Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:51:30 (957060): wrapper (7.7.26015): starting
19:51:30 (957060): wrapper: running run_atlas (--nthreads 4)
[2026-03-14 19:51:30] Arguments: --nthreads 4
[2026-03-14 19:51:30] Threads: 4
[2026-03-14 19:51:30] Checking for CVMFS
[2026-03-14 19:51:30] No cvmfs_config command found, will try listing directly
[2026-03-14 19:51:30] CVMFS is ok
[2026-03-14 19:51:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 19:51:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 19:51:30] Further information can be found at the LHC@home message board.
[2026-03-14 19:51:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 19:51:30] Checking for apptainer binary...
[2026-03-14 19:51:30] which: no apptainer in ((null))
[2026-03-14 19:51:30] apptainer is not installed, using version from CVMFS
[2026-03-14 19:51:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 19:51:30] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot104/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-03-14 19:51:30] apptainer works
[2026-03-14 19:51:30] Set ATHENA_PROC_NUMBER=4
[2026-03-14 19:51:30] Set ATHENA_CORE_NUMBER=4
[2026-03-14 19:51:31] Starting ATLAS job with PandaID=7044629805
[2026-03-14 19:51:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot104/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 21:14:01]  *** The last 200 lines of the pilot log: ***
[2026-03-14 21:14:01]  is_altstaged=None
[2026-03-14 21:14:01]  is_tar=False
[2026-03-14 21:14:01]  lfn=log.48955010._032162.job.log.tgz.1
[2026-03-14 21:14:01]  mtime=0
[2026-03-14 21:14:01]  protocol_id=None
[2026-03-14 21:14:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-14 21:14:01]  replicas=None
[2026-03-14 21:14:01]  scope=mc23_13p6TeV
[2026-03-14 21:14:01]  status=None
[2026-03-14 21:14:01]  status_code=0
[2026-03-14 21:14:01]  storage_token=
[2026-03-14 21:14:01]  surl=/var/lib/boinc/var/slot104/slots/1/PanDA_Pilot-7044629805/log.48955010._032162.job.log.tgz.1
[2026-03-14 21:14:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8b/4d/log.48955010._032162.job.log.tgz.1
[2026-03-14 21:14:01]  workdir=None
[2026-03-14 21:14:01] ]
[2026-03-14 21:14:01] 2026-03-14 20:13:17,381 | INFO     | transferring file log.48955010._032162.job.log.tgz.1 from /var/lib/boinc/var/slot104/slots/1/PanDA_Pilot-7044629805/log.48955010._032162.job.log.tgz.1 to /var/lib/
[2026-03-14 21:14:01] 2026-03-14 20:13:17,381 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot104/slots/1/PanDA_Pilot-7044629805/log.48955010._032162.job.log.tgz.1 /var/lib/boinc/var/slot104/slots/1/
[2026-03-14 21:14:01] 2026-03-14 20:13:17,425 | INFO     | adding to output.list: log.48955010._032162.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8b/4d/log.48955010._032162.job.log.tg
[2026-03-14 21:14:01] 2026-03-14 20:13:17,426 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-14 21:14:01] 2026-03-14 20:13:17,426 | INFO     | summary of transferred files:
[2026-03-14 21:14:01] 2026-03-14 20:13:17,426 | INFO     |  -- lfn=log.48955010._032162.job.log.tgz.1, status_code=0, status=transferred
[2026-03-14 21:14:01] 2026-03-14 20:13:17,426 | INFO     | stage-out finished correctly
[2026-03-14 21:14:01] 2026-03-14 20:13:19,135 | INFO     | time since job start (4892s) is within the limit (345600.0s)
[2026-03-14 21:14:01] 2026-03-14 20:13:19,810 | INFO     | monitor loop #352: job 0:7044629805 is in state 'finished'
[2026-03-14 21:14:01] 2026-03-14 20:13:19,810 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-14 21:14:01] 2026-03-14 20:13:20,794 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 21:14:01] 2026-03-14 20:13:21,142 | INFO     | time since job start (4894s) is within the limit (345600.0s)
