Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:53:55 (1888731): wrapper (7.7.26015): starting
16:53:55 (1888731): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 16:53:55] Arguments: --nthreads 8
[2026-03-13 16:53:55] Threads: 8
[2026-03-13 16:53:55] Checking for CVMFS
[2026-03-13 16:53:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 16:53:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 16:53:56] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 16:54:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 16:54:17] 2.13.3.0 2282030 53293 375148 157253 0 422 32648509 32935937 34392 16776704 0 212418972 99.670 179826837 30120 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-13 16:54:17] CVMFS is ok
[2026-03-13 16:54:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 16:54:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 16:54:17] Further information can be found at the LHC@home message board.
[2026-03-13 16:54:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 16:54:17] Checking for apptainer binary...
[2026-03-13 16:54:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 16:54:17] Running /usr/bin/apptainer --version
[2026-03-13 16:54:17] apptainer version 1.4.5-2.el9
[2026-03-13 16:54:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 16:54:18] c6-12-27-1.aglt2.org
[2026-03-13 16:54:18] apptainer works
[2026-03-13 16:54:18] Set ATHENA_PROC_NUMBER=8
[2026-03-13 16:54:18] Set ATHENA_CORE_NUMBER=8
[2026-03-13 16:54:18] Starting ATLAS job with PandaID=7044561876
[2026-03-13 16:54:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 20:31:31]  *** The last 200 lines of the pilot log: ***
[2026-03-13 20:31:31] 2026-03-14 00:30:51,860 | INFO     | number of running child processes to parent process 1900989: 1
[2026-03-13 20:31:31] 2026-03-14 00:30:51,861 | INFO     | maximum number of monitored processes: 6
[2026-03-13 20:31:31] 2026-03-14 00:30:51,963 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7044561876/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 20:31:31] 2026-03-14 00:30:51,964 | INFO     | extracted standard info from prmon json
[2026-03-13 20:31:31] 2026-03-14 00:30:51,964 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 20:31:31] 2026-03-14 00:30:51,964 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 20:31:31] 2026-03-14 00:30:51,976 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 20:31:31] 2026-03-14 00:30:51,977 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 20:31:31] 2026-03-14 00:30:52,006 | INFO     | fitting pss+swap vs Time
[2026-03-13 20:31:31] 2026-03-14 00:30:52,006 | INFO     | sum of square deviations: 2912803400.1326976
[2026-03-13 20:31:31] 2026-03-14 00:30:52,007 | INFO     | sum of deviations: 22420614566.687202
[2026-03-13 20:31:31] 2026-03-14 00:30:52,008 | INFO     | mean x: 1773441810.3886256
[2026-03-13 20:31:31] 2026-03-14 00:30:52,008 | INFO     | mean y: 2472352.3696682462
[2026-03-13 20:31:31] 2026-03-14 00:30:52,008 | INFO     | intersect: -13648176120.973892
[2026-03-13 20:31:31] 2026-03-14 00:30:52,008 | INFO     | chi2: 2.5926867090147185
[2026-03-13 20:31:31] 2026-03-14 00:30:52,008 | INFO     | sum of square deviations: 2710607217.650497
[2026-03-13 20:31:31] 2026-03-14 00:30:52,036 | INFO     | sum of deviations: 34277696889.708748
[2026-03-13 20:31:31] 2026-03-14 00:30:52,036 | INFO     | mean x: 1773441657.893204
