Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
13:28:24 (2976875): wrapper (7.7.26015): starting
13:28:24 (2976875): wrapper: running run_atlas (--nthreads 4)
[2026-03-13 13:28:24] Arguments: --nthreads 4
[2026-03-13 13:28:24] Threads: 4
[2026-03-13 13:28:24] Checking for CVMFS
[2026-03-13 13:28:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 13:28:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 13:28:26] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 13:28:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 13:28:26] 2.12.7.0 2483122 776 53028 157253 1 50 3392419 6144001 1846 130560 0 982992 99.994 31575 766 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-13 13:28:26] CVMFS is ok
[2026-03-13 13:28:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 13:28:26] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-13 13:28:26] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-13 13:28:26] Further information can be found at the LHC@home message board.
[2026-03-13 13:28:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 13:28:26] Checking for apptainer binary...
[2026-03-13 13:28:26] apptainer is not installed, using version from CVMFS
[2026-03-13 13:28:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 13:28:26] k8plus
[2026-03-13 13:28:26] apptainer works
[2026-03-13 13:28:26] Set ATHENA_PROC_NUMBER=4
[2026-03-13 13:28:26] Set ATHENA_CORE_NUMBER=4
[2026-03-13 13:28:26] Starting ATLAS job with PandaID=7044206891
[2026-03-13 13:28:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 14:55:21]  *** The last 200 lines of the pilot log: ***
[2026-03-13 14:55:21]  is_altstaged=None
[2026-03-13 14:55:21]  is_tar=False
[2026-03-13 14:55:21]  lfn=log.48955015._016224.job.log.tgz.1
[2026-03-13 14:55:21]  mtime=0
[2026-03-13 14:55:21]  protocol_id=None
[2026-03-13 14:55:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-13 14:55:21]  replicas=None
[2026-03-13 14:55:21]  scope=mc23_13p6TeV
[2026-03-13 14:55:21]  status=None
[2026-03-13 14:55:21]  status_code=0
[2026-03-13 14:55:21]  storage_token=
[2026-03-13 14:55:21]  surl=/var/lib/boinc-client/slots/3/PanDA_Pilot-7044206891/log.48955015._016224.job.log.tgz.1
[2026-03-13 14:55:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/5b/log.48955015._016224.job.log.tgz.1
[2026-03-13 14:55:21]  workdir=None
[2026-03-13 14:55:21] ]
[2026-03-13 14:55:21] 2026-03-13 21:54:43,277 | INFO     | transferring file log.48955015._016224.job.log.tgz.1 from /var/lib/boinc-client/slots/3/PanDA_Pilot-7044206891/log.48955015._016224.job.log.tgz.1 to /var/lib/boinc
[2026-03-13 14:55:21] 2026-03-13 21:54:43,277 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/3/PanDA_Pilot-7044206891/log.48955015._016224.job.log.tgz.1 /var/lib/boinc-client/slots/3/log.489550
[2026-03-13 14:55:21] 2026-03-13 21:54:43,288 | INFO     | adding to output.list: log.48955015._016224.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/5b/log.48955015._016224.job.log.tg
[2026-03-13 14:55:21] 2026-03-13 21:54:43,288 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-13 14:55:21] 2026-03-13 21:54:43,288 | INFO     | summary of transferred files:
[2026-03-13 14:55:21] 2026-03-13 21:54:43,288 | INFO     |  -- lfn=log.48955015._016224.job.log.tgz.1, status_code=0, status=transferred
[2026-03-13 14:55:21] 2026-03-13 21:54:43,289 | INFO     | stage-out finished correctly
[2026-03-13 14:55:21] 2026-03-13 21:54:43,796 | INFO     | time since job start (5159s) is within the limit (345600.0s)
[2026-03-13 14:55:21] 2026-03-13 21:54:45,643 | INFO     | monitor loop #394: job 0:7044206891 is in state 'finished'
[2026-03-13 14:55:21] 2026-03-13 21:54:45,643 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-13 14:55:21] 2026-03-13 21:54:45,801 | INFO     | time since job start (5161s) is within the limit (345600.0s)
