Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:17:09 (3489910): wrapper (7.7.26015): starting
15:17:09 (3489910): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 15:17:09] Arguments: --nthreads 8
[2026-03-13 15:17:09] Threads: 8
[2026-03-13 15:17:09] Checking for CVMFS
[2026-03-13 15:17:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 15:17:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 15:17:10] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 15:17:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 15:17:10] 2.13.3.0 11460 184540 427432 157252 3 82 26842049 32935936 45828 16776704 0 1299283095 99.623 1251390783 34448 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-13 15:17:10] CVMFS is ok
[2026-03-13 15:17:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 15:17:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 15:17:10] Further information can be found at the LHC@home message board.
[2026-03-13 15:17:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 15:17:10] Checking for apptainer binary...
[2026-03-13 15:17:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 15:17:10] Running /usr/bin/apptainer --version
[2026-03-13 15:17:10] apptainer version 1.4.5-2.el9
[2026-03-13 15:17:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 15:17:10] c7-3-34.aglt2.org
[2026-03-13 15:17:10] apptainer works
[2026-03-13 15:17:10] Set ATHENA_PROC_NUMBER=8
[2026-03-13 15:17:10] Set ATHENA_CORE_NUMBER=8
[2026-03-13 15:17:10] Starting ATLAS job with PandaID=7043851106
[2026-03-13 15:17:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
19:00:10 (3489910): BOINC client no longer exists - exiting
19:00:10 (3489910): timer handler: client dead, exiting
19:11:42 (451096): wrapper (7.7.26015): starting
19:11:42 (451096): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 19:11:42] Arguments: --nthreads 8
[2026-03-13 19:11:42] Threads: 8
[2026-03-13 19:11:42] This job has been restarted, cleaning up previous attempt
[2026-03-13 19:11:42] Checking for CVMFS
[2026-03-13 19:11:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 19:11:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 19:11:43] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 19:11:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 19:11:43] 2.13.3.0 11460 184774 435328 157257 1 70 31259289 32935936 46573 16776704 0 1300183832 99.623 1252460285 34442 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-13 19:11:43] CVMFS is ok
[2026-03-13 19:11:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 19:11:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 19:11:43] Further information can be found at the LHC@home message board.
[2026-03-13 19:11:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 19:11:43] Checking for apptainer binary...
[2026-03-13 19:11:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 19:11:43] Running /usr/bin/apptainer --version
[2026-03-13 19:11:43] apptainer version 1.4.5-2.el9
[2026-03-13 19:11:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 19:11:44] c7-3-34.aglt2.org
[2026-03-13 19:11:44] apptainer works
[2026-03-13 19:11:44] Set ATHENA_PROC_NUMBER=8
[2026-03-13 19:11:44] Set ATHENA_CORE_NUMBER=8
[2026-03-13 19:11:44] Starting ATLAS job with PandaID=7043851106
[2026-03-13 19:11:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 22:52:34]  *** The last 200 lines of the pilot log: ***
[2026-03-13 22:52:34] 2026-03-14 02:51:26,570 | INFO     | job 7043851106 has finished - writing final server update
[2026-03-13 22:52:34] 2026-03-14 02:51:26,571 | INFO     | total number of processed events: 400 (read)
[2026-03-13 22:52:34] 2026-03-14 02:51:26,681 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-7043851106/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 22:52:34] 2026-03-14 02:51:26,682 | INFO     | extracted standard info from prmon json
[2026-03-13 22:52:34] 2026-03-14 02:51:26,682 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 22:52:34] 2026-03-14 02:51:26,682 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 22:52:34] 2026-03-14 02:51:26,682 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 22:52:34] 2026-03-14 02:51:26,682 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 22:52:34] 2026-03-14 02:51:26,686 | INFO     | fitting pss+swap vs Time