[2026-03-13 20:31:31] 2026-03-14 00:30:52,036 | INFO     | mean y: 2481109.0776699027
[2026-03-13 20:31:31] 2026-03-14 00:30:52,036 | INFO     | intersect: -22424042071.782516
[2026-03-13 20:31:31] 2026-03-14 00:30:52,037 | INFO     | chi2: 1.9117316413868286
[2026-03-13 20:31:31] 2026-03-14 00:30:52,037 | INFO     | current chi2=1.9117316413868286 (change=26.26445629779422 %)
[2026-03-13 20:31:31] 2026-03-14 00:30:52,037 | INFO     | sum of square deviations: 2518005054.3581977
[2026-03-13 20:31:31] 2026-03-14 00:30:52,038 | INFO     | sum of deviations: 33378932594.597057
[2026-03-13 20:31:31] 2026-03-14 00:30:52,039 | INFO     | mean x: 1773441505.402985
[2026-03-13 20:31:31] 2026-03-14 00:30:52,039 | INFO     | mean y: 2480397.3383084578
[2026-03-13 20:31:31] 2026-03-14 00:30:52,039 | INFO     | intersect: -23506441622.834145
[2026-03-13 20:31:31] 2026-03-14 00:30:52,058 | INFO     | chi2: 1.913176029884264
[2026-03-13 20:31:31] 2026-03-14 00:30:52,058 | INFO     | current chi2=1.913176029884264 (change=-0.07555393582268326 %)
[2026-03-13 20:31:31] 2026-03-14 00:30:52,059 | INFO     | right removable region: 200
[2026-03-13 20:31:31] 2026-03-14 00:30:52,059 | INFO     | sum of square deviations: 2710633556.7184544
[2026-03-13 20:31:31] 2026-03-14 00:30:52,060 | INFO     | sum of deviations: -17230359511.097084
[2026-03-13 20:31:31] 2026-03-14 00:30:52,060 | INFO     | mean x: 1773441962.8737864
[2026-03-13 20:31:31] 2026-03-14 00:30:52,060 | INFO     | mean y: 2502014.1116504855
[2026-03-13 20:31:31] 2026-03-14 00:30:52,061 | INFO     | intersect: 11275528025.555992
[2026-03-13 20:31:31] 2026-03-14 00:30:52,061 | INFO     | chi2: 0.8106325149482171
[2026-03-13 20:31:31] 2026-03-14 00:30:52,061 | INFO     | current chi2=0.8106325149482171 (change=68.73388087617126 %)
[2026-03-13 20:31:31] 2026-03-14 00:30:52,061 | INFO     | sum of square deviations: 2517983203.5024924
[2026-03-13 20:31:31] 2026-03-14 00:30:52,138 | INFO     | sum of deviations: -19336863534.079605
[2026-03-13 20:31:31] 2026-03-14 00:30:52,138 | INFO     | mean x: 1773442115.3830845
[2026-03-13 20:31:31] 2026-03-14 00:30:52,138 | INFO     | mean y: 2503644.7412935323
[2026-03-13 20:31:31] 2026-03-14 00:30:52,138 | INFO     | intersect: 13621660485.44268
[2026-03-13 20:31:31] 2026-03-14 00:30:52,138 | INFO     | chi2: 0.7937001167004147
[2026-03-13 20:31:31] 2026-03-14 00:30:52,139 | INFO     | current chi2=0.7937001167004147 (change=2.0887884381104533 %)
[2026-03-13 20:31:31] 2026-03-14 00:30:52,139 | INFO     | left removable region: 20
[2026-03-13 20:31:31] 2026-03-14 00:30:52,139 | INFO     | sum of square deviations: 1808418325.311111
[2026-03-13 20:31:31] 2026-03-14 00:30:52,140 | INFO     | sum of deviations: 2825769058.8999996
[2026-03-13 20:31:31] 2026-03-14 00:30:52,140 | INFO     | mean x: 1773442084.8777778
[2026-03-13 20:31:31] 2026-03-14 00:30:52,140 | INFO     | mean y: 2504412.45
[2026-03-13 20:31:31] 2026-03-14 00:30:52,140 | INFO     | intersect: -2768612038.350512
[2026-03-13 20:31:31] 2026-03-14 00:30:52,141 | INFO     | chi2: 0.0016826229062958274
[2026-03-13 20:31:31] 2026-03-14 00:30:52,141 | INFO     | current memory leak: 1.56 B/s (using 180 data points, chi2=0.00)
[2026-03-13 20:31:31] 2026-03-14 00:30:52,163 | INFO     | could have reported an average CPU frequency of 2645 MHz (11 samples)
[2026-03-13 20:31:31] 2026-03-14 00:30:52,164 | INFO     | ..............................
