Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:37:17 (27027): wrapper (7.7.26015): starting
13:37:17 (27027): wrapper: running run_atlas (--nthreads 8)
[2026-03-14 13:37:17] Arguments: --nthreads 8
[2026-03-14 13:37:17] Threads: 8
[2026-03-14 13:37:17] Checking for CVMFS
[2026-03-14 13:37:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 13:37:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 13:37:21] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 13:37:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 13:37:22] 2.11.2.0 24551 127583 109752 157278 3 54 15255860 25165824 4502 130560 161 38446684 99.834 26756901 902 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-14 13:37:22] CVMFS is ok
[2026-03-14 13:37:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 13:37:22] Checking for apptainer binary...
[2026-03-14 13:37:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 13:37:22] Running /usr/bin/apptainer --version
[2026-03-14 13:37:22] apptainer version 1.3.2-1.el7
[2026-03-14 13:37:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 13:37:45] cg-vwn415.simple-grid.lan
[2026-03-14 13:37:45] apptainer works
[2026-03-14 13:37:45] Set ATHENA_PROC_NUMBER=8
[2026-03-14 13:37:45] Set ATHENA_CORE_NUMBER=8
[2026-03-14 13:37:46] Starting ATLAS job with PandaID=7044842484
[2026-03-14 13:37:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 17:31:50]  *** The last 200 lines of the pilot log: ***
[2026-03-14 17:31:50] 2026-03-14 16:30:42,271 | INFO     | total number of processed events: 400 (read)
[2026-03-14 17:31:50] 2026-03-14 16:30:42,273 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-7044842484/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 17:31:50] 2026-03-14 16:30:42,274 | INFO     | extracted standard info from prmon json
[2026-03-14 17:31:50] 2026-03-14 16:30:42,274 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 17:31:50] 2026-03-14 16:30:42,274 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 17:31:50] 2026-03-14 16:30:42,274 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 17:31:50] 2026-03-14 16:30:42,275 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 17:31:50] 2026-03-14 16:30:42,279 | INFO     | fitting pss+swap vs Time
[2026-03-14 17:31:50] 2026-03-14 16:30:42,280 | INFO     | sum of square deviations: 3301699115.0
[2026-03-14 17:31:50] 2026-03-14 16:30:42,282 | INFO     | sum of deviations: 92062165202.99997
[2026-03-14 17:31:50] 2026-03-14 16:30:42,282 | INFO     | mean x: 1773499126.5
[2026-03-14 17:31:50] 2026-03-14 16:30:42,282 | INFO     | mean y: 2419408.3
[2026-03-14 17:31:50] 2026-03-14 16:30:42,282 | INFO     | intersect: -49448534141.48133
[2026-03-14 17:31:50] 2026-03-14 16:30:42,282 | INFO     | chi2: 7.267040448351679
[2026-03-14 17:31:50] 2026-03-14 16:30:42,283 | INFO     | sum of square deviations: 3081657780.0
[2026-03-14 17:31:50] 2026-03-14 16:30:42,285 | INFO     | sum of deviations: 104253781058.0
[2026-03-14 17:31:50] 2026-03-14 16:30:42,285 | INFO     | mean x: 1773498974.0
[2026-03-14 17:31:50] 2026-03-14 16:30:42,285 | INFO     | mean y: 2427672.227906977
[2026-03-14 17:31:50] 2026-03-14 16:30:42,285 | INFO     | intersect: -59995789826.79097
