Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:38 (674547): wrapper (7.7.26015): starting
00:00:38 (674547): wrapper: running run_atlas (--nthreads 12)
[2026-03-14 00:00:38] Arguments: --nthreads 12
[2026-03-14 00:00:38] Threads: 12
[2026-03-14 00:00:38] Checking for CVMFS
[2026-03-14 00:00:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 00:00:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 00:00:40] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 00:00:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 00:00:42] 2.13.3.0 9944 112869 210984 157263 3 96 26826366 39288833 12782 16776704 0 110323930 99.439 182877033 35834 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-14 00:00:42] CVMFS is ok
[2026-03-14 00:00:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 00:00:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 00:00:42] Further information can be found at the LHC@home message board.
[2026-03-14 00:00:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 00:00:42] Checking for apptainer binary...
[2026-03-14 00:00:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 00:00:42] Running /usr/bin/apptainer --version
[2026-03-14 00:00:44] apptainer version 1.4.5-2.el9
[2026-03-14 00:00:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 00:00:46] c-210-10.aglt2.org
[2026-03-14 00:00:46] apptainer works
[2026-03-14 00:00:46] Set ATHENA_PROC_NUMBER=12
[2026-03-14 00:00:46] Set ATHENA_CORE_NUMBER=12
[2026-03-14 00:00:46] Starting ATLAS job with PandaID=7045945878
[2026-03-14 00:00:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 05:05:29]  *** The last 200 lines of the pilot log: ***
[2026-03-14 05:05:29] 2026-03-14 09:04:23,898 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 05:05:29] 2026-03-14 09:04:23,966 | INFO     | fitting pss+swap vs Time
[2026-03-14 05:05:29] 2026-03-14 09:04:23,966 | INFO     | sum of square deviations: 7878696121.999991
[2026-03-14 05:05:29] 2026-03-14 09:04:23,969 | INFO     | sum of deviations: 263965774271.57117
[2026-03-14 05:05:29] 2026-03-14 09:04:23,969 | INFO     | mean x: 1773470104.2857144
[2026-03-14 05:05:29] 2026-03-14 09:04:23,969 | INFO     | mean y: 2598271.6598639456
[2026-03-14 05:05:29] 2026-03-14 09:04:23,969 | INFO     | intersect: -59415280267.667206
[2026-03-14 05:05:29] 2026-03-14 09:04:23,970 | INFO     | chi2: 7.555005436943279
[2026-03-14 05:05:29] 2026-03-14 09:04:23,971 | INFO     | sum of square deviations: 7483531256.359903
[2026-03-14 05:05:29] 2026-03-14 09:04:23,973 | INFO     | sum of deviations: 278763558040.71625
[2026-03-14 05:05:29] 2026-03-14 09:04:23,973 | INFO     | mean x: 1773469951.799308
[2026-03-14 05:05:29] 2026-03-14 09:04:23,973 | INFO     | mean y: 2603873.581314879
[2026-03-14 05:05:29] 2026-03-14 09:04:23,973 | INFO     | intersect: -66059630238.38597
[2026-03-14 05:05:29] 2026-03-14 09:04:23,974 | INFO     | chi2: 6.860963274780817
[2026-03-14 05:05:29] 2026-03-14 09:04:23,974 | INFO     | current chi2=6.860963274780817 (change=9.186521015175721 %)
