Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:29:29 (3407506): wrapper (7.7.26015): starting
15:29:29 (3407506): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 15:29:29] Arguments: --nthreads 4
[2026-03-15 15:29:29] Threads: 4
[2026-03-15 15:29:29] Checking for CVMFS
[2026-03-15 15:29:29] No cvmfs_config command found, will try listing directly
[2026-03-15 15:29:29] CVMFS is ok
[2026-03-15 15:29:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 15:29:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 15:29:29] Further information can be found at the LHC@home message board.
[2026-03-15 15:29:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 15:29:29] Checking for apptainer binary...
[2026-03-15 15:29:29] which: no apptainer in ((null))
[2026-03-15 15:29:29] apptainer is not installed, using version from CVMFS
[2026-03-15 15:29:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 15:29:29] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2026-03-15 15:29:29] apptainer works
[2026-03-15 15:29:29] Set ATHENA_PROC_NUMBER=4
[2026-03-15 15:29:29] Set ATHENA_CORE_NUMBER=4
[2026-03-15 15:29:29] Starting ATLAS job with PandaID=7045204268
[2026-03-15 15:29:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 18:34:14]  *** The last 200 lines of the pilot log: ***
[2026-03-15 18:34:14] 2026-03-15 17:33:18,561 | INFO     | reading metadata from: /var/lib/boinc/var/slot28/slots/0/PanDA_Pilot-7045204268/jobReport.json
[2026-03-15 18:34:14] 2026-03-15 17:33:18,564 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot28/slots/0/workernode_map.json
[2026-03-15 18:34:14] 2026-03-15 17:33:18,564 | INFO     | this job has now completed (state=finished)
[2026-03-15 18:34:14] 2026-03-15 17:33:18,564 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 18:34:14] 2026-03-15 17:33:18,565 | INFO     | log transfer has been attempted: DONE
[2026-03-15 18:34:14] 2026-03-15 17:33:18,565 | INFO     | job 7045204268 has finished - writing final server update
[2026-03-15 18:34:14] 2026-03-15 17:33:18,565 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_808359/.job.ad'
[2026-03-15 18:34:14] 2026-03-15 17:33:18,565 | INFO     | total number of processed events: 400 (read)
[2026-03-15 18:34:14] 2026-03-15 17:33:18,577 | INFO     | using path: /var/lib/boinc/var/slot28/slots/0/PanDA_Pilot-7045204268/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 18:34:14] 2026-03-15 17:33:18,577 | INFO     | extracted standard info from prmon json
[2026-03-15 18:34:14] 2026-03-15 17:33:18,577 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 18:34:14] 2026-03-15 17:33:18,578 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 18:34:14] 2026-03-15 17:33:18,578 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 18:34:14] 2026-03-15 17:33:18,578 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 18:34:14] 2026-03-15 17:33:18,581 | INFO     | fitting pss+swap vs Time
[2026-03-15 18:34:14] 2026-03-15 17:33:18,582 | INFO     | sum of square deviations: 1808350185.0
[2026-03-15 18:34:14] 2026-03-15 17:33:18,583 | INFO     | sum of deviations: -28053427036.499996
[2026-03-15 18:34:14] 2026-03-15 17:33:18,583 | INFO     | mean x: 1773590476.5
