Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:32 (553094): wrapper (7.7.26015): starting
00:01:32 (553094): wrapper: running run_atlas (--nthreads 8)
[2026-03-14 00:01:32] Arguments: --nthreads 8
[2026-03-14 00:01:32] Threads: 8
[2026-03-14 00:01:32] Checking for CVMFS
[2026-03-14 00:01:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 00:01:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 00:01:32] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 00:01:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 00:01:32] 2.13.3.0 8702 184925 643100 157263 1 224 10842491 21042176 21650 16776704 0 663468201 99.425 923693157 32460 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-14 00:01:32] CVMFS is ok
[2026-03-14 00:01:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 00:01:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 00:01:32] Further information can be found at the LHC@home message board.
[2026-03-14 00:01:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 00:01:32] Checking for apptainer binary...
[2026-03-14 00:01:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 00:01:32] Running /usr/bin/apptainer --version
[2026-03-14 00:01:32] apptainer version 1.4.5-2.el9
[2026-03-14 00:01:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 00:01:33] c-16-12.aglt2.org
[2026-03-14 00:01:33] apptainer works
[2026-03-14 00:01:33] Set ATHENA_PROC_NUMBER=8
[2026-03-14 00:01:33] Set ATHENA_CORE_NUMBER=8
[2026-03-14 00:01:33] Starting ATLAS job with PandaID=7044894033
[2026-03-14 00:01:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 18:45:52]  *** The last 200 lines of the pilot log: ***
[2026-03-15 18:45:52] 2026-03-15 22:41:40,559 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 18:45:52] 2026-03-15 22:41:40,559 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 18:45:52] 2026-03-15 22:41:40,560 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 18:45:52] 2026-03-15 22:41:40,560 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 18:45:52] 2026-03-15 22:41:40,618 | INFO     | fitting pss+swap vs Time
[2026-03-15 18:45:52] 2026-03-15 22:41:40,622 | INFO     | sum of square deviations: 4926744468831.645
[2026-03-15 18:45:52] 2026-03-15 22:41:41,245 | INFO     | sum of deviations: 3657056141077.1665
[2026-03-15 18:45:52] 2026-03-15 22:41:41,246 | INFO     | mean x: 1773537835.59109
[2026-03-15 18:45:52] 2026-03-15 22:41:41,246 | INFO     | mean y: 2490865.614956245
[2026-03-15 18:45:52] 2026-03-15 22:41:41,246 | INFO     | intersect: -1313982410.8282223
[2026-03-15 18:45:52] 2026-03-15 22:41:41,253 | INFO     | chi2: 6.2007279988623125
[2026-03-15 18:45:52] 2026-03-15 22:41:41,261 | INFO     | sum of square deviations: 4897406922798.175
[2026-03-15 18:45:52] 2026-03-15 22:41:41,846 | INFO     | sum of deviations: 3804135993170.675
[2026-03-15 18:45:52] 2026-03-15 22:41:41,847 | INFO     | mean x: 1773537683.0932643
[2026-03-15 18:45:52] 2026-03-15 22:41:41,847 | INFO     | mean y: 2491628.809087286
[2026-03-15 18:45:52] 2026-03-15 22:41:41,847 | INFO     | intersect: -1375130986.9658713
[2026-03-15 18:45:52] 2026-03-15 22:41:41,854 | INFO     | chi2: 5.508954613311883
[2026-03-15 18:45:52] 2026-03-15 22:41:41,854 | INFO     | current chi2=5.508954613311883 (change=11.15632528434328 %)
