Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:29:08 (2903909): wrapper (7.7.26015): starting
11:29:08 (2903909): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 11:29:08] Arguments: --nthreads 4
[2026-03-15 11:29:08] Threads: 4
[2026-03-15 11:29:08] Checking for CVMFS
[2026-03-15 11:29:08] No cvmfs_config command found, will try listing directly
[2026-03-15 11:29:08] CVMFS is ok
[2026-03-15 11:29:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 11:29:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 11:29:08] Further information can be found at the LHC@home message board.
[2026-03-15 11:29:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 11:29:08] Checking for apptainer binary...
[2026-03-15 11:29:08] which: no apptainer in ((null))
[2026-03-15 11:29:08] apptainer is not installed, using version from CVMFS
[2026-03-15 11:29:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 11:29:09] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot16/slots/11/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2026-03-15 11:29:09] apptainer works
[2026-03-15 11:29:10] Set ATHENA_PROC_NUMBER=4
[2026-03-15 11:29:10] Set ATHENA_CORE_NUMBER=4
[2026-03-15 11:29:10] Starting ATLAS job with PandaID=7044817355
[2026-03-15 11:29:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot16/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 14:59:33]  *** The last 200 lines of the pilot log: ***
[2026-03-15 14:59:33] 2026-03-15 13:58:42,388 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-15 14:59:33] 2026-03-15 13:58:42,647 | INFO     | job 7044817355 has state=finished
[2026-03-15 14:59:33] 2026-03-15 13:58:42,647 | INFO     | preparing for final server update for job 7044817355 in state='finished'
[2026-03-15 14:59:33] 2026-03-15 13:58:42,647 | INFO     | reading metadata from: /var/lib/boinc/var/slot16/slots/11/PanDA_Pilot-7044817355/jobReport.json
[2026-03-15 14:59:33] 2026-03-15 13:58:42,651 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot16/slots/11/workernode_map.json
[2026-03-15 14:59:33] 2026-03-15 13:58:42,651 | INFO     | this job has now completed (state=finished)
[2026-03-15 14:59:33] 2026-03-15 13:58:42,651 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 14:59:33] 2026-03-15 13:58:42,651 | INFO     | log transfer has been attempted: DONE
[2026-03-15 14:59:33] 2026-03-15 13:58:42,651 | INFO     | job 7044817355 has finished - writing final server update
[2026-03-15 14:59:33] 2026-03-15 13:58:42,652 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2883212/.job.ad'
[2026-03-15 14:59:33] 2026-03-15 13:58:42,652 | INFO     | total number of processed events: 400 (read)
[2026-03-15 14:59:33] 2026-03-15 13:58:42,666 | INFO     | using path: /var/lib/boinc/var/slot16/slots/11/PanDA_Pilot-7044817355/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 14:59:33] 2026-03-15 13:58:42,667 | INFO     | extracted standard info from prmon json
[2026-03-15 14:59:33] 2026-03-15 13:58:42,667 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 14:59:33] 2026-03-15 13:58:42,667 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 14:59:33] 2026-03-15 13:58:42,667 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 14:59:33] 2026-03-15 13:58:42,667 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 14:59:33] 2026-03-15 13:58:42,672 | INFO     | fitting pss+swap vs Time
[2026-03-15 14:59:33] 2026-03-15 13:58:42,672 | INFO     | sum of square deviations: 2593916542.0
