Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:36:13 (16622): wrapper (7.7.26015): starting
10:36:13 (16622): wrapper: running run_atlas (--nthreads 8)
[2026-03-14 10:36:13] Arguments: --nthreads 8
[2026-03-14 10:36:13] Threads: 8
[2026-03-14 10:36:13] Checking for CVMFS
[2026-03-14 10:36:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 10:36:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 10:36:16] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 10:36:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 10:36:18] 2.11.2.0 5634 127380 135392 157272 0 54 21434469 25165825 4784 130560 152 35753253 99.812 29869505 1022 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-14 10:36:18] CVMFS is ok
[2026-03-14 10:36:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 10:36:18] Checking for apptainer binary...
[2026-03-14 10:36:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 10:36:18] Running /usr/bin/apptainer --version
[2026-03-14 10:36:18] apptainer version 1.3.2-1.el7
[2026-03-14 10:36:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 10:36:28] cg-vwn416.simple-grid.lan
[2026-03-14 10:36:28] apptainer works
[2026-03-14 10:36:28] Set ATHENA_PROC_NUMBER=8
[2026-03-14 10:36:28] Set ATHENA_CORE_NUMBER=8
[2026-03-14 10:36:28] Starting ATLAS job with PandaID=7045157790
[2026-03-14 10:36:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 14:26:05]  *** The last 200 lines of the pilot log: ***
[2026-03-14 14:26:05] 2026-03-14 13:25:15,404 | INFO     | preparing for final server update for job 7045157790 in state='finished'
[2026-03-14 14:26:05] 2026-03-14 13:25:15,404 | INFO     | reading metadata from: /var/lib/boinc/slots/5/PanDA_Pilot-7045157790/jobReport.json
[2026-03-14 14:26:05] 2026-03-14 13:25:15,406 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/5/workernode_map.json
[2026-03-14 14:26:05] 2026-03-14 13:25:15,407 | INFO     | this job has now completed (state=finished)
[2026-03-14 14:26:05] 2026-03-14 13:25:15,407 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 14:26:05] 2026-03-14 13:25:15,407 | INFO     | log transfer has been attempted: DONE
[2026-03-14 14:26:05] 2026-03-14 13:25:15,407 | INFO     | job 7045157790 has finished - writing final server update
[2026-03-14 14:26:05] 2026-03-14 13:25:15,408 | INFO     | total number of processed events: 400 (read)
[2026-03-14 14:26:05] 2026-03-14 13:25:15,410 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-7045157790/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 14:26:05] 2026-03-14 13:25:15,410 | INFO     | extracted standard info from prmon json
[2026-03-14 14:26:05] 2026-03-14 13:25:15,411 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 14:26:05] 2026-03-14 13:25:15,411 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 14:26:05] 2026-03-14 13:25:15,411 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 14:26:05] 2026-03-14 13:25:15,411 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 14:26:05] 2026-03-14 13:25:15,416 | INFO     | fitting pss+swap vs Time
[2026-03-14 14:26:05] 2026-03-14 13:25:15,417 | INFO     | sum of square deviations: 3124858590.0
[2026-03-14 14:26:05] 2026-03-14 13:25:15,418 | INFO     | sum of deviations: 14641243424.00001