[2026-03-13 20:31:31] 2026-03-14 00:30:52,164 | INFO     | . Timing measurements:
[2026-03-13 20:31:31] 2026-03-14 00:30:52,164 | INFO     | . get job = 0 s
[2026-03-13 20:31:31] 2026-03-14 00:30:52,164 | INFO     | . initial setup = 29 s
[2026-03-13 20:31:31] 2026-03-14 00:30:52,164 | INFO     | . payload setup = 35 s
[2026-03-13 20:31:31] 2026-03-14 00:30:52,164 | INFO     | . stage-in = 0 s
[2026-03-13 20:31:31] 2026-03-14 00:30:52,164 | INFO     | . payload execution = 12853 s
[2026-03-13 20:31:31] 2026-03-14 00:30:52,164 | INFO     | . stage-out = 6 s
[2026-03-13 20:31:31] 2026-03-14 00:30:52,164 | INFO     | . log creation = 1 s
[2026-03-13 20:31:31] 2026-03-14 00:30:52,164 | INFO     | ..............................
[2026-03-13 20:31:31] 2026-03-14 00:30:53,263 | INFO     | 
[2026-03-13 20:31:31] 2026-03-14 00:30:53,263 | INFO     | job summary report
[2026-03-13 20:31:31] 2026-03-14 00:30:53,267 | INFO     | --------------------------------------------------
[2026-03-13 20:31:31] 2026-03-14 00:30:53,267 | INFO     | PanDA job id: 7044561876
[2026-03-13 20:31:31] 2026-03-14 00:30:53,267 | INFO     | task id: 48955015
[2026-03-13 20:31:31] 2026-03-14 00:30:53,267 | INFO     | errors: (none)
[2026-03-13 20:31:31] 2026-03-14 00:30:53,267 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 20:31:31] 2026-03-14 00:30:53,268 | INFO     | pilot state: finished 
[2026-03-13 20:31:31] 2026-03-14 00:30:53,268 | INFO     | transexitcode: 0
[2026-03-13 20:31:31] 2026-03-14 00:30:53,268 | INFO     | exeerrorcode: 0
[2026-03-13 20:31:31] 2026-03-14 00:30:53,268 | INFO     | exeerrordiag: 
[2026-03-13 20:31:31] 2026-03-14 00:30:53,268 | INFO     | exitcode: 0
[2026-03-13 20:31:31] 2026-03-14 00:30:53,268 | INFO     | exitmsg: OK
[2026-03-13 20:31:31] 2026-03-14 00:30:53,268 | INFO     | cpuconsumptiontime: 38343 s
[2026-03-13 20:31:31] 2026-03-14 00:30:53,268 | INFO     | nevents: 400
[2026-03-13 20:31:31] 2026-03-14 00:30:53,268 | INFO     | neventsw: 0
[2026-03-13 20:31:31] 2026-03-14 00:30:53,268 | INFO     | pid: 1900989
[2026-03-13 20:31:31] 2026-03-14 00:30:53,268 | INFO     | pgrp: 1900989
[2026-03-13 20:31:31] 2026-03-14 00:30:53,268 | INFO     | corecount: 8
[2026-03-13 20:31:31] 2026-03-14 00:30:53,268 | INFO     | event service: False
[2026-03-13 20:31:31] 2026-03-14 00:30:53,268 | INFO     | sizes: {0: 2279747, 1: 2280264, 2: 2280292, 12894: 2310091, 12895: 2310090, 12902: 2319144, 12907: 2319328, 12908: 2319522}
[2026-03-13 20:31:31] 2026-03-14 00:30:53,268 | INFO     | --------------------------------------------------
[2026-03-13 20:31:31] 2026-03-14 00:30:53,269 | INFO     | 
[2026-03-13 20:31:31] 2026-03-14 00:30:53,269 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-13 20:31:31] 2026-03-14 00:30:53,372 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 20:31:31] 2026-03-14 00:30:53,373 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 20:31:31] 2026-03-14 00:30:53,373 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 20:31:31] 2026-03-14 00:30:53,373 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 20:31:31] 2026-03-14 00:30:53,373 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 20:31:31] 2026-03-14 00:30:53,373 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 20:31:31] 2026-03-14 00:30:53,373 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 20:31:31] 2026-03-14 00:30:53,373 