[2026-03-15 14:59:33] 2026-03-15 13:58:42,673 | INFO     | sum of deviations: 3464498964.9999986
[2026-03-15 14:59:33] 2026-03-15 13:58:42,674 | INFO     | mean x: 1773576918.0
[2026-03-15 14:59:33] 2026-03-15 13:58:42,674 | INFO     | mean y: 2334110.6650246307
[2026-03-15 14:59:33] 2026-03-15 13:58:42,674 | INFO     | intersect: -2366499002.223496
[2026-03-15 14:59:33] 2026-03-15 13:58:42,674 | INFO     | chi2: 1.2917344211510036
[2026-03-15 14:59:33] 2026-03-15 13:58:42,674 | INFO     | sum of square deviations: 2406926989.5
[2026-03-15 14:59:33] 2026-03-15 13:58:42,676 | INFO     | sum of deviations: 3461441248.499999
[2026-03-15 14:59:33] 2026-03-15 13:58:42,676 | INFO     | mean x: 1773576765.5
[2026-03-15 14:59:33] 2026-03-15 13:58:42,676 | INFO     | mean y: 2334108.5707070706
[2026-03-15 14:59:33] 2026-03-15 13:58:42,676 | INFO     | intersect: -2548275777.090268
[2026-03-15 14:59:33] 2026-03-15 13:58:42,677 | INFO     | chi2: 1.2921162846098488
[2026-03-15 14:59:33] 2026-03-15 13:58:42,677 | INFO     | current chi2=1.2921162846098488 (change=-0.029562071939293597 %)
[2026-03-15 14:59:33] 2026-03-15 13:58:42,677 | INFO     | right removable region: 197
[2026-03-15 14:59:33] 2026-03-15 13:58:42,677 | INFO     | sum of square deviations: 2406926989.5
[2026-03-15 14:59:33] 2026-03-15 13:58:42,678 | INFO     | sum of deviations: -19450984356.0
[2026-03-15 14:59:33] 2026-03-15 13:58:42,678 | INFO     | mean x: 1773577070.5
[2026-03-15 14:59:33] 2026-03-15 13:58:42,679 | INFO     | mean y: 2352523.5656565656
[2026-03-15 14:59:33] 2026-03-15 13:58:42,679 | INFO     | intersect: 14335076367.267359
[2026-03-15 14:59:33] 2026-03-15 13:58:42,679 | INFO     | chi2: 0.043763178381847914
[2026-03-15 14:59:33] 2026-03-15 13:58:42,679 | INFO     | current chi2=0.043763178381847914 (change=96.61206067862985 %)
[2026-03-15 14:59:33] 2026-03-15 13:58:42,679 | INFO     | sum of square deviations: 2229146912.0
[2026-03-15 14:59:33] 2026-03-15 13:58:42,681 | INFO     | sum of deviations: -16057850511.0
[2026-03-15 14:59:33] 2026-03-15 13:58:42,681 | INFO     | mean x: 1773577223.0
[2026-03-15 14:59:33] 2026-03-15 13:58:42,681 | INFO     | mean y: 2349608.2901554406
[2026-03-15 14:59:33] 2026-03-15 13:58:42,681 | INFO     | intersect: 12778464885.09633
[2026-03-15 14:59:33] 2026-03-15 13:58:42,681 | INFO     | chi2: 0.03963018479199575
[2026-03-15 14:59:33] 2026-03-15 13:58:42,681 | INFO     | current chi2=0.03963018479199575 (change=9.443997768604588 %)
[2026-03-15 14:59:33] 2026-03-15 13:58:42,681 | INFO     | left removable region: 20
[2026-03-15 14:59:33] 2026-03-15 13:58:42,682 | INFO     | sum of square deviations: 1719429448.0
[2026-03-15 14:59:33] 2026-03-15 13:58:42,683 | INFO     | sum of deviations: -8004950639.0
[2026-03-15 14:59:33] 2026-03-15 13:58:42,684 | INFO     | mean x: 1773577345.0
[2026-03-15 14:59:33] 2026-03-15 13:58:42,684 | INFO     | mean y: 2342695.892655367
[2026-03-15 14:59:33] 2026-03-15 13:58:42,684 | INFO     | intersect: 8259383493.750198
[2026-03-15 14:59:33] 2026-03-15 13:58:42,684 | INFO     | chi2: 0.02063456824575913
[2026-03-15 14:59:33] 2026-03-15 13:58:42,684 | INFO     | current memory leak: -4.66 B/s (using 177 data points, chi2=0.02)
[2026-03-15 14:59:33] 2026-03-15 13:58:42,685 | INFO     | could have reported an average CPU frequency of 2490 MHz (10 samples)
[2026-03-15 14:59:33] 2026-03-15 13:58:42,685 | INFO     | ..............................