[2026-03-14 17:31:50] 2026-03-14 16:30:42,285 | INFO     | chi2: 6.565675357180832
[2026-03-14 17:31:50] 2026-03-14 16:30:42,286 | INFO     | current chi2=6.565675357180832 (change=9.651316738300688 %)
[2026-03-14 17:31:50] 2026-03-14 16:30:42,286 | INFO     | right removable region: 214
[2026-03-14 17:31:50] 2026-03-14 16:30:42,286 | INFO     | sum of square deviations: 3081657780.0
[2026-03-14 17:31:50] 2026-03-14 16:30:42,290 | INFO     | sum of deviations: 16645698116.999996
[2026-03-14 17:31:50] 2026-03-14 16:30:42,290 | INFO     | mean x: 1773499279.0
[2026-03-14 17:31:50] 2026-03-14 16:30:42,290 | INFO     | mean y: 2471640.506976744
[2026-03-14 17:31:50] 2026-03-14 16:30:42,291 | INFO     | intersect: -9577155857.570097
[2026-03-14 17:31:50] 2026-03-14 16:30:42,291 | INFO     | chi2: 2.4160929318163475
[2026-03-14 17:31:50] 2026-03-14 16:30:42,291 | INFO     | current chi2=2.4160929318163475 (change=66.75272486801185 %)
[2026-03-14 17:31:50] 2026-03-14 16:30:42,292 | INFO     | sum of square deviations: 2871616632.5
[2026-03-14 17:31:50] 2026-03-14 16:30:42,293 | INFO     | sum of deviations: -22167590076.0
[2026-03-14 17:31:50] 2026-03-14 16:30:42,293 | INFO     | mean x: 1773499431.5
[2026-03-14 17:31:50] 2026-03-14 16:30:42,293 | INFO     | mean y: 2499633.0
[2026-03-14 17:31:50] 2026-03-14 16:30:42,294 | INFO     | intersect: 13693118343.229609
[2026-03-14 17:31:50] 2026-03-14 16:30:42,294 | INFO     | chi2: 0.893935838526768
[2026-03-14 17:31:50] 2026-03-14 16:30:42,294 | INFO     | current chi2=0.893935838526768 (change=63.00076761307631 %)
[2026-03-14 17:31:50] 2026-03-14 16:30:42,295 | INFO     | sum of square deviations: 2671343110.0
[2026-03-14 17:31:50] 2026-03-14 16:30:42,296 | INFO     | sum of deviations: -25788139668.0
[2026-03-14 17:31:50] 2026-03-14 16:30:42,296 | INFO     | mean x: 1773499584.0
[2026-03-14 17:31:50] 2026-03-14 16:30:42,296 | INFO     | mean y: 2502371.975609756
[2026-03-14 17:31:50] 2026-03-14 16:30:42,296 | INFO     | intersect: 17123198999.123554
[2026-03-14 17:31:50] 2026-03-14 16:30:42,297 | INFO     | chi2: 0.8718346411630848
[2026-03-14 17:31:50] 2026-03-14 16:30:42,297 | INFO     | current chi2=0.8718346411630848 (change=2.4723471653297304 %)
[2026-03-14 17:31:50] 2026-03-14 16:30:42,297 | INFO     | left removable region: 30
[2026-03-14 17:31:50] 2026-03-14 16:30:42,298 | INFO     | sum of square deviations: 1931608310.0
[2026-03-14 17:31:50] 2026-03-14 16:30:42,299 | INFO     | sum of deviations: 2667292039.0000014
[2026-03-14 17:31:50] 2026-03-14 16:30:42,299 | INFO     | mean x: 1773499858.5
[2026-03-14 17:31:50] 2026-03-14 16:30:42,299 | INFO     | mean y: 2500715.6195652173
[2026-03-14 17:31:50] 2026-03-14 16:30:42,299 | INFO     | intersect: -2446464754.892766
[2026-03-14 17:31:50] 2026-03-14 16:30:42,300 | INFO     | chi2: 0.0003591694867697265
[2026-03-14 17:31:50] 2026-03-14 16:30:42,300 | INFO     | current memory leak: 1.38 B/s (using 184 data points, chi2=0.00)
[2026-03-14 17:31:50] 2026-03-14 16:30:42,300 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-03-14 17:31:50] 2026-03-14 16:30:42,301 | INFO     | ..............................