[2026-03-15 18:45:52] 2026-03-15 22:41:41,854 | INFO     | right removable region: 2508
[2026-03-15 18:45:52] 2026-03-15 22:41:41,857 | INFO     | sum of square deviations: 4897405402679.359
[2026-03-15 18:45:52] 2026-03-15 22:41:42,242 | INFO     | sum of deviations: 2858023412588.5776
[2026-03-15 18:45:52] 2026-03-15 22:41:42,243 | INFO     | mean x: 1773537988.0928657
[2026-03-15 18:45:52] 2026-03-15 22:41:42,243 | INFO     | mean y: 2495018.328019131
[2026-03-15 18:45:52] 2026-03-15 22:41:42,243 | INFO     | intersect: -1032504675.6551492
[2026-03-15 18:45:52] 2026-03-15 22:41:42,297 | INFO     | chi2: 2.62780761345583
[2026-03-15 18:45:52] 2026-03-15 22:41:42,297 | INFO     | current chi2=2.62780761345583 (change=57.62098234371882 %)
[2026-03-15 18:45:52] 2026-03-15 22:41:42,305 | INFO     | sum of square deviations: 4868183648466.324
[2026-03-15 18:45:52] 2026-03-15 22:41:42,647 | INFO     | sum of deviations: 2367388862270.544
[2026-03-15 18:45:52] 2026-03-15 22:41:42,647 | INFO     | mean x: 1773538140.5930512
[2026-03-15 18:45:52] 2026-03-15 22:41:42,647 | INFO     | mean y: 2497578.1006389777
[2026-03-15 18:45:52] 2026-03-15 22:41:42,648 | INFO     | intersect: -859970796.9728335
[2026-03-15 18:45:52] 2026-03-15 22:41:42,655 | INFO     | chi2: 1.2484838198753754
[2026-03-15 18:45:52] 2026-03-15 22:41:42,655 | INFO     | current chi2=1.2484838198753754 (change=52.4895272590563 %)
[2026-03-15 18:45:52] 2026-03-15 22:41:42,662 | INFO     | sum of square deviations: 4839078361917.272
[2026-03-15 18:45:52] 2026-03-15 22:41:42,900 | INFO     | monitor loop #4640: job 0:7044894033 is in state 'finished'
[2026-03-15 18:45:52] 2026-03-15 22:41:42,900 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-15 18:45:52] 2026-03-15 22:41:43,024 | INFO     | sum of deviations: 2121458987357.4438
[2026-03-15 18:45:52] 2026-03-15 22:41:43,024 | INFO     | mean x: 1773538293.0932374
[2026-03-15 18:45:52] 2026-03-15 22:41:43,025 | INFO     | mean y: 2498866.594637855
[2026-03-15 18:45:52] 2026-03-15 22:41:43,025 | INFO     | intersect: -775022898.895952
[2026-03-15 18:45:52] 2026-03-15 22:41:43,028 | INFO     | chi2: 0.9409799441500557
[2026-03-15 18:45:52] 2026-03-15 22:41:43,028 | INFO     | current chi2=0.9409799441500557 (change=24.63018509571193 %)
[2026-03-15 18:45:52] 2026-03-15 22:41:43,028 | INFO     | left removable region: 30
[2026-03-15 18:45:52] 2026-03-15 22:41:43,031 | INFO     | sum of square deviations: 4718104872649.777
[2026-03-15 18:45:52] 2026-03-15 22:41:43,465 | INFO     | sum of deviations: 1934278318477.0542
[2026-03-15 18:45:52] 2026-03-15 22:41:43,465 | INFO     | mean x: 1773538567.5936239
[2026-03-15 18:45:52] 2026-03-15 22:41:43,465 | INFO     | mean y: 2501411.8898305083
[2026-03-15 18:45:52] 2026-03-15 22:41:43,465 | INFO     | intersect: -724595015.7808318
[2026-03-15 18:45:52] 2026-03-15 22:41:43,472 | INFO     | chi2: 0.03490217438336746
[2026-03-15 18:45:52] 2026-03-15 22:41:43,473 | INFO     | current memory leak: 0.41 B/s (using 2478 data points, chi2=0.03)
[2026-03-15 18:45:52] 2026-03-15 22:41:43,515 | INFO     | could have reported an average CPU frequency of 2899 MHz (88 samples)
[2026-03-15 18:45:52] 2026-03-15 22:41:43,515 | INFO     | ..............................