[2026-03-13 22:52:34] 2026-03-14 02:51:26,686 | INFO     | sum of square deviations: 3081628748.958148
[2026-03-13 22:52:34] 2026-03-14 02:51:26,688 | INFO     | sum of deviations: 24273696400.72556
[2026-03-13 22:52:34] 2026-03-14 02:51:26,688 | INFO     | mean x: 1773450111.0139534
[2026-03-13 22:52:34] 2026-03-14 02:51:26,688 | INFO     | mean y: 2459240.758139535
[2026-03-13 22:52:34] 2026-03-14 02:51:26,688 | INFO     | intersect: -13966838518.142796
[2026-03-13 22:52:34] 2026-03-14 02:51:26,688 | INFO     | chi2: 3.845910446364055
[2026-03-13 22:52:34] 2026-03-14 02:51:26,688 | INFO     | sum of square deviations: 2871588516.45714
[2026-03-13 22:52:34] 2026-03-14 02:51:26,690 | INFO     | sum of deviations: 52051399021.14288
[2026-03-13 22:52:34] 2026-03-14 02:51:26,690 | INFO     | mean x: 1773449958.5142858
[2026-03-13 22:52:34] 2026-03-14 02:51:26,690 | INFO     | mean y: 2479114.4523809524
[2026-03-13 22:52:34] 2026-03-14 02:51:26,690 | INFO     | intersect: -32143683507.950687
[2026-03-13 22:52:34] 2026-03-14 02:51:26,690 | INFO     | chi2: 2.27226176293465
[2026-03-13 22:52:34] 2026-03-14 02:51:26,691 | INFO     | current chi2=2.27226176293465 (change=40.917455187162275 %)
[2026-03-13 22:52:34] 2026-03-14 02:51:26,691 | INFO     | sum of square deviations: 2671315908.9560866
[2026-03-13 22:52:34] 2026-03-14 02:51:26,692 | INFO     | sum of deviations: 50649625122.00974
[2026-03-13 22:52:34] 2026-03-14 02:51:26,692 | INFO     | mean x: 1773449806.0146341
[2026-03-13 22:52:34] 2026-03-14 02:51:26,692 | INFO     | mean y: 2478046.6634146343
[2026-03-13 22:52:34] 2026-03-14 02:51:26,692 | INFO     | intersect: -33623109831.650955
[2026-03-13 22:52:34] 2026-03-14 02:51:26,692 | INFO     | chi2: 2.273496174054173
[2026-03-13 22:52:34] 2026-03-14 02:51:26,692 | INFO     | current chi2=2.273496174054173 (change=-0.054325216383907894 %)
[2026-03-13 22:52:34] 2026-03-14 02:51:26,692 | INFO     | right removable region: 204
[2026-03-13 22:52:34] 2026-03-14 02:51:26,693 | INFO     | sum of square deviations: 2871586686.45714
[2026-03-13 22:52:34] 2026-03-14 02:51:26,694 | INFO     | sum of deviations: -22141501327.314285
[2026-03-13 22:52:34] 2026-03-14 02:51:26,694 | INFO     | mean x: 1773450263.5142858
[2026-03-13 22:52:34] 2026-03-14 02:51:26,694 | INFO     | mean y: 2492725.438095238
[2026-03-13 22:52:34] 2026-03-14 02:51:26,694 | INFO     | intersect: 13676762615.571014
[2026-03-13 22:52:34] 2026-03-14 02:51:26,694 | INFO     | chi2: 1.7381019699494722
[2026-03-13 22:52:34] 2026-03-14 02:51:26,695 | INFO     | current chi2=1.7381019699494722 (change=54.806488757618276 %)
[2026-03-13 22:52:34] 2026-03-14 02:51:26,695 | INFO     | sum of square deviations: 2671312248.9560866
[2026-03-13 22:52:34] 2026-03-14 02:51:26,696 | INFO     | sum of deviations: -32474840756.414635
[2026-03-13 22:52:34] 2026-03-14 02:51:26,696 | INFO     | mean x: 1773450416.0146341
[2026-03-13 22:52:34] 2026-03-14 02:51:26,696 | INFO     | mean y: 2500574.8048780486
[2026-03-13 22:52:34] 2026-03-14 02:51:26,696 | INFO     | intersect: 21562136619.591076
[2026-03-13 22:52:34] 2026-03-14 02:51:26,696 | INFO     | chi2: 1.6394437742135792
[2026-03-13 22:52:34] 2026-03-14 02:51:26,696 | INFO     | current chi2=1.6394437742135792 (change=5.676202975522836 %)
[2026-03-13 22:52:34] 2026-03-14 02:51:26,696 | INFO     | left removable region: 20
[2026-03-13 22:52:34] 2026-03-14 02:51:26,696 | INFO     | sum of square deviations: 1931577631.9510882
[2026-03-13 22:52:34] 2026-03-14 02:51:26,698 | INFO     | sum of deviations: -5796436160.951086
[2026-03-13 22:52:34] 2026-03-14 02:51:26,698 | INFO     | mean x: 1773450385.5163043
[2026-03-13 22:52:34] 2026-03-14 02:51:26,698 | INFO     | mean y: 2523439.4836956523
[2026-03-13 22:52:34] 2026-03-14 02:51:26,698 | INFO     | intersect: 5324438424.529275
[2026-03-13 22:52:34] 2026-03-14 02:51:26,698 | INFO     | chi2: 0.010230244825116948
[2026-03-13 22:52:34] 2026-03-14 02:51:26,699 | INFO     | current memory leak: -3.00 B/s (using 184 data points, chi2=0.01)
[2026-03-13 22:52:34] 2026-03-14 02:51:26,699 | INFO     | could have reported an average CPU frequency of 3280 MHz (11 samples)
[2026-03-13 22:52:34] 2026-03-14 02:51:26,699 | INFO     | ..............................