[2026-03-15 14:59:33] 2026-03-15 13:58:42,685 | INFO     | . Timing measurements:
[2026-03-15 14:59:33] 2026-03-15 13:58:42,685 | INFO     | . get job = 0 s
[2026-03-15 14:59:33] 2026-03-15 13:58:42,685 | INFO     | . initial setup = 42 s
[2026-03-15 14:59:33] 2026-03-15 13:58:42,685 | INFO     | . payload setup = 44 s
[2026-03-15 14:59:33] 2026-03-15 13:58:42,686 | INFO     | . stage-in = 0 s
[2026-03-15 14:59:33] 2026-03-15 13:58:42,686 | INFO     | . payload execution = 12391 s
[2026-03-15 14:59:33] 2026-03-15 13:58:42,686 | INFO     | . stage-out = 1 s
[2026-03-15 14:59:33] 2026-03-15 13:58:42,686 | INFO     | . log creation = 0 s
[2026-03-15 14:59:33] 2026-03-15 13:58:42,686 | INFO     | ..............................
[2026-03-15 14:59:33] 2026-03-15 13:58:42,962 | INFO     | 
[2026-03-15 14:59:33] 2026-03-15 13:58:42,962 | INFO     | job summary report
[2026-03-15 14:59:33] 2026-03-15 13:58:42,962 | INFO     | --------------------------------------------------
[2026-03-15 14:59:33] 2026-03-15 13:58:42,962 | INFO     | PanDA job id: 7044817355
[2026-03-15 14:59:33] 2026-03-15 13:58:42,962 | INFO     | task id: 48955010
[2026-03-15 14:59:33] 2026-03-15 13:58:42,963 | INFO     | errors: (none)
[2026-03-15 14:59:33] 2026-03-15 13:58:42,963 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 14:59:33] 2026-03-15 13:58:42,963 | INFO     | pilot state: finished 
[2026-03-15 14:59:33] 2026-03-15 13:58:42,963 | INFO     | transexitcode: 0
[2026-03-15 14:59:33] 2026-03-15 13:58:42,963 | INFO     | exeerrorcode: 0
[2026-03-15 14:59:33] 2026-03-15 13:58:42,963 | INFO     | exeerrordiag: 
[2026-03-15 14:59:33] 2026-03-15 13:58:42,963 | INFO     | exitcode: 0
[2026-03-15 14:59:33] 2026-03-15 13:58:42,963 | INFO     | exitmsg: OK
[2026-03-15 14:59:33] 2026-03-15 13:58:42,963 | INFO     | cpuconsumptiontime: 40726 s
[2026-03-15 14:59:33] 2026-03-15 13:58:42,963 | INFO     | nevents: 400
[2026-03-15 14:59:33] 2026-03-15 13:58:42,963 | INFO     | neventsw: 0
[2026-03-15 14:59:33] 2026-03-15 13:58:42,963 | INFO     | pid: 2914089
[2026-03-15 14:59:33] 2026-03-15 13:58:42,963 | INFO     | pgrp: 2914089
[2026-03-15 14:59:33] 2026-03-15 13:58:42,963 | INFO     | corecount: 4
[2026-03-15 14:59:33] 2026-03-15 13:58:42,964 | INFO     | event service: False
[2026-03-15 14:59:33] 2026-03-15 13:58:42,964 | INFO     | sizes: {0: 2279702, 1: 2280219, 12: 2280219, 12439: 2310423, 12442: 2319501, 12443: 2319639}
[2026-03-15 14:59:33] 2026-03-15 13:58:42,964 | INFO     | --------------------------------------------------
[2026-03-15 14:59:33] 2026-03-15 13:58:42,964 | INFO     | 
[2026-03-15 14:59:33] 2026-03-15 13:58:42,964 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot16/slots/11
[2026-03-15 14:59:33] 2026-03-15 13:58:43,167 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 14:59:33] 2026-03-15 13:58:43,168 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 14:59:33] 2026-03-15 13:58:43,168 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 14:59:33] 2026-03-15 13:58:43,168 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 14:59:33] 2026-03-15 13:58:43,168 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 14:59:33] 2026-03-15 13:58:43,168 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 14:59:33] 2026-03-15 13:58:43,168 