[2026-03-15 18:34:14] 2026-03-15 17:33:18,583 | INFO     | mean y: 2377048.927777778
[2026-03-15 18:34:14] 2026-03-15 17:33:18,583 | INFO     | intersect: 27516567296.943268
[2026-03-15 18:34:14] 2026-03-15 17:33:18,583 | INFO     | chi2: 1.6443447745983037
[2026-03-15 18:34:14] 2026-03-15 17:33:18,584 | INFO     | sum of square deviations: 1661798600.0
[2026-03-15 18:34:14] 2026-03-15 17:33:18,585 | INFO     | sum of deviations: -27058294356.0
[2026-03-15 18:34:14] 2026-03-15 17:33:18,585 | INFO     | mean x: 1773590324.0
[2026-03-15 18:34:14] 2026-03-15 17:33:18,585 | INFO     | mean y: 2378084.714285714
[2026-03-15 18:34:14] 2026-03-15 17:33:18,585 | INFO     | intersect: 28880925132.320065
[2026-03-15 18:34:14] 2026-03-15 17:33:18,585 | INFO     | chi2: 1.6389846262833991
[2026-03-15 18:34:14] 2026-03-15 17:33:18,585 | INFO     | current chi2=1.6389846262833991 (change=0.3259747224370291 %)
[2026-03-15 18:34:14] 2026-03-15 17:33:18,586 | INFO     | right removable region: 174
[2026-03-15 18:34:14] 2026-03-15 17:33:18,586 | INFO     | sum of square deviations: 1661798600.0
[2026-03-15 18:34:14] 2026-03-15 17:33:18,587 | INFO     | sum of deviations: -47261020203.00001
[2026-03-15 18:34:14] 2026-03-15 17:33:18,587 | INFO     | mean x: 1773590629.0
[2026-03-15 18:34:14] 2026-03-15 17:33:18,587 | INFO     | mean y: 2396658.205714286
[2026-03-15 18:34:14] 2026-03-15 17:33:18,587 | INFO     | intersect: 50442746378.6956
[2026-03-15 18:34:14] 2026-03-15 17:33:18,588 | INFO     | chi2: 0.37357238845689766
[2026-03-15 18:34:14] 2026-03-15 17:33:18,588 | INFO     | current chi2=0.37357238845689766 (change=77.28138318509525 %)
[2026-03-15 18:34:14] 2026-03-15 17:33:18,588 | INFO     | sum of square deviations: 1523386702.5
[2026-03-15 18:34:14] 2026-03-15 17:33:18,589 | INFO     | sum of deviations: -40055052261.00001
[2026-03-15 18:34:14] 2026-03-15 17:33:18,589 | INFO     | mean x: 1773590781.5
[2026-03-15 18:34:14] 2026-03-15 17:33:18,589 | INFO     | mean y: 2388694.7529411763
[2026-03-15 18:34:14] 2026-03-15 17:33:18,590 | INFO     | intersect: 46636162854.67302
[2026-03-15 18:34:14] 2026-03-15 17:33:18,591 | INFO     | chi2: 0.3585836863638854
[2026-03-15 18:34:14] 2026-03-15 17:33:18,591 | INFO     | current chi2=0.3585836863638854 (change=4.012261761348475 %)
[2026-03-15 18:34:14] 2026-03-15 17:33:18,591 | INFO     | left removable region: 20
[2026-03-15 18:34:14] 2026-03-15 17:33:18,591 | INFO     | sum of square deviations: 1132458442.5
[2026-03-15 18:34:14] 2026-03-15 17:33:18,592 | INFO     | sum of deviations: -21993100887.5
[2026-03-15 18:34:14] 2026-03-15 17:33:18,592 | INFO     | mean x: 1773590903.5
[2026-03-15 18:34:14] 2026-03-15 17:33:18,592 | INFO     | mean y: 2368916.603896104
[2026-03-15 18:34:14] 2026-03-15 17:33:18,592 | INFO     | intersect: 34446691295.195526
[2026-03-15 18:34:14] 2026-03-15 17:33:18,593 | INFO     | chi2: 0.2733042694318991
[2026-03-15 18:34:14] 2026-03-15 17:33:18,593 | INFO     | current memory leak: -19.42 B/s (using 154 data points, chi2=0.27)
[2026-03-15 18:34:14] 2026-03-15 17:33:18,593 | INFO     | could have reported an average CPU frequency of 2467 MHz (10 samples)
[2026-03-15 18:34:14] 2026-03-15 17:33:18,593 | INFO     | ..............................
