Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:31:06 (1684239): wrapper (7.7.26015): starting
10:31:06 (1684239): wrapper: running run_atlas (--nthreads 2)
[2026-03-14 10:31:06] Arguments: --nthreads 2
[2026-03-14 10:31:06] Threads: 2
[2026-03-14 10:31:06] Checking for CVMFS
[2026-03-14 10:31:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 10:31:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 10:31:07] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 10:31:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 10:31:07] 2.9.2.0 12722 17215 62256 157272 0 50 32421146 36864001 0 130560 0 4902243 99.977 638424 6078 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-14 10:31:07] CVMFS is ok
[2026-03-14 10:31:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 10:31:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 10:31:07] Further information can be found at the LHC@home message board.
[2026-03-14 10:31:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 10:31:07] Checking for apptainer binary...
[2026-03-14 10:31:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 10:31:07] Running /usr/bin/apptainer --version
[2026-03-14 10:31:07] apptainer version 1.4.1-1.1
[2026-03-14 10:31:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 10:31:07] thA334a
[2026-03-14 10:31:07] apptainer works
[2026-03-14 10:31:07] Set ATHENA_PROC_NUMBER=2
[2026-03-14 10:31:07] Set ATHENA_CORE_NUMBER=2
[2026-03-14 10:31:07] Starting ATLAS job with PandaID=7044894639
[2026-03-14 10:31:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 12:28:57]  *** The last 200 lines of the pilot log: ***
[2026-03-14 12:28:57] 2026-03-14 11:28:27,575 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 12:28:57] 2026-03-14 11:28:27,575 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 12:28:57] 2026-03-14 11:28:27,904 | INFO     | all data control threads have been joined
[2026-03-14 12:28:57] 2026-03-14 11:28:28,580 | INFO     | [job] retrieve thread has finished
[2026-03-14 12:28:57] 2026-03-14 11:28:28,581 | INFO     | [job] queue monitor thread has finished
[2026-03-14 12:28:57] 2026-03-14 11:28:28,582 | INFO     | [job] job monitor thread has finished
[2026-03-14 12:28:57] 2026-03-14 11:28:28,583 | INFO     | [payload] validate_post thread has finished
[2026-03-14 12:28:57] 2026-03-14 11:28:28,634 | INFO     | all job control threads have been joined
[2026-03-14 12:28:57] 2026-03-14 11:28:28,910 | INFO     | [data] control thread has finished
[2026-03-14 12:28:57] 2026-03-14 11:28:29,061 | INFO     | all payload control threads have been joined
[2026-03-14 12:28:57] 2026-03-14 11:28:29,298 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 12:28:57] 2026-03-14 11:28:29,343 | INFO     | [payload] failed_post thread has finished
[2026-03-14 12:28:57] 2026-03-14 11:28:29,464 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 12:28:57] 2026-03-14 11:28:29,505 | INFO     | [job] validate thread has finished
[2026-03-14 12:28:57] 2026-03-14 11:28:29,581 | INFO     | [data] copytool_out thread has finished
[2026-03-14 12:28:57] 2026-03-14 11:28:29,617 | INFO     | [data] copytool_in thread has finished
[2026-03-14 12:28:57] 2026-03-14 11:28:29,640 | INFO     | [job] control thread has finished
[2026-03-14 12:28:57] 2026-03-14 11:28:29,655 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 12:28:57] 2026-03-14 11:28:30,067 | INFO     | [payload] control thread has finished
