Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:09 (1284620): wrapper (7.7.26015): starting
00:02:09 (1284620): wrapper: running run_atlas (--nthreads 8)
[2026-03-14 00:02:09] Arguments: --nthreads 8
[2026-03-14 00:02:09] Threads: 8
[2026-03-14 00:02:09] Checking for CVMFS
[2026-03-14 00:02:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 00:02:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 00:02:11] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 00:02:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 00:02:12] 2.13.3.0 8454 114178 278316 157263 1 291 21438573 39288833 9707 16776704 0 55453783 99.663 62304564 32792 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-14 00:02:12] CVMFS is ok
[2026-03-14 00:02:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 00:02:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 00:02:12] Further information can be found at the LHC@home message board.
[2026-03-14 00:02:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 00:02:12] Checking for apptainer binary...
[2026-03-14 00:02:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 00:02:12] Running /usr/bin/apptainer --version
[2026-03-14 00:02:12] apptainer version 1.4.5-2.el9
[2026-03-14 00:02:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 00:02:13] c-211-31.aglt2.org
[2026-03-14 00:02:13] apptainer works
[2026-03-14 00:02:13] Set ATHENA_PROC_NUMBER=8
[2026-03-14 00:02:13] Set ATHENA_CORE_NUMBER=8
[2026-03-14 00:02:13] Starting ATLAS job with PandaID=7044615024
[2026-03-14 00:02:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 13:45:09]  *** The last 200 lines of the pilot log: ***
[2026-03-14 13:45:09] 2026-03-14 17:44:32,125 | INFO     | sum of deviations: 737529641708.2449
[2026-03-14 13:45:09] 2026-03-14 17:44:32,125 | INFO     | mean x: 1773485606.1739674
[2026-03-14 13:45:09] 2026-03-14 17:44:32,125 | INFO     | mean y: 2483678.3291614517
[2026-03-14 13:45:09] 2026-03-14 17:44:32,125 | INFO     | intersect: -8267510661.83492
[2026-03-14 13:45:09] 2026-03-14 17:44:32,174 | INFO     | chi2: 6.673578137949779
[2026-03-14 13:45:09] 2026-03-14 17:44:32,175 | INFO     | current chi2=6.673578137949779 (change=9.198313003820207 %)
[2026-03-14 13:45:09] 2026-03-14 17:44:32,175 | INFO     | right removable region: 798
[2026-03-14 13:45:09] 2026-03-14 17:44:32,176 | INFO     | sum of square deviations: 158161496083.46954
[2026-03-14 13:45:09] 2026-03-14 17:44:32,266 | INFO     | sum of deviations: 426820310294.1685
[2026-03-14 13:45:09] 2026-03-14 17:44:32,266 | INFO     | mean x: 1773485911.175219
[2026-03-14 13:45:09] 2026-03-14 17:44:32,266 | INFO     | mean y: 2495043.4630788486
[2026-03-14 13:45:09] 2026-03-14 17:44:32,271 | INFO     | intersect: -4783497917.242469
[2026-03-14 13:45:09] 2026-03-14 17:44:32,272 | INFO     | chi2: 3.324959654844039
[2026-03-14 13:45:09] 2026-03-14 17:44:32,272 | INFO     | current chi2=3.324959654844039 (change=54.76010925275144 %)
[2026-03-14 13:45:09] 2026-03-14 17:44:32,274 | INFO     | sum of square deviations: 155210635017.815
[2026-03-14 13:45:09] 2026-03-14 17:44:32,348 | INFO     | sum of deviations: 242809646979.7116
[2026-03-14 13:45:09] 2026-03-14 17:44:32,348 | INFO     | mean x: 1773486063.6763225
[2026-03-14 13:45:09] 2026-03-14 17:44:32,348 | INFO     | mean y: 2504549.298488665
