Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:07:08 (3232660): wrapper (7.7.26015): starting
14:07:08 (3232660): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 14:07:08] Arguments: --nthreads 4
[2026-03-15 14:07:08] Threads: 4
[2026-03-15 14:07:08] Checking for CVMFS
[2026-03-15 14:07:08] No cvmfs_config command found, will try listing directly
[2026-03-15 14:07:08] CVMFS is ok
[2026-03-15 14:07:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 14:07:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 14:07:08] Further information can be found at the LHC@home message board.
[2026-03-15 14:07:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 14:07:08] Checking for apptainer binary...
[2026-03-15 14:07:08] which: no apptainer in ((null))
[2026-03-15 14:07:08] apptainer is not installed, using version from CVMFS
[2026-03-15 14:07:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 14:07:08] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2026-03-15 14:07:08] apptainer works
[2026-03-15 14:07:08] Set ATHENA_PROC_NUMBER=4
[2026-03-15 14:07:08] Set ATHENA_CORE_NUMBER=4
[2026-03-15 14:07:08] Starting ATLAS job with PandaID=7053703414
[2026-03-15 14:07:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 18:08:53]  *** The last 200 lines of the pilot log: ***
[2026-03-15 18:08:53] 2026-03-15 17:08:06,754 | INFO     | extracted standard info from prmon json
[2026-03-15 18:08:53] 2026-03-15 17:08:06,754 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 18:08:53] 2026-03-15 17:08:06,754 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 18:08:53] 2026-03-15 17:08:06,755 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 18:08:53] 2026-03-15 17:08:06,755 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 18:08:53] 2026-03-15 17:08:06,761 | INFO     | fitting pss+swap vs Time
[2026-03-15 18:08:53] 2026-03-15 17:08:06,761 | INFO     | sum of square deviations: 4127772278.0
[2026-03-15 18:08:53] 2026-03-15 17:08:06,763 | INFO     | sum of deviations: 26838321218.999996
[2026-03-15 18:08:53] 2026-03-15 17:08:06,763 | INFO     | mean x: 1773587265.0
[2026-03-15 18:08:53] 2026-03-15 17:08:06,763 | INFO     | mean y: 2298297.265822785
[2026-03-15 18:08:53] 2026-03-15 17:08:06,763 | INFO     | intersect: -11529370971.820166
[2026-03-15 18:08:53] 2026-03-15 17:08:06,764 | INFO     | chi2: 2.027587390316983
[2026-03-15 18:08:53] 2026-03-15 17:08:06,764 | INFO     | sum of square deviations: 3871990738.0
[2026-03-15 18:08:53] 2026-03-15 17:08:06,766 | INFO     | sum of deviations: 39649782931.50001
[2026-03-15 18:08:53] 2026-03-15 17:08:06,766 | INFO     | mean x: 1773587112.5
[2026-03-15 18:08:53] 2026-03-15 17:08:06,766 | INFO     | mean y: 2305797.6594827585
[2026-03-15 18:08:53] 2026-03-15 17:08:06,766 | INFO     | intersect: -18159500048.253906
[2026-03-15 18:08:53] 2026-03-15 17:08:06,766 | INFO     | chi2: 1.3603343400682844
[2026-03-15 18:08:53] 2026-03-15 17:08:06,767 | INFO     | current chi2=1.3603343400682844 (change=32.90871966531533 %)