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 14:59:33] 2026-03-15 13:58:43,168 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 14:59:33] 2026-03-15 13:58:43,168 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 14:59:33] 2026-03-15 13:58:43,168 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 14:59:33] 2026-03-15 13:58:43,168 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 14:59:33] 2026-03-15 13:58:43,168 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 14:59:33] 2026-03-15 13:58:43,169 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 14:59:33] 2026-03-15 13:58:43,169 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 14:59:33] 2026-03-15 13:58:43,169 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 14:59:33] 2026-03-15 13:58:43,169 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 14:59:33] 2026-03-15 13:58:43,169 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 14:59:33] 2026-03-15 13:58:43,169 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 14:59:33] 2026-03-15 13:58:43,169 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 14:59:33] 2026-03-15 13:58:43,169 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 14:59:33] 2026-03-15 13:58:43,169 | INFO     | job 7044817355 has completed (purged errors)
[2026-03-15 14:59:33] 2026-03-15 13:58:43,169 | INFO     | overall cleanup function is called
[2026-03-15 14:59:33] 2026-03-15 13:58:44,178 | INFO     | --- collectZombieJob: --- 10, [2914089]
[2026-03-15 14:59:33] 2026-03-15 13:58:44,178 | INFO     | zombie collector waiting for pid 2914089
[2026-03-15 14:59:33] 2026-03-15 13:58:44,178 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 14:59:33] 2026-03-15 13:58:44,178 | INFO     | collected zombie processes
[2026-03-15 14:59:33] 2026-03-15 13:58:44,178 | INFO     | will attempt to kill all subprocesses of pid=2914089
[2026-03-15 14:59:33] 2026-03-15 13:58:44,605 | INFO     | process IDs to be killed: [2914089] (in reverse order)
[2026-03-15 14:59:33] 2026-03-15 13:58:44,894 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 14:59:33] 2026-03-15 13:58:44,894 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 14:59:33] 2026-03-15 13:58:44,914 | INFO     | did not find any defunct processes belonging to 2914089
[2026-03-15 14:59:33] 2026-03-15 13:58:44,927 | INFO     | did not find any defunct processes belonging to 2914089
[2026-03-15 14:59:33] 2026-03-15 13:58:44,927 | INFO     | ready for new job
[2026-03-15 14:59:33] 2026-03-15 13:58:44,927 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 14:59:33] 2026-03-15 13:58:44,929 | INFO     | **************************************
[2026-03-15 14:59:33] 2026-03-15 13:58:44,931 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 14:59:33] 2026-03-15 13:58:44,931 | INFO     | **************************************
[2026-03-15 14:59:33] 2026-03-15 13:58:44,931 | INFO     | 
[2026-03-15 14:59:33] 2026-03-15 13:58:44,934 | INFO     | architecture information:
[2026-03-15 14:59:33] 2026-03-15 13:58:44,935 | INFO     | executing command: cat /etc/os-release
[2026-03-15 14:59:33] 2026-03-15 13:58:44,955 | INFO     | cat /etc/os-release:
[2026-03-15 14:59:33] NAME="CentOS Linux"
[2026-03-15 14:59:33] VERSION="7 (Core)"
[2026-03-15 14:59:33] ID="centos"