[2026-03-14 14:26:05] 2026-03-14 13:25:15,419 | INFO     | mean x: 1773488112.5
[2026-03-14 14:26:05] 2026-03-14 13:25:15,419 | INFO     | mean y: 2465215.7407407407
[2026-03-14 14:26:05] 2026-03-14 13:25:15,419 | INFO     | intersect: -8307053572.654357
[2026-03-14 14:26:05] 2026-03-14 13:25:15,419 | INFO     | chi2: 4.168084485785862
[2026-03-14 14:26:05] 2026-03-14 13:25:15,420 | INFO     | sum of square deviations: 2912836010.0
[2026-03-14 14:26:05] 2026-03-14 13:25:15,421 | INFO     | sum of deviations: 28516211069.999992
[2026-03-14 14:26:05] 2026-03-14 13:25:15,422 | INFO     | mean x: 1773487960.0
[2026-03-14 14:26:05] 2026-03-14 13:25:15,422 | INFO     | mean y: 2475004.18957346
[2026-03-14 14:26:05] 2026-03-14 13:25:15,422 | INFO     | intersect: -17359696029.072166
[2026-03-14 14:26:05] 2026-03-14 13:25:15,422 | INFO     | chi2: 3.4295348628016322
[2026-03-14 14:26:05] 2026-03-14 13:25:15,423 | INFO     | current chi2=3.4295348628016322 (change=17.71916153578114 %)
[2026-03-14 14:26:05] 2026-03-14 13:25:15,423 | INFO     | right removable region: 210
[2026-03-14 14:26:05] 2026-03-14 13:25:15,423 | INFO     | sum of square deviations: 2912836010.0
[2026-03-14 14:26:05] 2026-03-14 13:25:15,425 | INFO     | sum of deviations: -43192597570.0
[2026-03-14 14:26:05] 2026-03-14 13:25:15,425 | INFO     | mean x: 1773488265.0
[2026-03-14 14:26:05] 2026-03-14 13:25:15,425 | INFO     | mean y: 2506602.843601896
[2026-03-14 14:26:05] 2026-03-14 13:25:15,425 | INFO     | intersect: 26300439154.58465
[2026-03-14 14:26:05] 2026-03-14 13:25:15,426 | INFO     | chi2: 1.0118137232142501
[2026-03-14 14:26:05] 2026-03-14 13:25:15,426 | INFO     | current chi2=1.0118137232142501 (change=75.72473094859832 %)
[2026-03-14 14:26:05] 2026-03-14 13:25:15,426 | INFO     | sum of square deviations: 2710627567.5
[2026-03-14 14:26:05] 2026-03-14 13:25:15,428 | INFO     | sum of deviations: -46986176956.00001
[2026-03-14 14:26:05] 2026-03-14 13:25:15,428 | INFO     | mean x: 1773488417.5
[2026-03-14 14:26:05] 2026-03-14 13:25:15,429 | INFO     | mean y: 2509408.4077669904
[2026-03-14 14:26:05] 2026-03-14 13:25:15,429 | INFO     | intersect: 30744261470.98485
[2026-03-14 14:26:05] 2026-03-14 13:25:15,429 | INFO     | chi2: 0.9577839382126134
[2026-03-14 14:26:05] 2026-03-14 13:25:15,429 | INFO     | current chi2=0.9577839382126134 (change=5.33989446496131 %)
[2026-03-14 14:26:05] 2026-03-14 13:25:15,429 | INFO     | left removable region: 20
[2026-03-14 14:26:05] 2026-03-14 13:25:15,430 | INFO     | sum of square deviations: 2126802667.5
[2026-03-14 14:26:05] 2026-03-14 13:25:15,431 | INFO     | sum of deviations: -19365139391.5
[2026-03-14 14:26:05] 2026-03-14 13:25:15,431 | INFO     | mean x: 1773488539.5
[2026-03-14 14:26:05] 2026-03-14 13:25:15,431 | INFO     | mean y: 2509850.7736842106
[2026-03-14 14:26:05] 2026-03-14 13:25:15,432 | INFO     | intersect: 16150624248.718998
[2026-03-14 14:26:05] 2026-03-14 13:25:15,432 | INFO     | chi2: 0.13636273535269638
[2026-03-14 14:26:05] 2026-03-14 13:25:15,432 | INFO     | current memory leak: -9.11 B/s (using 190 data points, chi2=0.14)
[2026-03-14 14:26:05] 2026-03-14 13:25:15,433 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-03-14 14:26:05] 2026-03-14 13:25:15,433 | INFO     | ..............................