[2026-03-15 18:08:53] 2026-03-15 17:08:06,767 | INFO     | sum of square deviations: 3627000098.0
[2026-03-15 18:08:53] 2026-03-15 17:08:06,768 | INFO     | sum of deviations: 38706519771.00001
[2026-03-15 18:08:53] 2026-03-15 17:08:06,768 | INFO     | mean x: 1773586960.0
[2026-03-15 18:08:53] 2026-03-15 17:08:06,769 | INFO     | mean y: 2305210.422907489
[2026-03-15 18:08:53] 2026-03-15 17:08:06,769 | INFO     | intersect: -18925011270.953102
[2026-03-15 18:08:53] 2026-03-15 17:08:06,769 | INFO     | chi2: 1.3605344968101938
[2026-03-15 18:08:53] 2026-03-15 17:08:06,769 | INFO     | current chi2=1.3605344968101938 (change=-0.014713790280364639 %)
[2026-03-15 18:08:53] 2026-03-15 17:08:06,769 | INFO     | right removable region: 226
[2026-03-15 18:08:53] 2026-03-15 17:08:06,770 | INFO     | sum of square deviations: 3871990738.0
[2026-03-15 18:08:53] 2026-03-15 17:08:06,771 | INFO     | sum of deviations: -5022746405.0
[2026-03-15 18:08:53] 2026-03-15 17:08:06,771 | INFO     | mean x: 1773587417.5
[2026-03-15 18:08:53] 2026-03-15 17:08:06,771 | INFO     | mean y: 2317103.2844827585
[2026-03-15 18:08:53] 2026-03-15 17:08:06,771 | INFO     | intersect: 2303014710.2737894
[2026-03-15 18:08:53] 2026-03-15 17:08:06,772 | INFO     | chi2: 0.6848330793679426
[2026-03-15 18:08:53] 2026-03-15 17:08:06,772 | INFO     | current chi2=0.6848330793679426 (change=66.22423858826232 %)
[2026-03-15 18:08:53] 2026-03-15 17:08:06,772 | INFO     | sum of square deviations: 3627000098.0
[2026-03-15 18:08:53] 2026-03-15 17:08:06,774 | INFO     | sum of deviations: -6688437232.000003
[2026-03-15 18:08:53] 2026-03-15 17:08:06,774 | INFO     | mean x: 1773587570.0
[2026-03-15 18:08:53] 2026-03-15 17:08:06,774 | INFO     | mean y: 2318134.8766519823
[2026-03-15 18:08:53] 2026-03-15 17:08:06,774 | INFO     | intersect: 3272935398.9736795
[2026-03-15 18:08:53] 2026-03-15 17:08:06,774 | INFO     | chi2: 0.6816196525118722
[2026-03-15 18:08:53] 2026-03-15 17:08:06,774 | INFO     | current chi2=0.6816196525118722 (change=0.4692277509486238 %)
[2026-03-15 18:08:53] 2026-03-15 17:08:06,774 | INFO     | left removable region: 20
[2026-03-15 18:08:53] 2026-03-15 17:08:06,775 | INFO     | sum of square deviations: 2710627567.5
[2026-03-15 18:08:53] 2026-03-15 17:08:06,776 | INFO     | sum of deviations: 3656595529.0
[2026-03-15 18:08:53] 2026-03-15 17:08:06,776 | INFO     | mean x: 1773587539.5
[2026-03-15 18:08:53] 2026-03-15 17:08:06,776 | INFO     | mean y: 2327997.854368932
[2026-03-15 18:08:53] 2026-03-15 17:08:06,776 | INFO     | intersect: -2390214727.3002963
[2026-03-15 18:08:53] 2026-03-15 17:08:06,777 | INFO     | chi2: 0.00031343469971002215
[2026-03-15 18:08:53] 2026-03-15 17:08:06,777 | INFO     | current memory leak: 1.35 B/s (using 206 data points, chi2=0.00)
[2026-03-15 18:08:53] 2026-03-15 17:08:06,778 | INFO     | could have reported an average CPU frequency of 2572 MHz (11 samples)
[2026-03-15 18:08:53] 2026-03-15 17:08:06,778 | INFO     | ..............................