[2026-03-14 05:05:29] 2026-03-14 09:04:23,974 | INFO     | right removable region: 288
[2026-03-14 05:05:29] 2026-03-14 09:04:23,974 | INFO     | sum of square deviations: 7483408036.954975
[2026-03-14 05:05:29] 2026-03-14 09:04:23,977 | INFO     | sum of deviations: 159662178468.90314
[2026-03-14 05:05:29] 2026-03-14 09:04:23,977 | INFO     | mean x: 1773470256.7958477
[2026-03-14 05:05:29] 2026-03-14 09:04:23,977 | INFO     | mean y: 2638481.2525951555
[2026-03-14 05:05:29] 2026-03-14 09:04:23,977 | INFO     | intersect: -37835218715.83369
[2026-03-14 05:05:29] 2026-03-14 09:04:23,978 | INFO     | chi2: 3.234205738410666
[2026-03-14 05:05:29] 2026-03-14 09:04:23,978 | INFO     | current chi2=3.234205738410666 (change=57.191218915664855 %)
[2026-03-14 05:05:29] 2026-03-14 09:04:23,978 | INFO     | sum of square deviations: 7101649842.323945
[2026-03-14 05:05:29] 2026-03-14 09:04:23,980 | INFO     | sum of deviations: 93237841901.36633
[2026-03-14 05:05:29] 2026-03-14 09:04:23,981 | INFO     | mean x: 1773470409.2887323
[2026-03-14 05:05:29] 2026-03-14 09:04:23,981 | INFO     | mean y: 2664965.73943662
[2026-03-14 05:05:29] 2026-03-14 09:04:23,981 | INFO     | intersect: -23281298241.309307
[2026-03-14 05:05:29] 2026-03-14 09:04:23,981 | INFO     | chi2: 1.6023288349668696
[2026-03-14 05:05:29] 2026-03-14 09:04:23,982 | INFO     | current chi2=1.6023288349668696 (change=50.45680564050089 %)
[2026-03-14 05:05:29] 2026-03-14 09:04:23,982 | INFO     | sum of square deviations: 6733136332.774209
[2026-03-14 05:05:29] 2026-03-14 09:04:23,984 | INFO     | sum of deviations: 62744222591.41939
[2026-03-14 05:05:29] 2026-03-14 09:04:23,984 | INFO     | mean x: 1773470561.7741935
[2026-03-14 05:05:29] 2026-03-14 09:04:23,984 | INFO     | mean y: 2677572.53046595
[2026-03-14 05:05:29] 2026-03-14 09:04:23,985 | INFO     | intersect: -16523800756.097359
[2026-03-14 05:05:29] 2026-03-14 09:04:23,985 | INFO     | chi2: 1.3080787967183687
[2026-03-14 05:05:29] 2026-03-14 09:04:23,985 | INFO     | current chi2=1.3080787967183687 (change=18.36389833517444 %)
[2026-03-14 05:05:29] 2026-03-14 09:04:23,985 | INFO     | left removable region: 30
[2026-03-14 05:05:29] 2026-03-14 09:04:23,986 | INFO     | sum of square deviations: 5324349454.124045
[2026-03-14 05:05:29] 2026-03-14 09:04:23,988 | INFO     | sum of deviations: 12789036357.54264
[2026-03-14 05:05:29] 2026-03-14 09:04:23,988 | INFO     | mean x: 1773470836.2480621
[2026-03-14 05:05:29] 2026-03-14 09:04:23,988 | INFO     | mean y: 2715741.085271318
[2026-03-14 05:05:29] 2026-03-14 09:04:23,988 | INFO     | intersect: -4257144209.7393613
[2026-03-14 05:05:29] 2026-03-14 09:04:23,989 | INFO     | chi2: 0.019483818975195855
[2026-03-14 05:05:29] 2026-03-14 09:04:23,989 | INFO     | current memory leak: 2.40 B/s (using 258 data points, chi2=0.02)
[2026-03-14 05:05:29] 2026-03-14 09:04:23,989 | INFO     | could have reported an average CPU frequency of 2600 MHz (13 samples)
[2026-03-14 05:05:29] 2026-03-14 09:04:23,990 | INFO     | ..............................