[2026-03-14 14:26:05] 2026-03-14 13:25:15,433 | INFO     | . Timing measurements:
[2026-03-14 14:26:05] 2026-03-14 13:25:15,433 | INFO     | . get job = 0 s
[2026-03-14 14:26:05] 2026-03-14 13:25:15,433 | INFO     | . initial setup = 91 s
[2026-03-14 14:26:05] 2026-03-14 13:25:15,433 | INFO     | . payload setup = 131 s
[2026-03-14 14:26:05] 2026-03-14 13:25:15,434 | INFO     | . stage-in = 0 s
[2026-03-14 14:26:05] 2026-03-14 13:25:15,434 | INFO     | . payload execution = 13277 s
[2026-03-14 14:26:05] 2026-03-14 13:25:15,434 | INFO     | . stage-out = 3 s
[2026-03-14 14:26:05] 2026-03-14 13:25:15,434 | INFO     | . log creation = 1 s
[2026-03-14 14:26:05] 2026-03-14 13:25:15,434 | INFO     | ..............................
[2026-03-14 14:26:05] 2026-03-14 13:25:15,562 | INFO     | 
[2026-03-14 14:26:05] 2026-03-14 13:25:15,562 | INFO     | job summary report
[2026-03-14 14:26:05] 2026-03-14 13:25:15,562 | INFO     | --------------------------------------------------
[2026-03-14 14:26:05] 2026-03-14 13:25:15,563 | INFO     | PanDA job id: 7045157790
[2026-03-14 14:26:05] 2026-03-14 13:25:15,563 | INFO     | task id: 48955010
[2026-03-14 14:26:05] 2026-03-14 13:25:15,563 | INFO     | errors: (none)
[2026-03-14 14:26:05] 2026-03-14 13:25:15,563 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 14:26:05] 2026-03-14 13:25:15,563 | INFO     | pilot state: finished 
[2026-03-14 14:26:05] 2026-03-14 13:25:15,563 | INFO     | transexitcode: 0
[2026-03-14 14:26:05] 2026-03-14 13:25:15,563 | INFO     | exeerrorcode: 0
[2026-03-14 14:26:05] 2026-03-14 13:25:15,563 | INFO     | exeerrordiag: 
[2026-03-14 14:26:05] 2026-03-14 13:25:15,563 | INFO     | exitcode: 0
[2026-03-14 14:26:05] 2026-03-14 13:25:15,564 | INFO     | exitmsg: OK
[2026-03-14 14:26:05] 2026-03-14 13:25:15,564 | INFO     | cpuconsumptiontime: 51564 s
[2026-03-14 14:26:05] 2026-03-14 13:25:15,564 | INFO     | nevents: 400
[2026-03-14 14:26:05] 2026-03-14 13:25:15,564 | INFO     | neventsw: 0
[2026-03-14 14:26:05] 2026-03-14 13:25:15,564 | INFO     | pid: 25189
[2026-03-14 14:26:05] 2026-03-14 13:25:15,564 | INFO     | pgrp: 25189
[2026-03-14 14:26:05] 2026-03-14 13:25:15,564 | INFO     | corecount: 8
[2026-03-14 14:26:05] 2026-03-14 13:25:15,564 | INFO     | event service: False
[2026-03-14 14:26:05] 2026-03-14 13:25:15,564 | INFO     | sizes: {0: 2279692, 1: 2280209, 2: 2280209, 13413: 2310359, 13417: 2319357, 13419: 2319413, 13421: 2319735}
[2026-03-14 14:26:05] 2026-03-14 13:25:15,564 | INFO     | --------------------------------------------------
[2026-03-14 14:26:05] 2026-03-14 13:25:15,564 | INFO     | 
[2026-03-14 14:26:05] 2026-03-14 13:25:15,565 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-03-14 14:26:05] 2026-03-14 13:25:16,083 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 14:26:05] 2026-03-14 13:25:16,083 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 14:26:05] 2026-03-14 13:25:16,083 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 14:26:05] 2026-03-14 13:25:16,083 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 14:26:05] 2026-03-14 13:25:16,084 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 14:26:05] 2026-03-14 13:25:16,084 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 14:26:05] 2026-03-14 13:25:16,084 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 