[2026-03-14 17:31:50] 2026-03-14 16:30:42,301 | INFO     | . Timing measurements:
[2026-03-14 17:31:50] 2026-03-14 16:30:42,301 | INFO     | . get job = 0 s
[2026-03-14 17:31:50] 2026-03-14 16:30:42,301 | INFO     | . initial setup = 100 s
[2026-03-14 17:31:50] 2026-03-14 16:30:42,301 | INFO     | . payload setup = 122 s
[2026-03-14 17:31:50] 2026-03-14 16:30:42,301 | INFO     | . stage-in = 0 s
[2026-03-14 17:31:50] 2026-03-14 16:30:42,301 | INFO     | . payload execution = 13497 s
[2026-03-14 17:31:50] 2026-03-14 16:30:42,301 | INFO     | . stage-out = 3 s
[2026-03-14 17:31:50] 2026-03-14 16:30:42,301 | INFO     | . log creation = 1 s
[2026-03-14 17:31:50] 2026-03-14 16:30:42,301 | INFO     | ..............................
[2026-03-14 17:31:50] 2026-03-14 16:30:42,429 | INFO     | 
[2026-03-14 17:31:50] 2026-03-14 16:30:42,429 | INFO     | job summary report
[2026-03-14 17:31:50] 2026-03-14 16:30:42,429 | INFO     | --------------------------------------------------
[2026-03-14 17:31:50] 2026-03-14 16:30:42,429 | INFO     | PanDA job id: 7044842484
[2026-03-14 17:31:50] 2026-03-14 16:30:42,429 | INFO     | task id: 48955015
[2026-03-14 17:31:50] 2026-03-14 16:30:42,429 | INFO     | errors: (none)
[2026-03-14 17:31:50] 2026-03-14 16:30:42,430 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 17:31:50] 2026-03-14 16:30:42,430 | INFO     | pilot state: finished 
[2026-03-14 17:31:50] 2026-03-14 16:30:42,430 | INFO     | transexitcode: 0
[2026-03-14 17:31:50] 2026-03-14 16:30:42,430 | INFO     | exeerrorcode: 0
[2026-03-14 17:31:50] 2026-03-14 16:30:42,430 | INFO     | exeerrordiag: 
[2026-03-14 17:31:50] 2026-03-14 16:30:42,430 | INFO     | exitcode: 0
[2026-03-14 17:31:50] 2026-03-14 16:30:42,430 | INFO     | exitmsg: OK
[2026-03-14 17:31:50] 2026-03-14 16:30:42,430 | INFO     | cpuconsumptiontime: 51009 s
[2026-03-14 17:31:50] 2026-03-14 16:30:42,430 | INFO     | nevents: 400
[2026-03-14 17:31:50] 2026-03-14 16:30:42,430 | INFO     | neventsw: 0
[2026-03-14 17:31:50] 2026-03-14 16:30:42,430 | INFO     | pid: 3360
[2026-03-14 17:31:50] 2026-03-14 16:30:42,431 | INFO     | pgrp: 3360
[2026-03-14 17:31:50] 2026-03-14 16:30:42,431 | INFO     | corecount: 8
[2026-03-14 17:31:50] 2026-03-14 16:30:42,431 | INFO     | event service: False
[2026-03-14 17:31:50] 2026-03-14 16:30:42,431 | INFO     | sizes: {0: 2279749, 1: 2280206, 2: 2280294, 13: 2280294, 13623: 2310531, 13624: 2310530, 13628: 2319712, 13631: 2319768, 13633: 2319962}
[2026-03-14 17:31:50] 2026-03-14 16:30:42,431 | INFO     | --------------------------------------------------
[2026-03-14 17:31:50] 2026-03-14 16:30:42,431 | INFO     | 
[2026-03-14 17:31:50] 2026-03-14 16:30:42,431 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-03-14 17:31:50] 2026-03-14 16:30:42,638 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 17:31:50] 2026-03-14 16:30:42,638 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 17:31:50] 2026-03-14 16:30:42,638 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 17:31:50] 2026-03-14 16:30:42,639 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 17:31:50] 2026-03-14 16:30:42,639 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 17:31:50] 2026-03-14 16:30:42,639 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 17:31:50] 2026-03-14 16:30:42,639 