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 20:31:31] 2026-03-14 00:30:53,373 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 20:31:31] 2026-03-14 00:30:53,373 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 20:31:31] 2026-03-14 00:30:53,373 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 20:31:31] 2026-03-14 00:30:53,373 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 20:31:31] 2026-03-14 00:30:53,374 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 20:31:31] 2026-03-14 00:30:53,374 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 20:31:31] 2026-03-14 00:30:53,374 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 20:31:31] 2026-03-14 00:30:53,374 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 20:31:31] 2026-03-14 00:30:53,374 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 20:31:31] 2026-03-14 00:30:53,374 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 20:31:31] 2026-03-14 00:30:53,374 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 20:31:31] 2026-03-14 00:30:53,374 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 20:31:31] 2026-03-14 00:30:53,374 | INFO     | job 7044561876 has completed (purged errors)
[2026-03-13 20:31:31] 2026-03-14 00:30:53,374 | INFO     | overall cleanup function is called
[2026-03-13 20:31:31] 2026-03-14 00:30:53,732 | INFO     | PID=1894601 has CPU usage=13.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-13 20:31:31] 2026-03-14 00:30:53,732 | INFO     | .. there are 44 such processes running
[2026-03-13 20:31:31] 2026-03-14 00:30:54,396 | INFO     | --- collectZombieJob: --- 10, [1900989]
[2026-03-13 20:31:31] 2026-03-14 00:30:54,396 | INFO     | zombie collector waiting for pid 1900989
[2026-03-13 20:31:31] 2026-03-14 00:30:54,396 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 20:31:31] 2026-03-14 00:30:54,397 | INFO     | collected zombie processes
[2026-03-13 20:31:31] 2026-03-14 00:30:54,397 | INFO     | will attempt to kill all subprocesses of pid=1900989
[2026-03-13 20:31:31] 2026-03-14 00:30:56,123 | INFO     | process IDs to be killed: [1900989] (in reverse order)
[2026-03-13 20:31:31] 2026-03-14 00:30:56,418 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 20:31:31] 2026-03-14 00:30:56,486 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 20:31:31] 2026-03-14 00:30:56,547 | INFO     | did not find any defunct processes belonging to 1900989
[2026-03-13 20:31:31] 2026-03-14 00:30:56,628 | INFO     | did not find any defunct processes belonging to 1900989
[2026-03-13 20:31:31] 2026-03-14 00:30:56,628 | INFO     | ready for new job
[2026-03-13 20:31:31] 2026-03-14 00:30:56,628 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 20:31:31] 2026-03-14 00:30:56,653 | INFO     | **************************************
[2026-03-13 20:31:31] 2026-03-14 00:30:56,654 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 20:31:31] 2026-03-14 00:30:56,654 | INFO     | **************************************
[2026-03-13 20:31:31] 2026-03-14 00:30:56,654 | INFO     | 
[2026-03-13 20:31:31] 2026-03-14 00:30:56,681 | INFO     | architecture information:
[2026-03-13 20:31:31] 2026-03-14 00:30:56,712 | INFO     | executing command: cat /etc/os-release
[2026-03-13 20:31:31] 2026-03-14 00:30:56,857 | INFO     | cat /etc/os-release:
[2026-03-13 20:31:31] NAME="CentOS Linux"
[2026-03-13 20:31:31] VERSION="7 (Core)"
