Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:36:40 (1924781): wrapper (7.7.26015): starting
07:36:40 (1924781): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 07:36:40] Arguments: --nthreads 4
[2026-03-15 07:36:40] Threads: 4
[2026-03-15 07:36:40] Checking for CVMFS
[2026-03-15 07:36:40] No cvmfs_config command found, will try listing directly
[2026-03-15 07:36:40] CVMFS is ok
[2026-03-15 07:36:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 07:36:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 07:36:40] Further information can be found at the LHC@home message board.
[2026-03-15 07:36:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 07:36:40] Checking for apptainer binary...
[2026-03-15 07:36:40] which: no apptainer in ((null))
[2026-03-15 07:36:40] apptainer is not installed, using version from CVMFS
[2026-03-15 07:36:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 07:36:40] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot108/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-15 07:36:40] apptainer works
[2026-03-15 07:36:40] Set ATHENA_PROC_NUMBER=4
[2026-03-15 07:36:40] Set ATHENA_CORE_NUMBER=4
[2026-03-15 07:36:40] Starting ATLAS job with PandaID=7044629717
[2026-03-15 07:36:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot108/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 08:56:05]  *** The last 200 lines of the pilot log: ***
[2026-03-15 08:56:05]  filesize=266085
[2026-03-15 08:56:05]  filetype=log
[2026-03-15 08:56:05]  guid=94b1164d-2b8d-4179-b941-1b910e7cc7e1
[2026-03-15 08:56:05]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-15 08:56:05]  is_altstaged=None
[2026-03-15 08:56:05]  is_tar=False
[2026-03-15 08:56:05]  lfn=log.48955010._032074.job.log.tgz.1
[2026-03-15 08:56:05]  mtime=0
[2026-03-15 08:56:05]  protocol_id=None
[2026-03-15 08:56:05]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-15 08:56:05]  replicas=None
[2026-03-15 08:56:05]  scope=mc23_13p6TeV
[2026-03-15 08:56:05]  status=None
[2026-03-15 08:56:05]  status_code=0
[2026-03-15 08:56:05]  storage_token=
[2026-03-15 08:56:05]  surl=/var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7044629717/log.48955010._032074.job.log.tgz.1
[2026-03-15 08:56:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/03/72/log.48955010._032074.job.log.tgz.1
[2026-03-15 08:56:05]  workdir=None
[2026-03-15 08:56:05] ]
[2026-03-15 08:56:05] 2026-03-15 07:54:58,464 | INFO     | transferring file log.48955010._032074.job.log.tgz.1 from /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7044629717/log.48955010._032074.job.log.tgz.1 to /var/lib/
[2026-03-15 08:56:05] 2026-03-15 07:54:58,464 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7044629717/log.48955010._032074.job.log.tgz.1 /var/lib/boinc/var/slot108/slots/1/
[2026-03-15 08:56:05] 2026-03-15 07:54:58,478 | INFO     | adding to output.list: log.48955010._032074.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/03/72/log.48955010._032074.job.log.tg
[2026-03-15 08:56:05] 2026-03-15 07:54:58,479 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-15 08:56:05] 2026-03-15 07:54:58,479 | INFO     | summary of transferred files:
[2026-03-15 08:56:05] 2026-03-15 07:54:58,479 | INFO     |  -- lfn=log.48955010._032074.job.log.tgz.1, status_code=0, status=transferred
[2026-03-15 08:56:05] 2026-03-15 07:54:58,479 | INFO     | stage-out finished correctly
[2026-03-15 08:56:05] 2026-03-15 07:54:59,528 | INFO     | monitor loop #340: job 0:7044629717 is in state 'finished'