[2026-03-13 14:55:21] 2026-03-13 21:54:46,272 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-13 14:55:21] 2026-03-13 21:54:47,806 | INFO     | time since job start (5163s) is within the limit (345600.0s)
[2026-03-13 14:55:21] 2026-03-13 21:54:48,146 | INFO     | monitor loop #395: job 0:7044206891 is in state 'finished'
[2026-03-13 14:55:21] 2026-03-13 21:54:48,146 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-13 14:55:21] 2026-03-13 21:54:49,301 | INFO     | job 7044206891 has state=finished
[2026-03-13 14:55:21] 2026-03-13 21:54:49,302 | INFO     | preparing for final server update for job 7044206891 in state='finished'
[2026-03-13 14:55:21] 2026-03-13 21:54:49,302 | INFO     | reading metadata from: /var/lib/boinc-client/slots/3/PanDA_Pilot-7044206891/jobReport.json
[2026-03-13 14:55:21] 2026-03-13 21:54:49,303 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/3/workernode_map.json
[2026-03-13 14:55:21] 2026-03-13 21:54:49,303 | INFO     | this job has now completed (state=finished)
[2026-03-13 14:55:21] 2026-03-13 21:54:49,303 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-13 14:55:21] 2026-03-13 21:54:49,303 | INFO     | log transfer has been attempted: DONE
[2026-03-13 14:55:21] 2026-03-13 21:54:49,303 | INFO     | job 7044206891 has finished - writing final server update
[2026-03-13 14:55:21] 2026-03-13 21:54:49,303 | INFO     | total number of processed events: 400 (read)
[2026-03-13 14:55:21] 2026-03-13 21:54:49,305 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-7044206891/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 14:55:21] 2026-03-13 21:54:49,306 | INFO     | extracted standard info from prmon json
[2026-03-13 14:55:21] 2026-03-13 21:54:49,306 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 14:55:21] 2026-03-13 21:54:49,306 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 14:55:21] 2026-03-13 21:54:49,306 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 14:55:21] 2026-03-13 21:54:49,306 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 14:55:21] 2026-03-13 21:54:49,307 | INFO     | fitting pss+swap vs Time
[2026-03-13 14:55:21] 2026-03-13 21:54:49,307 | INFO     | sum of square deviations: 147126479.5
[2026-03-13 14:55:21] 2026-03-13 21:54:49,307 | INFO     | sum of deviations: -8757756153.0
[2026-03-13 14:55:21] 2026-03-13 21:54:49,307 | INFO     | mean x: 1773436394.5
[2026-03-13 14:55:21] 2026-03-13 21:54:49,307 | INFO     | mean y: 2444835.9743589745
[2026-03-13 14:55:21] 2026-03-13 21:54:49,307 | INFO     | intersect: 105566878571.27971
[2026-03-13 14:55:21] 2026-03-13 21:54:49,307 | INFO     | chi2: 0.03827756087000995
[2026-03-13 14:55:21] 2026-03-13 21:54:49,308 | INFO     | current memory leak: -59.53 B/s (using 78 data points, chi2=0.04)
[2026-03-13 14:55:21] 2026-03-13 21:54:49,308 | INFO     | could have reported an average CPU frequency of 3926 MHz (6 samples)
[2026-03-13 14:55:21] 2026-03-13 21:54:49,308 | INFO     | ..............................
[2026-03-13 14:55:21] 2026-03-13 21:54:49,308 | INFO     | . Timing measurements:
[2026-03-13 14:55:21] 2026-03-13 21:54:49,308 | INFO     | . get job = 0 s
[2026-03-13 14:55:21] 2026-03-13 21:54:49,308 | INFO     | . initial setup = 7 s
[2026-03-13 14:55:21] 2026-03-13 21:54:49,308 | INFO     | . payload setup = 3 s
[2026-03-13 14:55:21] 2026-03-13 21:54:49,308 | INFO     | . stage-in = 0 s
[2026-03-13 14:55:21] 2026-03-13 21:54:49,308 | INFO     | . payload execution = 5140 s
[2026-03-13 14:55:21] 2026-03-13 21:54:49,308 | INFO     | . stage-out = 0 s
[2026-03-13 14:55:21] 2026-03-13 21:54:49,308 | INFO     | . log creation = 0 s
[2026-03-13 14:55:21] 2026-03-13 21:54:49,308 | INFO     | ..............................