14:26:05] 2026-03-14 13:25:16,084 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 14:26:05] 2026-03-14 13:25:16,084 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 14:26:05] 2026-03-14 13:25:16,084 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 14:26:05] 2026-03-14 13:25:16,084 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 14:26:05] 2026-03-14 13:25:16,084 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 14:26:05] 2026-03-14 13:25:16,084 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 14:26:05] 2026-03-14 13:25:16,085 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 14:26:05] 2026-03-14 13:25:16,085 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 14:26:05] 2026-03-14 13:25:16,085 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 14:26:05] 2026-03-14 13:25:16,085 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 14:26:05] 2026-03-14 13:25:16,085 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 14:26:05] 2026-03-14 13:25:16,085 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 14:26:05] 2026-03-14 13:25:16,085 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 14:26:05] 2026-03-14 13:25:16,085 | INFO     | job 7045157790 has completed (purged errors)
[2026-03-14 14:26:05] 2026-03-14 13:25:16,086 | INFO     | overall cleanup function is called
[2026-03-14 14:26:05] 2026-03-14 13:25:17,094 | INFO     | --- collectZombieJob: --- 10, [25189]
[2026-03-14 14:26:05] 2026-03-14 13:25:17,094 | INFO     | zombie collector waiting for pid 25189
[2026-03-14 14:26:05] 2026-03-14 13:25:17,095 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 14:26:05] 2026-03-14 13:25:17,095 | INFO     | collected zombie processes
[2026-03-14 14:26:05] 2026-03-14 13:25:17,095 | INFO     | will attempt to kill all subprocesses of pid=25189
[2026-03-14 14:26:05] 2026-03-14 13:25:17,205 | INFO     | process IDs to be killed: [25189] (in reverse order)
[2026-03-14 14:26:05] 2026-03-14 13:25:17,697 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 14:26:05] 2026-03-14 13:25:17,697 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 14:26:05] 2026-03-14 13:25:17,700 | INFO     | did not find any defunct processes belonging to 25189
[2026-03-14 14:26:05] 2026-03-14 13:25:17,703 | INFO     | did not find any defunct processes belonging to 25189
[2026-03-14 14:26:05] 2026-03-14 13:25:17,704 | INFO     | ready for new job
[2026-03-14 14:26:05] 2026-03-14 13:25:17,704 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 14:26:05] 2026-03-14 13:25:17,706 | INFO     | **************************************
[2026-03-14 14:26:05] 2026-03-14 13:25:17,706 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 14:26:05] 2026-03-14 13:25:17,706 | INFO     | **************************************
[2026-03-14 14:26:05] 2026-03-14 13:25:17,706 | INFO     | 
[2026-03-14 14:26:05] 2026-03-14 13:25:17,707 | INFO     | pilot is running in a VM
[2026-03-14 14:26:05] 2026-03-14 13:25:17,707 | INFO     | architecture information:
[2026-03-14 14:26:05] 2026-03-14 13:25:17,711 | INFO     | executing command: cat /etc/os-release
[2026-03-14 14:26:05] 2026-03-14 13:25:18,006 | INFO     | cat /etc/os-release:
[2026-03-14 14:26:05] NAME="CentOS Linux"
[2026-03-14 14:26:05] VERSION="7 (Core)"
[2026-03-14 14:26:05] ID="centos"
[2026-03-14 14:26:05] ID_LIKE="rhel fedora"
