Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:40:17 (10602): wrapper (7.7.26015): starting
09:40:17 (10602): wrapper: running run_atlas (--nthreads 8)
[2026-03-14 09:40:17] Arguments: --nthreads 8
[2026-03-14 09:40:17] Threads: 8
[2026-03-14 09:40:17] Checking for CVMFS
[2026-03-14 09:40:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 09:40:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 09:40:20] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 09:40:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 09:40:21] 2.11.2.0 24551 127346 110016 157271 0 53 15221543 25165824 4502 130560 161 38392871 99.834 26747328 902 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-14 09:40:21] CVMFS is ok
[2026-03-14 09:40:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 09:40:21] Checking for apptainer binary...
[2026-03-14 09:40:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 09:40:21] Running /usr/bin/apptainer --version
[2026-03-14 09:40:21] apptainer version 1.3.2-1.el7
[2026-03-14 09:40:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 09:40:31] cg-vwn415.simple-grid.lan
[2026-03-14 09:40:31] apptainer works
[2026-03-14 09:40:31] Set ATHENA_PROC_NUMBER=8
[2026-03-14 09:40:31] Set ATHENA_CORE_NUMBER=8
[2026-03-14 09:40:31] Starting ATLAS job with PandaID=7044562271
[2026-03-14 09:40:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 13:37:11]  *** The last 200 lines of the pilot log: ***
[2026-03-14 13:37:12] 2026-03-14 12:35:58,303 | INFO     | log transfer has been attempted: DONE
[2026-03-14 13:37:12] 2026-03-14 12:35:58,303 | INFO     | job 7044562271 has finished - writing final server update
[2026-03-14 13:37:12] 2026-03-14 12:35:58,303 | INFO     | total number of processed events: 400 (read)
[2026-03-14 13:37:12] 2026-03-14 12:35:58,305 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-7044562271/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 13:37:12] 2026-03-14 12:35:58,306 | INFO     | extracted standard info from prmon json
[2026-03-14 13:37:12] 2026-03-14 12:35:58,306 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 13:37:12] 2026-03-14 12:35:58,306 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 13:37:12] 2026-03-14 12:35:58,307 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 13:37:12] 2026-03-14 12:35:58,307 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 13:37:12] 2026-03-14 12:35:58,312 | INFO     | fitting pss+swap vs Time
[2026-03-14 13:37:12] 2026-03-14 12:35:58,312 | INFO     | sum of square deviations: 3438620752.0
[2026-03-14 13:37:12] 2026-03-14 12:35:58,314 | INFO     | sum of deviations: 77086758533.00002
[2026-03-14 13:37:12] 2026-03-14 12:35:58,314 | INFO     | mean x: 1773484963.0
[2026-03-14 13:37:12] 2026-03-14 12:35:58,315 | INFO     | mean y: 2425416.1704035876
[2026-03-14 13:37:12] 2026-03-14 12:35:58,315 | INFO     | intersect: -39755435937.15614
[2026-03-14 13:37:12] 2026-03-14 12:35:58,315 | INFO     | chi2: 7.1115344565771625
[2026-03-14 13:37:12] 2026-03-14 12:35:58,316 | INFO     | sum of square deviations: 3212467674.5
[2026-03-14 13:37:12] 2026-03-14 12:35:58,317 | INFO     | sum of deviations: 89774524811.5
[2026-03-14 13:37:12] 2026-03-14 12:35:58,318 | INFO     | mean x: 1773484810.5
[2026-03-14 13:37:12] 2026-03-14 12:35:58,318 | INFO     | mean y: 2433791.7935779816