[2026-03-15 08:56:05] 2026-03-15 07:54:59,529 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-15 08:56:05] 2026-03-15 07:54:59,696 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-15 08:56:05] 2026-03-15 07:54:59,743 | INFO     | job 7044629717 has state=finished
[2026-03-15 08:56:05] 2026-03-15 07:54:59,743 | INFO     | preparing for final server update for job 7044629717 in state='finished'
[2026-03-15 08:56:05] 2026-03-15 07:54:59,743 | INFO     | reading metadata from: /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7044629717/jobReport.json
[2026-03-15 08:56:05] 2026-03-15 07:54:59,745 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot108/slots/1/workernode_map.json
[2026-03-15 08:56:05] 2026-03-15 07:54:59,745 | INFO     | this job has now completed (state=finished)
[2026-03-15 08:56:05] 2026-03-15 07:54:59,745 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 08:56:05] 2026-03-15 07:54:59,745 | INFO     | log transfer has been attempted: DONE
[2026-03-15 08:56:05] 2026-03-15 07:54:59,745 | INFO     | job 7044629717 has finished - writing final server update
[2026-03-15 08:56:05] 2026-03-15 07:54:59,745 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3913135/.job.ad'
[2026-03-15 08:56:05] 2026-03-15 07:54:59,745 | INFO     | total number of processed events: 400 (read)
[2026-03-15 08:56:05] 2026-03-15 07:54:59,763 | INFO     | using path: /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7044629717/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 08:56:05] 2026-03-15 07:54:59,763 | INFO     | extracted standard info from prmon json
[2026-03-15 08:56:05] 2026-03-15 07:54:59,763 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 08:56:05] 2026-03-15 07:54:59,764 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 08:56:05] 2026-03-15 07:54:59,764 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 08:56:05] 2026-03-15 07:54:59,764 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 08:56:05] 2026-03-15 07:54:59,765 | INFO     | fitting pss+swap vs Time
[2026-03-15 08:56:05] 2026-03-15 07:54:59,765 | INFO     | sum of square deviations: 106336877.5
[2026-03-15 08:56:05] 2026-03-15 07:54:59,765 | INFO     | sum of deviations: 418254857.0
[2026-03-15 08:56:05] 2026-03-15 07:54:59,765 | INFO     | mean x: 1773559041.5
[2026-03-15 08:56:05] 2026-03-15 07:54:59,765 | INFO     | mean y: 2330717.5428571426
[2026-03-15 08:56:05] 2026-03-15 07:54:59,765 | INFO     | intersect: -6973609339.410946
[2026-03-15 08:56:05] 2026-03-15 07:54:59,765 | INFO     | chi2: 0.0004927314505468639
[2026-03-15 08:56:05] 2026-03-15 07:54:59,765 | INFO     | current memory leak: 3.93 B/s (using 70 data points, chi2=0.00)
[2026-03-15 08:56:05] 2026-03-15 07:54:59,766 | INFO     | could have reported an average CPU frequency of 3599 MHz (6 samples)
[2026-03-15 08:56:05] 2026-03-15 07:54:59,766 | INFO     | ..............................
[2026-03-15 08:56:05] 2026-03-15 07:54:59,766 | INFO     | . Timing measurements:
[2026-03-15 08:56:05] 2026-03-15 07:54:59,766 | INFO     | . get job = 0 s
[2026-03-15 08:56:05] 2026-03-15 07:54:59,766 | INFO     | . initial setup = 4 s
[2026-03-15 08:56:05] 2026-03-15 07:54:59,766 | INFO     | . payload setup = 4 s
[2026-03-15 08:56:05] 2026-03-15 07:54:59,766 | INFO     | . stage-in = 0 s
[2026-03-15 08:56:05] 2026-03-15 07:54:59,766 | INFO     | . payload execution = 4666 s
[2026-03-15 08:56:05] 2026-03-15 07:54:59,766 | INFO     | . stage-out = 0 s
[2026-03-15 08:56:05] 2026-03-15 07:54:59,766 | INFO     | . log creation = 0 s
[2026-03-15 08:56:05] 2026-03-15 07:54:59,766 | INFO     | ..............................