[2026-03-14 14:26:05] VERSION_ID="7"
[2026-03-14 14:26:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 14:26:05] ANSI_COLOR="0;31"
[2026-03-14 14:26:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 14:26:05] HOME_URL="https://www.centos.org/"
[2026-03-14 14:26:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 14:26:05] 
[2026-03-14 14:26:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 14:26:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 14:26:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 14:26:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 14:26:05] 
[2026-03-14 14:26:05] 2026-03-14 13:25:18,006 | INFO     | **************************************
[2026-03-14 14:26:05] 2026-03-14 13:25:18,509 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-03-14 14:26:05] 2026-03-14 13:25:18,730 | INFO     | sufficient remaining disk space (495142830080 B)
[2026-03-14 14:26:05] 2026-03-14 13:25:18,730 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 14:26:05] 2026-03-14 13:25:18,730 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 14:26:05] 2026-03-14 13:25:18,730 | INFO     | update_server=False
[2026-03-14 14:26:05] 2026-03-14 13:25:18,730 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 14:26:05] 2026-03-14 13:25:18,771 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 14:26:05] 2026-03-14 13:25:19,123 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-14 14:26:05] 2026-03-14 13:25:19,123 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-14 14:26:05] 2026-03-14 13:25:19,124 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 14:26:05] 2026-03-14 13:25:19,124 | INFO     | will abort loop
[2026-03-14 14:26:05] 2026-03-14 13:25:19,452 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 14:26:05] 2026-03-14 13:25:19,592 | INFO     | all payload control threads have been joined
[2026-03-14 14:26:05] 2026-03-14 13:25:19,604 | INFO     | all data control threads have been joined
[2026-03-14 14:26:05] 2026-03-14 13:25:19,736 | INFO     | [job] retrieve thread has finished
[2026-03-14 14:26:05] 2026-03-14 13:25:19,932 | INFO     | all job control threads have been joined
[2026-03-14 14:26:05] 2026-03-14 13:25:20,129 | INFO     | [job] job monitor thread has finished
[2026-03-14 14:26:05] 2026-03-14 13:25:20,262 | INFO     | [payload] failed_post thread has finished
[2026-03-14 14:26:05] 2026-03-14 13:25:20,266 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 14:26:05] 2026-03-14 13:25:20,390 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 14:26:05] 2026-03-14 13:25:20,527 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 14:26:05] 2026-03-14 13:25:20,580 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 14:26:05] 2026-03-14 13:25:20,598 | INFO     | [payload] control thread has finished
[2026-03-14 14:26:05] 2026-03-14 13:25:20,599 | INFO     | [job] validate thread has finished
[2026-03-14 14:26:05] 2026-03-14 13:25:20,610 | INFO     | [data] control thread has finished
[2026-03-14 14:26:05] 2026-03-14 13:25:20,778 | INFO     | [data] copytool_out thread has finished
[2026-03-14 14:26:05] 2026-03-14 13:25:20,793 | INFO     | [data] copytool_in thread has finished
[2026-03-14 14:26:05] 2026-03-14 13:25:20,919 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 14:26:05] 2026-03-14 13:25:20,938 | INFO     | [job] control thread has finished