[2026-03-14 13:37:12] 2026-03-14 12:35:58,318 | INFO     | intersect: -49558767208.565506
[2026-03-14 13:37:12] 2026-03-14 12:35:58,318 | INFO     | chi2: 6.409489635247646
[2026-03-14 13:37:12] 2026-03-14 12:35:58,318 | INFO     | current chi2=6.409489635247646 (change=9.87191759550886 %)
[2026-03-14 13:37:12] 2026-03-14 12:35:58,319 | INFO     | right removable region: 217
[2026-03-14 13:37:12] 2026-03-14 12:35:58,319 | INFO     | sum of square deviations: 3212467674.5
[2026-03-14 13:37:12] 2026-03-14 12:35:58,324 | INFO     | sum of deviations: 403838604.9999981
[2026-03-14 13:37:12] 2026-03-14 12:35:58,324 | INFO     | mean x: 1773485115.5
[2026-03-14 13:37:12] 2026-03-14 12:35:58,324 | INFO     | mean y: 2477081.0550458715
[2026-03-14 13:37:12] 2026-03-14 12:35:58,325 | INFO     | intersect: -220467342.85834113
[2026-03-14 13:37:12] 2026-03-14 12:35:58,325 | INFO     | chi2: 2.247573106587452
[2026-03-14 13:37:12] 2026-03-14 12:35:58,325 | INFO     | current chi2=2.247573106587452 (change=68.3953847047909 %)
[2026-03-14 13:37:12] 2026-03-14 12:35:58,326 | INFO     | sum of square deviations: 2996454322.0
[2026-03-14 13:37:12] 2026-03-14 12:35:58,327 | INFO     | sum of deviations: -35841917498.0
[2026-03-14 13:37:12] 2026-03-14 12:35:58,328 | INFO     | mean x: 1773485268.0
[2026-03-14 13:37:12] 2026-03-14 12:35:58,328 | INFO     | mean y: 2502489.9906103285
[2026-03-14 13:37:12] 2026-03-14 12:35:58,328 | INFO     | intersect: 21215945389.11264
[2026-03-14 13:37:12] 2026-03-14 12:35:58,328 | INFO     | chi2: 0.9211999366319694
[2026-03-14 13:37:12] 2026-03-14 12:35:58,329 | INFO     | current chi2=0.9211999366319694 (change=59.01357184191214 %)
[2026-03-14 13:37:12] 2026-03-14 12:35:58,329 | INFO     | sum of square deviations: 2790348132.0
[2026-03-14 13:37:12] 2026-03-14 12:35:58,331 | INFO     | sum of deviations: -31057190958.0
[2026-03-14 13:37:12] 2026-03-14 12:35:58,331 | INFO     | mean x: 1773485420.5
[2026-03-14 13:37:12] 2026-03-14 12:35:58,331 | INFO     | mean y: 2498918.1153846155
[2026-03-14 13:37:12] 2026-03-14 12:35:58,331 | INFO     | intersect: 19741783322.82472
[2026-03-14 13:37:12] 2026-03-14 12:35:58,332 | INFO     | chi2: 0.9039814411649598
[2026-03-14 13:37:12] 2026-03-14 12:35:58,332 | INFO     | current chi2=0.9039814411649598 (change=1.8691377172650194 %)
[2026-03-14 13:37:12] 2026-03-14 12:35:58,332 | INFO     | left removable region: 30
[2026-03-14 13:37:12] 2026-03-14 12:35:58,332 | INFO     | sum of square deviations: 2027639878.0
[2026-03-14 13:37:12] 2026-03-14 12:35:58,334 | INFO     | sum of deviations: 1842572404.9999998
[2026-03-14 13:37:12] 2026-03-14 12:35:58,334 | INFO     | mean x: 1773485695.0
[2026-03-14 13:37:12] 2026-03-14 12:35:58,334 | INFO     | mean y: 2493829.8181818184
[2026-03-14 13:37:12] 2026-03-14 12:35:58,334 | INFO     | intersect: -1609121643.7798603
[2026-03-14 13:37:12] 2026-03-14 12:35:58,334 | INFO     | chi2: 0.00013309938615119234
[2026-03-14 13:37:12] 2026-03-14 12:35:58,335 | INFO     | current memory leak: 0.91 B/s (using 187 data points, chi2=0.00)
[2026-03-14 13:37:12] 2026-03-14 12:35:58,335 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-03-14 13:37:12] 2026-03-14 12:35:58,335 | INFO     | ..............................
