14 14:16:43,664 | INFO     | [data] copytool_in thread has finished
[2026-03-14 15:17:16] 2026-03-14 14:16:43,811 | INFO     | all payload control threads have been joined
[2026-03-14 15:17:16] 2026-03-14 14:16:43,845 | INFO     | [job] job monitor thread has finished
[2026-03-14 15:17:16] 2026-03-14 14:16:44,330 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 15:17:16] 2026-03-14 14:16:44,398 | INFO     | [payload] failed_post thread has finished
[2026-03-14 15:17:16] 2026-03-14 14:16:44,440 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 15:17:16] 2026-03-14 14:16:44,817 | INFO     | [payload] control thread has finished
[2026-03-14 15:17:16] 2026-03-14 14:16:44,819 | INFO     | [job] validate thread has finished
[2026-03-14 15:17:16] 2026-03-14 14:16:44,978 | INFO     | [payload] validate_post thread has finished
[2026-03-14 15:17:16] 2026-03-14 14:16:45,141 | INFO     | [data] copytool_out thread has finished
[2026-03-14 15:17:16] 2026-03-14 14:16:48,447 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 15:17:16] 2026-03-14 14:16:52,916 | INFO     | job.realtimelogging is not enabled
[2026-03-14 15:17:16] 2026-03-14 14:16:53,922 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 15:17:16] 2026-03-14 14:17:08,772 | INFO     | [monitor] cgroup control has ended
[2026-03-14 15:17:16] 2026-03-14 14:17:10,780 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140589563582272)>', '<ExcThread(monitor, started 140588590536448)>']
[2026-03-14 15:17:16] 2026-03-14 14:17:13,018 | INFO     | PID=206047 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-14 15:17:16] 2026-03-14 14:17:13,018 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 15:17:16] 2026-03-14 14:17:13,018 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 15:17:16] 2026-03-14 14:17:13,018 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 15:17:16] 2026-03-14 14:17:13,018 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 15:17:16] 2026-03-14 14:17:13,018 | INFO     | [monitor] control thread has ended
[2026-03-14 15:17:16] 2026-03-14 14:17:15,806 | INFO     | all workflow threads have been joined
[2026-03-14 15:17:16] 2026-03-14 14:17:15,806 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 15:17:16] 2026-03-14 14:17:15,806 | INFO     | traces error code: 0
[2026-03-14 15:17:16] 2026-03-14 14:17:15,806 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 15:17:16] 2026-03-14 14:17:15,898 [wrapper] ==== pilot stdout END ====
[2026-03-14 15:17:16] 2026-03-14 14:17:15,902 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 15:17:16] 2026-03-14 14:17:15,906 [wrapper] pilotpid: 206047
[2026-03-14 15:17:16] 2026-03-14 14:17:15,910 [wrapper] Pilot exit status: 0
[2026-03-14 15:17:16] 2026-03-14 14:17:15,923 [wrapper] pandaids: 7054059788
[2026-03-14 15:17:16] 2026-03-14 14:17:15,948 [wrapper] cleanup supervisor_pilot  216697 206048
[2026-03-14 15:17:16] 2026-03-14 14:17:15,952 [wrapper] Test setup, not cleaning
[2026-03-14 15:17:16] 2026-03-14 14:17:15,956 [wrapper] apfmon messages muted
[2026-03-14 15:17:16] 2026-03-14 14:17:15,960 [wrapper] ==== wrapper stdout END ====
[2026-03-14 15:17:16] 2026-03-14 14:17:15,964 [wrapper] ==== wrapper stderr END ====
[2026-03-14 15:17:16]  *** Error codes and diagnostics ***
[2026-03-14 15:17:16]     "exeErrorCode": 0,
[2026-03-14 15:17:16]     "exeErrorDiag": "",
[2026-03-14 15:17:16]     "pilotErrorCode": 0,
[2026-03-14 15:17:16]     "pilotErrorDiag": "",
[2026-03-14 15:17:16]  *** Listing of results directory ***
[2026-03-14 15:17:16] total 404776
[2026-03-14 15:17:16] -rw-r--r-- 1 boinc boinc    585013 Mar 13 23:28 pilot3.tar.gz
[2026-03-14 15:17:16] -rwx------ 1 boinc boinc     36322 Mar 13 23:28 runpilot2-wrapper.sh