[2026-03-14 21:14:01] 2026-03-14 20:13:21,754 | INFO     | job 7044629805 has state=finished
[2026-03-14 21:14:01] 2026-03-14 20:13:21,754 | INFO     | preparing for final server update for job 7044629805 in state='finished'
[2026-03-14 21:14:01] 2026-03-14 20:13:21,755 | INFO     | reading metadata from: /var/lib/boinc/var/slot104/slots/1/PanDA_Pilot-7044629805/jobReport.json
[2026-03-14 21:14:01] 2026-03-14 20:13:21,756 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot104/slots/1/workernode_map.json
[2026-03-14 21:14:01] 2026-03-14 20:13:21,756 | INFO     | this job has now completed (state=finished)
[2026-03-14 21:14:01] 2026-03-14 20:13:21,756 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 21:14:01] 2026-03-14 20:13:21,756 | INFO     | log transfer has been attempted: DONE
[2026-03-14 21:14:01] 2026-03-14 20:13:21,756 | INFO     | job 7044629805 has finished - writing final server update
[2026-03-14 21:14:01] 2026-03-14 20:13:21,756 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2592554/.job.ad'
[2026-03-14 21:14:01] 2026-03-14 20:13:21,756 | INFO     | total number of processed events: 400 (read)
[2026-03-14 21:14:01] 2026-03-14 20:13:21,774 | INFO     | using path: /var/lib/boinc/var/slot104/slots/1/PanDA_Pilot-7044629805/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 21:14:01] 2026-03-14 20:13:21,775 | INFO     | extracted standard info from prmon json
[2026-03-14 21:14:01] 2026-03-14 20:13:21,775 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 21:14:01] 2026-03-14 20:13:21,775 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 21:14:01] 2026-03-14 20:13:21,775 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 21:14:01] 2026-03-14 20:13:21,775 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 21:14:01] 2026-03-14 20:13:21,776 | INFO     | fitting pss+swap vs Time
[2026-03-14 21:14:01] 2026-03-14 20:13:21,776 | INFO     | sum of square deviations: 120605052.0
[2026-03-14 21:14:01] 2026-03-14 20:13:21,776 | INFO     | sum of deviations: 675265485.9999999
[2026-03-14 21:14:01] 2026-03-14 20:13:21,776 | INFO     | mean x: 1773516832.0
[2026-03-14 21:14:01] 2026-03-14 20:13:21,776 | INFO     | mean y: 2306476.506849315
[2026-03-14 21:14:01] 2026-03-14 20:13:21,776 | INFO     | intersect: -9927581912.328306
[2026-03-14 21:14:01] 2026-03-14 20:13:21,776 | INFO     | chi2: 0.00010689519973882402
[2026-03-14 21:14:01] 2026-03-14 20:13:21,776 | INFO     | current memory leak: 5.60 B/s (using 73 data points, chi2=0.00)
[2026-03-14 21:14:01] 2026-03-14 20:13:21,777 | INFO     | could have reported an average CPU frequency of 3548 MHz (6 samples)
[2026-03-14 21:14:01] 2026-03-14 20:13:21,777 | INFO     | ..............................
[2026-03-14 21:14:01] 2026-03-14 20:13:21,777 | INFO     | . Timing measurements:
[2026-03-14 21:14:01] 2026-03-14 20:13:21,777 | INFO     | . get job = 0 s
[2026-03-14 21:14:01] 2026-03-14 20:13:21,777 | INFO     | . initial setup = 7 s
[2026-03-14 21:14:01] 2026-03-14 20:13:21,777 | INFO     | . payload setup = 6 s
[2026-03-14 21:14:01] 2026-03-14 20:13:21,777 | INFO     | . stage-in = 0 s
[2026-03-14 21:14:01] 2026-03-14 20:13:21,777 | INFO     | . payload execution = 4867 s
[2026-03-14 21:14:01] 2026-03-14 20:13:21,777 | INFO     | . stage-out = 0 s
[2026-03-14 21:14:01] 2026-03-14 20:13:21,777 | INFO     | . log creation = 0 s
[2026-03-14 21:14:01] 2026-03-14 20:13:21,777 | INFO     | ..............................