[2026-03-13 14:55:21] 2026-03-13 21:54:49,356 | INFO     | 
[2026-03-13 14:55:21] 2026-03-13 21:54:49,356 | INFO     | job summary report
[2026-03-13 14:55:21] 2026-03-13 21:54:49,356 | INFO     | --------------------------------------------------
[2026-03-13 14:55:21] 2026-03-13 21:54:49,356 | INFO     | PanDA job id: 7044206891
[2026-03-13 14:55:21] 2026-03-13 21:54:49,356 | INFO     | task id: 48955015
[2026-03-13 14:55:21] 2026-03-13 21:54:49,356 | INFO     | errors: (none)
[2026-03-13 14:55:21] 2026-03-13 21:54:49,356 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 14:55:21] 2026-03-13 21:54:49,356 | INFO     | pilot state: finished 
[2026-03-13 14:55:21] 2026-03-13 21:54:49,356 | INFO     | transexitcode: 0
[2026-03-13 14:55:21] 2026-03-13 21:54:49,356 | INFO     | exeerrorcode: 0
[2026-03-13 14:55:21] 2026-03-13 21:54:49,356 | INFO     | exeerrordiag: 
[2026-03-13 14:55:21] 2026-03-13 21:54:49,356 | INFO     | exitcode: 0
[2026-03-13 14:55:21] 2026-03-13 21:54:49,356 | INFO     | exitmsg: OK
[2026-03-13 14:55:21] 2026-03-13 21:54:49,356 | INFO     | cpuconsumptiontime: 19610 s
[2026-03-13 14:55:21] 2026-03-13 21:54:49,356 | INFO     | nevents: 400
[2026-03-13 14:55:21] 2026-03-13 21:54:49,356 | INFO     | neventsw: 0
[2026-03-13 14:55:21] 2026-03-13 21:54:49,356 | INFO     | pid: 2985617
[2026-03-13 14:55:21] 2026-03-13 21:54:49,356 | INFO     | pgrp: 2985617
[2026-03-13 14:55:21] 2026-03-13 21:54:49,356 | INFO     | corecount: 4
[2026-03-13 14:55:21] 2026-03-13 21:54:49,356 | INFO     | event service: False
[2026-03-13 14:55:21] 2026-03-13 21:54:49,356 | INFO     | sizes: {0: 2280243, 11: 2280243, 5147: 2306734, 5148: 2315801, 5151: 2315801, 5154: 2315995}
[2026-03-13 14:55:21] 2026-03-13 21:54:49,356 | INFO     | --------------------------------------------------
[2026-03-13 14:55:21] 2026-03-13 21:54:49,356 | INFO     | 
[2026-03-13 14:55:21] 2026-03-13 21:54:49,356 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2026-03-13 14:55:21] 2026-03-13 21:54:49,369 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 14:55:21] 2026-03-13 21:54:49,369 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 14:55:21] 2026-03-13 21:54:49,369 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 14:55:21] 2026-03-13 21:54:49,369 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 14:55:21] 2026-03-13 21:54:49,369 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 14:55:21] 2026-03-13 21:54:49,370 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 14:55:21] 2026-03-13 21:54:49,370 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 14:55:21] 2026-03-13 21:54:49,370 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 14:55:21] 2026-03-13 21:54:49,370 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 14:55:21] 2026-03-13 21:54:49,370 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 14:55:21] 2026-03-13 21:54:49,370 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 14:55:21] 2026-03-13 21:54:49,370 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 14:55:21] 2026-03-13 21:54:49,370 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 14:55:21] 2026-03-13 21:54:49,370 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 14:55:21] 2026-03-13 21:54:49,370 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 14:55:21] 2026-03-13 21:54:49,370 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 14:55:21] 2026-03-13 21:54:49,370 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 14:55:21] 2026-03-13 21:54:49,370 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 14:55:21] 2026-03-13 21:54:49,370 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 14:55:21] 2026-03-13 21:54:49,370 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 14:55:21] 2026-03-13 21:54:49,370 | INFO     | job 7044206891 has completed (purged errors)
[2026-03-13 14:55:21] 2026-03-13 21:54:49,370 | INFO     | overall cleanup function is called