[2026-03-15 18:45:52] 2026-03-15 22:41:43,515 | INFO     | . Timing measurements:
[2026-03-15 18:45:52] 2026-03-15 22:41:43,516 | INFO     | . get job = 1 s
[2026-03-15 18:45:52] 2026-03-15 22:41:43,516 | INFO     | . initial setup = 61 s
[2026-03-15 18:45:52] 2026-03-15 22:41:43,516 | INFO     | . payload setup = 70 s
[2026-03-15 18:45:52] 2026-03-15 22:41:43,516 | INFO     | . stage-in = 5 s
[2026-03-15 18:45:52] 2026-03-15 22:41:43,516 | INFO     | . payload execution = 153348 s
[2026-03-15 18:45:52] 2026-03-15 22:41:43,517 | INFO     | . stage-out = 4 s
[2026-03-15 18:45:52] 2026-03-15 22:41:43,517 | INFO     | . log creation = 0 s
[2026-03-15 18:45:52] 2026-03-15 22:41:43,517 | INFO     | ..............................
[2026-03-15 18:45:52] 2026-03-15 22:41:43,743 | INFO     | PID=558832 has CPU usage=27.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 18:45:52] 2026-03-15 22:41:43,743 | INFO     | .. there are 40 such processes running
[2026-03-15 18:45:52] 2026-03-15 22:41:43,890 | INFO     | 
[2026-03-15 18:45:52] 2026-03-15 22:41:43,891 | INFO     | job summary report
[2026-03-15 18:45:52] 2026-03-15 22:41:43,891 | INFO     | --------------------------------------------------
[2026-03-15 18:45:52] 2026-03-15 22:41:43,891 | INFO     | PanDA job id: 7044894033
[2026-03-15 18:45:52] 2026-03-15 22:41:43,892 | INFO     | task id: 48955015
[2026-03-15 18:45:52] 2026-03-15 22:41:43,892 | INFO     | errors: (none)
[2026-03-15 18:45:52] 2026-03-15 22:41:43,892 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 18:45:52] 2026-03-15 22:41:43,892 | INFO     | pilot state: finished 
[2026-03-15 18:45:52] 2026-03-15 22:41:43,892 | INFO     | transexitcode: 0
[2026-03-15 18:45:52] 2026-03-15 22:41:43,892 | INFO     | exeerrorcode: 0
[2026-03-15 18:45:52] 2026-03-15 22:41:43,892 | INFO     | exeerrordiag: 
[2026-03-15 18:45:52] 2026-03-15 22:41:43,893 | INFO     | exitcode: 0
[2026-03-15 18:45:52] 2026-03-15 22:41:43,893 | INFO     | exitmsg: OK
[2026-03-15 18:45:52] 2026-03-15 22:41:43,893 | INFO     | cpuconsumptiontime: 70257 s
[2026-03-15 18:45:52] 2026-03-15 22:41:43,893 | INFO     | nevents: 400
[2026-03-15 18:45:52] 2026-03-15 22:41:43,893 | INFO     | neventsw: 0
[2026-03-15 18:45:52] 2026-03-15 22:41:43,893 | INFO     | pid: 577203
[2026-03-15 18:45:52] 2026-03-15 22:41:43,893 | INFO     | pgrp: 577203
[2026-03-15 18:45:52] 2026-03-15 22:41:43,894 | INFO     | corecount: 8
[2026-03-15 18:45:52] 2026-03-15 22:41:43,894 | INFO     | event service: False
[2026-03-15 18:45:52] 2026-03-15 22:41:43,894 | INFO     | sizes: {0: 2279146, 1: 2279747, 2: 2279831, 3: 2279859, 4: 2279887, 9: 2237779, 14: 2280504, 16: 2280532, 153424: 2362242, 153430: 2371240, 153431: 2371296, 153436
[2026-03-15 18:45:52] 2026-03-15 22:41:43,894 | INFO     | --------------------------------------------------
[2026-03-15 18:45:52] 2026-03-15 22:41:43,894 | INFO     | 
[2026-03-15 18:45:52] 2026-03-15 22:41:43,894 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-15 18:45:52] 2026-03-15 22:41:43,922 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 18:45:52] 2026-03-15 22:41:43,923 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 18:45:52] 2026-03-15 22:41:43,923 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 18:45:52] 2026-03-15 22:41:43,923 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 18:45:52] 2026-03-15 22:41:43,923 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 