[2026-03-15 18:08:53] 2026-03-15 17:08:06,778 | INFO     | . Timing measurements:
[2026-03-15 18:08:53] 2026-03-15 17:08:06,778 | INFO     | . get job = 0 s
[2026-03-15 18:08:53] 2026-03-15 17:08:06,778 | INFO     | . initial setup = 6 s
[2026-03-15 18:08:53] 2026-03-15 17:08:06,778 | INFO     | . payload setup = 6 s
[2026-03-15 18:08:53] 2026-03-15 17:08:06,778 | INFO     | . stage-in = 0 s
[2026-03-15 18:08:53] 2026-03-15 17:08:06,778 | INFO     | . payload execution = 14419 s
[2026-03-15 18:08:53] 2026-03-15 17:08:06,778 | INFO     | . stage-out = 1 s
[2026-03-15 18:08:53] 2026-03-15 17:08:06,778 | INFO     | . log creation = 0 s
[2026-03-15 18:08:53] 2026-03-15 17:08:06,779 | INFO     | ..............................
[2026-03-15 18:08:53] 2026-03-15 17:08:06,875 | INFO     | 
[2026-03-15 18:08:53] 2026-03-15 17:08:06,875 | INFO     | job summary report
[2026-03-15 18:08:53] 2026-03-15 17:08:06,875 | INFO     | --------------------------------------------------
[2026-03-15 18:08:53] 2026-03-15 17:08:06,875 | INFO     | PanDA job id: 7053703414
[2026-03-15 18:08:53] 2026-03-15 17:08:06,875 | INFO     | task id: 48967085
[2026-03-15 18:08:53] 2026-03-15 17:08:06,875 | INFO     | errors: (none)
[2026-03-15 18:08:53] 2026-03-15 17:08:06,875 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 18:08:53] 2026-03-15 17:08:06,876 | INFO     | pilot state: finished 
[2026-03-15 18:08:53] 2026-03-15 17:08:06,876 | INFO     | transexitcode: 0
[2026-03-15 18:08:53] 2026-03-15 17:08:06,876 | INFO     | exeerrorcode: 0
[2026-03-15 18:08:53] 2026-03-15 17:08:06,876 | INFO     | exeerrordiag: 
[2026-03-15 18:08:53] 2026-03-15 17:08:06,876 | INFO     | exitcode: 0
[2026-03-15 18:08:53] 2026-03-15 17:08:06,876 | INFO     | exitmsg: OK
[2026-03-15 18:08:53] 2026-03-15 17:08:06,876 | INFO     | cpuconsumptiontime: 54645 s
[2026-03-15 18:08:53] 2026-03-15 17:08:06,876 | INFO     | nevents: 400
[2026-03-15 18:08:53] 2026-03-15 17:08:06,876 | INFO     | neventsw: 0
[2026-03-15 18:08:53] 2026-03-15 17:08:06,876 | INFO     | pid: 3241251
[2026-03-15 18:08:53] 2026-03-15 17:08:06,876 | INFO     | pgrp: 3241251
[2026-03-15 18:08:53] 2026-03-15 17:08:06,876 | INFO     | corecount: 4
[2026-03-15 18:08:53] 2026-03-15 17:08:06,877 | INFO     | event service: False
[2026-03-15 18:08:53] 2026-03-15 17:08:06,877 | INFO     | sizes: {0: 2279152, 1: 2280281, 12: 2280281, 14429: 2311176, 14431: 2320390}
[2026-03-15 18:08:53] 2026-03-15 17:08:06,877 | INFO     | --------------------------------------------------
[2026-03-15 18:08:53] 2026-03-15 17:08:06,877 | INFO     | 
[2026-03-15 18:08:53] 2026-03-15 17:08:06,877 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot44/slots/0
[2026-03-15 18:08:53] 2026-03-15 17:08:06,901 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 18:08:53] 2026-03-15 17:08:06,901 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 18:08:53] 2026-03-15 17:08:06,901 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 18:08:53] 2026-03-15 17:08:06,901 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 18:08:53] 2026-03-15 17:08:06,901 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 18:08:53] 2026-03-15 17:08:06,901 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 18:08:53] 2026-03-15 17:08:06,902 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 18:08:53] 2026-03-15 17:08:06,902 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 