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 17:31:50] 2026-03-14 16:30:42,639 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 17:31:50] 2026-03-14 16:30:42,639 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 17:31:50] 2026-03-14 16:30:42,639 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 17:31:50] 2026-03-14 16:30:42,639 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 17:31:50] 2026-03-14 16:30:42,639 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 17:31:50] 2026-03-14 16:30:42,640 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 17:31:50] 2026-03-14 16:30:42,640 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 17:31:50] 2026-03-14 16:30:42,640 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 17:31:50] 2026-03-14 16:30:42,640 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 17:31:50] 2026-03-14 16:30:42,640 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 17:31:50] 2026-03-14 16:30:42,640 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 17:31:50] 2026-03-14 16:30:42,640 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 17:31:50] 2026-03-14 16:30:42,640 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 17:31:50] 2026-03-14 16:30:42,641 | INFO     | job 7044842484 has completed (purged errors)
[2026-03-14 17:31:50] 2026-03-14 16:30:42,641 | INFO     | overall cleanup function is called
[2026-03-14 17:31:50] 2026-03-14 16:30:43,649 | INFO     | --- collectZombieJob: --- 10, [3360]
[2026-03-14 17:31:50] 2026-03-14 16:30:43,650 | INFO     | zombie collector waiting for pid 3360
[2026-03-14 17:31:50] 2026-03-14 16:30:43,650 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 17:31:50] 2026-03-14 16:30:43,650 | INFO     | collected zombie processes
[2026-03-14 17:31:50] 2026-03-14 16:30:43,650 | INFO     | will attempt to kill all subprocesses of pid=3360
[2026-03-14 17:31:50] 2026-03-14 16:30:43,763 | INFO     | process IDs to be killed: [3360] (in reverse order)
[2026-03-14 17:31:50] 2026-03-14 16:30:44,683 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 17:31:50] 2026-03-14 16:30:44,684 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 17:31:50] 2026-03-14 16:30:44,687 | INFO     | did not find any defunct processes belonging to 3360
[2026-03-14 17:31:50] 2026-03-14 16:30:44,690 | INFO     | did not find any defunct processes belonging to 3360
[2026-03-14 17:31:50] 2026-03-14 16:30:44,690 | INFO     | ready for new job
[2026-03-14 17:31:50] 2026-03-14 16:30:44,691 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 17:31:50] 2026-03-14 16:30:44,693 | INFO     | **************************************
[2026-03-14 17:31:50] 2026-03-14 16:30:44,693 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 17:31:50] 2026-03-14 16:30:44,693 | INFO     | **************************************
[2026-03-14 17:31:50] 2026-03-14 16:30:44,693 | INFO     | 
[2026-03-14 17:31:50] 2026-03-14 16:30:44,697 | INFO     | pilot is running in a VM
[2026-03-14 17:31:50] 2026-03-14 16:30:44,697 | INFO     | architecture information:
[2026-03-14 17:31:50] 2026-03-14 16:30:44,707 | INFO     | executing command: cat /etc/os-release
[2026-03-14 17:31:50] 2026-03-14 16:30:44,894 | INFO     | cat /etc/os-release:
[2026-03-14 17:31:50] NAME="CentOS Linux"
[2026-03-14 17:31:50] VERSION="7 (Core)"
[2026-03-14 17:31:50] ID="centos"