[2026-03-14 13:45:09] 2026-03-14 17:44:32,348 | INFO     | intersect: -2771915676.449959
[2026-03-14 13:45:09] 2026-03-14 17:44:32,350 | INFO     | chi2: 1.4759241851393874
[2026-03-14 13:45:09] 2026-03-14 17:44:32,350 | INFO     | current chi2=1.4759241851393874 (change=55.61076408884675 %)
[2026-03-14 13:45:09] 2026-03-14 17:44:32,355 | INFO     | sum of square deviations: 152296608252.44394
[2026-03-14 13:45:09] 2026-03-14 17:44:32,394 | INFO     | sum of deviations: 153775922788.9239
[2026-03-14 13:45:09] 2026-03-14 17:44:32,395 | INFO     | mean x: 1773486216.1799746
[2026-03-14 13:45:09] 2026-03-14 17:44:32,395 | INFO     | mean y: 2509209.197718631
[2026-03-14 13:45:09] 2026-03-14 17:44:32,395 | INFO     | intersect: -1788203549.1222696
[2026-03-14 13:45:09] 2026-03-14 17:44:32,400 | INFO     | chi2: 1.0547912861633768
[2026-03-14 13:45:09] 2026-03-14 17:44:32,401 | INFO     | current chi2=1.0547912861633768 (change=28.53350485182533 %)
[2026-03-14 13:45:09] 2026-03-14 17:44:32,402 | INFO     | sum of square deviations: 149419183712.8109
[2026-03-14 13:45:09] 2026-03-14 17:44:32,522 | INFO     | sum of deviations: 82859787071.21436
[2026-03-14 13:45:09] 2026-03-14 17:44:32,523 | INFO     | mean x: 1773486368.6862245
[2026-03-14 13:45:09] 2026-03-14 17:44:32,523 | INFO     | mean y: 2512966.464285714
[2026-03-14 13:45:09] 2026-03-14 17:44:32,523 | INFO     | intersect: -980966525.4695365
[2026-03-14 13:45:09] 2026-03-14 17:44:32,524 | INFO     | chi2: 0.7895873585935337
[2026-03-14 13:45:09] 2026-03-14 17:44:32,524 | INFO     | current chi2=0.7895873585935337 (change=25.14278711331387 %)
[2026-03-14 13:45:09] 2026-03-14 17:44:32,525 | INFO     | sum of square deviations: 146578272676.50085
[2026-03-14 13:45:09] 2026-03-14 17:44:32,580 | INFO     | sum of deviations: 46598472819.59827
[2026-03-14 13:45:09] 2026-03-14 17:44:32,581 | INFO     | mean x: 1773486521.1912708
[2026-03-14 13:45:09] 2026-03-14 17:44:32,581 | INFO     | mean y: 2514913.2644415917
[2026-03-14 13:45:09] 2026-03-14 17:44:32,581 | INFO     | intersect: -561291454.1092973
[2026-03-14 13:45:09] 2026-03-14 17:44:32,582 | INFO     | chi2: 0.7220087876037335
[2026-03-14 13:45:09] 2026-03-14 17:44:32,582 | INFO     | current chi2=0.7220087876037335 (change=8.558719976238685 %)
[2026-03-14 13:45:09] 2026-03-14 17:44:32,587 | INFO     | left removable region: 50
[2026-03-14 13:45:09] 2026-03-14 17:44:32,588 | INFO     | sum of square deviations: 129765249030.04677
[2026-03-14 13:45:09] 2026-03-14 17:44:32,654 | INFO     | sum of deviations: 82413063171.59758
[2026-03-14 13:45:09] 2026-03-14 17:44:32,655 | INFO     | mean x: 1773487100.709893
[2026-03-14 13:45:09] 2026-03-14 17:44:32,655 | INFO     | mean y: 2517996.0949197863
[2026-03-14 13:45:09] 2026-03-14 17:44:32,655 | INFO     | intersect: -1123812092.7178044
[2026-03-14 13:45:09] 2026-03-14 17:44:32,656 | INFO     | chi2: 0.006761743154332604
[2026-03-14 13:45:09] 2026-03-14 17:44:32,656 | INFO     | current memory leak: 0.64 B/s (using 748 data points, chi2=0.01)
[2026-03-14 13:45:09] 2026-03-14 17:44:32,662 | INFO     | could have reported an average CPU frequency of 2899 MHz (31 samples)
[2026-03-14 13:45:09] 2026-03-14 17:44:32,662 | INFO     | ..............................