18:45:52] 2026-03-15 22:41:43,924 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 18:45:52] 2026-03-15 22:41:43,924 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 18:45:52] 2026-03-15 22:41:43,924 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 18:45:52] 2026-03-15 22:41:43,924 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 18:45:52] 2026-03-15 22:41:43,924 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 18:45:52] 2026-03-15 22:41:43,924 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 18:45:52] 2026-03-15 22:41:43,924 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 18:45:52] 2026-03-15 22:41:43,925 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 18:45:52] 2026-03-15 22:41:43,925 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 18:45:52] 2026-03-15 22:41:43,925 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 18:45:52] 2026-03-15 22:41:43,925 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 18:45:52] 2026-03-15 22:41:43,925 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 18:45:52] 2026-03-15 22:41:43,925 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 18:45:52] 2026-03-15 22:41:43,926 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 18:45:52] 2026-03-15 22:41:43,926 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 18:45:52] 2026-03-15 22:41:43,926 | INFO     | job 7044894033 has completed (purged errors)
[2026-03-15 18:45:52] 2026-03-15 22:41:43,926 | INFO     | overall cleanup function is called
[2026-03-15 18:45:52] 2026-03-15 22:41:44,937 | INFO     | --- collectZombieJob: --- 10, [577203]
[2026-03-15 18:45:52] 2026-03-15 22:41:44,937 | INFO     | zombie collector waiting for pid 577203
[2026-03-15 18:45:52] 2026-03-15 22:41:44,937 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 18:45:52] 2026-03-15 22:41:44,937 | INFO     | collected zombie processes
[2026-03-15 18:45:52] 2026-03-15 22:41:44,938 | INFO     | will attempt to kill all subprocesses of pid=577203
[2026-03-15 18:45:52] 2026-03-15 22:41:46,362 | INFO     | process IDs to be killed: [577203] (in reverse order)
[2026-03-15 18:45:52] 2026-03-15 22:41:46,769 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 18:45:52] 2026-03-15 22:41:46,769 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 18:45:52] 2026-03-15 22:41:46,801 | INFO     | did not find any defunct processes belonging to 577203
[2026-03-15 18:45:52] 2026-03-15 22:41:46,834 | INFO     | did not find any defunct processes belonging to 577203
[2026-03-15 18:45:52] 2026-03-15 22:41:46,835 | INFO     | ready for new job
[2026-03-15 18:45:52] 2026-03-15 22:41:46,835 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 18:45:52] 2026-03-15 22:41:46,862 | INFO     | **************************************
[2026-03-15 18:45:52] 2026-03-15 22:41:46,862 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 18:45:52] 2026-03-15 22:41:46,862 | INFO     | **************************************
[2026-03-15 18:45:52] 2026-03-15 22:41:46,863 | INFO     | 
[2026-03-15 18:45:52] 2026-03-15 22:41:46,877 | INFO     | architecture information:
[2026-03-15 18:45:52] 2026-03-15 22:41:46,881 | INFO     | executing command: cat /etc/os-release
[2026-03-15 18:45:52] 2026-03-15 22:41:46,952 | INFO     | cat /etc/os-release:
[2026-03-15 18:45:52] NAME="CentOS Linux"
[2026-03-15 18:45:52] VERSION="7 (Core)"
[2026-03-15 18:45:52] ID="centos"