[2026-03-15 14:59:33] ID_LIKE="rhel fedora"
[2026-03-15 14:59:33] VERSION_ID="7"
[2026-03-15 14:59:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 14:59:33] ANSI_COLOR="0;31"
[2026-03-15 14:59:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 14:59:33] HOME_URL="https://www.centos.org/"
[2026-03-15 14:59:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 14:59:33] 
[2026-03-15 14:59:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 14:59:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 14:59:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 14:59:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 14:59:33] 
[2026-03-15 14:59:33] 2026-03-15 13:58:44,955 | INFO     | **************************************
[2026-03-15 14:59:33] 2026-03-15 13:58:45,459 | INFO     | executing command: df -mP /var/lib/boinc/var/slot16/slots/11
[2026-03-15 14:59:33] 2026-03-15 13:58:45,528 | INFO     | sufficient remaining disk space (33110884352 B)
[2026-03-15 14:59:33] 2026-03-15 13:58:45,529 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 14:59:33] 2026-03-15 13:58:45,529 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 14:59:33] 2026-03-15 13:58:45,529 | INFO     | update_server=False
[2026-03-15 14:59:33] 2026-03-15 13:58:45,529 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 14:59:33] 2026-03-15 13:58:45,530 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 14:59:33] 2026-03-15 13:58:45,908 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 14:59:33] 2026-03-15 13:58:45,908 | INFO     | aborting loop
[2026-03-15 14:59:33] 2026-03-15 13:58:45,928 | INFO     | all data control threads have been joined
[2026-03-15 14:59:33] 2026-03-15 13:58:46,125 | INFO     | all job control threads have been joined
[2026-03-15 14:59:33] 2026-03-15 13:58:46,535 | INFO     | [job] retrieve thread has finished
[2026-03-15 14:59:33] 2026-03-15 13:58:46,725 | INFO     | [payload] validate_post thread has finished
[2026-03-15 14:59:33] 2026-03-15 13:58:46,856 | INFO     | all payload control threads have been joined
[2026-03-15 14:59:33] 2026-03-15 13:58:46,914 | INFO     | [job] job monitor thread has finished
[2026-03-15 14:59:33] 2026-03-15 13:58:46,934 | INFO     | [data] control thread has finished
[2026-03-15 14:59:33] 2026-03-15 13:58:46,964 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 14:59:33] 2026-03-15 13:58:46,986 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 14:59:33] 2026-03-15 13:58:47,068 | INFO     | [data] copytool_in thread has finished
[2026-03-15 14:59:33] 2026-03-15 13:58:47,131 | INFO     | [job] control thread has finished
[2026-03-15 14:59:33] 2026-03-15 13:58:47,535 | INFO     | [data] copytool_out thread has finished
[2026-03-15 14:59:33] 2026-03-15 13:58:47,682 | INFO     | [payload] failed_post thread has finished
[2026-03-15 14:59:33] 2026-03-15 13:58:47,755 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 14:59:33] 2026-03-15 13:58:47,790 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 14:59:33] 2026-03-15 13:58:47,861 | INFO     | [payload] control thread has finished
[2026-03-15 14:59:33] 2026-03-15 13:58:47,876 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 14:59:33] 2026-03-15 13:58:47,955 | INFO     | [job] validate thread has finished