[2026-03-14 13:45:09] 2026-03-14 17:44:32,662 | INFO     | . Timing measurements:
[2026-03-14 13:45:09] 2026-03-14 17:44:32,662 | INFO     | . get job = 0 s
[2026-03-14 13:45:09] 2026-03-14 17:44:32,662 | INFO     | . initial setup = 62 s
[2026-03-14 13:45:09] 2026-03-14 17:44:32,663 | INFO     | . payload setup = 88 s
[2026-03-14 13:45:09] 2026-03-14 17:44:32,663 | INFO     | . stage-in = 2 s
[2026-03-14 13:45:09] 2026-03-14 17:44:32,663 | INFO     | . payload execution = 49031 s
[2026-03-14 13:45:09] 2026-03-14 17:44:32,663 | INFO     | . stage-out = 8 s
[2026-03-14 13:45:09] 2026-03-14 17:44:32,663 | INFO     | . log creation = 1 s
[2026-03-14 13:45:09] 2026-03-14 17:44:32,663 | INFO     | ..............................
[2026-03-14 13:45:09] 2026-03-14 17:44:32,674 | INFO     | monitor loop #2798: job 0:7044615024 is in state 'finished'
[2026-03-14 13:45:09] 2026-03-14 17:44:32,674 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-14 13:45:09] 2026-03-14 17:44:33,863 | INFO     | PID=1292385 has CPU usage=12.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-14 13:45:09] 2026-03-14 17:44:33,863 | INFO     | .. there are 7 such processes running
[2026-03-14 13:45:09] 2026-03-14 17:44:34,144 | INFO     | 
[2026-03-14 13:45:09] 2026-03-14 17:44:34,144 | INFO     | job summary report
[2026-03-14 13:45:09] 2026-03-14 17:44:34,144 | INFO     | --------------------------------------------------
[2026-03-14 13:45:09] 2026-03-14 17:44:34,144 | INFO     | PanDA job id: 7044615024
[2026-03-14 13:45:09] 2026-03-14 17:44:34,144 | INFO     | task id: 48955015
[2026-03-14 13:45:09] 2026-03-14 17:44:34,145 | INFO     | errors: (none)
[2026-03-14 13:45:09] 2026-03-14 17:44:34,145 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 13:45:09] 2026-03-14 17:44:34,145 | INFO     | pilot state: finished 
[2026-03-14 13:45:09] 2026-03-14 17:44:34,145 | INFO     | transexitcode: 0
[2026-03-14 13:45:09] 2026-03-14 17:44:34,145 | INFO     | exeerrorcode: 0
[2026-03-14 13:45:09] 2026-03-14 17:44:34,145 | INFO     | exeerrordiag: 
[2026-03-14 13:45:09] 2026-03-14 17:44:34,146 | INFO     | exitcode: 0
[2026-03-14 13:45:09] 2026-03-14 17:44:34,146 | INFO     | exitmsg: OK
[2026-03-14 13:45:09] 2026-03-14 17:44:34,146 | INFO     | cpuconsumptiontime: 72451 s
[2026-03-14 13:45:09] 2026-03-14 17:44:34,146 | INFO     | nevents: 400
[2026-03-14 13:45:09] 2026-03-14 17:44:34,146 | INFO     | neventsw: 0
[2026-03-14 13:45:09] 2026-03-14 17:44:34,146 | INFO     | pid: 1306104
[2026-03-14 13:45:09] 2026-03-14 17:44:34,147 | INFO     | pgrp: 1306104
[2026-03-14 13:45:09] 2026-03-14 17:44:34,147 | INFO     | corecount: 8
[2026-03-14 13:45:09] 2026-03-14 17:44:34,147 | INFO     | event service: False
[2026-03-14 13:45:09] 2026-03-14 17:44:34,147 | INFO     | sizes: {0: 2279148, 1: 2279749, 2: 2279861, 3: 2279861, 5: 2279861, 7: 2280506, 18: 2280506, 49124: 2326564, 49125: 2326563, 49136: 2335617, 49140: 2335673, 49142:
[2026-03-14 13:45:09] 2026-03-14 17:44:34,147 | INFO     | --------------------------------------------------
[2026-03-14 13:45:09] 2026-03-14 17:44:34,147 | INFO     | 