[2026-03-15 08:56:05] 2026-03-15 07:54:59,814 | INFO     | 
[2026-03-15 08:56:05] 2026-03-15 07:54:59,814 | INFO     | job summary report
[2026-03-15 08:56:05] 2026-03-15 07:54:59,814 | INFO     | --------------------------------------------------
[2026-03-15 08:56:05] 2026-03-15 07:54:59,814 | INFO     | PanDA job id: 7044629717
[2026-03-15 08:56:05] 2026-03-15 07:54:59,814 | INFO     | task id: 48955010
[2026-03-15 08:56:05] 2026-03-15 07:54:59,814 | INFO     | errors: (none)
[2026-03-15 08:56:05] 2026-03-15 07:54:59,814 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 08:56:05] 2026-03-15 07:54:59,814 | INFO     | pilot state: finished 
[2026-03-15 08:56:05] 2026-03-15 07:54:59,814 | INFO     | transexitcode: 0
[2026-03-15 08:56:05] 2026-03-15 07:54:59,814 | INFO     | exeerrorcode: 0
[2026-03-15 08:56:05] 2026-03-15 07:54:59,814 | INFO     | exeerrordiag: 
[2026-03-15 08:56:05] 2026-03-15 07:54:59,814 | INFO     | exitcode: 0
[2026-03-15 08:56:05] 2026-03-15 07:54:59,814 | INFO     | exitmsg: OK
[2026-03-15 08:56:05] 2026-03-15 07:54:59,814 | INFO     | cpuconsumptiontime: 17861 s
[2026-03-15 08:56:05] 2026-03-15 07:54:59,814 | INFO     | nevents: 400
[2026-03-15 08:56:05] 2026-03-15 07:54:59,814 | INFO     | neventsw: 0
[2026-03-15 08:56:05] 2026-03-15 07:54:59,814 | INFO     | pid: 1935210
[2026-03-15 08:56:05] 2026-03-15 07:54:59,814 | INFO     | pgrp: 1935210
[2026-03-15 08:56:05] 2026-03-15 07:54:59,814 | INFO     | corecount: 4
[2026-03-15 08:56:05] 2026-03-15 07:54:59,815 | INFO     | event service: False
[2026-03-15 08:56:05] 2026-03-15 07:54:59,815 | INFO     | sizes: {0: 2280191, 11: 2280191, 4674: 2306421, 4675: 2315443, 4676: 2315499, 4677: 2315693}
[2026-03-15 08:56:05] 2026-03-15 07:54:59,815 | INFO     | --------------------------------------------------
[2026-03-15 08:56:05] 2026-03-15 07:54:59,815 | INFO     | 
[2026-03-15 08:56:05] 2026-03-15 07:54:59,815 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot108/slots/1
[2026-03-15 08:56:05] 2026-03-15 07:54:59,829 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 08:56:05] 2026-03-15 07:54:59,829 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 08:56:05] 2026-03-15 07:54:59,829 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 08:56:05] 2026-03-15 07:54:59,829 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 08:56:05] 2026-03-15 07:54:59,829 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 08:56:05] 2026-03-15 07:54:59,829 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 08:56:05] 2026-03-15 07:54:59,829 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 08:56:05] 2026-03-15 07:54:59,829 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 08:56:05] 2026-03-15 07:54:59,829 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 08:56:05] 2026-03-15 07:54:59,829 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 08:56:05] 2026-03-15 07:54:59,829 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 08:56:05] 2026-03-15 07:54:59,830 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 08:56:05] 2026-03-15 07:54:59,830 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 08:56:05] 2026-03-15 07:54:59,830 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 08:56:05] 2026-03-15 07:54:59,830 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 08:56:05] 2026-03-15 07:54:59,830 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 08:56:05] 2026-03-15 07:54:59,830 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 08:56:05] 2026-03-15 07:54:59,830 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 08:56:05] 2026-03-15 07:54:59,830 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 08:56:05] 2026-03-15 07:54:59,830 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 08:56:05] 2026-03-15 07:54:59,830 | INFO     | job 7044629717 has completed (purged errors)
[2026-03-15 08:56:05] 2026-03-15 07:54:59,830 | INFO     | overall cleanup function is called