[2026-03-14 05:05:29] 2026-03-14 09:04:23,990 | INFO     | . Timing measurements:
[2026-03-14 05:05:29] 2026-03-14 09:04:23,990 | INFO     | . get job = 2 s
[2026-03-14 05:05:29] 2026-03-14 09:04:23,990 | INFO     | . initial setup = 61 s
[2026-03-14 05:05:29] 2026-03-14 09:04:23,990 | INFO     | . payload setup = 73 s
[2026-03-14 05:05:29] 2026-03-14 09:04:23,990 | INFO     | . stage-in = 1 s
[2026-03-14 05:05:29] 2026-03-14 09:04:23,990 | INFO     | . payload execution = 17940 s
[2026-03-14 05:05:29] 2026-03-14 09:04:23,991 | INFO     | . stage-out = 3 s
[2026-03-14 05:05:29] 2026-03-14 09:04:23,991 | INFO     | . log creation = 0 s
[2026-03-14 05:05:29] 2026-03-14 09:04:23,991 | INFO     | ..............................
[2026-03-14 05:05:29] 2026-03-14 09:04:24,157 | INFO     | time since job start (18032s) is within the limit (349056.0s)
[2026-03-14 05:05:29] 2026-03-14 09:04:24,175 | WARNING  | process 693615 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 05:05:29] 2026-03-14 09:04:24,175 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7045945878/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 05:05:29] 2026-03-14 09:04:24,243 | INFO     | 
[2026-03-14 05:05:29] 2026-03-14 09:04:24,244 | INFO     | job summary report
[2026-03-14 05:05:29] 2026-03-14 09:04:24,244 | INFO     | --------------------------------------------------
[2026-03-14 05:05:29] 2026-03-14 09:04:24,244 | INFO     | PanDA job id: 7045945878
[2026-03-14 05:05:29] 2026-03-14 09:04:24,244 | INFO     | task id: 48998012
[2026-03-14 05:05:29] 2026-03-14 09:04:24,244 | INFO     | errors: (none)
[2026-03-14 05:05:29] 2026-03-14 09:04:24,244 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 05:05:29] 2026-03-14 09:04:24,244 | INFO     | pilot state: finished 
[2026-03-14 05:05:29] 2026-03-14 09:04:24,244 | INFO     | transexitcode: 0
[2026-03-14 05:05:29] 2026-03-14 09:04:24,244 | INFO     | exeerrorcode: 0
[2026-03-14 05:05:29] 2026-03-14 09:04:24,245 | INFO     | exeerrordiag: 
[2026-03-14 05:05:29] 2026-03-14 09:04:24,245 | INFO     | exitcode: 0
[2026-03-14 05:05:29] 2026-03-14 09:04:24,245 | INFO     | exitmsg: OK
[2026-03-14 05:05:29] 2026-03-14 09:04:24,245 | INFO     | cpuconsumptiontime: 68952 s
[2026-03-14 05:05:29] 2026-03-14 09:04:24,245 | INFO     | nevents: 400
[2026-03-14 05:05:29] 2026-03-14 09:04:24,245 | INFO     | neventsw: 0
[2026-03-14 05:05:29] 2026-03-14 09:04:24,245 | INFO     | pid: 693615
[2026-03-14 05:05:29] 2026-03-14 09:04:24,245 | INFO     | pgrp: 693615
[2026-03-14 05:05:29] 2026-03-14 09:04:24,246 | INFO     | corecount: 12
[2026-03-14 05:05:29] 2026-03-14 09:04:24,246 | INFO     | event service: False
[2026-03-14 05:05:29] 2026-03-14 09:04:24,246 | INFO     | sizes: {0: 2279173, 2: 2279774, 3: 2279858, 4: 2279886, 5: 2279914, 6: 2279914, 8: 2280559, 18017: 2312666, 18021: 2321720, 18024: 2321858}
[2026-03-14 05:05:29] 2026-03-14 09:04:24,246 | INFO     | --------------------------------------------------
[2026-03-14 05:05:29] 2026-03-14 09:04:24,246 | INFO     | 