[2026-03-14 13:45:09] 2026-03-14 17:44:34,167 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-03-14 13:45:09] 2026-03-14 17:44:34,310 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 13:45:09] 2026-03-14 17:44:34,310 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 13:45:09] 2026-03-14 17:44:34,311 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 13:45:09] 2026-03-14 17:44:34,311 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 13:45:09] 2026-03-14 17:44:34,311 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 13:45:09] 2026-03-14 17:44:34,311 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 13:45:09] 2026-03-14 17:44:34,311 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 13:45:09] 2026-03-14 17:44:34,312 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 13:45:09] 2026-03-14 17:44:34,312 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 13:45:09] 2026-03-14 17:44:34,312 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 13:45:09] 2026-03-14 17:44:34,312 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 13:45:09] 2026-03-14 17:44:34,312 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 13:45:09] 2026-03-14 17:44:34,312 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 13:45:09] 2026-03-14 17:44:34,313 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 13:45:09] 2026-03-14 17:44:34,313 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 13:45:09] 2026-03-14 17:44:34,313 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 13:45:09] 2026-03-14 17:44:34,313 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 13:45:09] 2026-03-14 17:44:34,313 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 13:45:09] 2026-03-14 17:44:34,313 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 13:45:09] 2026-03-14 17:44:34,334 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 13:45:09] 2026-03-14 17:44:34,334 | INFO     | job 7044615024 has completed (purged errors)
[2026-03-14 13:45:09] 2026-03-14 17:44:34,335 | INFO     | overall cleanup function is called
[2026-03-14 13:45:09] 2026-03-14 17:44:35,377 | INFO     | --- collectZombieJob: --- 10, [1306104]
[2026-03-14 13:45:09] 2026-03-14 17:44:35,377 | INFO     | zombie collector waiting for pid 1306104
[2026-03-14 13:45:09] 2026-03-14 17:44:35,377 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 13:45:09] 2026-03-14 17:44:35,377 | INFO     | collected zombie processes
[2026-03-14 13:45:09] 2026-03-14 17:44:35,378 | INFO     | will attempt to kill all subprocesses of pid=1306104
[2026-03-14 13:45:09] 2026-03-14 17:44:36,640 | INFO     | process IDs to be killed: [1306104] (in reverse order)
[2026-03-14 13:45:09] 2026-03-14 17:44:37,308 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 13:45:09] 2026-03-14 17:44:37,309 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 13:45:09] 2026-03-14 17:44:37,369 | INFO     | did not find any defunct processes belonging to 1306104
[2026-03-14 13:45:09] 2026-03-14 17:44:37,415 | INFO     | did not find any defunct processes belonging to 1306104
[2026-03-14 13:45:09] 2026-03-14 17:44:37,416 | INFO     | ready for new job
[2026-03-14 13:45:09] 2026-03-14 17:44:37,416 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 13:45:09] 2026-03-14 17:44:37,461 | INFO     | **************************************
[2026-03-14 13:45:09] 2026-03-14 17:44:37,478 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 13:45:09] 2026-03-14 17:44:37,478 | INFO     | **************************************
[2026-03-14 13:45:09] 2026-03-14 17:44:37,479 | INFO     | 
[2026-03-14 13:45:09] 2026-03-14 17:44:37,481 | INFO     | architecture information:
[2026-03-14 13:45:09] 2026-03-14 17:44:37,483 | INFO     | executing command: cat /etc/os-release