[2026-03-14 12:28:57] 2026-03-14 11:28:30,611 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 12:28:57] 2026-03-14 11:28:31,998 | INFO     | [monitor] cgroup control has ended
[2026-03-14 12:28:57] 2026-03-14 11:28:34,619 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 12:28:57] 2026-03-14 11:28:38,211 | INFO     | job.realtimelogging is not enabled
[2026-03-14 12:28:57] 2026-03-14 11:28:39,217 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 12:28:57] 2026-03-14 11:28:40,478 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140054659286848)>', '<ExcThread(monitor, started 140053581920000)>']
[2026-03-14 12:28:57] 2026-03-14 11:28:45,504 | INFO     | all workflow threads have been joined
[2026-03-14 12:28:57] 2026-03-14 11:28:45,505 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 12:28:57] 2026-03-14 11:28:45,506 | INFO     | traces error code: 0
[2026-03-14 12:28:57] 2026-03-14 11:28:45,506 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 12:28:57] 2026-03-14 11:28:57,174 | INFO     | PID=1688270 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 12:28:57] 2026-03-14 11:28:57,175 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 12:28:57] 2026-03-14 11:28:57,175 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 12:28:57] 2026-03-14 11:28:57,175 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 12:28:57] 2026-03-14 11:28:57,175 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 12:28:57] 2026-03-14 11:28:57,175 | INFO     | [monitor] control thread has ended
[2026-03-14 12:28:57] 2026-03-14 11:28:57,213 [wrapper] ==== pilot stdout END ====
[2026-03-14 12:28:57] 2026-03-14 11:28:57,215 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 12:28:57] 2026-03-14 11:28:57,218 [wrapper] pilotpid: 1688270
[2026-03-14 12:28:57] 2026-03-14 11:28:57,220 [wrapper] Pilot exit status: 0
[2026-03-14 12:28:57] 2026-03-14 11:28:57,226 [wrapper] pandaids: 7044894639
[2026-03-14 12:28:57] 2026-03-14 11:28:57,238 [wrapper] cleanup supervisor_pilot 1697653 1688271
[2026-03-14 12:28:57] 2026-03-14 11:28:57,240 [wrapper] Test setup, not cleaning
[2026-03-14 12:28:57] 2026-03-14 11:28:57,242 [wrapper] apfmon messages muted
[2026-03-14 12:28:57] 2026-03-14 11:28:57,244 [wrapper] ==== wrapper stdout END ====
[2026-03-14 12:28:57] 2026-03-14 11:28:57,247 [wrapper] ==== wrapper stderr END ====
[2026-03-14 12:28:57]  *** Error codes and diagnostics ***
[2026-03-14 12:28:57]     "exeErrorCode": 0,
[2026-03-14 12:28:57]     "exeErrorDiag": "",
[2026-03-14 12:28:57]     "pilotErrorCode": 0,
[2026-03-14 12:28:57]     "pilotErrorDiag": "",
[2026-03-14 12:28:57]  *** Listing of results directory ***
[2026-03-14 12:28:57] total 616952
[2026-03-14 12:28:57] -rw-r--r-- 1 boinc boinc    585013 Mar 13 20:44 pilot3.tar.gz
[2026-03-14 12:28:57] -rwx------ 1 boinc boinc     36322 Mar 13 20:47 runpilot2-wrapper.sh
[2026-03-14 12:28:57] -rw-r--r-- 1 boinc boinc      5111 Mar 13 20:49 queuedata.json
[2026-03-14 12:28:57] -rw-r--r-- 1 boinc boinc       100 Mar 14 10:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 12:28:57] -rwxr-xr-x 1 boinc boinc      7986 Mar 14 10:31 run_atlas
[2026-03-14 12:28:57] -rw-r--r-- 1 boinc boinc       105 Mar 14 10:31 job.xml