[2026-03-15 18:45:52] ID_LIKE="rhel fedora"
[2026-03-15 18:45:52] VERSION_ID="7"
[2026-03-15 18:45:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 18:45:52] ANSI_COLOR="0;31"
[2026-03-15 18:45:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 18:45:52] HOME_URL="https://www.centos.org/"
[2026-03-15 18:45:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 18:45:52] 
[2026-03-15 18:45:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 18:45:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 18:45:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 18:45:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 18:45:52] 
[2026-03-15 18:45:52] 2026-03-15 22:41:46,953 | INFO     | **************************************
[2026-03-15 18:45:52] 2026-03-15 22:41:47,456 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-15 18:45:52] 2026-03-15 22:41:47,487 | INFO     | sufficient remaining disk space (50018123776 B)
[2026-03-15 18:45:52] 2026-03-15 22:41:47,487 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 18:45:52] 2026-03-15 22:41:47,487 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 18:45:52] 2026-03-15 22:41:47,488 | INFO     | update_server=False
[2026-03-15 18:45:52] 2026-03-15 22:41:47,488 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 18:45:52] 2026-03-15 22:41:47,834 | INFO     | all job control threads have been joined
[2026-03-15 18:45:52] 2026-03-15 22:41:47,924 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-15 18:45:52] 2026-03-15 22:41:47,924 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-15 18:45:52] 2026-03-15 22:41:47,925 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 18:45:52] 2026-03-15 22:41:47,925 | INFO     | will abort loop
[2026-03-15 18:45:52] 2026-03-15 22:41:48,493 | INFO     | [job] retrieve thread has finished
[2026-03-15 18:45:52] 2026-03-15 22:41:48,533 | INFO     | all data control threads have been joined
[2026-03-15 18:45:52] 2026-03-15 22:41:48,547 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 18:45:52] 2026-03-15 22:41:48,738 | INFO     | all payload control threads have been joined
[2026-03-15 18:45:52] 2026-03-15 22:41:48,754 | INFO     | [payload] failed_post thread has finished
[2026-03-15 18:45:52] 2026-03-15 22:41:48,842 | INFO     | [job] control thread has finished
[2026-03-15 18:45:52] 2026-03-15 22:41:48,852 | INFO     | [job] validate thread has finished
[2026-03-15 18:45:52] 2026-03-15 22:41:48,887 | INFO     | [data] copytool_in thread has finished
[2026-03-15 18:45:52] 2026-03-15 22:41:48,914 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 18:45:52] 2026-03-15 22:41:48,930 | INFO     | [job] job monitor thread has finished
[2026-03-15 18:45:52] 2026-03-15 22:41:49,383 | INFO     | [payload] validate_post thread has finished
[2026-03-15 18:45:52] 2026-03-15 22:41:49,526 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 18:45:52] 2026-03-15 22:41:49,548 | INFO     | [data] control thread has finished
[2026-03-15 18:45:52] 2026-03-15 22:41:49,671 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 18:45:52] 2026-03-15 22:41:49,689 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 18:45:52] 2026-03-15 22:41:49,744 | INFO     | [payload] control thread has finished
[2026-03-15 18:45:52] 2026-03-15 22:41:49,813 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 18:45:52] 2026-03-15 22:41:49,920 | INFO     | [job] queue monitor thread has finished