18:08:53] 2026-03-15 17:08:06,902 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 18:08:53] 2026-03-15 17:08:06,902 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 18:08:53] 2026-03-15 17:08:06,902 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 18:08:53] 2026-03-15 17:08:06,902 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 18:08:53] 2026-03-15 17:08:06,902 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 18:08:53] 2026-03-15 17:08:06,902 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 18:08:53] 2026-03-15 17:08:06,902 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 18:08:53] 2026-03-15 17:08:06,902 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 18:08:53] 2026-03-15 17:08:06,902 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 18:08:53] 2026-03-15 17:08:06,903 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 18:08:53] 2026-03-15 17:08:06,903 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 18:08:53] 2026-03-15 17:08:06,903 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 18:08:53] 2026-03-15 17:08:06,903 | INFO     | job 7053703414 has completed (purged errors)
[2026-03-15 18:08:53] 2026-03-15 17:08:06,903 | INFO     | overall cleanup function is called
[2026-03-15 18:08:53] 2026-03-15 17:08:07,911 | INFO     | --- collectZombieJob: --- 10, [3241251]
[2026-03-15 18:08:53] 2026-03-15 17:08:07,911 | INFO     | zombie collector waiting for pid 3241251
[2026-03-15 18:08:53] 2026-03-15 17:08:07,911 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 18:08:53] 2026-03-15 17:08:07,911 | INFO     | collected zombie processes
[2026-03-15 18:08:53] 2026-03-15 17:08:07,911 | INFO     | will attempt to kill all subprocesses of pid=3241251
[2026-03-15 18:08:53] 2026-03-15 17:08:08,326 | INFO     | process IDs to be killed: [3241251] (in reverse order)
[2026-03-15 18:08:53] 2026-03-15 17:08:08,430 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 18:08:53] 2026-03-15 17:08:08,430 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 18:08:53] 2026-03-15 17:08:08,440 | INFO     | did not find any defunct processes belonging to 3241251
[2026-03-15 18:08:53] 2026-03-15 17:08:08,450 | INFO     | did not find any defunct processes belonging to 3241251
[2026-03-15 18:08:53] 2026-03-15 17:08:08,450 | INFO     | ready for new job
[2026-03-15 18:08:53] 2026-03-15 17:08:08,450 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 18:08:53] 2026-03-15 17:08:08,452 | INFO     | **************************************
[2026-03-15 18:08:53] 2026-03-15 17:08:08,452 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 18:08:53] 2026-03-15 17:08:08,452 | INFO     | **************************************
[2026-03-15 18:08:53] 2026-03-15 17:08:08,452 | INFO     | 
[2026-03-15 18:08:53] 2026-03-15 17:08:08,455 | INFO     | architecture information:
[2026-03-15 18:08:53] 2026-03-15 17:08:08,455 | INFO     | executing command: cat /etc/os-release
[2026-03-15 18:08:53] 2026-03-15 17:08:08,467 | INFO     | cat /etc/os-release:
[2026-03-15 18:08:53] NAME="CentOS Linux"
[2026-03-15 18:08:53] VERSION="7 (Core)"
[2026-03-15 18:08:53] ID="centos"
[2026-03-15 18:08:53] ID_LIKE="rhel fedora"
[2026-03-15 18:08:53] VERSION_ID="7"
[2026-03-15 18:08:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 18:08:53] ANSI_COLOR="0;31"
[2026-03-15 18:08:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 18:08:53] HOME_URL="https://www.centos.org/"