[2026-03-14 05:05:29] 2026-03-14 09:04:24,246 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-14 05:05:29] 2026-03-14 09:04:24,273 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 05:05:29] 2026-03-14 09:04:24,273 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 05:05:29] 2026-03-14 09:04:24,273 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 05:05:29] 2026-03-14 09:04:24,273 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 05:05:29] 2026-03-14 09:04:24,274 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 05:05:29] 2026-03-14 09:04:24,274 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 05:05:29] 2026-03-14 09:04:24,274 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 05:05:29] 2026-03-14 09:04:24,274 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 05:05:29] 2026-03-14 09:04:24,274 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 05:05:29] 2026-03-14 09:04:24,274 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 05:05:29] 2026-03-14 09:04:24,274 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 05:05:29] 2026-03-14 09:04:24,274 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 05:05:29] 2026-03-14 09:04:24,274 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 05:05:29] 2026-03-14 09:04:24,275 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 05:05:29] 2026-03-14 09:04:24,275 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 05:05:29] 2026-03-14 09:04:24,275 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 05:05:29] 2026-03-14 09:04:24,275 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 05:05:29] 2026-03-14 09:04:24,275 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 05:05:29] 2026-03-14 09:04:24,275 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 05:05:29] 2026-03-14 09:04:24,275 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 05:05:29] 2026-03-14 09:04:24,275 | INFO     | job 7045945878 has completed (purged errors)
[2026-03-14 05:05:29] 2026-03-14 09:04:24,276 | INFO     | overall cleanup function is called
[2026-03-14 05:05:29] 2026-03-14 09:04:25,352 | INFO     | --- collectZombieJob: --- 10, [693615]
[2026-03-14 05:05:29] 2026-03-14 09:04:25,352 | INFO     | zombie collector waiting for pid 693615
[2026-03-14 05:05:29] 2026-03-14 09:04:25,353 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 05:05:29] 2026-03-14 09:04:25,353 | INFO     | collected zombie processes
[2026-03-14 05:05:29] 2026-03-14 09:04:25,365 | INFO     | will attempt to kill all subprocesses of pid=693615
[2026-03-14 05:05:29] 2026-03-14 09:04:25,409 | INFO     | number of running child processes to parent process 693615: 1
[2026-03-14 05:05:29] 2026-03-14 09:04:25,409 | INFO     | maximum number of monitored processes: 6
[2026-03-14 05:05:29] 2026-03-14 09:04:25,410 | INFO     | aborting job monitoring since job object (job id=7045945878) has expired
[2026-03-14 05:05:29] 2026-03-14 09:04:26,825 | INFO     | PID=682000 has CPU usage=14.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 05:05:29] 2026-03-14 09:04:26,826 | INFO     | .. there are 14 such processes running
[2026-03-14 05:05:29] 2026-03-14 09:04:26,857 | INFO     | process IDs to be killed: [693615] (in reverse order)
[2026-03-14 05:05:29] 2026-03-14 09:04:26,958 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 05:05:29] 2026-03-14 09:04:26,959 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 05:05:29] 2026-03-14 09:04:26,987 | INFO     | did not find any defunct processes belonging to 693615
[2026-03-14 05:05:29] 2026-03-14 09:04:26,998 | INFO     | did not find any defunct processes belonging to 693615
[2026-03-14 05:05:29] 2026-03-14 09:04:26,998 | INFO     | ready for new job
[2026-03-14 05:05:29] 2026-03-14 09:04:26,998 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 05:05:29] 2026-03-14 09:04:27,001 | INFO     | **************************************
[2026-03-14 05:05:29] 2026-03-14 09:04:27,002 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-14 05:05:29] 2026-03-14 09:04:27,002 | INFO     | **************************************