[2026-03-14 13:37:12] 2026-03-14 12:35:58,336 | INFO     | . Timing measurements:
[2026-03-14 13:37:12] 2026-03-14 12:35:58,336 | INFO     | . get job = 0 s
[2026-03-14 13:37:12] 2026-03-14 12:35:58,336 | INFO     | . initial setup = 95 s
[2026-03-14 13:37:12] 2026-03-14 12:35:58,336 | INFO     | . payload setup = 133 s
[2026-03-14 13:37:12] 2026-03-14 12:35:58,336 | INFO     | . stage-in = 0 s
[2026-03-14 13:37:12] 2026-03-14 12:35:58,336 | INFO     | . payload execution = 13662 s
[2026-03-14 13:37:12] 2026-03-14 12:35:58,336 | INFO     | . stage-out = 3 s
[2026-03-14 13:37:12] 2026-03-14 12:35:58,336 | INFO     | . log creation = 1 s
[2026-03-14 13:37:12] 2026-03-14 12:35:58,336 | INFO     | ..............................
[2026-03-14 13:37:12] 2026-03-14 12:35:58,482 | INFO     | 
[2026-03-14 13:37:12] 2026-03-14 12:35:58,483 | INFO     | job summary report
[2026-03-14 13:37:12] 2026-03-14 12:35:58,483 | INFO     | --------------------------------------------------
[2026-03-14 13:37:12] 2026-03-14 12:35:58,483 | INFO     | PanDA job id: 7044562271
[2026-03-14 13:37:12] 2026-03-14 12:35:58,483 | INFO     | task id: 48955015
[2026-03-14 13:37:12] 2026-03-14 12:35:58,483 | INFO     | errors: (none)
[2026-03-14 13:37:12] 2026-03-14 12:35:58,483 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 13:37:12] 2026-03-14 12:35:58,483 | INFO     | pilot state: finished 
[2026-03-14 13:37:12] 2026-03-14 12:35:58,484 | INFO     | transexitcode: 0
[2026-03-14 13:37:12] 2026-03-14 12:35:58,484 | INFO     | exeerrorcode: 0
[2026-03-14 13:37:12] 2026-03-14 12:35:58,484 | INFO     | exeerrordiag: 
[2026-03-14 13:37:12] 2026-03-14 12:35:58,484 | INFO     | exitcode: 0
[2026-03-14 13:37:12] 2026-03-14 12:35:58,484 | INFO     | exitmsg: OK
[2026-03-14 13:37:12] 2026-03-14 12:35:58,484 | INFO     | cpuconsumptiontime: 52676 s
[2026-03-14 13:37:12] 2026-03-14 12:35:58,484 | INFO     | nevents: 400
[2026-03-14 13:37:12] 2026-03-14 12:35:58,484 | INFO     | neventsw: 0
[2026-03-14 13:37:12] 2026-03-14 12:35:58,484 | INFO     | pid: 19121
[2026-03-14 13:37:12] 2026-03-14 12:35:58,485 | INFO     | pgrp: 19121
[2026-03-14 13:37:12] 2026-03-14 12:35:58,485 | INFO     | corecount: 8
[2026-03-14 13:37:12] 2026-03-14 12:35:58,485 | INFO     | event service: False
[2026-03-14 13:37:12] 2026-03-14 12:35:58,485 | INFO     | sizes: {0: 2279747, 1: 2280204, 2: 2280264, 12: 2280292, 13800: 2310556, 13804: 2319554, 13808: 2319738, 13809: 2319932}
[2026-03-14 13:37:12] 2026-03-14 12:35:58,485 | INFO     | --------------------------------------------------
[2026-03-14 13:37:12] 2026-03-14 12:35:58,485 | INFO     | 
[2026-03-14 13:37:12] 2026-03-14 12:35:58,485 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-03-14 13:37:12] 2026-03-14 12:35:58,884 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 13:37:12] 2026-03-14 12:35:58,885 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 13:37:12] 2026-03-14 12:35:58,885 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 13:37:12] 2026-03-14 12:35:58,885 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 13:37:12] 2026-03-14 12:35:58,885 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 13:37:12] 2026-03-14 12:35:58,885 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 13:37:12] 2026-03-14 12:35:58,885 