[2026-03-14 14:26:05] 2026-03-14 13:25:21,224 | INFO     | [payload] validate_post thread has finished
[2026-03-14 14:26:05] 2026-03-14 13:25:21,586 | INFO     | [job] queue monitor thread has finished
[2026-03-14 14:26:05] 2026-03-14 13:25:23,461 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 14:26:05] 2026-03-14 13:25:48,337 | INFO     | PID=20715 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-14 14:26:05] 2026-03-14 13:25:48,337 | INFO     | .. there are 9 such processes running
[2026-03-14 14:26:05] 2026-03-14 13:25:48,337 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 14:26:05] 2026-03-14 13:25:48,338 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 14:26:05] 2026-03-14 13:25:48,338 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 14:26:05] 2026-03-14 13:25:55,081 | INFO     | [monitor] cgroup control has ended
[2026-03-14 14:26:05] 2026-03-14 13:25:56,483 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140246682662720)>', '<ExcThread(monitor, started 140246251468544)>']
[2026-03-14 14:26:05] 2026-03-14 13:25:57,390 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 14:26:05] 2026-03-14 13:25:57,390 | INFO     | [monitor] control thread has ended
[2026-03-14 14:26:05] 2026-03-14 13:26:01,509 | INFO     | all workflow threads have been joined
[2026-03-14 14:26:05] 2026-03-14 13:26:01,509 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 14:26:05] 2026-03-14 13:26:01,510 | INFO     | traces error code: 0
[2026-03-14 14:26:05] 2026-03-14 13:26:01,510 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 14:26:05] 2026-03-14 13:26:01,642 [wrapper] ==== pilot stdout END ====
[2026-03-14 14:26:05] 2026-03-14 13:26:01,648 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 14:26:05] 2026-03-14 13:26:01,658 [wrapper] pilotpid: 20715
[2026-03-14 14:26:05] 2026-03-14 13:26:01,673 [wrapper] Pilot exit status: 0
[2026-03-14 14:26:05] 2026-03-14 13:26:02,179 [wrapper] pandaids: 7045157790
[2026-03-14 14:26:05] 2026-03-14 13:26:03,273 [wrapper] cleanup supervisor_pilot   774 20716
[2026-03-14 14:26:05] 2026-03-14 13:26:03,365 [wrapper] Test setup, not cleaning
[2026-03-14 14:26:05] 2026-03-14 13:26:03,479 [wrapper] apfmon messages muted
[2026-03-14 14:26:05] 2026-03-14 13:26:03,521 [wrapper] ==== wrapper stdout END ====
[2026-03-14 14:26:05] 2026-03-14 13:26:03,603 [wrapper] ==== wrapper stderr END ====
[2026-03-14 14:26:05]  *** Error codes and diagnostics ***
[2026-03-14 14:26:05]     "exeErrorCode": 0,
[2026-03-14 14:26:05]     "exeErrorDiag": "",
[2026-03-14 14:26:05]     "pilotErrorCode": 0,
[2026-03-14 14:26:05]     "pilotErrorDiag": "",
[2026-03-14 14:26:05]  *** Listing of results directory ***
[2026-03-14 14:26:05] total 612120
[2026-03-14 14:26:05] -rw-r--r--. 1 boinc boinc    585013 Mar 13 22:07 pilot3.tar.gz
[2026-03-14 14:26:05] -rwx------. 1 boinc boinc     36322 Mar 13 22:10 runpilot2-wrapper.sh
[2026-03-14 14:26:05] -rw-r--r--. 1 boinc boinc      5111 Mar 13 22:12 queuedata.json
[2026-03-14 14:26:05] -rw-r--r--. 1 boinc boinc       100 Mar 14 10:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 14:26:05] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 10:36 run_atlas
[2026-03-14 14:26:05] -rw-r--r--. 1 boinc boinc       105 Mar 14 10:36 job.xml