[2026-03-14 13:45:09] 2026-03-14 17:44:37,598 | INFO     | cat /etc/os-release:
[2026-03-14 13:45:09] NAME="CentOS Linux"
[2026-03-14 13:45:09] VERSION="7 (Core)"
[2026-03-14 13:45:09] ID="centos"
[2026-03-14 13:45:09] ID_LIKE="rhel fedora"
[2026-03-14 13:45:09] VERSION_ID="7"
[2026-03-14 13:45:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 13:45:09] ANSI_COLOR="0;31"
[2026-03-14 13:45:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 13:45:09] HOME_URL="https://www.centos.org/"
[2026-03-14 13:45:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 13:45:09] 
[2026-03-14 13:45:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 13:45:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 13:45:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 13:45:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 13:45:09] 
[2026-03-14 13:45:09] 2026-03-14 17:44:37,599 | INFO     | **************************************
[2026-03-14 13:45:09] 2026-03-14 17:44:38,102 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-03-14 13:45:09] 2026-03-14 17:44:38,236 | INFO     | sufficient remaining disk space (51848937472 B)
[2026-03-14 13:45:09] 2026-03-14 17:44:38,237 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 13:45:09] 2026-03-14 17:44:38,237 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 13:45:09] 2026-03-14 17:44:38,237 | INFO     | update_server=False
[2026-03-14 13:45:09] 2026-03-14 17:44:38,237 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 13:45:09] 2026-03-14 17:44:38,239 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 13:45:09] 2026-03-14 17:44:38,251 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 13:45:09] 2026-03-14 17:44:38,515 | INFO     | all payload control threads have been joined
[2026-03-14 13:45:09] 2026-03-14 17:44:38,730 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 13:45:09] 2026-03-14 17:44:38,730 | INFO     | aborting loop
[2026-03-14 13:45:09] 2026-03-14 17:44:38,754 | INFO     | all data control threads have been joined
[2026-03-14 13:45:09] 2026-03-14 17:44:38,790 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 13:45:09] 2026-03-14 17:44:38,941 | INFO     | all job control threads have been joined
[2026-03-14 13:45:09] 2026-03-14 17:44:39,244 | INFO     | [job] retrieve thread has finished
[2026-03-14 13:45:09] 2026-03-14 17:44:39,314 | INFO     | [payload] failed_post thread has finished
[2026-03-14 13:45:09] 2026-03-14 17:44:39,522 | INFO     | [payload] control thread has finished
[2026-03-14 13:45:09] 2026-03-14 17:44:39,612 | INFO     | [payload] validate_post thread has finished
[2026-03-14 13:45:09] 2026-03-14 17:44:39,736 | INFO     | [job] job monitor thread has finished
[2026-03-14 13:45:09] 2026-03-14 17:44:39,761 | INFO     | [data] control thread has finished
[2026-03-14 13:45:09] 2026-03-14 17:44:39,796 | INFO     | [job] queue monitor thread has finished
[2026-03-14 13:45:09] 2026-03-14 17:44:39,952 | INFO     | [job] control thread has finished
[2026-03-14 13:45:09] 2026-03-14 17:44:40,234 | INFO     | [job] validate thread has finished
[2026-03-14 13:45:09] 2026-03-14 17:44:40,258 | INFO     | [data] copytool_out thread has finished
[2026-03-14 13:45:09] 2026-03-14 17:44:40,301 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 13:45:09] 2026-03-14 17:44:40,396 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 13:45:09] 2026-03-14 17:44:40,400 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 13:45:09] 2026-03-14 17:44:40,404 | INFO     | [data] copytool_in thread has finished