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 13:37:12] 2026-03-14 12:35:58,885 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 13:37:12] 2026-03-14 12:35:58,885 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 13:37:12] 2026-03-14 12:35:58,885 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 13:37:12] 2026-03-14 12:35:58,886 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 13:37:12] 2026-03-14 12:35:58,886 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 13:37:12] 2026-03-14 12:35:58,886 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 13:37:12] 2026-03-14 12:35:58,886 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 13:37:12] 2026-03-14 12:35:58,886 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 13:37:12] 2026-03-14 12:35:58,886 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 13:37:12] 2026-03-14 12:35:58,886 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 13:37:12] 2026-03-14 12:35:58,886 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 13:37:12] 2026-03-14 12:35:58,886 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 13:37:12] 2026-03-14 12:35:58,886 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 13:37:12] 2026-03-14 12:35:58,887 | INFO     | job 7044562271 has completed (purged errors)
[2026-03-14 13:37:12] 2026-03-14 12:35:58,887 | INFO     | overall cleanup function is called
[2026-03-14 13:37:12] 2026-03-14 12:35:59,895 | INFO     | --- collectZombieJob: --- 10, [19121]
[2026-03-14 13:37:12] 2026-03-14 12:35:59,896 | INFO     | zombie collector waiting for pid 19121
[2026-03-14 13:37:12] 2026-03-14 12:35:59,896 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 13:37:12] 2026-03-14 12:35:59,896 | INFO     | collected zombie processes
[2026-03-14 13:37:12] 2026-03-14 12:35:59,896 | INFO     | will attempt to kill all subprocesses of pid=19121
[2026-03-14 13:37:12] 2026-03-14 12:35:59,991 | INFO     | process IDs to be killed: [19121] (in reverse order)
[2026-03-14 13:37:12] 2026-03-14 12:36:00,080 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 13:37:12] 2026-03-14 12:36:00,080 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 13:37:12] 2026-03-14 12:36:00,084 | INFO     | did not find any defunct processes belonging to 19121
[2026-03-14 13:37:12] 2026-03-14 12:36:00,087 | INFO     | did not find any defunct processes belonging to 19121
[2026-03-14 13:37:12] 2026-03-14 12:36:00,087 | INFO     | ready for new job
[2026-03-14 13:37:12] 2026-03-14 12:36:00,087 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 13:37:12] 2026-03-14 12:36:00,089 | INFO     | **************************************
[2026-03-14 13:37:12] 2026-03-14 12:36:00,089 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 13:37:12] 2026-03-14 12:36:00,090 | INFO     | **************************************
[2026-03-14 13:37:12] 2026-03-14 12:36:00,090 | INFO     | 
[2026-03-14 13:37:12] 2026-03-14 12:36:00,090 | INFO     | pilot is running in a VM
[2026-03-14 13:37:12] 2026-03-14 12:36:00,090 | INFO     | architecture information:
[2026-03-14 13:37:12] 2026-03-14 12:36:00,093 | INFO     | executing command: cat /etc/os-release
[2026-03-14 13:37:12] 2026-03-14 12:36:00,309 | INFO     | cat /etc/os-release:
[2026-03-14 13:37:12] NAME="CentOS Linux"
[2026-03-14 13:37:12] VERSION="7 (Core)"