[2026-03-14 14:26:05] -rw-r--r--. 1 boinc boinc      6391 Mar 14 10:36 init_data.xml
[2026-03-14 14:26:05] -rw-r--r--. 2 boinc boinc 436967900 Mar 14 10:36 EVNT.46701403._001668.pool.root.1
[2026-03-14 14:26:05] -rw-r--r--. 2 boinc boinc     15845 Mar 14 10:36 start_atlas.sh
[2026-03-14 14:26:05] drwxrwx--x. 2 boinc boinc        68 Mar 14 10:36 shared
[2026-03-14 14:26:05] -rw-r--r--. 2 boinc boinc    597525 Mar 14 10:36 input.tar.gz
[2026-03-14 14:26:05] -rw-r--r--. 1 boinc boinc         0 Mar 14 10:36 boinc_lockfile
[2026-03-14 14:26:05] -rw-r--r--. 1 boinc boinc      2564 Mar 14 10:36 pandaJob.out
[2026-03-14 14:26:05] -rw-------. 1 boinc boinc       415 Mar 14 10:41 workernode_map.json
[2026-03-14 14:26:05] -rw-------. 1 boinc boinc   1004579 Mar 14 10:41 agis_schedconf.cvmfs.json
[2026-03-14 14:26:05] drwx------. 5 boinc boinc      4096 Mar 14 10:41 pilot3
[2026-03-14 14:26:05] -rw-------. 1 boinc boinc 181206605 Mar 14 14:23 HITS.48955010._033727.pool.root.1
[2026-03-14 14:26:05] -rw-r--r--. 1 boinc boinc       531 Mar 14 14:24 boinc_task_state.xml
[2026-03-14 14:26:05] -rw-------. 1 boinc boinc      1013 Mar 14 14:25 memory_monitor_summary.json
[2026-03-14 14:26:05] -rw-------. 1 boinc boinc   1511579 Mar 14 14:25 agis_ddmendpoints.agis.ALL.json
[2026-03-14 14:26:05] -rw-------. 1 boinc boinc    487202 Mar 14 14:25 log.48955010._033727.job.log.tgz.1
[2026-03-14 14:26:05] -rw-------. 1 boinc boinc        95 Mar 14 14:25 pilot_heartbeat.json
[2026-03-14 14:26:05] -rw-------. 1 boinc boinc      6324 Mar 14 14:25 heartbeat.json
[2026-03-14 14:26:05] -rw-r--r--. 1 boinc boinc      8192 Mar 14 14:25 boinc_mmap_file
[2026-03-14 14:26:05] -rw-r--r--. 1 boinc boinc        28 Mar 14 14:25 wrapper_checkpoint.txt
[2026-03-14 14:26:05] -rw-------. 1 boinc boinc      5066 Mar 14 14:26 pilotlog.txt
[2026-03-14 14:26:05] -rw-------. 1 boinc boinc   1875452 Mar 14 14:26 log.48955010._033727.job.log.1
[2026-03-14 14:26:05] -rw-------. 1 boinc boinc       357 Mar 14 14:26 output.list
[2026-03-14 14:26:05] -rw-r--r--. 1 boinc boinc       620 Mar 14 14:26 runtime_log
[2026-03-14 14:26:05] -rw-------. 1 boinc boinc   2375680 Mar 14 14:26 result.tar.gz
[2026-03-14 14:26:05] -rw-r--r--. 1 boinc boinc      8816 Mar 14 14:26 runtime_log.err
[2026-03-14 14:26:05] -rw-------. 1 boinc boinc       655 Mar 14 14:26 0HENDmHxOL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmCHoLDmQhaS0n.diag
[2026-03-14 14:26:05] -rw-r--r--. 1 boinc boinc     20863 Mar 14 14:26 stderr.txt
[2026-03-14 14:26:05] HITS file was successfully produced:
[2026-03-14 14:26:05] -rw-------. 1 boinc boinc 181206605 Mar 14 14:23 shared/HITS.pool.root.1
[2026-03-14 14:26:05]  *** Contents of shared directory: ***
[2026-03-14 14:26:05] total 606608
[2026-03-14 14:26:05] -rw-r--r--. 2 boinc boinc 436967900 Mar 14 10:36 ATLAS.root_0
[2026-03-14 14:26:05] -rw-r--r--. 2 boinc boinc     15845 Mar 14 10:36 start_atlas.sh
[2026-03-14 14:26:05] -rw-r--r--. 2 boinc boinc    597525 Mar 14 10:36 input.tar.gz
[2026-03-14 14:26:05] -rw-------. 1 boinc boinc 181206605 Mar 14 14:23 HITS.pool.root.1
[2026-03-14 14:26:05] -rw-------. 1 boinc boinc   2375680 Mar 14 14:26 result.tar.gz
14:26:07 (16622): run_atlas exited; CPU time 51770.035629
14:26:07 (16622): called boinc_finish(0)

</stderr_txt>
]]>

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