[2026-03-15 08:56:05] 2026-03-15 07:55:00,836 | INFO     | --- collectZombieJob: --- 10, [1935210]
[2026-03-15 08:56:05] 2026-03-15 07:55:00,837 | INFO     | zombie collector waiting for pid 1935210
[2026-03-15 08:56:05] 2026-03-15 07:55:00,837 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 08:56:05] 2026-03-15 07:55:00,837 | INFO     | collected zombie processes
[2026-03-15 08:56:05] 2026-03-15 07:55:00,837 | INFO     | will attempt to kill all subprocesses of pid=1935210
[2026-03-15 08:56:05] 2026-03-15 07:55:01,290 | INFO     | process IDs to be killed: [1935210] (in reverse order)
[2026-03-15 08:56:05] 2026-03-15 07:55:01,524 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 08:56:05] 2026-03-15 07:55:01,525 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 08:56:05] 2026-03-15 07:55:01,555 | INFO     | did not find any defunct processes belonging to 1935210
[2026-03-15 08:56:05] 2026-03-15 07:55:01,585 | INFO     | did not find any defunct processes belonging to 1935210
[2026-03-15 08:56:05] 2026-03-15 07:55:01,585 | INFO     | ready for new job
[2026-03-15 08:56:05] 2026-03-15 07:55:01,585 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 08:56:05] 2026-03-15 07:55:01,586 | INFO     | **************************************
[2026-03-15 08:56:05] 2026-03-15 07:55:01,586 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 08:56:05] 2026-03-15 07:55:01,586 | INFO     | **************************************
[2026-03-15 08:56:05] 2026-03-15 07:55:01,586 | INFO     | 
[2026-03-15 08:56:05] 2026-03-15 07:55:01,592 | INFO     | architecture information:
[2026-03-15 08:56:05] 2026-03-15 07:55:01,592 | INFO     | executing command: cat /etc/os-release
[2026-03-15 08:56:05] 2026-03-15 07:55:01,606 | INFO     | cat /etc/os-release:
[2026-03-15 08:56:05] NAME="CentOS Linux"
[2026-03-15 08:56:05] VERSION="7 (Core)"
[2026-03-15 08:56:05] ID="centos"
[2026-03-15 08:56:05] ID_LIKE="rhel fedora"
[2026-03-15 08:56:05] VERSION_ID="7"
[2026-03-15 08:56:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 08:56:05] ANSI_COLOR="0;31"
[2026-03-15 08:56:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 08:56:05] HOME_URL="https://www.centos.org/"
[2026-03-15 08:56:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 08:56:05] 
[2026-03-15 08:56:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 08:56:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 08:56:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 08:56:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 08:56:05] 
[2026-03-15 08:56:05] 2026-03-15 07:55:01,606 | INFO     | **************************************
[2026-03-15 08:56:05] 2026-03-15 07:55:02,109 | INFO     | executing command: df -mP /var/lib/boinc/var/slot108/slots/1
[2026-03-15 08:56:05] 2026-03-15 07:55:02,126 | INFO     | sufficient remaining disk space (77136396288 B)
[2026-03-15 08:56:05] 2026-03-15 07:55:02,126 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 08:56:05] 2026-03-15 07:55:02,126 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 08:56:05] 2026-03-15 07:55:02,126 | INFO     | update_server=False
[2026-03-15 08:56:05] 2026-03-15 07:55:02,126 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 08:56:05] 2026-03-15 07:55:02,127 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 08:56:05] 2026-03-15 07:55:02,127 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 08:56:05] 2026-03-15 07:55:02,267 | INFO     | all payload control threads have been joined
[2026-03-15 08:56:05] 2026-03-15 07:55:02,598 | INFO     | all data control threads have been joined
[2026-03-15 08:56:05] 2026-03-15 07:55:02,986 | INFO     | all job control threads have been joined
[2026-03-15 08:56:05] 2026-03-15 07:55:03,039 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 08:56:05] 2026-03-15 07:55:03,040 | INFO     | aborting loop
[2026-03-15 08:56:05] 2026-03-15 07:55:03,132 | INFO     | [job] retrieve thread has finished