[2026-03-15 14:59:33] 2026-03-15 13:58:48,318 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 14:59:33] 2026-03-15 13:58:48,795 | INFO     | [job] queue monitor thread has finished
[2026-03-15 14:59:33] 2026-03-15 13:58:52,327 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 14:59:33] 2026-03-15 13:59:15,807 | INFO     | PID=2908532 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 14:59:33] 2026-03-15 13:59:15,807 | INFO     | .. there are 13 such processes running
[2026-03-15 14:59:33] 2026-03-15 13:59:15,808 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 14:59:33] 2026-03-15 13:59:15,808 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 14:59:33] 2026-03-15 13:59:15,808 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 14:59:33] 2026-03-15 13:59:27,769 | INFO     | [monitor] cgroup control has ended
[2026-03-15 14:59:33] 2026-03-15 13:59:28,226 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22444708792128)>', '<ExcThread(monitor, started 22444464408320)>']
[2026-03-15 14:59:33] 2026-03-15 13:59:28,890 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 14:59:33] 2026-03-15 13:59:28,891 | INFO     | [monitor] control thread has ended
[2026-03-15 14:59:33] 2026-03-15 13:59:33,251 | INFO     | all workflow threads have been joined
[2026-03-15 14:59:33] 2026-03-15 13:59:33,251 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 14:59:33] 2026-03-15 13:59:33,251 | INFO     | traces error code: 0
[2026-03-15 14:59:33] 2026-03-15 13:59:33,252 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 14:59:33] 2026-03-15 13:59:33,382 [wrapper] ==== pilot stdout END ====
[2026-03-15 14:59:33] 2026-03-15 13:59:33,385 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 14:59:33] 2026-03-15 13:59:33,387 [wrapper] pilotpid: 2908532
[2026-03-15 14:59:33] 2026-03-15 13:59:33,389 [wrapper] Pilot exit status: 0
[2026-03-15 14:59:33] 2026-03-15 13:59:33,398 [wrapper] pandaids: 7044817355
[2026-03-15 14:59:33] 2026-03-15 13:59:33,473 [wrapper] cleanup supervisor_pilot 3157914 2908533
[2026-03-15 14:59:33] 2026-03-15 13:59:33,476 [wrapper] Test setup, not cleaning
[2026-03-15 14:59:33] 2026-03-15 13:59:33,480 [wrapper] apfmon messages muted
[2026-03-15 14:59:33] 2026-03-15 13:59:33,482 [wrapper] ==== wrapper stdout END ====
[2026-03-15 14:59:33] 2026-03-15 13:59:33,484 [wrapper] ==== wrapper stderr END ====
[2026-03-15 14:59:33]  *** Error codes and diagnostics ***
[2026-03-15 14:59:33]     "exeErrorCode": 0,
[2026-03-15 14:59:33]     "exeErrorDiag": "",
[2026-03-15 14:59:33]     "pilotErrorCode": 0,
[2026-03-15 14:59:33]     "pilotErrorDiag": "",
[2026-03-15 14:59:33]  *** Listing of results directory ***
[2026-03-15 14:59:33] total 622556
[2026-03-15 14:59:33] -rw-r--r--. 1 boinc boinc    585013 Mar 13 19:59 pilot3.tar.gz
[2026-03-15 14:59:33] -rwx------. 1 boinc boinc     36322 Mar 13 20:02 runpilot2-wrapper.sh
[2026-03-15 14:59:33] -rw-r--r--. 1 boinc boinc      5111 Mar 13 20:03 queuedata.json
[2026-03-15 14:59:33] -rw-r--r--. 1 boinc boinc       100 Mar 15 11:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 14:59:33] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 11:29 run_atlas
[2026-03-15 14:59:33] -rw-r--r--. 1 boinc boinc       105 Mar 15 11:29 job.xml
[2026-03-15 14:59:33] -rw-r--r--. 1 boinc boinc      6563 Mar 15 11:29 init_data.xml