[2026-03-14 05:05:29] 2026-03-14 09:04:27,002 | INFO     | 
[2026-03-14 05:05:29] 2026-03-14 09:04:27,004 | INFO     | architecture information:
[2026-03-14 05:05:29] 2026-03-14 09:04:27,004 | INFO     | executing command: cat /etc/os-release
[2026-03-14 05:05:29] 2026-03-14 09:04:27,024 | INFO     | cat /etc/os-release:
[2026-03-14 05:05:29] NAME="CentOS Linux"
[2026-03-14 05:05:29] VERSION="7 (Core)"
[2026-03-14 05:05:29] ID="centos"
[2026-03-14 05:05:29] ID_LIKE="rhel fedora"
[2026-03-14 05:05:29] VERSION_ID="7"
[2026-03-14 05:05:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 05:05:29] ANSI_COLOR="0;31"
[2026-03-14 05:05:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 05:05:29] HOME_URL="https://www.centos.org/"
[2026-03-14 05:05:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 05:05:29] 
[2026-03-14 05:05:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 05:05:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 05:05:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 05:05:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 05:05:29] 
[2026-03-14 05:05:29] 2026-03-14 09:04:27,025 | INFO     | **************************************
[2026-03-14 05:05:29] 2026-03-14 09:04:27,528 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-14 05:05:29] 2026-03-14 09:04:27,676 | INFO     | sufficient remaining disk space (52089061376 B)
[2026-03-14 05:05:29] 2026-03-14 09:04:27,677 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 05:05:29] 2026-03-14 09:04:27,677 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 05:05:29] 2026-03-14 09:04:27,677 | INFO     | update_server=False
[2026-03-14 05:05:29] 2026-03-14 09:04:27,677 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 05:05:29] 2026-03-14 09:04:27,678 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-14 05:05:29] 2026-03-14 09:04:27,678 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 05:05:29] 2026-03-14 09:04:27,678 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 05:05:29] 2026-03-14 09:04:27,678 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 05:05:29] 2026-03-14 09:04:27,678 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 05:05:29] 2026-03-14 09:04:27,750 | INFO     | all payload control threads have been joined
[2026-03-14 05:05:29] 2026-03-14 09:04:27,914 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-14 05:05:29] 2026-03-14 09:04:27,914 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-14 05:05:29] 2026-03-14 09:04:27,915 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 05:05:29] 2026-03-14 09:04:27,915 | INFO     | will abort loop
[2026-03-14 05:05:29] 2026-03-14 09:04:27,928 | INFO     | all data control threads have been joined
[2026-03-14 05:05:29] 2026-03-14 09:04:28,028 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 05:05:29] 2026-03-14 09:04:28,684 | INFO     | [job] retrieve thread has finished
[2026-03-14 05:05:29] 2026-03-14 09:04:28,730 | INFO     | [payload] validate_post thread has finished
[2026-03-14 05:05:29] 2026-03-14 09:04:28,759 | INFO     | [payload] control thread has finished
[2026-03-14 05:05:29] 2026-03-14 09:04:28,922 | INFO     | [job] job monitor thread has finished
[2026-03-14 05:05:29] 2026-03-14 09:04:28,925 | INFO     | all job control threads have been joined
[2026-03-14 05:05:29] 2026-03-14 09:04:28,938 | INFO     | [data] control thread has finished
[2026-03-14 05:05:29] 2026-03-14 09:04:29,127 | INFO     | [job] validate thread has finished