[2026-03-13 20:31:31] ID="centos"
[2026-03-13 20:31:31] ID_LIKE="rhel fedora"
[2026-03-13 20:31:31] VERSION_ID="7"
[2026-03-13 20:31:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 20:31:31] ANSI_COLOR="0;31"
[2026-03-13 20:31:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 20:31:31] HOME_URL="https://www.centos.org/"
[2026-03-13 20:31:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 20:31:31] 
[2026-03-13 20:31:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 20:31:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 20:31:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 20:31:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 20:31:31] 
[2026-03-13 20:31:31] 2026-03-14 00:30:56,857 | INFO     | **************************************
[2026-03-13 20:31:31] 2026-03-14 00:30:57,361 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-13 20:31:31] 2026-03-14 00:30:57,420 | INFO     | sufficient remaining disk space (92192899072 B)
[2026-03-13 20:31:31] 2026-03-14 00:30:57,420 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 20:31:31] 2026-03-14 00:30:57,420 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 20:31:31] 2026-03-14 00:30:57,420 | INFO     | update_server=False
[2026-03-13 20:31:31] 2026-03-14 00:30:57,420 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 20:31:31] 2026-03-14 00:30:57,731 | INFO     | all payload control threads have been joined
[2026-03-13 20:31:31] 2026-03-14 00:30:57,772 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 20:31:31] 2026-03-14 00:30:58,104 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 20:31:31] 2026-03-14 00:30:58,104 | INFO     | aborting loop
[2026-03-13 20:31:31] 2026-03-14 00:30:58,208 | INFO     | all data control threads have been joined
[2026-03-13 20:31:31] 2026-03-14 00:30:58,275 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 20:31:31] 2026-03-14 00:30:58,286 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 20:31:31] 2026-03-14 00:30:58,426 | INFO     | [job] retrieve thread has finished
[2026-03-13 20:31:31] 2026-03-14 00:30:58,439 | INFO     | all job control threads have been joined
[2026-03-13 20:31:31] 2026-03-14 00:30:58,681 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 20:31:31] 2026-03-14 00:30:58,737 | INFO     | [payload] control thread has finished
[2026-03-13 20:31:31] 2026-03-14 00:30:59,110 | INFO     | [job] job monitor thread has finished
[2026-03-13 20:31:31] 2026-03-14 00:30:59,200 | INFO     | [payload] validate_post thread has finished
[2026-03-13 20:31:31] 2026-03-14 00:30:59,214 | INFO     | [data] control thread has finished
[2026-03-13 20:31:31] 2026-03-14 00:30:59,294 | INFO     | [job] queue monitor thread has finished
[2026-03-13 20:31:31] 2026-03-14 00:30:59,406 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 20:31:31] 2026-03-14 00:30:59,434 | INFO     | [job] validate thread has finished
[2026-03-13 20:31:31] 2026-03-14 00:30:59,461 | INFO     | [job] control thread has finished
[2026-03-13 20:31:31] 2026-03-14 00:30:59,657 | INFO     | [data] copytool_in thread has finished
[2026-03-13 20:31:31] 2026-03-14 00:30:59,683 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 20:31:31] 2026-03-14 00:30:59,684 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 20:31:31] 2026-03-14 00:30:59,802 | INFO     | [payload] failed_post thread has finished