[2026-03-15 14:59:33] -rw-r--r--. 2 boinc boinc 443281439 Mar 15 11:29 EVNT.46701403._001665.pool.root.1
[2026-03-15 14:59:33] -rw-r--r--. 2 boinc boinc     15845 Mar 15 11:29 start_atlas.sh
[2026-03-15 14:59:33] drwxrwx--x. 2 boinc boinc      4096 Mar 15 11:29 shared
[2026-03-15 14:59:33] -rw-r--r--. 2 boinc boinc    597532 Mar 15 11:29 input.tar.gz
[2026-03-15 14:59:33] -rw-r--r--. 1 boinc boinc         0 Mar 15 11:29 boinc_lockfile
[2026-03-15 14:59:33] -rw-r--r--. 1 boinc boinc      2563 Mar 15 11:29 pandaJob.out
[2026-03-15 14:59:33] -rw-------. 1 boinc boinc   1006481 Mar 15 11:30 agis_schedconf.cvmfs.json
[2026-03-15 14:59:33] -rw-------. 1 boinc boinc       448 Mar 15 11:31 workernode_map.json
[2026-03-15 14:59:33] drwx------. 5 boinc boinc      4096 Mar 15 11:31 pilot3
[2026-03-15 14:59:33] -rw-------. 1 boinc boinc 186067251 Mar 15 14:58 HITS.48955010._033527.pool.root.1
[2026-03-15 14:59:33] -rw-r--r--. 1 boinc boinc       532 Mar 15 14:58 boinc_task_state.xml
[2026-03-15 14:59:33] -rw-------. 1 boinc boinc      1031 Mar 15 14:58 memory_monitor_summary.json
[2026-03-15 14:59:33] -rw-------. 1 boinc boinc   1511579 Mar 15 14:58 agis_ddmendpoints.agis.ALL.json
[2026-03-15 14:59:33] -rw-------. 1 boinc boinc    372928 Mar 15 14:58 log.48955010._033527.job.log.tgz.1
[2026-03-15 14:59:33] -rw-------. 1 boinc boinc      6402 Mar 15 14:58 heartbeat.json
[2026-03-15 14:59:33] -rw-r--r--. 1 boinc boinc        28 Mar 15 14:59 wrapper_checkpoint.txt
[2026-03-15 14:59:33] -rw-r--r--. 1 boinc boinc      8192 Mar 15 14:59 boinc_mmap_file
[2026-03-15 14:59:33] -rw-------. 1 boinc boinc        95 Mar 15 14:59 pilot_heartbeat.json
[2026-03-15 14:59:33] -rw-------. 1 boinc boinc      4830 Mar 15 14:59 pilotlog.txt
[2026-03-15 14:59:33] -rw-------. 1 boinc boinc   1729104 Mar 15 14:59 log.48955010._033527.job.log.1
[2026-03-15 14:59:33] -rw-------. 1 boinc boinc       357 Mar 15 14:59 output.list
[2026-03-15 14:59:33] -rw-r--r--. 1 boinc boinc       620 Mar 15 14:59 runtime_log
[2026-03-15 14:59:33] -rw-------. 1 boinc boinc   2119680 Mar 15 14:59 result.tar.gz
[2026-03-15 14:59:33] -rw-------. 1 boinc boinc       664 Mar 15 14:59 tmVNDmWxML9n9Rq4apOajLDm4fhM0noT9bVooX4SDmHwnLDmaxqXCn.diag
[2026-03-15 14:59:33] -rw-r--r--. 1 boinc boinc      9222 Mar 15 14:59 runtime_log.err
[2026-03-15 14:59:33] -rw-r--r--. 1 boinc boinc     21147 Mar 15 14:59 stderr.txt
[2026-03-15 14:59:33] HITS file was successfully produced:
[2026-03-15 14:59:33] -rw-------. 1 boinc boinc 186067251 Mar 15 14:58 shared/HITS.pool.root.1
[2026-03-15 14:59:33]  *** Contents of shared directory: ***
[2026-03-15 14:59:33] total 617284
[2026-03-15 14:59:33] -rw-r--r--. 2 boinc boinc 443281439 Mar 15 11:29 ATLAS.root_0
[2026-03-15 14:59:33] -rw-r--r--. 2 boinc boinc     15845 Mar 15 11:29 start_atlas.sh
[2026-03-15 14:59:33] -rw-r--r--. 2 boinc boinc    597532 Mar 15 11:29 input.tar.gz
[2026-03-15 14:59:33] -rw-------. 1 boinc boinc 186067251 Mar 15 14:58 HITS.pool.root.1
[2026-03-15 14:59:33] -rw-------. 1 boinc boinc   2119680 Mar 15 14:59 result.tar.gz
14:59:34 (2903909): run_atlas exited; CPU time 41208.783544
14:59:34 (2903909): called boinc_finish(0)

</stderr_txt>
]]>

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