[2026-03-15 08:56:05] 2026-03-15 07:55:03,272 | INFO     | [payload] control thread has finished
[2026-03-15 08:56:05] 2026-03-15 07:55:03,354 | INFO     | [payload] failed_post thread has finished
[2026-03-15 08:56:05] 2026-03-15 07:55:03,478 | INFO     | [job] validate thread has finished
[2026-03-15 08:56:05] 2026-03-15 07:55:03,570 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 08:56:05] 2026-03-15 07:55:03,603 | INFO     | [data] control thread has finished
[2026-03-15 08:56:05] 2026-03-15 07:55:03,763 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 08:56:05] 2026-03-15 07:55:03,985 | INFO     | [data] copytool_in thread has finished
[2026-03-15 08:56:05] 2026-03-15 07:55:03,992 | INFO     | [job] control thread has finished
[2026-03-15 08:56:05] 2026-03-15 07:55:04,044 | INFO     | [job] job monitor thread has finished
[2026-03-15 08:56:05] 2026-03-15 07:55:04,131 | INFO     | [data] copytool_out thread has finished
[2026-03-15 08:56:05] 2026-03-15 07:55:04,229 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 08:56:05] 2026-03-15 07:55:04,675 | INFO     | [payload] validate_post thread has finished
[2026-03-15 08:56:05] 2026-03-15 07:55:04,824 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 08:56:05] 2026-03-15 07:55:05,829 | INFO     | [job] queue monitor thread has finished
[2026-03-15 08:56:05] 2026-03-15 07:55:06,132 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 08:56:05] 2026-03-15 07:55:13,161 | INFO     | job.realtimelogging is not enabled
[2026-03-15 08:56:05] 2026-03-15 07:55:14,166 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 08:56:05] 2026-03-15 07:55:31,821 | INFO     | PID=1929317 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 08:56:05] 2026-03-15 07:55:31,821 | INFO     | .. there are 45 such processes running
[2026-03-15 08:56:05] 2026-03-15 07:55:31,822 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 08:56:05] 2026-03-15 07:55:31,822 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 08:56:05] 2026-03-15 07:55:31,822 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 08:56:05] 2026-03-15 07:55:59,559 | INFO     | [monitor] cgroup control has ended
[2026-03-15 08:56:05] 2026-03-15 07:56:00,332 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22856207304512)>', '<ExcThread(monitor, started 22855963379456)>']
[2026-03-15 08:56:05] 2026-03-15 07:56:00,957 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 08:56:05] 2026-03-15 07:56:00,958 | INFO     | [monitor] control thread has ended
[2026-03-15 08:56:05] 2026-03-15 07:56:05,360 | INFO     | all workflow threads have been joined
[2026-03-15 08:56:05] 2026-03-15 07:56:05,361 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 08:56:05] 2026-03-15 07:56:05,361 | INFO     | traces error code: 0
[2026-03-15 08:56:05] 2026-03-15 07:56:05,361 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 08:56:05] 2026-03-15 07:56:05,489 [wrapper] ==== pilot stdout END ====
[2026-03-15 08:56:05] 2026-03-15 07:56:05,491 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 08:56:05] 2026-03-15 07:56:05,493 [wrapper] pilotpid: 1929317
[2026-03-15 08:56:05] 2026-03-15 07:56:05,495 [wrapper] Pilot exit status: 0
[2026-03-15 08:56:05] 2026-03-15 07:56:05,502 [wrapper] pandaids: 7044629717
[2026-03-15 08:56:05] 2026-03-15 07:56:05,636 [wrapper] cleanup supervisor_pilot 2666860 1929318
[2026-03-15 08:56:05] 2026-03-15 07:56:05,638 [wrapper] Test setup, not cleaning
[2026-03-15 08:56:05] 2026-03-15 07:56:05,641 [wrapper] apfmon messages muted
[2026-03-15 08:56:05] 2026-03-15 07:56:05,643 [wrapper] ==== wrapper stdout END ====
[2026-03-15 08:56:05] 2026-03-15 07:56:05,646 [wrapper] ==== wrapper stderr END ====
[2026-03-15 08:56:05]  *** Error codes and diagnostics ***
[2026-03-15 08:56:05]     "exeErrorCode": 0,
[2026-03-15 08:56:05]     "exeErrorDiag": "",
[2026-03-15 08:56:05]     "pilotErrorCode": 0,
[2026-03-15 08:56:05]     "pilotErrorDiag": "",
[2026-03-15 08:56:05]  *** Listing of results directory ***