[2026-03-15 18:34:14] 2026-03-15 17:33:18,593 | INFO     | . Timing measurements:
[2026-03-15 18:34:14] 2026-03-15 17:33:18,594 | INFO     | . get job = 0 s
[2026-03-15 18:34:14] 2026-03-15 17:33:18,594 | INFO     | . initial setup = 6 s
[2026-03-15 18:34:14] 2026-03-15 17:33:18,594 | INFO     | . payload setup = 7 s
[2026-03-15 18:34:14] 2026-03-15 17:33:18,594 | INFO     | . stage-in = 0 s
[2026-03-15 18:34:14] 2026-03-15 17:33:18,594 | INFO     | . payload execution = 10977 s
[2026-03-15 18:34:14] 2026-03-15 17:33:18,594 | INFO     | . stage-out = 1 s
[2026-03-15 18:34:14] 2026-03-15 17:33:18,594 | INFO     | . log creation = 0 s
[2026-03-15 18:34:14] 2026-03-15 17:33:18,594 | INFO     | ..............................
[2026-03-15 18:34:14] 2026-03-15 17:33:18,830 | INFO     | 
[2026-03-15 18:34:14] 2026-03-15 17:33:18,831 | INFO     | job summary report
[2026-03-15 18:34:14] 2026-03-15 17:33:18,831 | INFO     | --------------------------------------------------
[2026-03-15 18:34:14] 2026-03-15 17:33:18,831 | INFO     | PanDA job id: 7045204268
[2026-03-15 18:34:14] 2026-03-15 17:33:18,831 | INFO     | task id: 48955015
[2026-03-15 18:34:14] 2026-03-15 17:33:18,831 | INFO     | errors: (none)
[2026-03-15 18:34:14] 2026-03-15 17:33:18,831 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 18:34:14] 2026-03-15 17:33:18,832 | INFO     | pilot state: finished 
[2026-03-15 18:34:14] 2026-03-15 17:33:18,832 | INFO     | transexitcode: 0
[2026-03-15 18:34:14] 2026-03-15 17:33:18,832 | INFO     | exeerrorcode: 0
[2026-03-15 18:34:14] 2026-03-15 17:33:18,832 | INFO     | exeerrordiag: 
[2026-03-15 18:34:14] 2026-03-15 17:33:18,832 | INFO     | exitcode: 0
[2026-03-15 18:34:14] 2026-03-15 17:33:18,832 | INFO     | exitmsg: OK
[2026-03-15 18:34:14] 2026-03-15 17:33:18,832 | INFO     | cpuconsumptiontime: 41250 s
[2026-03-15 18:34:14] 2026-03-15 17:33:18,832 | INFO     | nevents: 400
[2026-03-15 18:34:14] 2026-03-15 17:33:18,832 | INFO     | neventsw: 0
[2026-03-15 18:34:14] 2026-03-15 17:33:18,832 | INFO     | pid: 3416792
[2026-03-15 18:34:14] 2026-03-15 17:33:18,832 | INFO     | pgrp: 3416792
[2026-03-15 18:34:14] 2026-03-15 17:33:18,833 | INFO     | corecount: 4
[2026-03-15 18:34:14] 2026-03-15 17:33:18,833 | INFO     | event service: False
[2026-03-15 18:34:14] 2026-03-15 17:33:18,833 | INFO     | sizes: {0: 2280247, 11: 2280247, 10988: 2309505, 10991: 2318525, 10994: 2318581, 10997: 2318775}
[2026-03-15 18:34:14] 2026-03-15 17:33:18,833 | INFO     | --------------------------------------------------
[2026-03-15 18:34:14] 2026-03-15 17:33:18,833 | INFO     | 
[2026-03-15 18:34:14] 2026-03-15 17:33:18,833 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot28/slots/0
[2026-03-15 18:34:14] 2026-03-15 17:33:18,858 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 18:34:14] 2026-03-15 17:33:18,859 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 18:34:14] 2026-03-15 17:33:18,859 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 18:34:14] 2026-03-15 17:33:18,859 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 18:34:14] 2026-03-15 17:33:18,859 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 18:34:14] 2026-03-15 17:33:18,859 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 18:34:14] 2026-03-15 17:33:18,859 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 