[2026-03-13 14:55:21] 2026-03-13 21:54:50,377 | INFO     | --- collectZombieJob: --- 10, [2985617]
[2026-03-13 14:55:21] 2026-03-13 21:54:50,377 | INFO     | zombie collector waiting for pid 2985617
[2026-03-13 14:55:21] 2026-03-13 21:54:50,377 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 14:55:21] 2026-03-13 21:54:50,377 | INFO     | collected zombie processes
[2026-03-13 14:55:21] 2026-03-13 21:54:50,377 | INFO     | will attempt to kill all subprocesses of pid=2985617
[2026-03-13 14:55:21] 2026-03-13 21:54:50,458 | INFO     | process IDs to be killed: [2985617] (in reverse order)
[2026-03-13 14:55:21] 2026-03-13 21:54:50,494 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 14:55:21] 2026-03-13 21:54:50,494 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 14:55:21] 2026-03-13 21:54:50,497 | INFO     | did not find any defunct processes belonging to 2985617
[2026-03-13 14:55:21] 2026-03-13 21:54:50,500 | INFO     | did not find any defunct processes belonging to 2985617
[2026-03-13 14:55:21] 2026-03-13 21:54:50,500 | INFO     | ready for new job
[2026-03-13 14:55:21] 2026-03-13 21:54:50,500 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 14:55:21] 2026-03-13 21:54:50,501 | INFO     | **************************************
[2026-03-13 14:55:21] 2026-03-13 21:54:50,501 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 14:55:21] 2026-03-13 21:54:50,501 | INFO     | **************************************
[2026-03-13 14:55:21] 2026-03-13 21:54:50,501 | INFO     | 
[2026-03-13 14:55:21] 2026-03-13 21:54:50,502 | INFO     | architecture information:
[2026-03-13 14:55:21] 2026-03-13 21:54:50,502 | INFO     | executing command: cat /etc/os-release
[2026-03-13 14:55:21] 2026-03-13 21:54:50,511 | INFO     | cat /etc/os-release:
[2026-03-13 14:55:21] NAME="CentOS Linux"
[2026-03-13 14:55:21] VERSION="7 (Core)"
[2026-03-13 14:55:21] ID="centos"
[2026-03-13 14:55:21] ID_LIKE="rhel fedora"
[2026-03-13 14:55:21] VERSION_ID="7"
[2026-03-13 14:55:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 14:55:21] ANSI_COLOR="0;31"
[2026-03-13 14:55:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 14:55:21] HOME_URL="https://www.centos.org/"
[2026-03-13 14:55:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 14:55:21] 
[2026-03-13 14:55:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 14:55:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 14:55:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 14:55:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 14:55:21] 
[2026-03-13 14:55:21] 2026-03-13 21:54:50,511 | INFO     | **************************************
[2026-03-13 14:55:21] 2026-03-13 21:54:51,013 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2026-03-13 14:55:21] 2026-03-13 21:54:51,024 | INFO     | sufficient remaining disk space (99660857344 B)
[2026-03-13 14:55:21] 2026-03-13 21:54:51,024 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 14:55:21] 2026-03-13 21:54:51,024 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 14:55:21] 2026-03-13 21:54:51,024 | INFO     | update_server=False
[2026-03-13 14:55:21] 2026-03-13 21:54:51,024 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 14:55:21] 2026-03-13 21:54:51,024 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 14:55:21] 2026-03-13 21:54:51,322 | INFO     | all job control threads have been joined
[2026-03-13 14:55:21] 2026-03-13 21:54:51,349 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 14:55:21] 2026-03-13 21:54:51,650 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 14:55:21] 2026-03-13 21:54:51,650 | INFO     | aborting loop
[2026-03-13 14:55:21] 2026-03-13 21:54:51,881 | INFO     | all data control threads have been joined
[2026-03-13 14:55:21] 2026-03-13 21:54:52,026 | INFO     | [job] retrieve thread has finished
[2026-03-13 14:55:21] 2026-03-13 21:54:52,026 | INFO     | [job] queue monitor thread has finished
[2026-03-13 14:55:21] 2026-03-13 21:54:52,081 | INFO     | [monitor] cgroup control has ended