[2026-03-15 08:56:05] total 617684
[2026-03-15 08:56:05] -rw-r--r--. 1 boinc boinc      5111 Mar 13 18:07 queuedata.json
[2026-03-15 08:56:05] -rw-r--r--. 1 boinc boinc    585013 Mar 13 18:07 pilot3.tar.gz
[2026-03-15 08:56:05] -rwx------. 1 boinc boinc     36322 Mar 13 18:07 runpilot2-wrapper.sh
[2026-03-15 08:56:05] -rw-r--r--. 1 boinc boinc       100 Mar 15 07:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 08:56:05] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 07:36 run_atlas
[2026-03-15 08:56:05] -rw-r--r--. 1 boinc boinc       105 Mar 15 07:36 job.xml
[2026-03-15 08:56:05] -rw-r--r--. 1 boinc boinc      6709 Mar 15 07:36 init_data.xml
[2026-03-15 08:56:05] -rw-r--r--. 2 boinc boinc 437334415 Mar 15 07:36 EVNT.46701403._001636.pool.root.1
[2026-03-15 08:56:05] -rw-r--r--. 2 boinc boinc     15845 Mar 15 07:36 start_atlas.sh
[2026-03-15 08:56:05] drwxrwx--x. 2 boinc boinc      4096 Mar 15 07:36 shared
[2026-03-15 08:56:05] -rw-r--r--. 2 boinc boinc    597531 Mar 15 07:36 input.tar.gz
[2026-03-15 08:56:05] -rw-r--r--. 1 boinc boinc         0 Mar 15 07:36 boinc_lockfile
[2026-03-15 08:56:05] -rw-r--r--. 1 boinc boinc      2563 Mar 15 07:36 pandaJob.out
[2026-03-15 08:56:05] -rw-------. 1 boinc boinc   1006481 Mar 15 07:36 agis_schedconf.cvmfs.json
[2026-03-15 08:56:05] -rw-------. 1 boinc boinc   1511579 Mar 15 07:36 agis_ddmendpoints.agis.ALL.json
[2026-03-15 08:56:05] -rw-------. 1 boinc boinc       444 Mar 15 07:36 workernode_map.json
[2026-03-15 08:56:05] drwx------. 5 boinc boinc      4096 Mar 15 07:36 pilot3
[2026-03-15 08:56:05] -rw-------. 1 boinc boinc 189321842 Mar 15 08:54 HITS.48955010._032074.pool.root.1
[2026-03-15 08:56:05] -rw-r--r--. 1 boinc boinc       530 Mar 15 08:54 boinc_task_state.xml
[2026-03-15 08:56:05] -rw-------. 1 boinc boinc      1028 Mar 15 08:54 memory_monitor_summary.json
[2026-03-15 08:56:05] -rw-------. 1 boinc boinc    266085 Mar 15 08:54 log.48955010._032074.job.log.tgz.1
[2026-03-15 08:56:05] -rw-------. 1 boinc boinc      6350 Mar 15 08:54 heartbeat.json
[2026-03-15 08:56:05] -rw-------. 1 boinc boinc        95 Mar 15 08:55 pilot_heartbeat.json
[2026-03-15 08:56:05] -rw-r--r--. 1 boinc boinc        27 Mar 15 08:55 wrapper_checkpoint.txt
[2026-03-15 08:56:05] -rw-r--r--. 1 boinc boinc      8192 Mar 15 08:56 boinc_mmap_file
[2026-03-15 08:56:05] -rw-------. 1 boinc boinc      4902 Mar 15 08:56 pilotlog.txt
[2026-03-15 08:56:05] -rw-------. 1 boinc boinc    689304 Mar 15 08:56 log.48955010._032074.job.log.1
[2026-03-15 08:56:05] -rw-------. 1 boinc boinc       357 Mar 15 08:56 output.list
[2026-03-15 08:56:05] -rw-r--r--. 1 boinc boinc       620 Mar 15 08:56 runtime_log
[2026-03-15 08:56:05] -rw-------. 1 boinc boinc    972800 Mar 15 08:56 result.tar.gz
[2026-03-15 08:56:05] -rw-r--r--. 1 boinc boinc      9221 Mar 15 08:56 runtime_log.err
[2026-03-15 08:56:05] -rw-------. 1 boinc boinc       662 Mar 15 08:56 07OODmOALL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmfanLDmgSoTKo.diag
[2026-03-15 08:56:05] -rw-r--r--. 1 boinc boinc     21068 Mar 15 08:56 stderr.txt
[2026-03-15 08:56:05] HITS file was successfully produced:
[2026-03-15 08:56:05] -rw-------. 1 boinc boinc 189321842 Mar 15 08:54 shared/HITS.pool.root.1
[2026-03-15 08:56:05]  *** Contents of shared directory: ***
[2026-03-15 08:56:05] total 613536
[2026-03-15 08:56:05] -rw-r--r--. 2 boinc boinc 437334415 Mar 15 07:36 ATLAS.root_0
[2026-03-15 08:56:05] -rw-r--r--. 2 boinc boinc     15845 Mar 15 07:36 start_atlas.sh
[2026-03-15 08:56:05] -rw-r--r--. 2 boinc boinc    597531 Mar 15 07:36 input.tar.gz
[2026-03-15 08:56:05] -rw-------. 1 boinc boinc 189321842 Mar 15 08:54 HITS.pool.root.1
[2026-03-15 08:56:05] -rw-------. 1 boinc boinc    972800 Mar 15 08:56 result.tar.gz
08:56:06 (1924781): run_atlas exited; CPU time 18063.892709
08:56:06 (1924781): called boinc_finish(0)

</stderr_txt>
]]>

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