[2026-03-13 22:52:34] 2026-03-14 02:51:26,699 | INFO     | . Timing measurements:
[2026-03-13 22:52:34] 2026-03-14 02:51:26,699 | INFO     | . get job = 0 s
[2026-03-13 22:52:34] 2026-03-14 02:51:26,699 | INFO     | . initial setup = 4 s
[2026-03-13 22:52:34] 2026-03-14 02:51:26,699 | INFO     | . payload setup = 23 s
[2026-03-13 22:52:34] 2026-03-14 02:51:26,699 | INFO     | . stage-in = 0 s
[2026-03-13 22:52:34] 2026-03-14 02:51:26,699 | INFO     | . payload execution = 13105 s
[2026-03-13 22:52:34] 2026-03-14 02:51:26,699 | INFO     | . stage-out = 5 s
[2026-03-13 22:52:34] 2026-03-14 02:51:26,700 | INFO     | . log creation = 0 s
[2026-03-13 22:52:34] 2026-03-14 02:51:26,700 | INFO     | ..............................
[2026-03-13 22:52:34] 2026-03-14 02:51:27,084 | INFO     | 
[2026-03-13 22:52:34] 2026-03-14 02:51:27,084 | INFO     | job summary report
[2026-03-13 22:52:34] 2026-03-14 02:51:27,085 | INFO     | --------------------------------------------------
[2026-03-13 22:52:34] 2026-03-14 02:51:27,085 | INFO     | PanDA job id: 7043851106
[2026-03-13 22:52:34] 2026-03-14 02:51:27,085 | INFO     | task id: 48955010
[2026-03-13 22:52:34] 2026-03-14 02:51:27,085 | INFO     | errors: (none)
[2026-03-13 22:52:34] 2026-03-14 02:51:27,085 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 22:52:34] 2026-03-14 02:51:27,085 | INFO     | pilot state: finished 
[2026-03-13 22:52:34] 2026-03-14 02:51:27,085 | INFO     | transexitcode: 0
[2026-03-13 22:52:34] 2026-03-14 02:51:27,085 | INFO     | exeerrorcode: 0
[2026-03-13 22:52:34] 2026-03-14 02:51:27,085 | INFO     | exeerrordiag: 
[2026-03-13 22:52:34] 2026-03-14 02:51:27,085 | INFO     | exitcode: 0
[2026-03-13 22:52:34] 2026-03-14 02:51:27,085 | INFO     | exitmsg: OK
[2026-03-13 22:52:34] 2026-03-14 02:51:27,085 | INFO     | cpuconsumptiontime: 30414 s
[2026-03-13 22:52:34] 2026-03-14 02:51:27,085 | INFO     | nevents: 400
[2026-03-13 22:52:34] 2026-03-14 02:51:27,085 | INFO     | neventsw: 0
[2026-03-13 22:52:34] 2026-03-14 02:51:27,085 | INFO     | pid: 484550
[2026-03-13 22:52:34] 2026-03-14 02:51:27,085 | INFO     | pgrp: 484550
[2026-03-13 22:52:34] 2026-03-14 02:51:27,086 | INFO     | corecount: 8
[2026-03-13 22:52:34] 2026-03-14 02:51:27,086 | INFO     | event service: False
[2026-03-13 22:52:34] 2026-03-14 02:51:27,086 | INFO     | sizes: {0: 2279692, 1: 2280209, 13136: 2310298, 13137: 2310297, 13143: 2319351, 13146: 2319407, 13149: 2319729}
[2026-03-13 22:52:34] 2026-03-14 02:51:27,086 | INFO     | --------------------------------------------------
[2026-03-13 22:52:34] 2026-03-14 02:51:27,086 | INFO     | 
[2026-03-13 22:52:34] 2026-03-14 02:51:27,086 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-03-13 22:52:34] 2026-03-14 02:51:27,170 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 22:52:34] 2026-03-14 02:51:27,171 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 22:52:34] 2026-03-14 02:51:27,171 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 22:52:34] 2026-03-14 02:51:27,171 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 22:52:34] 2026-03-14 02:51:27,171 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 22:52:34] 2026-03-14 02:51:27,171 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 22:52:34] 2026-03-14 02:51:27,171 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 22:52:34] 2026-03-14 02:51:27,171 