[2026-03-14 05:05:29] 2026-03-14 09:04:29,181 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 05:05:29] 2026-03-14 09:04:29,250 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 05:05:29] 2026-03-14 09:04:29,352 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 05:05:29] 2026-03-14 09:04:29,442 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 05:05:29] 2026-03-14 09:04:29,597 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 05:05:29] 2026-03-14 09:04:29,606 | INFO     | [data] copytool_in thread has finished
[2026-03-14 05:05:29] 2026-03-14 09:04:29,685 | INFO     | [data] copytool_out thread has finished
[2026-03-14 05:05:29] 2026-03-14 09:04:29,910 | INFO     | [payload] failed_post thread has finished
[2026-03-14 05:05:29] 2026-03-14 09:04:29,931 | INFO     | [job] control thread has finished
[2026-03-14 05:05:29] 2026-03-14 09:04:30,358 | INFO     | [job] queue monitor thread has finished
[2026-03-14 05:05:29] 2026-03-14 09:04:32,065 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 05:05:29] 2026-03-14 09:05:23,669 | INFO     | [monitor] cgroup control has ended
[2026-03-14 05:05:29] 2026-03-14 09:05:23,786 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140695672846144)>', '<ExcThread(monitor, started 140695125874432)>']
[2026-03-14 05:05:29] 2026-03-14 09:05:24,103 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 05:05:29] 2026-03-14 09:05:24,103 | INFO     | [monitor] control thread has ended
[2026-03-14 05:05:29] 2026-03-14 09:05:28,812 | INFO     | all workflow threads have been joined
[2026-03-14 05:05:29] 2026-03-14 09:05:28,817 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 05:05:29] 2026-03-14 09:05:28,817 | INFO     | traces error code: 0
[2026-03-14 05:05:29] 2026-03-14 09:05:28,818 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 05:05:29] 2026-03-14 09:05:29,314 [wrapper] ==== pilot stdout END ====
[2026-03-14 05:05:29] 2026-03-14 09:05:29,332 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 05:05:29] 2026-03-14 09:05:29,398 [wrapper] pilotpid: 682000
[2026-03-14 05:05:29] 2026-03-14 09:05:29,400 [wrapper] Pilot exit status: 0
[2026-03-14 05:05:29] 2026-03-14 09:05:29,430 [wrapper] pandaids: 7045945878
[2026-03-14 05:05:29] 2026-03-14 09:05:29,505 [wrapper] cleanup supervisor_pilot 1159713 682001
[2026-03-14 05:05:29] 2026-03-14 09:05:29,510 [wrapper] Test setup, not cleaning
[2026-03-14 05:05:29] 2026-03-14 09:05:29,513 [wrapper] apfmon messages muted
[2026-03-14 05:05:29] 2026-03-14 09:05:29,515 [wrapper] ==== wrapper stdout END ====
[2026-03-14 05:05:29] 2026-03-14 09:05:29,518 [wrapper] ==== wrapper stderr END ====
[2026-03-14 05:05:29]  *** Error codes and diagnostics ***
[2026-03-14 05:05:29]     "exeErrorCode": 0,
[2026-03-14 05:05:29]     "exeErrorDiag": "",
[2026-03-14 05:05:29]     "pilotErrorCode": 0,
[2026-03-14 05:05:29]     "pilotErrorDiag": "",
[2026-03-14 05:05:29]  *** Listing of results directory ***
[2026-03-14 05:05:29] total 595784
[2026-03-14 05:05:29] -rw-r--r--. 1 boincer umatlas    584627 Mar  8 03:59 pilot3.tar.gz
[2026-03-14 05:05:29] -rwx------. 1 boincer umatlas     36322 Mar  8 03:59 runpilot2-wrapper.sh
[2026-03-14 05:05:29] -rw-r--r--. 1 boincer umatlas      5111 Mar  8 03:59 queuedata.json
[2026-03-14 05:05:29] -rw-r--r--. 1 boincer umatlas       100 Mar 14 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 05:05:29] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 14 00:00 run_atlas
[2026-03-14 05:05:29] -rw-r--r--. 1 boincer umatlas       105 Mar 14 00:00 job.xml