[2026-03-14 21:14:01] 2026-03-14 20:13:21,824 | INFO     | 
[2026-03-14 21:14:01] 2026-03-14 20:13:21,824 | INFO     | job summary report
[2026-03-14 21:14:01] 2026-03-14 20:13:21,824 | INFO     | --------------------------------------------------
[2026-03-14 21:14:01] 2026-03-14 20:13:21,824 | INFO     | PanDA job id: 7044629805
[2026-03-14 21:14:01] 2026-03-14 20:13:21,824 | INFO     | task id: 48955010
[2026-03-14 21:14:01] 2026-03-14 20:13:21,824 | INFO     | errors: (none)
[2026-03-14 21:14:01] 2026-03-14 20:13:21,824 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 21:14:01] 2026-03-14 20:13:21,824 | INFO     | pilot state: finished 
[2026-03-14 21:14:01] 2026-03-14 20:13:21,824 | INFO     | transexitcode: 0
[2026-03-14 21:14:01] 2026-03-14 20:13:21,824 | INFO     | exeerrorcode: 0
[2026-03-14 21:14:01] 2026-03-14 20:13:21,824 | INFO     | exeerrordiag: 
[2026-03-14 21:14:01] 2026-03-14 20:13:21,824 | INFO     | exitcode: 0
[2026-03-14 21:14:01] 2026-03-14 20:13:21,824 | INFO     | exitmsg: OK
[2026-03-14 21:14:01] 2026-03-14 20:13:21,825 | INFO     | cpuconsumptiontime: 18326 s
[2026-03-14 21:14:01] 2026-03-14 20:13:21,825 | INFO     | nevents: 400
[2026-03-14 21:14:01] 2026-03-14 20:13:21,825 | INFO     | neventsw: 0
[2026-03-14 21:14:01] 2026-03-14 20:13:21,825 | INFO     | pid: 967519
[2026-03-14 21:14:01] 2026-03-14 20:13:21,825 | INFO     | pgrp: 967519
[2026-03-14 21:14:01] 2026-03-14 20:13:21,825 | INFO     | corecount: 4
[2026-03-14 21:14:01] 2026-03-14 20:13:21,825 | INFO     | event service: False
[2026-03-14 21:14:01] 2026-03-14 20:13:21,825 | INFO     | sizes: {0: 2279083, 1: 2280213, 11: 2280213, 4878: 2306523, 4879: 2315545, 4883: 2315601, 4884: 2315923}
[2026-03-14 21:14:01] 2026-03-14 20:13:21,825 | INFO     | --------------------------------------------------
[2026-03-14 21:14:01] 2026-03-14 20:13:21,825 | INFO     | 
[2026-03-14 21:14:01] 2026-03-14 20:13:21,825 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot104/slots/1
[2026-03-14 21:14:01] 2026-03-14 20:13:21,845 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 21:14:01] 2026-03-14 20:13:21,846 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 21:14:01] 2026-03-14 20:13:21,846 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 21:14:01] 2026-03-14 20:13:21,846 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 21:14:01] 2026-03-14 20:13:21,846 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 21:14:01] 2026-03-14 20:13:21,846 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 21:14:01] 2026-03-14 20:13:21,846 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 21:14:01] 2026-03-14 20:13:21,846 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 21:14:01] 2026-03-14 20:13:21,846 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 21:14:01] 2026-03-14 20:13:21,846 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 21:14:01] 2026-03-14 20:13:21,846 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 21:14:01] 2026-03-14 20:13:21,846 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 21:14:01] 2026-03-14 20:13:21,846 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 21:14:01] 2026-03-14 20:13:21,846 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 21:14:01] 2026-03-14 20:13:21,846 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 21:14:01] 2026-03-14 20:13:21,846 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 21:14:01] 2026-03-14 20:13:21,846 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 21:14:01] 2026-03-14 20:13:21,846 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 21:14:01] 2026-03-14 20:13:21,846 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 21:14:01] 2026-03-14 20:13:21,846 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 21:14:01] 2026-03-14 20:13:21,846 | INFO     | job 7044629805 has completed (purged errors)
[2026-03-14 21:14:01] 2026-03-14 20:13:21,846 | INFO     | overall cleanup function is called