[2026-03-13 20:31:31] 2026-03-14 00:31:00,283 | INFO     | [data] copytool_out thread has finished
[2026-03-13 20:31:31] 2026-03-14 00:31:01,784 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 20:31:31] 2026-03-14 00:31:05,626 | INFO     | [monitor] cgroup control has ended
[2026-03-13 20:31:31] 2026-03-14 00:31:07,283 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139971759593280)>', '<ExcThread(monitor, started 139971407099648)>']
[2026-03-13 20:31:31] 2026-03-14 00:31:12,309 | INFO     | all workflow threads have been joined
[2026-03-13 20:31:31] 2026-03-14 00:31:12,309 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 20:31:31] 2026-03-14 00:31:12,310 | INFO     | traces error code: 0
[2026-03-13 20:31:31] 2026-03-14 00:31:12,310 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 20:31:31] 2026-03-14 00:31:29,068 | INFO     | PID=1894601 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-13 20:31:31] 2026-03-14 00:31:29,068 | INFO     | .. there are 44 such processes running
[2026-03-13 20:31:31] 2026-03-14 00:31:29,069 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 20:31:31] 2026-03-14 00:31:29,069 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 20:31:31] 2026-03-14 00:31:29,069 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 20:31:31] 2026-03-14 00:31:29,069 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 20:31:31] 2026-03-14 00:31:29,069 | INFO     | [monitor] control thread has ended
[2026-03-13 20:31:31] 2026-03-14 00:31:29,714 [wrapper] ==== pilot stdout END ====
[2026-03-13 20:31:31] 2026-03-14 00:31:29,748 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 20:31:31] 2026-03-14 00:31:29,797 [wrapper] pilotpid: 1894601
[2026-03-13 20:31:31] 2026-03-14 00:31:29,852 [wrapper] Pilot exit status: 0
[2026-03-13 20:31:31] 2026-03-14 00:31:30,009 [wrapper] pandaids: 7044561876
[2026-03-13 20:31:31] 2026-03-14 00:31:30,871 [wrapper] cleanup supervisor_pilot 2565976 1894602
[2026-03-13 20:31:31] 2026-03-14 00:31:30,896 [wrapper] Test setup, not cleaning
[2026-03-13 20:31:31] 2026-03-14 00:31:30,925 [wrapper] apfmon messages muted
[2026-03-13 20:31:31] 2026-03-14 00:31:30,980 [wrapper] ==== wrapper stdout END ====
[2026-03-13 20:31:31] 2026-03-14 00:31:31,008 [wrapper] ==== wrapper stderr END ====
[2026-03-13 20:31:31]  *** Error codes and diagnostics ***
[2026-03-13 20:31:31]     "exeErrorCode": 0,
[2026-03-13 20:31:31]     "exeErrorDiag": "",
[2026-03-13 20:31:31]     "pilotErrorCode": 0,
[2026-03-13 20:31:31]     "pilotErrorDiag": "",
[2026-03-13 20:31:31]  *** Listing of results directory ***
[2026-03-13 20:31:31] total 613484
[2026-03-13 20:31:31] -rw-r--r--. 1 boincer umatlas    602624 Mar 10 12:47 pilot3.tar.gz
[2026-03-13 20:31:31] -rw-r--r--. 1 boincer umatlas      5111 Mar 13 11:07 queuedata.json
[2026-03-13 20:31:31] -rwx------. 1 boincer umatlas     36322 Mar 13 11:07 runpilot2-wrapper.sh
[2026-03-13 20:31:31] -rw-r--r--. 1 boincer umatlas       100 Mar 13 16:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 20:31:31] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 13 16:53 run_atlas
[2026-03-13 20:31:31] -rw-r--r--. 1 boincer umatlas       105 Mar 13 16:53 job.xml
[2026-03-13 20:31:31] -rw-r--r--. 2 boincer umatlas 435577297 Mar 13 16:53 EVNT.46701403._002392.pool.root.1
[2026-03-13 20:31:31] -rw-r--r--. 2 boincer umatlas     15845 Mar 13 16:53 start_atlas.sh