[2026-03-14 13:37:12] ID="centos"
[2026-03-14 13:37:12] ID_LIKE="rhel fedora"
[2026-03-14 13:37:12] VERSION_ID="7"
[2026-03-14 13:37:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 13:37:12] ANSI_COLOR="0;31"
[2026-03-14 13:37:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 13:37:12] HOME_URL="https://www.centos.org/"
[2026-03-14 13:37:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 13:37:12] 
[2026-03-14 13:37:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 13:37:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 13:37:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 13:37:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 13:37:12] 
[2026-03-14 13:37:12] 2026-03-14 12:36:00,309 | INFO     | **************************************
[2026-03-14 13:37:12] 2026-03-14 12:36:00,813 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-03-14 13:37:12] 2026-03-14 12:36:01,077 | INFO     | sufficient remaining disk space (495245590528 B)
[2026-03-14 13:37:12] 2026-03-14 12:36:01,077 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 13:37:12] 2026-03-14 12:36:01,078 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 13:37:12] 2026-03-14 12:36:01,078 | INFO     | update_server=False
[2026-03-14 13:37:12] 2026-03-14 12:36:01,078 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 13:37:12] 2026-03-14 12:36:01,117 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 13:37:12] 2026-03-14 12:36:01,118 | INFO     | aborting loop
[2026-03-14 13:37:12] 2026-03-14 12:36:01,802 | INFO     | all data control threads have been joined
[2026-03-14 13:37:12] 2026-03-14 12:36:01,843 | INFO     | all job control threads have been joined
[2026-03-14 13:37:12] 2026-03-14 12:36:01,864 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 13:37:12] 2026-03-14 12:36:02,084 | INFO     | [job] retrieve thread has finished
[2026-03-14 13:37:12] 2026-03-14 12:36:02,109 | INFO     | [payload] validate_post thread has finished
[2026-03-14 13:37:12] 2026-03-14 12:36:02,124 | INFO     | [job] job monitor thread has finished
[2026-03-14 13:37:12] 2026-03-14 12:36:02,396 | INFO     | all payload control threads have been joined
[2026-03-14 13:37:12] 2026-03-14 12:36:02,759 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 13:37:12] 2026-03-14 12:36:02,803 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 13:37:12] 2026-03-14 12:36:02,809 | INFO     | [data] control thread has finished
[2026-03-14 13:37:12] 2026-03-14 12:36:02,825 | INFO     | [job] validate thread has finished
[2026-03-14 13:37:12] 2026-03-14 12:36:02,850 | INFO     | [job] control thread has finished
[2026-03-14 13:37:12] 2026-03-14 12:36:03,263 | INFO     | [data] copytool_in thread has finished
[2026-03-14 13:37:12] 2026-03-14 12:36:03,264 | INFO     | [payload] failed_post thread has finished
[2026-03-14 13:37:12] 2026-03-14 12:36:03,382 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 13:37:12] 2026-03-14 12:36:03,403 | INFO     | [payload] control thread has finished
[2026-03-14 13:37:12] 2026-03-14 12:36:03,414 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 13:37:12] 2026-03-14 12:36:03,414 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 13:37:12] 2026-03-14 12:36:03,497 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 13:37:12] 2026-03-14 12:36:03,872 | INFO     | [data] copytool_out thread has finished