[2026-03-14 05:05:29] -rw-r--r--. 2 boincer umatlas 341527272 Mar 14 00:00 EVNT.48998009._000026.pool.root.1
[2026-03-14 05:05:29] -rw-r--r--. 2 boincer umatlas     15845 Mar 14 00:00 start_atlas.sh
[2026-03-14 05:05:29] drwxrwx--x. 2 boincer umatlas      4096 Mar 14 00:00 shared
[2026-03-14 05:05:29] -rw-r--r--. 2 boincer umatlas    597956 Mar 14 00:00 input.tar.gz
[2026-03-14 05:05:29] -rw-r--r--. 1 boincer umatlas         0 Mar 14 00:00 boinc_lockfile
[2026-03-14 05:05:29] -rw-r--r--. 1 boincer umatlas      2585 Mar 14 00:00 pandaJob.out
[2026-03-14 05:05:29] -rw-------. 1 boincer umatlas        57 Mar 14 00:00 setup.sh.local
[2026-03-14 05:05:29] -rw-------. 1 boincer umatlas   1004579 Mar 14 00:02 agis_schedconf.cvmfs.json
[2026-03-14 05:05:29] -rw-------. 1 boincer umatlas       442 Mar 14 00:03 workernode_map.json
[2026-03-14 05:05:29] drwx------. 5 boincer umatlas      4096 Mar 14 00:03 pilot3
[2026-03-14 05:05:29] -rw-r--r--. 1 boincer umatlas      6660 Mar 14 05:00 init_data.xml
[2026-03-14 05:05:29] -rw-------. 1 boincer umatlas 259102918 Mar 14 05:03 HITS.48998012._000388.pool.root.1
[2026-03-14 05:05:29] -rw-r--r--. 1 boincer umatlas       531 Mar 14 05:03 boinc_task_state.xml
[2026-03-14 05:05:29] -rw-------. 1 boincer umatlas        95 Mar 14 05:03 pilot_heartbeat.json
[2026-03-14 05:05:29] -rw-------. 1 boincer umatlas      1041 Mar 14 05:04 memory_monitor_summary.json
[2026-03-14 05:05:29] -rw-------. 1 boincer umatlas   1511579 Mar 14 05:04 agis_ddmendpoints.agis.ALL.json
[2026-03-14 05:05:29] -rw-------. 1 boincer umatlas    561175 Mar 14 05:04 log.48998012._000388.job.log.tgz.1
[2026-03-14 05:05:29] -rw-------. 1 boincer umatlas      6389 Mar 14 05:04 heartbeat.json
[2026-03-14 05:05:29] -rw-r--r--. 1 boincer umatlas      8192 Mar 14 05:05 boinc_mmap_file
[2026-03-14 05:05:29] -rw-r--r--. 1 boincer umatlas        28 Mar 14 05:05 wrapper_checkpoint.txt
[2026-03-14 05:05:29] -rw-------. 1 boincer umatlas      4734 Mar 14 05:05 pilotlog.txt
[2026-03-14 05:05:29] -rw-------. 1 boincer umatlas   2193977 Mar 14 05:05 log.48998012._000388.job.log.1
[2026-03-14 05:05:29] -rw-------. 1 boincer umatlas       357 Mar 14 05:05 output.list
[2026-03-14 05:05:29] -rw-r--r--. 1 boincer umatlas       620 Mar 14 05:05 runtime_log
[2026-03-14 05:05:29] -rw-------. 1 boincer umatlas   2775040 Mar 14 05:05 result.tar.gz
[2026-03-14 05:05:29] -rw-r--r--. 1 boincer umatlas      9344 Mar 14 05:05 runtime_log.err
[2026-03-14 05:05:29] -rw-------. 1 boincer umatlas       657 Mar 14 05:05 e6MKDmKEOJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmqAWLDmrtB9cm.diag
[2026-03-14 05:05:29] -rw-r--r--. 1 boincer umatlas     21292 Mar 14 05:05 stderr.txt
[2026-03-14 05:05:29] HITS file was successfully produced:
[2026-03-14 05:05:29] -rw-------. 1 boincer umatlas 259102918 Mar 14 05:03 shared/HITS.pool.root.1
[2026-03-14 05:05:29]  *** Contents of shared directory: ***
[2026-03-14 05:05:29] total 589872
[2026-03-14 05:05:29] -rw-r--r--. 2 boincer umatlas 341527272 Mar 14 00:00 ATLAS.root_0
[2026-03-14 05:05:29] -rw-r--r--. 2 boincer umatlas     15845 Mar 14 00:00 start_atlas.sh
[2026-03-14 05:05:29] -rw-r--r--. 2 boincer umatlas    597956 Mar 14 00:00 input.tar.gz
[2026-03-14 05:05:29] -rw-------. 1 boincer umatlas 259102918 Mar 14 05:03 HITS.pool.root.1
[2026-03-14 05:05:29] -rw-------. 1 boincer umatlas   2775040 Mar 14 05:05 result.tar.gz
05:05:30 (674547): run_atlas exited; CPU time 69434.271850
05:05:30 (674547): called boinc_finish(0)

</stderr_txt>
]]>

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