[2026-03-14 21:14:01] 2026-03-14 20:13:22,794 | INFO     | PID=961598 has CPU usage=14.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 21:14:01] 2026-03-14 20:13:22,794 | INFO     | .. there are 50 such processes running
[2026-03-14 21:14:01] 2026-03-14 20:13:22,853 | INFO     | --- collectZombieJob: --- 10, [967519]
[2026-03-14 21:14:01] 2026-03-14 20:13:22,853 | INFO     | zombie collector waiting for pid 967519
[2026-03-14 21:14:01] 2026-03-14 20:13:22,853 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 21:14:01] 2026-03-14 20:13:22,853 | INFO     | collected zombie processes
[2026-03-14 21:14:01] 2026-03-14 20:13:22,853 | INFO     | will attempt to kill all subprocesses of pid=967519
[2026-03-14 21:14:01] 2026-03-14 20:13:23,373 | INFO     | process IDs to be killed: [967519] (in reverse order)
[2026-03-14 21:14:01] 2026-03-14 20:13:23,659 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 21:14:01] 2026-03-14 20:13:23,660 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 21:14:01] 2026-03-14 20:13:23,695 | INFO     | did not find any defunct processes belonging to 967519
[2026-03-14 21:14:01] 2026-03-14 20:13:23,725 | INFO     | did not find any defunct processes belonging to 967519
[2026-03-14 21:14:01] 2026-03-14 20:13:23,726 | INFO     | ready for new job
[2026-03-14 21:14:01] 2026-03-14 20:13:23,726 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 21:14:01] 2026-03-14 20:13:23,727 | INFO     | **************************************
[2026-03-14 21:14:01] 2026-03-14 20:13:23,727 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 21:14:01] 2026-03-14 20:13:23,727 | INFO     | **************************************
[2026-03-14 21:14:01] 2026-03-14 20:13:23,727 | INFO     | 
[2026-03-14 21:14:01] 2026-03-14 20:13:23,738 | INFO     | architecture information:
[2026-03-14 21:14:01] 2026-03-14 20:13:23,739 | INFO     | executing command: cat /etc/os-release
[2026-03-14 21:14:01] 2026-03-14 20:13:23,757 | INFO     | cat /etc/os-release:
[2026-03-14 21:14:01] NAME="CentOS Linux"
[2026-03-14 21:14:01] VERSION="7 (Core)"
[2026-03-14 21:14:01] ID="centos"
[2026-03-14 21:14:01] ID_LIKE="rhel fedora"
[2026-03-14 21:14:01] VERSION_ID="7"
[2026-03-14 21:14:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 21:14:01] ANSI_COLOR="0;31"
[2026-03-14 21:14:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 21:14:01] HOME_URL="https://www.centos.org/"
[2026-03-14 21:14:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 21:14:01] 
[2026-03-14 21:14:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 21:14:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 21:14:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 21:14:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 21:14:01] 
[2026-03-14 21:14:01] 2026-03-14 20:13:23,757 | INFO     | **************************************
[2026-03-14 21:14:01] 2026-03-14 20:13:24,259 | INFO     | executing command: df -mP /var/lib/boinc/var/slot104/slots/1
[2026-03-14 21:14:01] 2026-03-14 20:13:24,278 | INFO     | sufficient remaining disk space (20162019328 B)
[2026-03-14 21:14:01] 2026-03-14 20:13:24,278 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 21:14:01] 2026-03-14 20:13:24,278 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 21:14:01] 2026-03-14 20:13:24,278 | INFO     | update_server=False
[2026-03-14 21:14:01] 2026-03-14 20:13:24,279 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 21:14:01] 2026-03-14 20:13:24,279 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 21:14:01] 2026-03-14 20:13:24,279 | INFO     | aborting loop
[2026-03-14 21:14:01] 2026-03-14 20:13:24,683 | INFO     | all payload control threads have been joined
[2026-03-14 21:14:01] 2026-03-14 20:13:25,067 | INFO     | all data control threads have been joined
[2026-03-14 21:14:01] 2026-03-14 20:13:25,237 | INFO     | all job control threads have been joined
[2026-03-14 21:14:01] 2026-03-14 20:13:25,283 | INFO     | [job] retrieve thread has finished
[2026-03-14 21:14:01] 2026-03-14 20:13:25,284 | INFO     | [job] job monitor thread has finished