18:34:14] 2026-03-15 17:33:18,859 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 18:34:14] 2026-03-15 17:33:18,859 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 18:34:14] 2026-03-15 17:33:18,859 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 18:34:14] 2026-03-15 17:33:18,860 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 18:34:14] 2026-03-15 17:33:18,860 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 18:34:14] 2026-03-15 17:33:18,860 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 18:34:14] 2026-03-15 17:33:18,860 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 18:34:14] 2026-03-15 17:33:18,860 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 18:34:14] 2026-03-15 17:33:18,860 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 18:34:14] 2026-03-15 17:33:18,860 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 18:34:14] 2026-03-15 17:33:18,860 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 18:34:14] 2026-03-15 17:33:18,860 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 18:34:14] 2026-03-15 17:33:18,860 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 18:34:14] 2026-03-15 17:33:18,861 | INFO     | job 7045204268 has completed (purged errors)
[2026-03-15 18:34:14] 2026-03-15 17:33:18,861 | INFO     | overall cleanup function is called
[2026-03-15 18:34:14] 2026-03-15 17:33:19,868 | INFO     | --- collectZombieJob: --- 10, [3416792]
[2026-03-15 18:34:14] 2026-03-15 17:33:19,869 | INFO     | zombie collector waiting for pid 3416792
[2026-03-15 18:34:14] 2026-03-15 17:33:19,869 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 18:34:14] 2026-03-15 17:33:19,869 | INFO     | collected zombie processes
[2026-03-15 18:34:14] 2026-03-15 17:33:19,869 | INFO     | will attempt to kill all subprocesses of pid=3416792
[2026-03-15 18:34:14] 2026-03-15 17:33:20,309 | INFO     | process IDs to be killed: [3416792] (in reverse order)
[2026-03-15 18:34:14] 2026-03-15 17:33:20,453 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 18:34:14] 2026-03-15 17:33:20,453 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 18:34:14] 2026-03-15 17:33:20,467 | INFO     | did not find any defunct processes belonging to 3416792
[2026-03-15 18:34:14] 2026-03-15 17:33:20,481 | INFO     | did not find any defunct processes belonging to 3416792
[2026-03-15 18:34:14] 2026-03-15 17:33:20,481 | INFO     | ready for new job
[2026-03-15 18:34:14] 2026-03-15 17:33:20,481 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 18:34:14] 2026-03-15 17:33:20,484 | INFO     | **************************************
[2026-03-15 18:34:14] 2026-03-15 17:33:20,484 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 18:34:14] 2026-03-15 17:33:20,484 | INFO     | **************************************
[2026-03-15 18:34:14] 2026-03-15 17:33:20,484 | INFO     | 
[2026-03-15 18:34:14] 2026-03-15 17:33:20,489 | INFO     | architecture information:
[2026-03-15 18:34:14] 2026-03-15 17:33:20,489 | INFO     | executing command: cat /etc/os-release
[2026-03-15 18:34:14] 2026-03-15 17:33:20,506 | INFO     | cat /etc/os-release:
[2026-03-15 18:34:14] NAME="CentOS Linux"
[2026-03-15 18:34:14] VERSION="7 (Core)"
[2026-03-15 18:34:14] ID="centos"
[2026-03-15 18:34:14] ID_LIKE="rhel fedora"
[2026-03-15 18:34:14] VERSION_ID="7"