[2026-03-15 18:08:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 18:08:53] 
[2026-03-15 18:08:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 18:08:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 18:08:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 18:08:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 18:08:53] 
[2026-03-15 18:08:53] 2026-03-15 17:08:08,467 | INFO     | **************************************
[2026-03-15 18:08:53] 2026-03-15 17:08:08,968 | INFO     | executing command: df -mP /var/lib/boinc/var/slot44/slots/0
[2026-03-15 18:08:53] 2026-03-15 17:08:08,985 | INFO     | sufficient remaining disk space (39864762368 B)
[2026-03-15 18:08:53] 2026-03-15 17:08:08,986 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 18:08:53] 2026-03-15 17:08:08,986 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 18:08:53] 2026-03-15 17:08:08,986 | INFO     | update_server=False
[2026-03-15 18:08:53] 2026-03-15 17:08:08,986 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 18:08:53] 2026-03-15 17:08:08,986 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 18:08:53] 2026-03-15 17:08:09,367 | INFO     | all data control threads have been joined
[2026-03-15 18:08:53] 2026-03-15 17:08:09,649 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 18:08:53] 2026-03-15 17:08:09,991 | INFO     | [job] retrieve thread has finished
[2026-03-15 18:08:53] 2026-03-15 17:08:10,095 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 18:08:53] 2026-03-15 17:08:10,107 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 18:08:53] 2026-03-15 17:08:10,122 | INFO     | [job] validate thread has finished
[2026-03-15 18:08:53] 2026-03-15 17:08:10,128 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 18:08:53] 2026-03-15 17:08:10,249 | INFO     | all job control threads have been joined
[2026-03-15 18:08:53] 2026-03-15 17:08:10,257 | INFO     | [data] copytool_in thread has finished
[2026-03-15 18:08:53] 2026-03-15 17:08:10,373 | INFO     | [data] control thread has finished
[2026-03-15 18:08:53] 2026-03-15 17:08:10,470 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 18:08:53] 2026-03-15 17:08:10,480 | INFO     | all payload control threads have been joined
[2026-03-15 18:08:53] 2026-03-15 17:08:11,229 | INFO     | [payload] validate_post thread has finished
[2026-03-15 18:08:53] 2026-03-15 17:08:11,255 | INFO     | [job] control thread has finished
[2026-03-15 18:08:53] 2026-03-15 17:08:11,486 | INFO     | [payload] control thread has finished
[2026-03-15 18:08:53] 2026-03-15 17:08:11,593 | INFO     | [payload] failed_post thread has finished
[2026-03-15 18:08:53] 2026-03-15 17:08:11,654 | INFO     | [data] copytool_out thread has finished
[2026-03-15 18:08:53] 2026-03-15 17:08:11,885 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 18:08:53] 2026-03-15 17:08:11,920 | WARNING  | process 3241251 can no longer be monitored (due to stat problems) - aborting
[2026-03-15 18:08:53] 2026-03-15 17:08:12,248 | INFO     | using path: /var/lib/boinc/var/slot44/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 18:08:53] 2026-03-15 17:08:12,672 | INFO     | number of running child processes to parent process 3241251: 1
[2026-03-15 18:08:53] 2026-03-15 17:08:12,673 | INFO     | maximum number of monitored processes: 6
[2026-03-15 18:08:53] 2026-03-15 17:08:12,673 | INFO     | aborting job monitoring since job object (job id=7053703414) has expired