[2026-03-14 12:28:57] -rw-r--r-- 2 boinc boinc 442059272 Mar 14 10:31 EVNT.46701403._002449.pool.root.1
[2026-03-14 12:28:57] -rw-r--r-- 2 boinc boinc    597529 Mar 14 10:31 input.tar.gz
[2026-03-14 12:28:57] -rw-r--r-- 2 boinc boinc     15845 Mar 14 10:31 start_atlas.sh
[2026-03-14 12:28:57] drwxrwx--x 2 boinc boinc      4096 Mar 14 10:31 shared
[2026-03-14 12:28:57] -rw-r--r-- 1 boinc boinc         0 Mar 14 10:31 boinc_setup_complete
[2026-03-14 12:28:57] -rw-r--r-- 1 boinc boinc      6206 Mar 14 10:31 init_data.xml
[2026-03-14 12:28:57] -rw-r--r-- 1 boinc boinc         0 Mar 14 10:31 boinc_lockfile
[2026-03-14 12:28:57] -rw-r--r-- 1 boinc boinc      2571 Mar 14 10:31 pandaJob.out
[2026-03-14 12:28:57] -rw------- 1 boinc boinc   1004579 Mar 14 10:31 agis_schedconf.cvmfs.json
[2026-03-14 12:28:57] -rw------- 1 boinc boinc   1511579 Mar 14 10:31 agis_ddmendpoints.agis.ALL.json
[2026-03-14 12:28:57] -rw------- 1 boinc boinc       426 Mar 14 10:31 workernode_map.json
[2026-03-14 12:28:57] drwx------ 5 boinc boinc      4096 Mar 14 10:31 pilot3
[2026-03-14 12:28:57] -rw------- 1 boinc boinc 183215145 Mar 14 12:28 HITS.48955015._019676.pool.root.1
[2026-03-14 12:28:57] -rw-r--r-- 1 boinc boinc       530 Mar 14 12:28 boinc_task_state.xml
[2026-03-14 12:28:57] -rw------- 1 boinc boinc      1015 Mar 14 12:28 memory_monitor_summary.json
[2026-03-14 12:28:57] -rw------- 1 boinc boinc    270378 Mar 14 12:28 log.48955015._019676.job.log.tgz.1
[2026-03-14 12:28:57] -rw------- 1 boinc boinc      6309 Mar 14 12:28 heartbeat.json
[2026-03-14 12:28:57] -rw-r--r-- 1 boinc boinc        27 Mar 14 12:28 wrapper_checkpoint.txt
[2026-03-14 12:28:57] -rw-r--r-- 1 boinc boinc      8192 Mar 14 12:28 boinc_mmap_file
[2026-03-14 12:28:57] -rw------- 1 boinc boinc       747 Mar 14 12:28 pilotlog.txt
[2026-03-14 12:28:57] -rw------- 1 boinc boinc        95 Mar 14 12:28 pilot_heartbeat.json
[2026-03-14 12:28:57] -rw------- 1 boinc boinc   1011161 Mar 14 12:28 log.48955015._019676.job.log.1
[2026-03-14 12:28:57] -rw------- 1 boinc boinc       357 Mar 14 12:28 output.list
[2026-03-14 12:28:57] -rw-r--r-- 1 boinc boinc       620 Mar 14 12:28 runtime_log
[2026-03-14 12:28:57] -rw------- 1 boinc boinc   1300480 Mar 14 12:28 result.tar.gz
[2026-03-14 12:28:57] -rw-r--r-- 1 boinc boinc      8901 Mar 14 12:28 runtime_log.err
[2026-03-14 12:28:57] -rw------- 1 boinc boinc       658 Mar 14 12:28 octMDmkeNL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmA5nLDmjOvcZm.diag
[2026-03-14 12:28:57] -rw-r--r-- 1 boinc boinc      7089 Mar 14 12:28 stderr.txt
[2026-03-14 12:28:57] HITS file was successfully produced:
[2026-03-14 12:28:57] -rw------- 1 boinc boinc 183215145 Mar 14 12:28 shared/HITS.pool.root.1
[2026-03-14 12:28:57]  *** Contents of shared directory: ***
[2026-03-14 12:28:57] total 612504
[2026-03-14 12:28:57] -rw-r--r-- 2 boinc boinc 442059272 Mar 14 10:31 ATLAS.root_0
[2026-03-14 12:28:57] -rw-r--r-- 2 boinc boinc    597529 Mar 14 10:31 input.tar.gz
[2026-03-14 12:28:57] -rw-r--r-- 2 boinc boinc     15845 Mar 14 10:31 start_atlas.sh
[2026-03-14 12:28:57] -rw------- 1 boinc boinc 183215145 Mar 14 12:28 HITS.pool.root.1
[2026-03-14 12:28:57] -rw------- 1 boinc boinc   1300480 Mar 14 12:28 result.tar.gz
12:28:59 (1684239): run_atlas exited; CPU time 13426.940596
12:28:59 (1684239): called boinc_finish(0)

</stderr_txt>
]]>

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