[2026-03-14 17:31:50] ID_LIKE="rhel fedora"
[2026-03-14 17:31:50] VERSION_ID="7"
[2026-03-14 17:31:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 17:31:50] ANSI_COLOR="0;31"
[2026-03-14 17:31:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 17:31:50] HOME_URL="https://www.centos.org/"
[2026-03-14 17:31:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 17:31:50] 
[2026-03-14 17:31:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 17:31:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 17:31:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 17:31:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 17:31:50] 
[2026-03-14 17:31:50] 2026-03-14 16:30:44,894 | INFO     | **************************************
[2026-03-14 17:31:50] 2026-03-14 16:30:45,397 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-03-14 17:31:50] 2026-03-14 16:30:45,647 | INFO     | sufficient remaining disk space (495229861888 B)
[2026-03-14 17:31:50] 2026-03-14 16:30:45,647 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 17:31:50] 2026-03-14 16:30:45,648 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 17:31:50] 2026-03-14 16:30:45,648 | INFO     | update_server=False
[2026-03-14 17:31:50] 2026-03-14 16:30:45,648 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 17:31:50] 2026-03-14 16:30:45,675 | INFO     | all data control threads have been joined
[2026-03-14 17:31:50] 2026-03-14 16:30:45,830 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 17:31:50] 2026-03-14 16:30:46,009 | INFO     | all job control threads have been joined
[2026-03-14 17:31:50] 2026-03-14 16:30:46,092 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-14 17:31:50] 2026-03-14 16:30:46,093 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-14 17:31:50] 2026-03-14 16:30:46,093 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 17:31:50] 2026-03-14 16:30:46,093 | INFO     | will abort loop
[2026-03-14 17:31:50] 2026-03-14 16:30:46,360 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 17:31:50] 2026-03-14 16:30:46,471 | INFO     | all payload control threads have been joined
[2026-03-14 17:31:50] 2026-03-14 16:30:46,654 | INFO     | [job] retrieve thread has finished
[2026-03-14 17:31:50] 2026-03-14 16:30:46,682 | INFO     | [data] control thread has finished
[2026-03-14 17:31:50] 2026-03-14 16:30:47,011 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 17:31:50] 2026-03-14 16:30:47,016 | INFO     | [job] control thread has finished
[2026-03-14 17:31:50] 2026-03-14 16:30:47,051 | INFO     | [job] validate thread has finished
[2026-03-14 17:31:50] 2026-03-14 16:30:47,099 | INFO     | [job] job monitor thread has finished
[2026-03-14 17:31:50] 2026-03-14 16:30:47,130 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 17:31:50] 2026-03-14 16:30:47,448 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 17:31:50] 2026-03-14 16:30:47,478 | INFO     | [payload] control thread has finished
[2026-03-14 17:31:50] 2026-03-14 16:30:47,618 | INFO     | [data] copytool_in thread has finished
[2026-03-14 17:31:50] 2026-03-14 16:30:47,761 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 17:31:50] 2026-03-14 16:30:47,838 | INFO     | [data] copytool_out thread has finished
[2026-03-14 17:31:50] 2026-03-14 16:30:47,838 | INFO     | [payload] validate_post thread has finished