[2026-03-15 18:08:53] 2026-03-15 17:08:12,673 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 18:08:53] 2026-03-15 17:08:12,673 | INFO     | will abort loop
[2026-03-15 18:08:53] 2026-03-15 17:08:12,890 | INFO     | [job] queue monitor thread has finished
[2026-03-15 18:08:53] 2026-03-15 17:08:12,993 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 18:08:53] 2026-03-15 17:08:13,678 | INFO     | [job] job monitor thread has finished
[2026-03-15 18:08:53] 2026-03-15 17:08:40,037 | INFO     | PID=3236443 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 18:08:53] 2026-03-15 17:08:40,038 | INFO     | .. there are 12 such processes running
[2026-03-15 18:08:53] 2026-03-15 17:08:40,038 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 18:08:53] 2026-03-15 17:08:40,038 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 18:08:53] 2026-03-15 17:08:40,038 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 18:08:53] 2026-03-15 17:08:48,229 | INFO     | [monitor] cgroup control has ended
[2026-03-15 18:08:53] 2026-03-15 17:08:48,474 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22808466147136)>', '<ExcThread(monitor, started 22808149083904)>']
[2026-03-15 18:08:53] 2026-03-15 17:08:49,083 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 18:08:53] 2026-03-15 17:08:49,083 | INFO     | [monitor] control thread has ended
[2026-03-15 18:08:53] 2026-03-15 17:08:53,499 | INFO     | all workflow threads have been joined
[2026-03-15 18:08:53] 2026-03-15 17:08:53,499 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 18:08:53] 2026-03-15 17:08:53,499 | INFO     | traces error code: 0
[2026-03-15 18:08:53] 2026-03-15 17:08:53,500 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 18:08:53] 2026-03-15 17:08:53,667 [wrapper] ==== pilot stdout END ====
[2026-03-15 18:08:53] 2026-03-15 17:08:53,670 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 18:08:53] 2026-03-15 17:08:53,673 [wrapper] pilotpid: 3236443
[2026-03-15 18:08:53] 2026-03-15 17:08:53,676 [wrapper] Pilot exit status: 0
[2026-03-15 18:08:53] 2026-03-15 17:08:53,689 [wrapper] pandaids: 7053703414
[2026-03-15 18:08:53] 2026-03-15 17:08:53,772 [wrapper] cleanup supervisor_pilot 3536439 3236444
[2026-03-15 18:08:53] 2026-03-15 17:08:53,781 [wrapper] Test setup, not cleaning
[2026-03-15 18:08:53] 2026-03-15 17:08:53,784 [wrapper] apfmon messages muted
[2026-03-15 18:08:53] 2026-03-15 17:08:53,787 [wrapper] ==== wrapper stdout END ====
[2026-03-15 18:08:53] 2026-03-15 17:08:53,790 [wrapper] ==== wrapper stderr END ====
[2026-03-15 18:08:53]  *** Error codes and diagnostics ***
[2026-03-15 18:08:53]     "exeErrorCode": 0,
[2026-03-15 18:08:53]     "exeErrorDiag": "",
[2026-03-15 18:08:53]     "pilotErrorCode": 0,
[2026-03-15 18:08:53]     "pilotErrorDiag": "",
[2026-03-15 18:08:53]  *** Listing of results directory ***
[2026-03-15 18:08:53] total 412636
[2026-03-15 18:08:53] -rw-r--r--. 1 boinc boinc    585013 Mar 13 17:09 pilot3.tar.gz
[2026-03-15 18:08:53] -rw-r--r--. 1 boinc boinc      5111 Mar 13 17:13 queuedata.json
[2026-03-15 18:08:53] -rwx------. 1 boinc boinc     36322 Mar 13 17:13 runpilot2-wrapper.sh
[2026-03-15 18:08:53] -rw-r--r--. 1 boinc boinc       100 Mar 15 14:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 18:08:53] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 14:07 run_atlas