[2026-03-15 18:34:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 18:34:14] ANSI_COLOR="0;31"
[2026-03-15 18:34:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 18:34:14] HOME_URL="https://www.centos.org/"
[2026-03-15 18:34:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 18:34:14] 
[2026-03-15 18:34:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 18:34:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 18:34:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 18:34:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 18:34:14] 
[2026-03-15 18:34:14] 2026-03-15 17:33:20,507 | INFO     | **************************************
[2026-03-15 18:34:14] 2026-03-15 17:33:21,010 | INFO     | executing command: df -mP /var/lib/boinc/var/slot28/slots/0
[2026-03-15 18:34:14] 2026-03-15 17:33:21,029 | INFO     | sufficient remaining disk space (36233543680 B)
[2026-03-15 18:34:14] 2026-03-15 17:33:21,029 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 18:34:14] 2026-03-15 17:33:21,030 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 18:34:14] 2026-03-15 17:33:21,030 | INFO     | update_server=False
[2026-03-15 18:34:14] 2026-03-15 17:33:21,030 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 18:34:14] 2026-03-15 17:33:21,030 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 18:34:14] 2026-03-15 17:33:21,175 | INFO     | all data control threads have been joined
[2026-03-15 18:34:14] 2026-03-15 17:33:21,258 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-15 18:34:14] 2026-03-15 17:33:21,259 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-15 18:34:14] 2026-03-15 17:33:21,259 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 18:34:14] 2026-03-15 17:33:21,259 | INFO     | will abort loop
[2026-03-15 18:34:14] 2026-03-15 17:33:21,691 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 18:34:14] 2026-03-15 17:33:21,852 | INFO     | all payload control threads have been joined
[2026-03-15 18:34:14] 2026-03-15 17:33:22,035 | INFO     | [job] retrieve thread has finished
[2026-03-15 18:34:14] 2026-03-15 17:33:22,073 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 18:34:14] 2026-03-15 17:33:22,181 | INFO     | [data] control thread has finished
[2026-03-15 18:34:14] 2026-03-15 17:33:22,265 | INFO     | [job] job monitor thread has finished
[2026-03-15 18:34:14] 2026-03-15 17:33:22,581 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 18:34:14] 2026-03-15 17:33:22,605 | INFO     | all job control threads have been joined
[2026-03-15 18:34:14] 2026-03-15 17:33:22,857 | INFO     | [payload] control thread has finished
[2026-03-15 18:34:14] 2026-03-15 17:33:22,897 | INFO     | [payload] validate_post thread has finished
[2026-03-15 18:34:14] 2026-03-15 17:33:23,036 | INFO     | [data] copytool_out thread has finished
[2026-03-15 18:34:14] 2026-03-15 17:33:23,079 | INFO     | [job] validate thread has finished
[2026-03-15 18:34:14] 2026-03-15 17:33:23,086 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 18:34:14] 2026-03-15 17:33:23,155 | INFO     | [payload] failed_post thread has finished
[2026-03-15 18:34:14] 2026-03-15 17:33:23,508 | INFO     | [data] copytool_in thread has finished
[2026-03-15 18:34:14] 2026-03-15 17:33:23,611 | INFO     | [job] control thread has finished
[2026-03-15 18:34:14] 2026-03-15 17:33:23,694 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 18:34:14] 2026-03-15 17:33:24,700 | INFO     | [job] queue monitor thread has finished