[2026-03-14 17:31:50] 2026-03-14 16:30:47,846 | INFO     | [payload] failed_post thread has finished
[2026-03-14 17:31:50] 2026-03-14 16:30:48,007 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 17:31:50] 2026-03-14 16:30:48,453 | INFO     | [job] queue monitor thread has finished
[2026-03-14 17:31:50] 2026-03-14 16:30:50,371 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 17:31:50] 2026-03-14 16:31:14,734 | INFO     | PID=31291 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-14 17:31:50] 2026-03-14 16:31:14,734 | INFO     | .. there are 9 such processes running
[2026-03-14 17:31:50] 2026-03-14 16:31:14,734 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 17:31:50] 2026-03-14 16:31:14,734 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 17:31:50] 2026-03-14 16:31:14,734 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 17:31:50] 2026-03-14 16:31:39,353 | INFO     | [monitor] cgroup control has ended
[2026-03-14 17:31:50] 2026-03-14 16:31:40,361 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140714701580096)>', '<ExcThread(monitor, started 140714109290240)>']
[2026-03-14 17:31:50] 2026-03-14 16:31:40,886 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 17:31:50] 2026-03-14 16:31:40,887 | INFO     | [monitor] control thread has ended
[2026-03-14 17:31:50] 2026-03-14 16:31:45,385 | INFO     | all workflow threads have been joined
[2026-03-14 17:31:50] 2026-03-14 16:31:45,386 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 17:31:50] 2026-03-14 16:31:45,386 | INFO     | traces error code: 0
[2026-03-14 17:31:50] 2026-03-14 16:31:45,386 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 17:31:50] 2026-03-14 16:31:45,821 [wrapper] ==== pilot stdout END ====
[2026-03-14 17:31:50] 2026-03-14 16:31:45,885 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 17:31:50] 2026-03-14 16:31:45,986 [wrapper] pilotpid: 31291
[2026-03-14 17:31:50] 2026-03-14 16:31:46,085 [wrapper] Pilot exit status: 0
[2026-03-14 17:31:50] 2026-03-14 16:31:46,548 [wrapper] pandaids: 7044842484
[2026-03-14 17:31:50] 2026-03-14 16:31:47,407 [wrapper] cleanup supervisor_pilot 10689 31292
[2026-03-14 17:31:50] 2026-03-14 16:31:47,551 [wrapper] Test setup, not cleaning
[2026-03-14 17:31:50] 2026-03-14 16:31:47,654 [wrapper] apfmon messages muted
[2026-03-14 17:31:50] 2026-03-14 16:31:47,738 [wrapper] ==== wrapper stdout END ====
[2026-03-14 17:31:50] 2026-03-14 16:31:47,804 [wrapper] ==== wrapper stderr END ====
[2026-03-14 17:31:50]  *** Error codes and diagnostics ***
[2026-03-14 17:31:50]     "exeErrorCode": 0,
[2026-03-14 17:31:50]     "exeErrorDiag": "",
[2026-03-14 17:31:50]     "pilotErrorCode": 0,
[2026-03-14 17:31:50]     "pilotErrorDiag": "",
[2026-03-14 17:31:50]  *** Listing of results directory ***
[2026-03-14 17:31:50] total 622504
[2026-03-14 17:31:50] -rw-r--r--. 1 boinc boinc    585013 Mar 13 19:59 pilot3.tar.gz
[2026-03-14 17:31:50] -rwx------. 1 boinc boinc     36322 Mar 13 20:02 runpilot2-wrapper.sh
[2026-03-14 17:31:50] -rw-r--r--. 1 boinc boinc      5111 Mar 13 20:03 queuedata.json
[2026-03-14 17:31:50] -rw-r--r--. 1 boinc boinc       100 Mar 14 13:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 17:31:50] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 13:37 run_atlas
[2026-03-14 17:31:50] -rw-r--r--. 1 boinc boinc       105 Mar 14 13:37 job.xml