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 22:52:34] 2026-03-14 02:51:27,171 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 22:52:34] 2026-03-14 02:51:27,171 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 22:52:34] 2026-03-14 02:51:27,171 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 22:52:34] 2026-03-14 02:51:27,171 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 22:52:34] 2026-03-14 02:51:27,171 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 22:52:34] 2026-03-14 02:51:27,172 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 22:52:34] 2026-03-14 02:51:27,172 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 22:52:34] 2026-03-14 02:51:27,172 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 22:52:34] 2026-03-14 02:51:27,172 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 22:52:34] 2026-03-14 02:51:27,172 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 22:52:34] 2026-03-14 02:51:27,172 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 22:52:34] 2026-03-14 02:51:27,172 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 22:52:34] 2026-03-14 02:51:27,172 | INFO     | job 7043851106 has completed (purged errors)
[2026-03-13 22:52:34] 2026-03-14 02:51:27,172 | INFO     | overall cleanup function is called
[2026-03-13 22:52:34] 2026-03-14 02:51:28,216 | INFO     | --- collectZombieJob: --- 10, [484550]
[2026-03-13 22:52:34] 2026-03-14 02:51:28,217 | INFO     | zombie collector waiting for pid 484550
[2026-03-13 22:52:34] 2026-03-14 02:51:28,217 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 22:52:34] 2026-03-14 02:51:28,217 | INFO     | collected zombie processes
[2026-03-13 22:52:34] 2026-03-14 02:51:28,217 | INFO     | will attempt to kill all subprocesses of pid=484550
[2026-03-13 22:52:34] 2026-03-14 02:51:33,473 | INFO     | PID=471223 has CPU usage=14.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-13 22:52:34] 2026-03-14 02:51:33,474 | INFO     | .. there are 81 such processes running
[2026-03-13 22:52:34] 2026-03-14 02:51:35,219 | INFO     | process IDs to be killed: [484550] (in reverse order)
[2026-03-13 22:52:34] 2026-03-14 02:51:35,679 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 22:52:34] 2026-03-14 02:51:35,680 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 22:52:34] 2026-03-14 02:51:35,720 | INFO     | did not find any defunct processes belonging to 484550
[2026-03-13 22:52:34] 2026-03-14 02:51:35,749 | INFO     | did not find any defunct processes belonging to 484550
[2026-03-13 22:52:34] 2026-03-14 02:51:35,750 | INFO     | ready for new job
[2026-03-13 22:52:34] 2026-03-14 02:51:35,750 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 22:52:34] 2026-03-14 02:51:35,808 | INFO     | **************************************
[2026-03-13 22:52:34] 2026-03-14 02:51:35,808 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 22:52:34] 2026-03-14 02:51:35,808 | INFO     | **************************************
[2026-03-13 22:52:34] 2026-03-14 02:51:35,808 | INFO     | 
[2026-03-13 22:52:34] 2026-03-14 02:51:35,848 | INFO     | architecture information:
[2026-03-13 22:52:34] 2026-03-14 02:51:35,882 | INFO     | executing command: cat /etc/os-release
[2026-03-13 22:52:34] 2026-03-14 02:51:35,984 | INFO     | cat /etc/os-release:
[2026-03-13 22:52:34] NAME="CentOS Linux"
[2026-03-13 22:52:34] VERSION="7 (Core)"
[2026-03-13 22:52:34] ID="centos"