[2026-03-15 18:45:52] 2026-03-15 22:41:49,978 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 18:45:52] 2026-03-15 22:41:50,556 | INFO     | [data] copytool_out thread has finished
[2026-03-15 18:45:52] 2026-03-15 22:41:53,987 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 18:45:52] 2026-03-15 22:41:55,176 | INFO     | [monitor] cgroup control has ended
[2026-03-15 18:45:52] 2026-03-15 22:41:56,752 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140137918736192)>', '<ExcThread(monitor, started 140137115670272)>']
[2026-03-15 18:45:52] 2026-03-15 22:42:01,778 | INFO     | all workflow threads have been joined
[2026-03-15 18:45:52] 2026-03-15 22:42:01,778 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 18:45:52] 2026-03-15 22:42:01,778 | INFO     | traces error code: 0
[2026-03-15 18:45:52] 2026-03-15 22:42:01,779 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 18:45:52] 2026-03-15 22:42:17,128 | INFO     | PID=558832 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-15 18:45:52] 2026-03-15 22:42:17,128 | INFO     | .. there are 40 such processes running
[2026-03-15 18:45:52] 2026-03-15 22:42:17,129 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 18:45:52] 2026-03-15 22:42:17,129 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 18:45:52] 2026-03-15 22:42:17,129 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 18:45:52] 2026-03-15 22:42:17,129 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 18:45:52] 2026-03-15 22:42:17,130 | INFO     | [monitor] control thread has ended
[2026-03-15 18:45:52] 2026-03-15 22:42:17,273 [wrapper] ==== pilot stdout END ====
[2026-03-15 18:45:52] 2026-03-15 22:42:17,276 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 18:45:52] 2026-03-15 22:42:17,278 [wrapper] pilotpid: 558832
[2026-03-15 18:45:52] 2026-03-15 22:42:17,281 [wrapper] Pilot exit status: 0
[2026-03-15 18:45:52] 2026-03-15 22:42:17,305 [wrapper] pandaids: 7044894033
[2026-03-15 18:45:52] 2026-03-15 22:42:17,427 [wrapper] cleanup supervisor_pilot 1656548 558833
[2026-03-15 18:45:52] 2026-03-15 22:42:17,430 [wrapper] Test setup, not cleaning
[2026-03-15 18:45:52] 2026-03-15 22:42:17,440 [wrapper] apfmon messages muted
[2026-03-15 18:45:52] 2026-03-15 22:42:17,470 [wrapper] ==== wrapper stdout END ====
[2026-03-15 18:45:52] 2026-03-15 22:42:17,477 [wrapper] ==== wrapper stderr END ====
[2026-03-15 18:45:52]  *** Error codes and diagnostics ***
[2026-03-15 18:45:52]     "exeErrorCode": 0,
[2026-03-15 18:45:52]     "exeErrorDiag": "",
[2026-03-15 18:45:52]     "pilotErrorCode": 0,
[2026-03-15 18:45:52]     "pilotErrorDiag": "",
[2026-03-15 18:45:52]  *** Listing of results directory ***
[2026-03-15 18:45:52] total 645972
[2026-03-15 18:45:52] -rw-r--r--. 1 boincer umatlas    585013 Mar 13 14:59 pilot3.tar.gz
[2026-03-15 18:45:52] -rwx------. 1 boincer umatlas     36322 Mar 13 15:04 runpilot2-wrapper.sh
[2026-03-15 18:45:52] -rw-r--r--. 1 boincer umatlas      5111 Mar 13 15:04 queuedata.json
[2026-03-15 18:45:52] -rw-r--r--. 1 boincer umatlas       100 Mar 14 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 18:45:52] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 14 00:01 run_atlas
[2026-03-15 18:45:52] -rw-r--r--. 1 boincer umatlas       105 Mar 14 00:01 job.xml
[2026-03-15 18:45:52] -rw-r--r--. 2 boincer umatlas 441174968 Mar 14 00:01 EVNT.46701403._002448.pool.root.1