[2026-03-15 18:34:14] 2026-03-15 17:33:25,697 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 18:34:14] 2026-03-15 17:33:31,888 | INFO     | job.realtimelogging is not enabled
[2026-03-15 18:34:14] 2026-03-15 17:33:32,893 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 18:34:14] 2026-03-15 17:33:51,359 | INFO     | PID=3411653 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 18:34:14] 2026-03-15 17:33:51,359 | INFO     | .. there are 12 such processes running
[2026-03-15 18:34:14] 2026-03-15 17:33:51,361 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 18:34:14] 2026-03-15 17:33:51,361 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 18:34:14] 2026-03-15 17:33:51,361 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 18:34:14] 2026-03-15 17:34:08,567 | INFO     | [monitor] cgroup control has ended
[2026-03-15 18:34:14] 2026-03-15 17:34:09,014 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23062040774464)>', '<ExcThread(monitor, started 23061794649856)>']
[2026-03-15 18:34:14] 2026-03-15 17:34:09,450 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 18:34:14] 2026-03-15 17:34:09,451 | INFO     | [monitor] control thread has ended
[2026-03-15 18:34:14] 2026-03-15 17:34:14,038 | INFO     | all workflow threads have been joined
[2026-03-15 18:34:14] 2026-03-15 17:34:14,039 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 18:34:14] 2026-03-15 17:34:14,039 | INFO     | traces error code: 0
[2026-03-15 18:34:14] 2026-03-15 17:34:14,039 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 18:34:14] 2026-03-15 17:34:14,242 [wrapper] ==== pilot stdout END ====
[2026-03-15 18:34:14] 2026-03-15 17:34:14,245 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 18:34:14] 2026-03-15 17:34:14,248 [wrapper] pilotpid: 3411653
[2026-03-15 18:34:14] 2026-03-15 17:34:14,251 [wrapper] Pilot exit status: 0
[2026-03-15 18:34:14] 2026-03-15 17:34:14,268 [wrapper] pandaids: 7045204268
[2026-03-15 18:34:14] 2026-03-15 17:34:14,359 [wrapper] cleanup supervisor_pilot 3646331 3411654
[2026-03-15 18:34:14] 2026-03-15 17:34:14,362 [wrapper] Test setup, not cleaning
[2026-03-15 18:34:14] 2026-03-15 17:34:14,364 [wrapper] apfmon messages muted
[2026-03-15 18:34:14] 2026-03-15 17:34:14,368 [wrapper] ==== wrapper stdout END ====
[2026-03-15 18:34:14] 2026-03-15 17:34:14,370 [wrapper] ==== wrapper stderr END ====
[2026-03-15 18:34:14]  *** Error codes and diagnostics ***
[2026-03-15 18:34:14]     "exeErrorCode": 0,
[2026-03-15 18:34:14]     "exeErrorDiag": "",
[2026-03-15 18:34:14]     "pilotErrorCode": 0,
[2026-03-15 18:34:14]     "pilotErrorDiag": "",
[2026-03-15 18:34:14]  *** Listing of results directory ***
[2026-03-15 18:34:14] total 613612
[2026-03-15 18:34:14] -rw-r--r--. 1 boinc boinc    585013 Mar 13 22:07 pilot3.tar.gz
[2026-03-15 18:34:14] -rwx------. 1 boinc boinc     36322 Mar 13 22:11 runpilot2-wrapper.sh
[2026-03-15 18:34:14] -rw-r--r--. 1 boinc boinc      5111 Mar 13 22:15 queuedata.json
[2026-03-15 18:34:14] -rw-r--r--. 1 boinc boinc       100 Mar 15 15:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 18:34:14] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 15:29 run_atlas
[2026-03-15 18:34:14] -rw-r--r--. 1 boinc boinc       105 Mar 15 15:29 job.xml