[2026-03-14 17:31:50] -rw-r--r--. 1 boinc boinc      6391 Mar 14 13:37 init_data.xml
[2026-03-14 17:31:50] -rw-r--r--. 2 boinc boinc 442121121 Mar 14 13:37 EVNT.46701403._002431.pool.root.1
[2026-03-14 17:31:50] -rw-r--r--. 2 boinc boinc     15845 Mar 14 13:37 start_atlas.sh
[2026-03-14 17:31:50] drwxrwx--x. 2 boinc boinc        68 Mar 14 13:37 shared
[2026-03-14 17:31:50] -rw-r--r--. 2 boinc boinc    597519 Mar 14 13:37 input.tar.gz
[2026-03-14 17:31:50] -rw-r--r--. 1 boinc boinc         0 Mar 14 13:37 boinc_lockfile
[2026-03-14 17:31:50] -rw-r--r--. 1 boinc boinc      2572 Mar 14 13:37 pandaJob.out
[2026-03-14 17:31:50] -rw-------. 1 boinc boinc       415 Mar 14 13:43 workernode_map.json
[2026-03-14 17:31:50] -rw-------. 1 boinc boinc   1004579 Mar 14 13:43 agis_schedconf.cvmfs.json
[2026-03-14 17:31:50] drwx------. 5 boinc boinc      4096 Mar 14 13:43 pilot3
[2026-03-14 17:31:50] -rw-------. 1 boinc boinc 186621978 Mar 14 17:29 HITS.48955015._018796.pool.root.1
[2026-03-14 17:31:50] -rw-r--r--. 1 boinc boinc       531 Mar 14 17:29 boinc_task_state.xml
[2026-03-14 17:31:50] -rw-------. 1 boinc boinc      1013 Mar 14 17:30 memory_monitor_summary.json
[2026-03-14 17:31:50] -rw-------. 1 boinc boinc   1511579 Mar 14 17:30 agis_ddmendpoints.agis.ALL.json
[2026-03-14 17:31:50] -rw-------. 1 boinc boinc    481438 Mar 14 17:30 log.48955015._018796.job.log.tgz.1
[2026-03-14 17:31:50] -rw-------. 1 boinc boinc        95 Mar 14 17:30 pilot_heartbeat.json
[2026-03-14 17:31:50] -rw-------. 1 boinc boinc      6319 Mar 14 17:30 heartbeat.json
[2026-03-14 17:31:50] -rw-r--r--. 1 boinc boinc      8192 Mar 14 17:31 boinc_mmap_file
[2026-03-14 17:31:50] -rw-r--r--. 1 boinc boinc        28 Mar 14 17:31 wrapper_checkpoint.txt
[2026-03-14 17:31:50] -rw-------. 1 boinc boinc      5066 Mar 14 17:31 pilotlog.txt
[2026-03-14 17:31:50] -rw-------. 1 boinc boinc   1907317 Mar 14 17:31 log.48955015._018796.job.log.1
[2026-03-14 17:31:50] -rw-------. 1 boinc boinc       357 Mar 14 17:31 output.list
[2026-03-14 17:31:50] -rw-r--r--. 1 boinc boinc       620 Mar 14 17:31 runtime_log
[2026-03-14 17:31:50] -rw-------. 1 boinc boinc   2406400 Mar 14 17:31 result.tar.gz
[2026-03-14 17:31:50] -rw-r--r--. 1 boinc boinc      8816 Mar 14 17:31 runtime_log.err
[2026-03-14 17:31:50] -rw-------. 1 boinc boinc       655 Mar 14 17:31 lKKMDmgxML9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmYYqLDm41UrNn.diag
[2026-03-14 17:31:50] -rw-r--r--. 1 boinc boinc     20712 Mar 14 17:31 stderr.txt
[2026-03-14 17:31:50] HITS file was successfully produced:
[2026-03-14 17:31:50] -rw-------. 1 boinc boinc 186621978 Mar 14 17:29 shared/HITS.pool.root.1
[2026-03-14 17:31:50]  *** Contents of shared directory: ***
[2026-03-14 17:31:50] total 616964
[2026-03-14 17:31:50] -rw-r--r--. 2 boinc boinc 442121121 Mar 14 13:37 ATLAS.root_0
[2026-03-14 17:31:50] -rw-r--r--. 2 boinc boinc     15845 Mar 14 13:37 start_atlas.sh
[2026-03-14 17:31:50] -rw-r--r--. 2 boinc boinc    597519 Mar 14 13:37 input.tar.gz
[2026-03-14 17:31:50] -rw-------. 1 boinc boinc 186621978 Mar 14 17:29 HITS.pool.root.1
[2026-03-14 17:31:50] -rw-------. 1 boinc boinc   2406400 Mar 14 17:31 result.tar.gz
17:31:51 (27027): run_atlas exited; CPU time 51224.979491
17:31:51 (27027): called boinc_finish(0)

</stderr_txt>
]]>

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