[2026-03-15 18:08:53] -rw-r--r--. 1 boinc boinc       105 Mar 15 14:07 job.xml
[2026-03-15 18:08:53] -rw-r--r--. 1 boinc boinc      6563 Mar 15 14:07 init_data.xml
[2026-03-15 18:08:53] -rw-r--r--. 2 boinc boinc 212166889 Mar 15 14:07 EVNT.48967083._000858.pool.root.1
[2026-03-15 18:08:53] -rw-r--r--. 2 boinc boinc     15845 Mar 15 14:07 start_atlas.sh
[2026-03-15 18:08:53] drwxrwx--x. 2 boinc boinc      4096 Mar 15 14:07 shared
[2026-03-15 18:08:53] -rw-r--r--. 2 boinc boinc    597523 Mar 15 14:07 input.tar.gz
[2026-03-15 18:08:53] -rw-r--r--. 1 boinc boinc         0 Mar 15 14:07 boinc_lockfile
[2026-03-15 18:08:53] -rw-r--r--. 1 boinc boinc      2563 Mar 15 14:07 pandaJob.out
[2026-03-15 18:08:53] -rw-------. 1 boinc boinc   1006481 Mar 15 14:07 agis_schedconf.cvmfs.json
[2026-03-15 18:08:53] -rw-------. 1 boinc boinc       452 Mar 15 14:07 workernode_map.json
[2026-03-15 18:08:53] drwx------. 5 boinc boinc      4096 Mar 15 14:07 pilot3
[2026-03-15 18:08:53] -rw-------. 1 boinc boinc 201576966 Mar 15 18:07 HITS.48967085._020987.pool.root.1
[2026-03-15 18:08:53] -rw-r--r--. 1 boinc boinc       530 Mar 15 18:07 boinc_task_state.xml
[2026-03-15 18:08:53] -rw-------. 1 boinc boinc        95 Mar 15 18:07 pilot_heartbeat.json
[2026-03-15 18:08:53] -rw-------. 1 boinc boinc      1032 Mar 15 18:08 memory_monitor_summary.json
[2026-03-15 18:08:53] -rw-------. 1 boinc boinc   1511579 Mar 15 18:08 agis_ddmendpoints.agis.ALL.json
[2026-03-15 18:08:53] -rw-------. 1 boinc boinc    396941 Mar 15 18:08 log.48967085._020987.job.log.tgz.1
[2026-03-15 18:08:53] -rw-------. 1 boinc boinc      6404 Mar 15 18:08 heartbeat.json
[2026-03-15 18:08:53] -rw-r--r--. 1 boinc boinc      8192 Mar 15 18:08 boinc_mmap_file
[2026-03-15 18:08:53] -rw-r--r--. 1 boinc boinc        28 Mar 15 18:08 wrapper_checkpoint.txt
[2026-03-15 18:08:53] -rw-------. 1 boinc boinc      5361 Mar 15 18:08 pilotlog.txt
[2026-03-15 18:08:53] -rw-------. 1 boinc boinc   2029103 Mar 15 18:08 log.48967085._020987.job.log.1
[2026-03-15 18:08:53] -rw-------. 1 boinc boinc       357 Mar 15 18:08 output.list
[2026-03-15 18:08:53] -rw-r--r--. 1 boinc boinc       620 Mar 15 18:08 runtime_log
[2026-03-15 18:08:53] -rw-------. 1 boinc boinc   2447360 Mar 15 18:08 result.tar.gz
[2026-03-15 18:08:53] -rw-r--r--. 1 boinc boinc      9205 Mar 15 18:08 runtime_log.err
[2026-03-15 18:08:53] -rw-------. 1 boinc boinc       665 Mar 15 18:08 brDODmXJKL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmHVnLDmqPvtUn.diag
[2026-03-15 18:08:53] -rw-r--r--. 1 boinc boinc     20844 Mar 15 18:08 stderr.txt
[2026-03-15 18:08:53] HITS file was successfully produced:
[2026-03-15 18:08:53] -rw-------. 1 boinc boinc 201576966 Mar 15 18:07 shared/HITS.pool.root.1
[2026-03-15 18:08:53]  *** Contents of shared directory: ***
[2026-03-15 18:08:53] total 407052
[2026-03-15 18:08:53] -rw-r--r--. 2 boinc boinc 212166889 Mar 15 14:07 ATLAS.root_0
[2026-03-15 18:08:53] -rw-r--r--. 2 boinc boinc     15845 Mar 15 14:07 start_atlas.sh
[2026-03-15 18:08:53] -rw-r--r--. 2 boinc boinc    597523 Mar 15 14:07 input.tar.gz
[2026-03-15 18:08:53] -rw-------. 1 boinc boinc 201576966 Mar 15 18:07 HITS.pool.root.1
[2026-03-15 18:08:53] -rw-------. 1 boinc boinc   2447360 Mar 15 18:08 result.tar.gz
18:08:55 (3232660): run_atlas exited; CPU time 55286.281745
18:08:55 (3232660): called boinc_finish(0)

</stderr_txt>
]]>

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