[2026-03-14 13:45:09] 2026-03-14 17:44:40,610 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 13:45:09] 2026-03-14 17:44:42,251 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 13:45:09] 2026-03-14 17:44:48,722 | INFO     | [monitor] cgroup control has ended
[2026-03-14 13:45:09] 2026-03-14 17:44:48,757 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140524233295680)>', '<ExcThread(monitor, started 140523872446208)>']
[2026-03-14 13:45:09] 2026-03-14 17:44:53,784 | INFO     | all workflow threads have been joined
[2026-03-14 13:45:09] 2026-03-14 17:44:53,784 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 13:45:09] 2026-03-14 17:44:53,784 | INFO     | traces error code: 0
[2026-03-14 13:45:09] 2026-03-14 17:44:53,785 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 13:45:09] 2026-03-14 17:45:07,581 | INFO     | PID=1292385 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 13:45:09] 2026-03-14 17:45:07,581 | INFO     | .. there are 7 such processes running
[2026-03-14 13:45:09] 2026-03-14 17:45:07,583 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 13:45:09] 2026-03-14 17:45:07,583 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 13:45:09] 2026-03-14 17:45:07,583 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 13:45:09] 2026-03-14 17:45:07,583 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 13:45:09] 2026-03-14 17:45:07,583 | INFO     | [monitor] control thread has ended
[2026-03-14 13:45:09] 2026-03-14 17:45:08,493 [wrapper] ==== pilot stdout END ====
[2026-03-14 13:45:09] 2026-03-14 17:45:08,567 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 13:45:09] 2026-03-14 17:45:08,606 [wrapper] pilotpid: 1292385
[2026-03-14 13:45:09] 2026-03-14 17:45:08,640 [wrapper] Pilot exit status: 0
[2026-03-14 13:45:09] 2026-03-14 17:45:08,828 [wrapper] pandaids: 7044615024
[2026-03-14 13:45:09] 2026-03-14 17:45:09,119 [wrapper] cleanup supervisor_pilot 2442555 1292386
[2026-03-14 13:45:09] 2026-03-14 17:45:09,123 [wrapper] Test setup, not cleaning
[2026-03-14 13:45:09] 2026-03-14 17:45:09,126 [wrapper] apfmon messages muted
[2026-03-14 13:45:09] 2026-03-14 17:45:09,130 [wrapper] ==== wrapper stdout END ====
[2026-03-14 13:45:09] 2026-03-14 17:45:09,133 [wrapper] ==== wrapper stderr END ====
[2026-03-14 13:45:09]  *** Error codes and diagnostics ***
[2026-03-14 13:45:09]     "exeErrorCode": 0,
[2026-03-14 13:45:09]     "exeErrorDiag": "",
[2026-03-14 13:45:09]     "pilotErrorCode": 0,
[2026-03-14 13:45:09]     "pilotErrorDiag": "",
[2026-03-14 13:45:09]  *** Listing of results directory ***
[2026-03-14 13:45:09] total 627088
[2026-03-14 13:45:09] -rw-r--r--. 1 boincer umatlas    585013 Mar 13 12:09 pilot3.tar.gz
[2026-03-14 13:45:09] -rwx------. 1 boincer umatlas     36322 Mar 13 12:10 runpilot2-wrapper.sh
[2026-03-14 13:45:09] -rw-r--r--. 1 boincer umatlas      5111 Mar 13 12:10 queuedata.json
[2026-03-14 13:45:09] -rw-r--r--. 1 boincer umatlas       100 Mar 14 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 13:45:09] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 14 00:02 run_atlas
[2026-03-14 13:45:09] -rw-r--r--. 1 boincer umatlas       105 Mar 14 00:02 job.xml
[2026-03-14 13:45:09] -rw-r--r--. 2 boincer umatlas 438252532 Mar 14 00:02 EVNT.46701403._002403.pool.root.1