[2026-03-14 13:37:12] 2026-03-14 12:36:04,503 | INFO     | [job] queue monitor thread has finished
[2026-03-14 13:37:12] 2026-03-14 12:36:07,391 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 13:37:12] 2026-03-14 12:36:31,273 | INFO     | PID=14656 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-14 13:37:12] 2026-03-14 12:36:31,273 | INFO     | .. there are 9 such processes running
[2026-03-14 13:37:12] 2026-03-14 12:36:31,274 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 13:37:12] 2026-03-14 12:36:31,274 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 13:37:12] 2026-03-14 12:36:31,274 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 13:37:12] 2026-03-14 12:37:00,646 | INFO     | [monitor] cgroup control has ended
[2026-03-14 13:37:12] 2026-03-14 12:37:02,358 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139729720088384)>', '<ExcThread(monitor, started 139729286711040)>']
[2026-03-14 13:37:12] 2026-03-14 12:37:02,465 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 13:37:12] 2026-03-14 12:37:02,466 | INFO     | [monitor] control thread has ended
[2026-03-14 13:37:12] 2026-03-14 12:37:07,383 | INFO     | all workflow threads have been joined
[2026-03-14 13:37:12] 2026-03-14 12:37:07,384 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 13:37:12] 2026-03-14 12:37:07,384 | INFO     | traces error code: 0
[2026-03-14 13:37:12] 2026-03-14 12:37:07,384 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 13:37:12] 2026-03-14 12:37:07,771 [wrapper] ==== pilot stdout END ====
[2026-03-14 13:37:12] 2026-03-14 12:37:07,884 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 13:37:12] 2026-03-14 12:37:07,985 [wrapper] pilotpid: 14656
[2026-03-14 13:37:12] 2026-03-14 12:37:08,080 [wrapper] Pilot exit status: 0
[2026-03-14 13:37:12] 2026-03-14 12:37:08,666 [wrapper] pandaids: 7044562271
[2026-03-14 13:37:12] 2026-03-14 12:37:08,965 [wrapper] cleanup supervisor_pilot 26844 14657
[2026-03-14 13:37:12] 2026-03-14 12:37:09,084 [wrapper] Test setup, not cleaning
[2026-03-14 13:37:12] 2026-03-14 12:37:09,190 [wrapper] apfmon messages muted
[2026-03-14 13:37:12] 2026-03-14 12:37:09,304 [wrapper] ==== wrapper stdout END ====
[2026-03-14 13:37:12] 2026-03-14 12:37:09,434 [wrapper] ==== wrapper stderr END ====
[2026-03-14 13:37:12]  *** Error codes and diagnostics ***
[2026-03-14 13:37:12]     "exeErrorCode": 0,
[2026-03-14 13:37:12]     "exeErrorDiag": "",
[2026-03-14 13:37:12]     "pilotErrorCode": 0,
[2026-03-14 13:37:12]     "pilotErrorDiag": "",
[2026-03-14 13:37:12]  *** Listing of results directory ***
[2026-03-14 13:37:12] total 625792
[2026-03-14 13:37:12] -rw-r--r--. 1 boinc boinc    585013 Mar 13 16:07 pilot3.tar.gz
[2026-03-14 13:37:12] -rwx------. 1 boinc boinc     36322 Mar 13 16:07 runpilot2-wrapper.sh
[2026-03-14 13:37:12] -rw-r--r--. 1 boinc boinc      5111 Mar 13 16:08 queuedata.json
[2026-03-14 13:37:12] -rw-r--r--. 1 boinc boinc       100 Mar 14 09:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 13:37:12] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 09:40 run_atlas
[2026-03-14 13:37:12] -rw-r--r--. 1 boinc boinc       105 Mar 14 09:40 job.xml