[2026-03-15 18:34:14] -rw-r--r--. 2 boinc boinc 436605651 Mar 15 15:29 EVNT.46701403._002485.pool.root.1
[2026-03-15 18:34:14] -rw-r--r--. 1 boinc boinc      6563 Mar 15 15:29 init_data.xml
[2026-03-15 18:34:14] -rw-r--r--. 2 boinc boinc     15845 Mar 15 15:29 start_atlas.sh
[2026-03-15 18:34:14] drwxrwx--x. 2 boinc boinc      4096 Mar 15 15:29 shared
[2026-03-15 18:34:14] -rw-r--r--. 2 boinc boinc    597528 Mar 15 15:29 input.tar.gz
[2026-03-15 18:34:14] -rw-r--r--. 1 boinc boinc         0 Mar 15 15:29 boinc_lockfile
[2026-03-15 18:34:14] -rw-r--r--. 1 boinc boinc      2571 Mar 15 15:29 pandaJob.out
[2026-03-15 18:34:14] -rw-------. 1 boinc boinc   1006481 Mar 15 15:29 agis_schedconf.cvmfs.json
[2026-03-15 18:34:14] -rw-------. 1 boinc boinc       452 Mar 15 15:29 workernode_map.json
[2026-03-15 18:34:14] drwx------. 5 boinc boinc      4096 Mar 15 15:29 pilot3
[2026-03-15 18:34:14] -rw-------. 1 boinc boinc 183973217 Mar 15 18:32 HITS.48955015._021386.pool.root.1
[2026-03-15 18:34:14] -rw-r--r--. 1 boinc boinc       531 Mar 15 18:32 boinc_task_state.xml
[2026-03-15 18:34:14] -rw-------. 1 boinc boinc      1048 Mar 15 18:33 memory_monitor_summary.json
[2026-03-15 18:34:14] -rw-------. 1 boinc boinc   1511579 Mar 15 18:33 agis_ddmendpoints.agis.ALL.json
[2026-03-15 18:34:14] -rw-------. 1 boinc boinc    355502 Mar 15 18:33 log.48955015._021386.job.log.tgz.1
[2026-03-15 18:34:14] -rw-------. 1 boinc boinc      6406 Mar 15 18:33 heartbeat.json
[2026-03-15 18:34:14] -rw-r--r--. 1 boinc boinc      8192 Mar 15 18:33 boinc_mmap_file
[2026-03-15 18:34:14] -rw-r--r--. 1 boinc boinc        28 Mar 15 18:33 wrapper_checkpoint.txt
[2026-03-15 18:34:14] -rw-------. 1 boinc boinc        95 Mar 15 18:33 pilot_heartbeat.json
[2026-03-15 18:34:14] -rw-------. 1 boinc boinc      5087 Mar 15 18:34 pilotlog.txt
[2026-03-15 18:34:14] -rw-------. 1 boinc boinc   1556593 Mar 15 18:34 log.48955015._021386.job.log.1
[2026-03-15 18:34:14] -rw-------. 1 boinc boinc       357 Mar 15 18:34 output.list
[2026-03-15 18:34:14] -rw-r--r--. 1 boinc boinc       620 Mar 15 18:34 runtime_log
[2026-03-15 18:34:14] -rw-------. 1 boinc boinc   1925120 Mar 15 18:34 result.tar.gz
[2026-03-15 18:34:14] -rw-r--r--. 1 boinc boinc      9205 Mar 15 18:34 runtime_log.err
[2026-03-15 18:34:14] -rw-------. 1 boinc boinc       665 Mar 15 18:34 5g5KDmFyOL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmDKoLDm1qrIsm.diag
[2026-03-15 18:34:14] -rw-r--r--. 1 boinc boinc     21097 Mar 15 18:34 stderr.txt
[2026-03-15 18:34:14] HITS file was successfully produced:
[2026-03-15 18:34:14] -rw-------. 1 boinc boinc 183973217 Mar 15 18:32 shared/HITS.pool.root.1
[2026-03-15 18:34:14]  *** Contents of shared directory: ***
[2026-03-15 18:34:14] total 608528
[2026-03-15 18:34:14] -rw-r--r--. 2 boinc boinc 436605651 Mar 15 15:29 ATLAS.root_0
[2026-03-15 18:34:14] -rw-r--r--. 2 boinc boinc     15845 Mar 15 15:29 start_atlas.sh
[2026-03-15 18:34:14] -rw-r--r--. 2 boinc boinc    597528 Mar 15 15:29 input.tar.gz
[2026-03-15 18:34:14] -rw-------. 1 boinc boinc 183973217 Mar 15 18:32 HITS.pool.root.1
[2026-03-15 18:34:14] -rw-------. 1 boinc boinc   1925120 Mar 15 18:34 result.tar.gz
18:34:16 (3407506): run_atlas exited; CPU time 41670.264113
18:34:16 (3407506): called boinc_finish(0)

</stderr_txt>
]]>

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