[2026-03-13 14:55:21] 2026-03-13 21:54:52,177 | INFO     | all payload control threads have been joined
[2026-03-13 14:55:21] 2026-03-13 21:54:52,325 | INFO     | [job] control thread has finished
[2026-03-13 14:55:21] 2026-03-13 21:54:52,325 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 14:55:21] 2026-03-13 21:54:52,550 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 14:55:21] 2026-03-13 21:54:52,651 | INFO     | [job] job monitor thread has finished
[2026-03-13 14:55:21] 2026-03-13 21:54:52,700 | INFO     | [job] validate thread has finished
[2026-03-13 14:55:21] 2026-03-13 21:54:52,886 | INFO     | [data] control thread has finished
[2026-03-13 14:55:21] 2026-03-13 21:54:52,888 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 14:55:21] 2026-03-13 21:54:53,009 | INFO     | [payload] failed_post thread has finished
[2026-03-13 14:55:21] 2026-03-13 21:54:53,025 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 14:55:21] 2026-03-13 21:54:53,131 | INFO     | [data] copytool_in thread has finished
[2026-03-13 14:55:21] 2026-03-13 21:54:53,182 | INFO     | [payload] control thread has finished
[2026-03-13 14:55:21] 2026-03-13 21:54:53,354 | INFO     | [data] copytool_out thread has finished
[2026-03-13 14:55:21] 2026-03-13 21:54:53,507 | INFO     | [payload] validate_post thread has finished
[2026-03-13 14:55:21] 2026-03-13 21:54:56,331 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 14:55:21] 2026-03-13 21:55:01,688 | INFO     | job.realtimelogging is not enabled
[2026-03-13 14:55:21] 2026-03-13 21:55:02,694 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 14:55:21] 2026-03-13 21:55:04,401 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129289065408320)>', '<ExcThread(monitor, started 129288305108736)>']
[2026-03-13 14:55:21] 2026-03-13 21:55:09,416 | INFO     | all workflow threads have been joined
[2026-03-13 14:55:21] 2026-03-13 21:55:09,416 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 14:55:21] 2026-03-13 21:55:09,417 | INFO     | traces error code: 0
[2026-03-13 14:55:21] 2026-03-13 21:55:09,417 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 14:55:21] 2026-03-13 21:55:20,968 | INFO     | PID=2981061 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-13 14:55:21] 2026-03-13 21:55:20,968 | INFO     | .. there are 4 such processes running
[2026-03-13 14:55:21] 2026-03-13 21:55:20,969 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 14:55:21] 2026-03-13 21:55:20,969 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 14:55:21] 2026-03-13 21:55:20,969 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 14:55:21] 2026-03-13 21:55:20,969 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 14:55:21] 2026-03-13 21:55:20,969 | INFO     | [monitor] control thread has ended
[2026-03-13 14:55:21] 2026-03-13 21:55:21,040 [wrapper] ==== pilot stdout END ====
[2026-03-13 14:55:21] 2026-03-13 21:55:21,042 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 14:55:21] 2026-03-13 21:55:21,043 [wrapper] pilotpid: 2981061
[2026-03-13 14:55:21] 2026-03-13 21:55:21,045 [wrapper] Pilot exit status: 0
[2026-03-13 14:55:21] 2026-03-13 21:55:21,050 [wrapper] pandaids: 7044206891
[2026-03-13 14:55:21] 2026-03-13 21:55:21,073 [wrapper] cleanup supervisor_pilot 3045576 2981062
[2026-03-13 14:55:21] 2026-03-13 21:55:21,075 [wrapper] Test setup, not cleaning
[2026-03-13 14:55:21] 2026-03-13 21:55:21,076 [wrapper] apfmon messages muted
[2026-03-13 14:55:21] 2026-03-13 21:55:21,078 [wrapper] ==== wrapper stdout END ====
[2026-03-13 14:55:21] 2026-03-13 21:55:21,079 [wrapper] ==== wrapper stderr END ====
[2026-03-13 14:55:21]  *** Error codes and diagnostics ***
[2026-03-13 14:55:21]     "exeErrorCode": 0,
[2026-03-13 14:55:21]     "exeErrorDiag": "",
[2026-03-13 14:55:21]     "pilotErrorCode": 0,
[2026-03-13 14:55:21]     "pilotErrorDiag": "",
[2026-03-13 14:55:21]  *** Listing of results directory ***