[2026-03-14 13:45:09] -rw-r--r--. 2 boincer umatlas     15845 Mar 14 00:02 start_atlas.sh
[2026-03-14 13:45:09] drwxrwx--x. 2 boincer umatlas      4096 Mar 14 00:02 shared
[2026-03-14 13:45:09] -rw-r--r--. 2 boincer umatlas    597530 Mar 14 00:02 input.tar.gz
[2026-03-14 13:45:09] -rw-r--r--. 1 boincer umatlas         0 Mar 14 00:02 boinc_lockfile
[2026-03-14 13:45:09] -rw-r--r--. 1 boincer umatlas      2572 Mar 14 00:02 pandaJob.out
[2026-03-14 13:45:09] -rw-------. 1 boincer umatlas        57 Mar 14 00:02 setup.sh.local
[2026-03-14 13:45:09] -rw-------. 1 boincer umatlas       433 Mar 14 00:05 workernode_map.json
[2026-03-14 13:45:09] -rw-------. 1 boincer umatlas   1004579 Mar 14 00:05 agis_schedconf.cvmfs.json
[2026-03-14 13:45:09] drwx------. 5 boincer umatlas      4096 Mar 14 00:05 pilot3
[2026-03-14 13:45:09] -rw-r--r--. 1 boincer umatlas      6524 Mar 14 13:36 init_data.xml
[2026-03-14 13:45:09] -rw-------. 1 boincer umatlas 186286473 Mar 14 13:43 HITS.48955015._017454.pool.root.1
[2026-03-14 13:45:09] -rw-r--r--. 1 boincer umatlas       531 Mar 14 13:43 boinc_task_state.xml
[2026-03-14 13:45:09] -rw-------. 1 boincer umatlas      1042 Mar 14 13:44 memory_monitor_summary.json
[2026-03-14 13:45:09] -rw-------. 1 boincer umatlas   1511579 Mar 14 13:44 agis_ddmendpoints.agis.ALL.json
[2026-03-14 13:45:09] -rw-------. 1 boincer umatlas    924253 Mar 14 13:44 log.48955015._017454.job.log.tgz.1
[2026-03-14 13:45:09] -rw-------. 1 boincer umatlas      6380 Mar 14 13:44 heartbeat.json
[2026-03-14 13:45:09] -rw-r--r--. 1 boincer umatlas        28 Mar 14 13:45 wrapper_checkpoint.txt
[2026-03-14 13:45:09] -rw-r--r--. 1 boincer umatlas      8192 Mar 14 13:45 boinc_mmap_file
[2026-03-14 13:45:09] -rw-------. 1 boincer umatlas        95 Mar 14 13:45 pilot_heartbeat.json
[2026-03-14 13:45:09] -rw-------. 1 boincer umatlas       822 Mar 14 13:45 pilotlog.txt
[2026-03-14 13:45:09] -rw-------. 1 boincer umatlas   5903940 Mar 14 13:45 log.48955015._017454.job.log.1
[2026-03-14 13:45:09] -rw-------. 1 boincer umatlas       357 Mar 14 13:45 output.list
[2026-03-14 13:45:09] -rw-r--r--. 1 boincer umatlas       620 Mar 14 13:45 runtime_log
[2026-03-14 13:45:09] -rw-------. 1 boincer umatlas   6850560 Mar 14 13:45 result.tar.gz
[2026-03-14 13:45:09] -rw-------. 1 boincer umatlas       659 Mar 14 13:45 zRNMDmaGKL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmnTnLDmhaXcLn.diag
[2026-03-14 13:45:09] -rw-r--r--. 1 boincer umatlas      9342 Mar 14 13:45 runtime_log.err
[2026-03-14 13:45:09] -rw-r--r--. 1 boincer umatlas     21246 Mar 14 13:45 stderr.txt
[2026-03-14 13:45:09] HITS file was successfully produced:
[2026-03-14 13:45:09] -rw-------. 1 boincer umatlas 186286473 Mar 14 13:43 shared/HITS.pool.root.1
[2026-03-14 13:45:09]  *** Contents of shared directory: ***
[2026-03-14 13:45:09] total 617204
[2026-03-14 13:45:09] -rw-r--r--. 2 boincer umatlas 438252532 Mar 14 00:02 ATLAS.root_0
[2026-03-14 13:45:09] -rw-r--r--. 2 boincer umatlas     15845 Mar 14 00:02 start_atlas.sh
[2026-03-14 13:45:09] -rw-r--r--. 2 boincer umatlas    597530 Mar 14 00:02 input.tar.gz
[2026-03-14 13:45:09] -rw-------. 1 boincer umatlas 186286473 Mar 14 13:43 HITS.pool.root.1
[2026-03-14 13:45:09] -rw-------. 1 boincer umatlas   6850560 Mar 14 13:45 result.tar.gz
13:45:11 (1284620): run_atlas exited; CPU time 74020.415558
13:45:11 (1284620): called boinc_finish(0)

</stderr_txt>
]]>

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