[2026-03-15 18:45:52] -rw-r--r--. 2 boincer umatlas     15845 Mar 14 00:01 start_atlas.sh
[2026-03-15 18:45:52] drwxrwx--x. 2 boincer umatlas      4096 Mar 14 00:01 shared
[2026-03-15 18:45:52] -rw-r--r--. 2 boincer umatlas    597535 Mar 14 00:01 input.tar.gz
[2026-03-15 18:45:52] -rw-r--r--. 1 boincer umatlas         0 Mar 14 00:01 boinc_lockfile
[2026-03-15 18:45:52] -rw-r--r--. 1 boincer umatlas      2571 Mar 14 00:01 pandaJob.out
[2026-03-15 18:45:52] -rw-------. 1 boincer umatlas        57 Mar 14 00:01 setup.sh.local
[2026-03-15 18:45:52] -rw-------. 1 boincer umatlas       441 Mar 14 00:04 workernode_map.json
[2026-03-15 18:45:52] -rw-------. 1 boincer umatlas   1004579 Mar 14 00:04 agis_schedconf.cvmfs.json
[2026-03-15 18:45:52] drwx------. 5 boincer umatlas      4096 Mar 14 00:04 pilot3
[2026-03-15 18:45:52] -rw-r--r--. 1 boincer umatlas      6522 Mar 15 12:21 init_data.xml
[2026-03-15 18:45:52] -rw-------. 1 boincer umatlas 188398766 Mar 15 18:40 HITS.48955015._019631.pool.root.1
[2026-03-15 18:45:52] -rw-r--r--. 1 boincer umatlas       531 Mar 15 18:40 boinc_task_state.xml
[2026-03-15 18:45:52] -rw-------. 1 boincer umatlas      1051 Mar 15 18:41 memory_monitor_summary.json
[2026-03-15 18:45:52] -rw-------. 1 boincer umatlas   1511579 Mar 15 18:41 agis_ddmendpoints.agis.ALL.json
[2026-03-15 18:45:52] -rw-------. 1 boincer umatlas   1700741 Mar 15 18:41 log.48955015._019631.job.log.tgz.1
[2026-03-15 18:45:52] -rw-------. 1 boincer umatlas      6390 Mar 15 18:41 heartbeat.json
[2026-03-15 18:45:52] -rw-------. 1 boincer umatlas       822 Mar 15 18:42 pilotlog.txt
[2026-03-15 18:45:52] -rw-------. 1 boincer umatlas        95 Mar 15 18:42 pilot_heartbeat.json
[2026-03-15 18:45:52] -rw-------. 1 boincer umatlas  12281286 Mar 15 18:42 log.48955015._019631.job.log.1
[2026-03-15 18:45:52] -rw-------. 1 boincer umatlas       357 Mar 15 18:42 output.list
[2026-03-15 18:45:52] -rw-r--r--. 1 boincer umatlas       620 Mar 15 18:42 runtime_log
[2026-03-15 18:45:52] -rw-------. 1 boincer umatlas  13998080 Mar 15 18:42 result.tar.gz
[2026-03-15 18:45:52] -rw-------. 1 boincer umatlas       659 Mar 15 18:42 t3MODmtyML9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm0cqLDmbsdbQn.diag
[2026-03-15 18:45:52] -rw-r--r--. 1 boincer umatlas      9338 Mar 15 18:42 runtime_log.err
[2026-03-15 18:45:52] -rw-r--r--. 1 boincer umatlas        28 Mar 15 18:45 wrapper_checkpoint.txt
[2026-03-15 18:45:52] -rw-r--r--. 1 boincer umatlas      8192 Mar 15 18:45 boinc_mmap_file
[2026-03-15 18:45:52] -rw-r--r--. 1 boincer umatlas     21280 Mar 15 18:45 stderr.txt
[2026-03-15 18:45:52] HITS file was successfully produced:
[2026-03-15 18:45:52] -rw-------. 1 boincer umatlas 188398766 Mar 15 18:40 shared/HITS.pool.root.1
[2026-03-15 18:45:52]  *** Contents of shared directory: ***
[2026-03-15 18:45:52] total 629100
[2026-03-15 18:45:52] -rw-r--r--. 2 boincer umatlas 441174968 Mar 14 00:01 ATLAS.root_0
[2026-03-15 18:45:52] -rw-r--r--. 2 boincer umatlas     15845 Mar 14 00:01 start_atlas.sh
[2026-03-15 18:45:52] -rw-r--r--. 2 boincer umatlas    597535 Mar 14 00:01 input.tar.gz
[2026-03-15 18:45:52] -rw-------. 1 boincer umatlas 188398766 Mar 15 18:40 HITS.pool.root.1
[2026-03-15 18:45:52] -rw-------. 1 boincer umatlas  13998080 Mar 15 18:42 result.tar.gz
18:45:53 (553094): run_atlas exited; CPU time 76878.115319
18:45:53 (553094): called boinc_finish(0)

</stderr_txt>
]]>

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