[2026-03-13 22:52:34] ID_LIKE="rhel fedora"
[2026-03-13 22:52:34] VERSION_ID="7"
[2026-03-13 22:52:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 22:52:34] ANSI_COLOR="0;31"
[2026-03-13 22:52:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 22:52:34] HOME_URL="https://www.centos.org/"
[2026-03-13 22:52:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 22:52:34] 
[2026-03-13 22:52:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 22:52:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 22:52:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 22:52:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 22:52:34] 
[2026-03-13 22:52:34] 2026-03-14 02:51:35,985 | INFO     | **************************************
[2026-03-13 22:52:34] 2026-03-14 02:51:36,511 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-03-13 22:52:34] 2026-03-14 02:51:36,716 | INFO     | sufficient remaining disk space (71940702208 B)
[2026-03-13 22:52:34] 2026-03-14 02:51:36,716 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 22:52:34] 2026-03-14 02:51:36,716 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 22:52:34] 2026-03-14 02:51:36,716 | INFO     | update_server=False
[2026-03-13 22:52:34] 2026-03-14 02:51:36,716 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 22:52:34] 2026-03-14 02:51:36,717 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 22:52:34] 2026-03-14 02:51:36,723 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 22:52:34] 2026-03-14 02:51:36,723 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 22:52:34] 2026-03-14 02:51:36,724 | INFO     | aborting loop
[2026-03-13 22:52:34] 2026-03-14 02:51:36,734 | INFO     | all payload control threads have been joined
[2026-03-13 22:52:34] 2026-03-14 02:51:37,304 | INFO     | all data control threads have been joined
[2026-03-13 22:52:34] 2026-03-14 02:51:37,388 | INFO     | all job control threads have been joined
[2026-03-13 22:52:34] 2026-03-14 02:51:37,733 | INFO     | [job] retrieve thread has finished
[2026-03-13 22:52:34] 2026-03-14 02:51:37,739 | INFO     | [job] queue monitor thread has finished
[2026-03-13 22:52:34] 2026-03-14 02:51:37,740 | INFO     | [job] job monitor thread has finished
[2026-03-13 22:52:34] 2026-03-14 02:51:37,740 | INFO     | [payload] control thread has finished
[2026-03-13 22:52:34] 2026-03-14 02:51:38,323 | INFO     | [data] control thread has finished
[2026-03-13 22:52:34] 2026-03-14 02:51:38,394 | INFO     | [job] control thread has finished
[2026-03-13 22:52:34] 2026-03-14 02:51:38,549 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 22:52:34] 2026-03-14 02:51:38,585 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 22:52:34] 2026-03-14 02:51:38,592 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 22:52:34] 2026-03-14 02:51:38,593 | INFO     | [job] validate thread has finished
[2026-03-13 22:52:34] 2026-03-14 02:51:38,593 | INFO     | [data] copytool_in thread has finished
[2026-03-13 22:52:34] 2026-03-14 02:51:38,598 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 22:52:34] 2026-03-14 02:51:38,634 | INFO     | [payload] failed_post thread has finished
[2026-03-13 22:52:34] 2026-03-14 02:51:38,724 | INFO     | [data] copytool_out thread has finished
[2026-03-13 22:52:34] 2026-03-14 02:51:39,237 | INFO     | [payload] validate_post thread has finished