[2026-03-14 21:14:01] 2026-03-14 20:13:25,391 | INFO     | [data] copytool_in thread has finished
[2026-03-14 21:14:01] 2026-03-14 20:13:25,488 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 21:14:01] 2026-03-14 20:13:25,499 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 21:14:01] 2026-03-14 20:13:25,610 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 21:14:01] 2026-03-14 20:13:25,688 | INFO     | [payload] control thread has finished
[2026-03-14 21:14:01] 2026-03-14 20:13:25,744 | INFO     | [payload] validate_post thread has finished
[2026-03-14 21:14:01] 2026-03-14 20:13:25,885 | INFO     | [job] validate thread has finished
[2026-03-14 21:14:01] 2026-03-14 20:13:26,072 | INFO     | [data] control thread has finished
[2026-03-14 21:14:01] 2026-03-14 20:13:26,147 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 21:14:01] 2026-03-14 20:13:26,252 | INFO     | [job] control thread has finished
[2026-03-14 21:14:01] 2026-03-14 20:13:26,629 | INFO     | [payload] failed_post thread has finished
[2026-03-14 21:14:01] 2026-03-14 20:13:26,833 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 21:14:01] 2026-03-14 20:13:26,853 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 21:14:01] 2026-03-14 20:13:27,504 | INFO     | [data] copytool_out thread has finished
[2026-03-14 21:14:01] 2026-03-14 20:13:27,838 | INFO     | [job] queue monitor thread has finished
[2026-03-14 21:14:01] 2026-03-14 20:13:30,858 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 21:14:01] 2026-03-14 20:13:34,908 | INFO     | job.realtimelogging is not enabled
[2026-03-14 21:14:01] 2026-03-14 20:13:35,913 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 21:14:01] 2026-03-14 20:13:55,372 | INFO     | [monitor] cgroup control has ended
[2026-03-14 21:14:01] 2026-03-14 20:13:55,493 | INFO     | PID=961598 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-14 21:14:01] 2026-03-14 20:13:55,493 | INFO     | .. there are 50 such processes running
[2026-03-14 21:14:01] 2026-03-14 20:13:55,494 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 21:14:01] 2026-03-14 20:13:55,494 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 21:14:01] 2026-03-14 20:13:55,494 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 21:14:01] 2026-03-14 20:13:56,141 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22965876016960)>', '<ExcThread(monitor, started 22965638149888)>']
[2026-03-14 21:14:01] 2026-03-14 20:13:56,498 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 21:14:01] 2026-03-14 20:13:56,498 | INFO     | [monitor] control thread has ended
[2026-03-14 21:14:01] 2026-03-14 20:14:01,166 | INFO     | all workflow threads have been joined
[2026-03-14 21:14:01] 2026-03-14 20:14:01,166 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 21:14:01] 2026-03-14 20:14:01,166 | INFO     | traces error code: 0
[2026-03-14 21:14:01] 2026-03-14 20:14:01,167 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 21:14:01] 2026-03-14 20:14:01,420 [wrapper] ==== pilot stdout END ====
[2026-03-14 21:14:01] 2026-03-14 20:14:01,422 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 21:14:01] 2026-03-14 20:14:01,433 [wrapper] pilotpid: 961598
[2026-03-14 21:14:01] 2026-03-14 20:14:01,435 [wrapper] Pilot exit status: 0
[2026-03-14 21:14:01] 2026-03-14 20:14:01,458 [wrapper] pandaids: 7044629805
[2026-03-14 21:14:01] 2026-03-14 20:14:01,604 [wrapper] cleanup supervisor_pilot 1700270 961599
[2026-03-14 21:14:01] 2026-03-14 20:14:01,613 [wrapper] Test setup, not cleaning
[2026-03-14 21:14:01] 2026-03-14 20:14:01,628 [wrapper] apfmon messages muted
[2026-03-14 21:14:01] 2026-03-14 20:14:01,631 [wrapper] ==== wrapper stdout END ====
[2026-03-14 21:14:01] 2026-03-14 20:14:01,633 [wrapper] ==== wrapper stderr END ====
[2026-03-14 21:14:01]  *** Error codes and diagnostics ***
[2026-03-14 21:14:01]     "exeErrorCode": 0,
[2026-03-14 21:14:01]     "exeErrorDiag": "",
[2026-03-14 21:14:01]     "pilotErrorCode": 0,
[2026-03-14 21:14:01]     "pilotErrorDiag": "",