[2026-03-13 14:55:21] total 613008
[2026-03-13 14:55:21] -rw-r--r-- 1 boinc boinc    585013 Mar 13 06:59 pilot3.tar.gz
[2026-03-13 14:55:21] -rwx------ 1 boinc boinc     36322 Mar 13 07:01 runpilot2-wrapper.sh
[2026-03-13 14:55:21] -rw-r--r-- 1 boinc boinc      5111 Mar 13 07:02 queuedata.json
[2026-03-13 14:55:21] -rw-r--r-- 1 boinc boinc       100 Mar 13 13:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 14:55:21] -rwxr-xr-x 1 boinc boinc      7986 Mar 13 13:28 run_atlas
[2026-03-13 14:55:21] -rw-r--r-- 1 boinc boinc       105 Mar 13 13:28 job.xml
[2026-03-13 14:55:21] -rw-r--r-- 2 boinc boinc 440227372 Mar 13 13:28 EVNT.46701403._002379.pool.root.1
[2026-03-13 14:55:21] -rw-r--r-- 2 boinc boinc    597537 Mar 13 13:28 input.tar.gz
[2026-03-13 14:55:21] drwxrwx--x 2 boinc boinc      4096 Mar 13 13:28 shared
[2026-03-13 14:55:21] -rw-r--r-- 1 boinc boinc         0 Mar 13 13:28 boinc_setup_complete
[2026-03-13 14:55:21] -rw-r--r-- 2 boinc boinc     15845 Mar 13 13:28 start_atlas.sh
[2026-03-13 14:55:21] -rw-r--r-- 1 boinc boinc      7296 Mar 13 13:28 init_data.xml
[2026-03-13 14:55:21] -rw-r--r-- 1 boinc boinc         0 Mar 13 13:28 boinc_lockfile
[2026-03-13 14:55:21] -rw-r--r-- 1 boinc boinc      2571 Mar 13 13:28 pandaJob.out
[2026-03-13 14:55:21] -rw------- 1 boinc boinc   1006721 Mar 13 13:28 agis_schedconf.cvmfs.json
[2026-03-13 14:55:21] -rw------- 1 boinc boinc   1511579 Mar 13 13:28 agis_ddmendpoints.agis.ALL.json
[2026-03-13 14:55:21] -rw------- 1 boinc boinc       420 Mar 13 13:28 workernode_map.json
[2026-03-13 14:55:21] drwx------ 5 boinc boinc      4096 Mar 13 13:28 pilot3
[2026-03-13 14:55:21] -rw------- 1 boinc boinc 181437093 Mar 13 14:54 HITS.48955015._016224.pool.root.1
[2026-03-13 14:55:21] -rw------- 1 boinc boinc        95 Mar 13 14:54 pilot_heartbeat.json
[2026-03-13 14:55:21] -rw------- 1 boinc boinc      1029 Mar 13 14:54 memory_monitor_summary.json
[2026-03-13 14:55:21] -rw------- 1 boinc boinc    288069 Mar 13 14:54 log.48955015._016224.job.log.tgz.1
[2026-03-13 14:55:21] -rw-r--r-- 1 boinc boinc       530 Mar 13 14:54 boinc_task_state.xml
[2026-03-13 14:55:21] -rw------- 1 boinc boinc      6326 Mar 13 14:54 heartbeat.json
[2026-03-13 14:55:21] -rw-r--r-- 1 boinc boinc      8192 Mar 13 14:55 boinc_mmap_file
[2026-03-13 14:55:21] -rw-r--r-- 1 boinc boinc        27 Mar 13 14:55 wrapper_checkpoint.txt
[2026-03-13 14:55:21] -rw------- 1 boinc boinc       822 Mar 13 14:55 pilotlog.txt
[2026-03-13 14:55:21] -rw------- 1 boinc boinc    772171 Mar 13 14:55 log.48955015._016224.job.log.1
[2026-03-13 14:55:21] -rw------- 1 boinc boinc       357 Mar 13 14:55 output.list
[2026-03-13 14:55:21] -rw-r--r-- 1 boinc boinc       620 Mar 13 14:55 runtime_log
[2026-03-13 14:55:21] -rw------- 1 boinc boinc   1075200 Mar 13 14:55 result.tar.gz
[2026-03-13 14:55:21] -rw-r--r-- 1 boinc boinc      8907 Mar 13 14:55 runtime_log.err
[2026-03-13 14:55:21] -rw------- 1 boinc boinc       648 Mar 13 14:55 WdeKDm0FIL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmECnLDm2hNhvm.diag
[2026-03-13 14:55:21] -rw-r--r-- 1 boinc boinc     21583 Mar 13 14:55 stderr.txt
[2026-03-13 14:55:21] HITS file was successfully produced:
[2026-03-13 14:55:21] -rw------- 1 boinc boinc 181437093 Mar 13 14:54 shared/HITS.pool.root.1
[2026-03-13 14:55:21]  *** Contents of shared directory: ***
[2026-03-13 14:55:21] total 608760
[2026-03-13 14:55:21] -rw-r--r-- 2 boinc boinc 440227372 Mar 13 13:28 ATLAS.root_0
[2026-03-13 14:55:21] -rw-r--r-- 2 boinc boinc    597537 Mar 13 13:28 input.tar.gz
[2026-03-13 14:55:21] -rw-r--r-- 2 boinc boinc     15845 Mar 13 13:28 start_atlas.sh
[2026-03-13 14:55:21] -rw------- 1 boinc boinc 181437093 Mar 13 14:54 HITS.pool.root.1
[2026-03-13 14:55:21] -rw------- 1 boinc boinc   1075200 Mar 13 14:55 result.tar.gz
14:55:22 (2976875): run_atlas exited; CPU time 19653.679524
14:55:22 (2976875): called boinc_finish(0)

</stderr_txt>
]]>

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