[2026-03-13 22:52:34] 2026-03-14 02:51:39,799 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 22:52:34] 2026-03-14 02:51:40,956 | INFO     | [monitor] cgroup control has ended
[2026-03-13 22:52:34] 2026-03-14 02:51:43,839 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 22:52:34] 2026-03-14 02:51:45,801 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140664666707776)>', '<ExcThread(monitor, started 140663727318784)>']
[2026-03-13 22:52:34] 2026-03-14 02:51:50,872 | INFO     | all workflow threads have been joined
[2026-03-13 22:52:34] 2026-03-14 02:51:50,872 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 22:52:34] 2026-03-14 02:51:50,873 | INFO     | traces error code: 0
[2026-03-13 22:52:34] 2026-03-14 02:51:50,873 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 22:52:34] 2026-03-14 02:52:12,241 | INFO     | PID=471223 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-13 22:52:34] 2026-03-14 02:52:12,241 | INFO     | .. there are 81 such processes running
[2026-03-13 22:52:34] 2026-03-14 02:52:12,262 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 22:52:34] 2026-03-14 02:52:12,263 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 22:52:34] 2026-03-14 02:52:12,263 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 22:52:34] 2026-03-14 02:52:12,263 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 22:52:34] 2026-03-14 02:52:12,263 | INFO     | [monitor] control thread has ended
[2026-03-13 22:52:34] 2026-03-14 02:52:12,640 [wrapper] ==== pilot stdout END ====
[2026-03-13 22:52:34] 2026-03-14 02:52:12,650 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 22:52:34] 2026-03-14 02:52:12,663 [wrapper] pilotpid: 471223
[2026-03-13 22:52:34] 2026-03-14 02:52:12,666 [wrapper] Pilot exit status: 0
[2026-03-13 22:52:34] 2026-03-14 02:52:12,695 [wrapper] pandaids: 7043851106 7043851106
[2026-03-13 22:52:34] 2026-03-14 02:52:12,846 [wrapper] cleanup supervisor_pilot 1706850 471225
[2026-03-13 22:52:34] 2026-03-14 02:52:12,850 [wrapper] Test setup, not cleaning
[2026-03-13 22:52:34] 2026-03-14 02:52:12,853 [wrapper] apfmon messages muted
[2026-03-13 22:52:34] 2026-03-14 02:52:12,855 [wrapper] ==== wrapper stdout END ====
[2026-03-13 22:52:34] 2026-03-14 02:52:12,857 [wrapper] ==== wrapper stderr END ====
[2026-03-13 22:52:34]  *** Error codes and diagnostics ***
[2026-03-13 22:52:34]     "exeErrorCode": 0,
[2026-03-13 22:52:34]     "exeErrorDiag": "",
[2026-03-13 22:52:34]     "pilotErrorCode": 0,
[2026-03-13 22:52:34]     "pilotErrorDiag": "",
[2026-03-13 22:52:34]  *** Listing of results directory ***
[2026-03-13 22:52:34] total 1053640
[2026-03-13 22:52:34] drwx------. 5 boincer umatlas      4096 Mar 10 12:00 pilot3
[2026-03-13 22:52:34] -rw-r--r--. 1 boincer umatlas    585013 Mar 13 03:23 pilot3.tar.gz
[2026-03-13 22:52:34] -rw-r--r--. 1 boincer umatlas      5111 Mar 13 03:24 queuedata.json
[2026-03-13 22:52:34] -rwx------. 1 boincer umatlas     36322 Mar 13 03:24 runpilot2-wrapper.sh
[2026-03-13 22:52:34] -rw-r--r--. 1 boincer umatlas       100 Mar 13 15:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 22:52:34] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 13 15:17 run_atlas
[2026-03-13 22:52:34] -rw-r--r--. 1 boincer umatlas       105 Mar 13 15:17 job.xml
[2026-03-13 22:52:34] -rw-r--r--. 3 boincer umatlas 440334144 Mar 13 15:17 EVNT.46701403._001564.pool.root.1
[2026-03-13 22:52:34] -rw-r--r--. 3 boincer umatlas 440334144 Mar 13 15:17 ATLAS.root_0