[2026-03-14 21:14:01]  *** Listing of results directory ***
[2026-03-14 21:14:01] total 617628
[2026-03-14 21:14:01] -rw-r--r--. 1 boinc boinc      5111 Mar 13 18:07 queuedata.json
[2026-03-14 21:14:01] -rw-r--r--. 1 boinc boinc    585013 Mar 13 18:07 pilot3.tar.gz
[2026-03-14 21:14:01] -rwx------. 1 boinc boinc     36322 Mar 13 18:07 runpilot2-wrapper.sh
[2026-03-14 21:14:01] -rw-r--r--. 1 boinc boinc       100 Mar 14 19:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 21:14:01] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 19:51 run_atlas
[2026-03-14 21:14:01] -rw-r--r--. 1 boinc boinc       105 Mar 14 19:51 job.xml
[2026-03-14 21:14:01] -rw-r--r--. 2 boinc boinc 441130583 Mar 14 19:51 EVNT.46701403._001638.pool.root.1
[2026-03-14 21:14:01] -rw-r--r--. 2 boinc boinc     15845 Mar 14 19:51 start_atlas.sh
[2026-03-14 21:14:01] drwxrwx--x. 2 boinc boinc      4096 Mar 14 19:51 shared
[2026-03-14 21:14:01] -rw-r--r--. 2 boinc boinc    597524 Mar 14 19:51 input.tar.gz
[2026-03-14 21:14:01] -rw-r--r--. 1 boinc boinc      6709 Mar 14 19:51 init_data.xml
[2026-03-14 21:14:01] -rw-r--r--. 1 boinc boinc         0 Mar 14 19:51 boinc_lockfile
[2026-03-14 21:14:01] -rw-r--r--. 1 boinc boinc      2560 Mar 14 19:51 pandaJob.out
[2026-03-14 21:14:01] -rw-------. 1 boinc boinc   1005889 Mar 14 19:51 agis_schedconf.cvmfs.json
[2026-03-14 21:14:01] -rw-------. 1 boinc boinc   1511579 Mar 14 19:51 agis_ddmendpoints.agis.ALL.json
[2026-03-14 21:14:01] -rw-------. 1 boinc boinc       445 Mar 14 19:51 workernode_map.json
[2026-03-14 21:14:01] drwx------. 5 boinc boinc      4096 Mar 14 19:51 pilot3
[2026-03-14 21:14:01] -rw-------. 1 boinc boinc 185450765 Mar 14 21:12 HITS.48955010._032162.pool.root.1
[2026-03-14 21:14:01] -rw-r--r--. 1 boinc boinc       530 Mar 14 21:12 boinc_task_state.xml
[2026-03-14 21:14:01] -rw-------. 1 boinc boinc        95 Mar 14 21:13 pilot_heartbeat.json
[2026-03-14 21:14:01] -rw-------. 1 boinc boinc      1029 Mar 14 21:13 memory_monitor_summary.json
[2026-03-14 21:14:01] -rw-------. 1 boinc boinc    253401 Mar 14 21:13 log.48955010._032162.job.log.tgz.1
[2026-03-14 21:14:01] -rw-------. 1 boinc boinc      6352 Mar 14 21:13 heartbeat.json
[2026-03-14 21:14:01] -rw-r--r--. 1 boinc boinc      8192 Mar 14 21:13 boinc_mmap_file
[2026-03-14 21:14:01] -rw-r--r--. 1 boinc boinc        27 Mar 14 21:13 wrapper_checkpoint.txt
[2026-03-14 21:14:01] -rw-------. 1 boinc boinc      4901 Mar 14 21:14 pilotlog.txt
[2026-03-14 21:14:01] -rw-------. 1 boinc boinc    713782 Mar 14 21:14 log.48955010._032162.job.log.1
[2026-03-14 21:14:01] -rw-------. 1 boinc boinc       357 Mar 14 21:14 output.list
[2026-03-14 21:14:01] -rw-r--r--. 1 boinc boinc       620 Mar 14 21:14 runtime_log
[2026-03-14 21:14:01] -rw-------. 1 boinc boinc    983040 Mar 14 21:14 result.tar.gz
[2026-03-14 21:14:01] -rw-r--r--. 1 boinc boinc      9221 Mar 14 21:14 runtime_log.err
[2026-03-14 21:14:01] -rw-------. 1 boinc boinc       663 Mar 14 21:14 PqYMDmMALL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmg9pLDmFIIJyn.diag
[2026-03-14 21:14:01] -rw-r--r--. 1 boinc boinc     21419 Mar 14 21:14 stderr.txt
[2026-03-14 21:14:01] HITS file was successfully produced:
[2026-03-14 21:14:01] -rw-------. 1 boinc boinc 185450765 Mar 14 21:12 shared/HITS.pool.root.1
[2026-03-14 21:14:01]  *** Contents of shared directory: ***
[2026-03-14 21:14:01] total 613468
[2026-03-14 21:14:01] -rw-r--r--. 2 boinc boinc 441130583 Mar 14 19:51 ATLAS.root_0
[2026-03-14 21:14:01] -rw-r--r--. 2 boinc boinc     15845 Mar 14 19:51 start_atlas.sh
[2026-03-14 21:14:01] -rw-r--r--. 2 boinc boinc    597524 Mar 14 19:51 input.tar.gz
[2026-03-14 21:14:01] -rw-------. 1 boinc boinc 185450765 Mar 14 21:12 HITS.pool.root.1
[2026-03-14 21:14:01] -rw-------. 1 boinc boinc    983040 Mar 14 21:14 result.tar.gz
21:14:02 (957060): run_atlas exited; CPU time 18543.751306
21:14:02 (957060): called boinc_finish(0)

</stderr_txt>
]]>

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