[2026-03-14 13:37:12] -rw-r--r--. 2 boinc boinc 444543147 Mar 14 09:40 EVNT.46701403._002398.pool.root.1
[2026-03-14 13:37:12] -rw-r--r--. 2 boinc boinc    597537 Mar 14 09:40 input.tar.gz
[2026-03-14 13:37:12] -rw-r--r--. 1 boinc boinc      6391 Mar 14 09:40 init_data.xml
[2026-03-14 13:37:12] -rw-r--r--. 2 boinc boinc     15845 Mar 14 09:40 start_atlas.sh
[2026-03-14 13:37:12] drwxrwx--x. 2 boinc boinc        68 Mar 14 09:40 shared
[2026-03-14 13:37:12] -rw-r--r--. 1 boinc boinc         0 Mar 14 09:40 boinc_lockfile
[2026-03-14 13:37:12] -rw-r--r--. 1 boinc boinc      2571 Mar 14 09:40 pandaJob.out
[2026-03-14 13:37:12] -rw-------. 1 boinc boinc       415 Mar 14 09:45 workernode_map.json
[2026-03-14 13:37:12] -rw-------. 1 boinc boinc   1004579 Mar 14 09:45 agis_schedconf.cvmfs.json
[2026-03-14 13:37:12] drwx------. 5 boinc boinc      4096 Mar 14 09:45 pilot3
[2026-03-14 13:37:12] -rw-------. 1 boinc boinc 187586154 Mar 14 13:34 HITS.48955015._017169.pool.root.1
[2026-03-14 13:37:12] -rw-r--r--. 1 boinc boinc       531 Mar 14 13:34 boinc_task_state.xml
[2026-03-14 13:37:12] -rw-------. 1 boinc boinc      1014 Mar 14 13:35 memory_monitor_summary.json
[2026-03-14 13:37:12] -rw-------. 1 boinc boinc   1511579 Mar 14 13:35 agis_ddmendpoints.agis.ALL.json
[2026-03-14 13:37:12] -rw-------. 1 boinc boinc    454476 Mar 14 13:35 log.48955015._017169.job.log.tgz.1
[2026-03-14 13:37:12] -rw-------. 1 boinc boinc      6320 Mar 14 13:35 heartbeat.json
[2026-03-14 13:37:12] -rw-------. 1 boinc boinc        95 Mar 14 13:36 pilot_heartbeat.json
[2026-03-14 13:37:12] -rw-------. 1 boinc boinc      4880 Mar 14 13:37 pilotlog.txt
[2026-03-14 13:37:12] -rw-r--r--. 1 boinc boinc      8192 Mar 14 13:37 boinc_mmap_file
[2026-03-14 13:37:12] -rw-r--r--. 1 boinc boinc        28 Mar 14 13:37 wrapper_checkpoint.txt
[2026-03-14 13:37:12] -rw-------. 1 boinc boinc   1925388 Mar 14 13:37 log.48955015._017169.job.log.1
[2026-03-14 13:37:12] -rw-------. 1 boinc boinc       357 Mar 14 13:37 output.list
[2026-03-14 13:37:12] -rw-r--r--. 1 boinc boinc       620 Mar 14 13:37 runtime_log
[2026-03-14 13:37:12] -rw-------. 1 boinc boinc   2396160 Mar 14 13:37 result.tar.gz
[2026-03-14 13:37:12] -rw-r--r--. 1 boinc boinc      8816 Mar 14 13:37 runtime_log.err
[2026-03-14 13:37:12] -rw-------. 1 boinc boinc       655 Mar 14 13:37 7WcMDmRIJL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmjupLDmjjs09n.diag
[2026-03-14 13:37:12] -rw-r--r--. 1 boinc boinc     20707 Mar 14 13:37 stderr.txt
[2026-03-14 13:37:12] HITS file was successfully produced:
[2026-03-14 13:37:12] -rw-------. 1 boinc boinc 187586154 Mar 14 13:34 shared/HITS.pool.root.1
[2026-03-14 13:37:12]  *** Contents of shared directory: ***
[2026-03-14 13:37:12] total 620260
[2026-03-14 13:37:12] -rw-r--r--. 2 boinc boinc 444543147 Mar 14 09:40 ATLAS.root_0
[2026-03-14 13:37:12] -rw-r--r--. 2 boinc boinc    597537 Mar 14 09:40 input.tar.gz
[2026-03-14 13:37:12] -rw-r--r--. 2 boinc boinc     15845 Mar 14 09:40 start_atlas.sh
[2026-03-14 13:37:12] -rw-------. 1 boinc boinc 187586154 Mar 14 13:34 HITS.pool.root.1
[2026-03-14 13:37:12] -rw-------. 1 boinc boinc   2396160 Mar 14 13:37 result.tar.gz
13:37:13 (10602): run_atlas exited; CPU time 52896.681631
13:37:13 (10602): called boinc_finish(0)

</stderr_txt>
]]>

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