[2026-03-13 20:31:31] drwxrwx--x. 2 boincer umatlas      4096 Mar 13 16:53 shared
[2026-03-13 20:31:31] -rw-r--r--. 2 boincer umatlas    616310 Mar 13 16:53 input.tar.gz
[2026-03-13 20:31:31] -rw-r--r--. 1 boincer umatlas         0 Mar 13 16:53 boinc_lockfile
[2026-03-13 20:31:31] -rw-r--r--. 1 boincer umatlas      2571 Mar 13 16:54 pandaJob.out
[2026-03-13 20:31:31] -rw-------. 1 boincer umatlas        57 Mar 13 16:54 setup.sh.local
[2026-03-13 20:31:31] -rw-------. 1 boincer umatlas   1006721 Mar 13 16:55 agis_schedconf.cvmfs.json
[2026-03-13 20:31:31] -rw-------. 1 boincer umatlas       444 Mar 13 16:55 workernode_map.json
[2026-03-13 20:31:31] drwx------. 7 boincer umatlas      4096 Mar 13 16:55 pilot3
[2026-03-13 20:31:31] -rw-r--r--. 1 boincer umatlas      6879 Mar 13 20:21 init_data.xml
[2026-03-13 20:31:31] -rw-------. 1 boincer umatlas 184646689 Mar 13 20:29 HITS.48955015._016863.pool.root.1
[2026-03-13 20:31:31] -rw-r--r--. 1 boincer umatlas       531 Mar 13 20:29 boinc_task_state.xml
[2026-03-13 20:31:31] -rw-------. 1 boincer umatlas      1043 Mar 13 20:30 memory_monitor_summary.json
[2026-03-13 20:31:31] -rw-------. 1 boincer umatlas   1511579 Mar 13 20:30 agis_ddmendpoints.agis.ALL.json
[2026-03-13 20:31:31] -rw-------. 1 boincer umatlas    422393 Mar 13 20:30 log.48955015._016863.job.log.tgz.1
[2026-03-13 20:31:31] -rw-------. 1 boincer umatlas      6403 Mar 13 20:30 heartbeat.json
[2026-03-13 20:31:31] -rw-r--r--. 1 boincer umatlas      8192 Mar 13 20:31 boinc_mmap_file
[2026-03-13 20:31:31] -rw-r--r--. 1 boincer umatlas        28 Mar 13 20:31 wrapper_checkpoint.txt
[2026-03-13 20:31:31] -rw-------. 1 boincer umatlas        95 Mar 13 20:31 pilot_heartbeat.json
[2026-03-13 20:31:31] -rw-------. 1 boincer umatlas       823 Mar 13 20:31 pilotlog.txt
[2026-03-13 20:31:31] -rw-------. 1 boincer umatlas   1578183 Mar 13 20:31 log.48955015._016863.job.log.1
[2026-03-13 20:31:31] -rw-------. 1 boincer umatlas       357 Mar 13 20:31 output.list
[2026-03-13 20:31:31] -rw-r--r--. 1 boincer umatlas       620 Mar 13 20:31 runtime_log
[2026-03-13 20:31:31] -rw-------. 1 boincer umatlas   2017280 Mar 13 20:31 result.tar.gz
[2026-03-13 20:31:31] -rw-r--r--. 1 boincer umatlas      9352 Mar 13 20:31 runtime_log.err
[2026-03-13 20:31:31] -rw-------. 1 boincer umatlas       657 Mar 13 20:31 hQpNDmHIJL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmJupLDmMVodHn.diag
[2026-03-13 20:31:31] -rw-r--r--. 1 boincer umatlas     21264 Mar 13 20:31 stderr.txt
[2026-03-13 20:31:31] HITS file was successfully produced:
[2026-03-13 20:31:31] -rw-------. 1 boincer umatlas 184646689 Mar 13 20:29 shared/HITS.pool.root.1
[2026-03-13 20:31:31]  *** Contents of shared directory: ***
[2026-03-13 20:31:31] total 608292
[2026-03-13 20:31:31] -rw-r--r--. 2 boincer umatlas 435577297 Mar 13 16:53 ATLAS.root_0
[2026-03-13 20:31:31] -rw-r--r--. 2 boincer umatlas     15845 Mar 13 16:53 start_atlas.sh
[2026-03-13 20:31:31] -rw-r--r--. 2 boincer umatlas    616310 Mar 13 16:53 input.tar.gz
[2026-03-13 20:31:31] -rw-------. 1 boincer umatlas 184646689 Mar 13 20:29 HITS.pool.root.1
[2026-03-13 20:31:31] -rw-------. 1 boincer umatlas   2017280 Mar 13 20:31 result.tar.gz
20:31:33 (1888731): run_atlas exited; CPU time 38963.206173
20:31:33 (1888731): called boinc_finish(0)

</stderr_txt>
]]>

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