[2026-03-13 22:52:34] -rw-r--r--. 2 boincer umatlas     15845 Mar 13 15:17 start_atlas.sh
[2026-03-13 22:52:34] drwxrwx--x. 2 boincer umatlas      4096 Mar 13 15:17 shared
[2026-03-13 22:52:34] -rw-r--r--. 2 boincer umatlas    597528 Mar 13 15:17 input.tar.gz
[2026-03-13 22:52:34] -rw-r--r--. 1 boincer umatlas         0 Mar 13 15:17 boinc_lockfile
[2026-03-13 22:52:34] -rw-r--r--. 1 boincer umatlas      2564 Mar 13 19:11 pandaJob.out
[2026-03-13 22:52:34] -rw-------. 1 boincer umatlas        57 Mar 13 19:11 setup.sh.local
[2026-03-13 22:52:34] -rw-------. 1 boincer umatlas   1006717 Mar 13 19:12 agis_schedconf.cvmfs.json
[2026-03-13 22:52:34] -rw-------. 1 boincer umatlas       428 Mar 13 19:12 workernode_map.json
[2026-03-13 22:52:34] -rw-r--r--. 1 boincer umatlas      6945 Mar 13 22:46 init_data.xml
[2026-03-13 22:52:34] -rw-------. 1 boincer umatlas 190452550 Mar 13 22:49 HITS.48955010._028516.pool.root.1
[2026-03-13 22:52:34] -rw-r--r--. 1 boincer umatlas       532 Mar 13 22:49 boinc_task_state.xml
[2026-03-13 22:52:34] -rw-------. 1 boincer umatlas      1046 Mar 13 22:51 memory_monitor_summary.json
[2026-03-13 22:52:34] -rw-------. 1 boincer umatlas   1511579 Mar 13 22:51 agis_ddmendpoints.agis.ALL.json
[2026-03-13 22:52:34] -rw-------. 1 boincer umatlas    441065 Mar 13 22:51 log.48955010._028516.job.log.tgz.1
[2026-03-13 22:52:34] -rw-------. 1 boincer umatlas      6359 Mar 13 22:51 heartbeat.json
[2026-03-13 22:52:34] -rw-------. 1 boincer umatlas        96 Mar 13 22:52 pilot_heartbeat.json
[2026-03-13 22:52:34] -rw-------. 1 boincer umatlas       822 Mar 13 22:52 pilotlog.txt
[2026-03-13 22:52:34] -rw-------. 1 boincer umatlas   1491351 Mar 13 22:52 log.48955010._028516.job.log.1
[2026-03-13 22:52:34] -rw-------. 1 boincer umatlas       357 Mar 13 22:52 output.list
[2026-03-13 22:52:34] -rw-r--r--. 1 boincer umatlas       620 Mar 13 22:52 runtime_log
[2026-03-13 22:52:34] -rw-------. 1 boincer umatlas   1945600 Mar 13 22:52 result.tar.gz
[2026-03-13 22:52:34] -rw-r--r--. 1 boincer umatlas      9422 Mar 13 22:52 runtime_log.err
[2026-03-13 22:52:34] -rw-------. 1 boincer umatlas       783 Mar 13 22:52 ARmKDmc3BL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmwQmLDmWu9jRm.diag
[2026-03-13 22:52:34] -rw-r--r--. 1 boincer umatlas        28 Mar 13 22:52 wrapper_checkpoint.txt
[2026-03-13 22:52:34] -rw-r--r--. 1 boincer umatlas      8192 Mar 13 22:52 boinc_mmap_file
[2026-03-13 22:52:34] -rw-r--r--. 1 boincer umatlas     23518 Mar 13 22:52 stderr.txt
[2026-03-13 22:52:34] HITS file was successfully produced:
[2026-03-13 22:52:34] -rw-------. 1 boincer umatlas 190452550 Mar 13 22:49 shared/HITS.pool.root.1
[2026-03-13 22:52:34]  *** Contents of shared directory: ***
[2026-03-13 22:52:34] total 618516
[2026-03-13 22:52:34] -rw-r--r--. 3 boincer umatlas 440334144 Mar 13 15:17 ATLAS.root_0
[2026-03-13 22:52:34] -rw-r--r--. 2 boincer umatlas     15845 Mar 13 15:17 start_atlas.sh
[2026-03-13 22:52:34] -rw-r--r--. 2 boincer umatlas    597528 Mar 13 15:17 input.tar.gz
[2026-03-13 22:52:34] -rw-------. 1 boincer umatlas 190452550 Mar 13 22:49 HITS.pool.root.1
[2026-03-13 22:52:34] -rw-------. 1 boincer umatlas   1945600 Mar 13 22:52 result.tar.gz
22:52:36 (451096): run_atlas exited; CPU time 31066.785361
22:52:36 (451096): called boinc_finish(0)

</stderr_txt>
]]>

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