[2026-03-14 15:17:16] -rw-r--r-- 1 boinc boinc      5111 Mar 13 23:30 queuedata.json
[2026-03-14 15:17:16] -rw-r--r-- 1 boinc boinc       100 Mar 14 13:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 15:17:16] -rwxr-xr-x 1 boinc boinc      7986 Mar 14 13:47 run_atlas
[2026-03-14 15:17:16] -rw-r--r-- 1 boinc boinc       105 Mar 14 13:47 job.xml
[2026-03-14 15:17:16] -rw-r--r-- 2 boinc boinc 211415027 Mar 14 13:47 EVNT.48967083._000894.pool.root.1
[2026-03-14 15:17:16] -rw-r--r-- 2 boinc boinc    597521 Mar 14 13:47 input.tar.gz
[2026-03-14 15:17:16] -rw-r--r-- 2 boinc boinc     15845 Mar 14 13:47 start_atlas.sh
[2026-03-14 15:17:16] drwxrwx--x 2 boinc boinc      4096 Mar 14 13:47 shared
[2026-03-14 15:17:16] -rw-r--r-- 1 boinc boinc         0 Mar 14 13:47 boinc_setup_complete
[2026-03-14 15:17:16] -rw-r--r-- 1 boinc boinc      6376 Mar 14 13:47 init_data.xml
[2026-03-14 15:17:16] -rw-r--r-- 1 boinc boinc         0 Mar 14 13:47 boinc_lockfile
[2026-03-14 15:17:16] -rw-r--r-- 1 boinc boinc      2562 Mar 14 13:47 pandaJob.out
[2026-03-14 15:17:16] -rw------- 1 boinc boinc   1004579 Mar 14 13:47 agis_schedconf.cvmfs.json
[2026-03-14 15:17:16] -rw------- 1 boinc boinc   1511579 Mar 14 13:47 agis_ddmendpoints.agis.ALL.json
[2026-03-14 15:17:16] -rw------- 1 boinc boinc       427 Mar 14 13:48 workernode_map.json
[2026-03-14 15:17:16] drwx------ 5 boinc boinc      4096 Mar 14 13:48 pilot3
[2026-03-14 15:17:16] -rw------- 1 boinc boinc 197083454 Mar 14 15:16 HITS.48967085._022010.pool.root.1
[2026-03-14 15:17:16] -rw-r--r-- 1 boinc boinc       529 Mar 14 15:16 boinc_task_state.xml
[2026-03-14 15:17:16] -rw------- 1 boinc boinc        95 Mar 14 15:16 pilot_heartbeat.json
[2026-03-14 15:17:16] -rw------- 1 boinc boinc      1032 Mar 14 15:16 memory_monitor_summary.json
[2026-03-14 15:17:16] -rw------- 1 boinc boinc    259495 Mar 14 15:16 log.48967085._022010.job.log.tgz.1
[2026-03-14 15:17:16] -rw------- 1 boinc boinc      6313 Mar 14 15:16 heartbeat.json
[2026-03-14 15:17:16] -rw-r--r-- 1 boinc boinc        27 Mar 14 15:17 wrapper_checkpoint.txt
[2026-03-14 15:17:16] -rw-r--r-- 1 boinc boinc      8192 Mar 14 15:17 boinc_mmap_file
[2026-03-14 15:17:16] -rw------- 1 boinc boinc      5005 Mar 14 15:17 pilotlog.txt
[2026-03-14 15:17:16] -rw------- 1 boinc boinc    773951 Mar 14 15:17 log.48967085._022010.job.log.1
[2026-03-14 15:17:16] -rw------- 1 boinc boinc       357 Mar 14 15:17 output.list
[2026-03-14 15:17:16] -rw-r--r-- 1 boinc boinc       620 Mar 14 15:17 runtime_log
[2026-03-14 15:17:16] -rw------- 1 boinc boinc   1054720 Mar 14 15:17 result.tar.gz
[2026-03-14 15:17:16] -rw-r--r-- 1 boinc boinc      8896 Mar 14 15:17 runtime_log.err
[2026-03-14 15:17:16] -rw------- 1 boinc boinc       657 Mar 14 15:17 m7dMDmpAQL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmv2qLDmVTWbBn.diag
[2026-03-14 15:17:16] -rw-r--r-- 1 boinc boinc      6757 Mar 14 15:17 stderr.txt
[2026-03-14 15:17:16] HITS file was successfully produced:
[2026-03-14 15:17:16] -rw------- 1 boinc boinc 197083454 Mar 14 15:16 shared/HITS.pool.root.1
[2026-03-14 15:17:16]  *** Contents of shared directory: ***
[2026-03-14 15:17:16] total 400568
[2026-03-14 15:17:16] -rw-r--r-- 2 boinc boinc 211415027 Mar 14 13:47 ATLAS.root_0
[2026-03-14 15:17:16] -rw-r--r-- 2 boinc boinc    597521 Mar 14 13:47 input.tar.gz
[2026-03-14 15:17:16] -rw-r--r-- 2 boinc boinc     15845 Mar 14 13:47 start_atlas.sh
[2026-03-14 15:17:16] -rw------- 1 boinc boinc 197083454 Mar 14 15:16 HITS.pool.root.1
[2026-03-14 15:17:16] -rw------- 1 boinc boinc   1054720 Mar 14 15:17 result.tar.gz
15:17:17 (201941): run_atlas exited; CPU time 19884.528435
15:17:17 (201941): called boinc_finish(0)

</stderr_txt>
]]>

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