Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:01:42 (27798): wrapper (7.7.26015): starting
05:01:42 (27798): wrapper: running run_atlas (--nthreads 8)
[2026-03-14 05:01:42] Arguments: --nthreads 8
[2026-03-14 05:01:42] Threads: 8
[2026-03-14 05:01:42] Checking for CVMFS
[2026-03-14 05:01:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 05:01:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 05:01:44] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 05:01:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 05:01:45] 2.11.2.0 27430 127070 133836 157263 3 93 23749561 25165824 1088 130560 158 37198379 99.832 26986402 1006 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-14 05:01:45] CVMFS is ok
[2026-03-14 05:01:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 05:01:45] Checking for apptainer binary...
[2026-03-14 05:01:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 05:01:46] Running /usr/bin/apptainer --version
[2026-03-14 05:01:46] apptainer version 1.3.2-1.el7
[2026-03-14 05:01:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 05:02:10] cg-vwn400.simple-grid.lan
[2026-03-14 05:02:10] apptainer works
[2026-03-14 05:02:10] Set ATHENA_PROC_NUMBER=8
[2026-03-14 05:02:10] Set ATHENA_CORE_NUMBER=8
[2026-03-14 05:02:10] Starting ATLAS job with PandaID=7044562033
[2026-03-14 05:02:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 09:05:14]  *** The last 200 lines of the pilot log: ***
[2026-03-14 09:05:14] 2026-03-14 08:04:31,185 | INFO     | log transfer has been attempted: DONE
[2026-03-14 09:05:14] 2026-03-14 08:04:31,185 | INFO     | job 7044562033 has finished - writing final server update
[2026-03-14 09:05:14] 2026-03-14 08:04:31,185 | INFO     | total number of processed events: 400 (read)
[2026-03-14 09:05:14] 2026-03-14 08:04:31,187 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-7044562033/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 09:05:14] 2026-03-14 08:04:31,188 | INFO     | extracted standard info from prmon json
[2026-03-14 09:05:14] 2026-03-14 08:04:31,188 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 09:05:14] 2026-03-14 08:04:31,188 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 09:05:14] 2026-03-14 08:04:31,188 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 09:05:14] 2026-03-14 08:04:31,189 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 09:05:14] 2026-03-14 08:04:31,193 | INFO     | fitting pss+swap vs Time
[2026-03-14 09:05:14] 2026-03-14 08:04:31,194 | INFO     | sum of square deviations: 3675146117.0
[2026-03-14 09:05:14] 2026-03-14 08:04:31,196 | INFO     | sum of deviations: 88046958481.99997
[2026-03-14 09:05:14] 2026-03-14 08:04:31,196 | INFO     | mean x: 1773468533.5
[2026-03-14 09:05:14] 2026-03-14 08:04:31,196 | INFO     | mean y: 2403552.947368421
[2026-03-14 09:05:14] 2026-03-14 08:04:31,196 | INFO     | intersect: -42485297715.8313
[2026-03-14 09:05:14] 2026-03-14 08:04:31,197 | INFO     | chi2: 8.037113245106621
[2026-03-14 09:05:14] 2026-03-14 08:04:31,197 | INFO     | sum of square deviations: 3438620752.0
[2026-03-14 09:05:14] 2026-03-14 08:04:31,199 | INFO     | sum of deviations: 116766563193.99998
[2026-03-14 09:05:14] 2026-03-14 08:04:31,199 | INFO     | mean x: 1773468381.0
[2026-03-14 09:05:14] 2026-03-14 08:04:31,200 | INFO     | mean y: 2421806.8430493274
[2026-03-14 09:05:14] 2026-03-14 08:04:31,200 | INFO     | intersect: -60219923929.35152
[2026-03-14 09:05:14] 2026-03-14 08:04:31,200 | INFO     | chi2: 6.479652491318143
[2026-03-14 09:05:14] 2026-03-14 08:04:31,200 | INFO     | current chi2=6.479652491318143 (change=19.378360193403203 %)
[2026-03-14 09:05:14] 2026-03-14 08:04:31,200 | INFO     | right removable region: 222
[2026-03-14 09:05:14] 2026-03-14 08:04:31,205 | INFO     | sum of square deviations: 3438620752.0
[2026-03-14 09:05:14] 2026-03-14 08:04:31,207 | INFO     | sum of deviations: 11554899075.000004
[2026-03-14 09:05:14] 2026-03-14 08:04:31,207 | INFO     | mean x: 1773468686.0
[2026-03-14 09:05:14] 2026-03-14 08:04:31,207 | INFO     | mean y: 2452841.6322869956
[2026-03-14 09:05:14] 2026-03-14 08:04:31,207 | INFO     | intersect: -5956986467.714053
[2026-03-14 09:05:14] 2026-03-14 08:04:31,208 | INFO     | chi2: 3.4118695611953984
[2026-03-14 09:05:14] 2026-03-14 08:04:31,208 | INFO     | current chi2=3.4118695611953984 (change=57.5485692792408 %)
[2026-03-14 09:05:14] 2026-03-14 08:04:31,208 | INFO     | sum of square deviations: 3212467674.5
[2026-03-14 09:05:14] 2026-03-14 08:04:31,210 | INFO     | sum of deviations: -32204983306.0
[2026-03-14 09:05:14] 2026-03-14 08:04:31,211 | INFO     | mean x: 1773468838.5
[2026-03-14 09:05:14] 2026-03-14 08:04:31,211 | INFO     | mean y: 2482210.3119266056
[2026-03-14 09:05:14] 2026-03-14 08:04:31,211 | INFO     | intersect: 17781504483.740166
[2026-03-14 09:05:14] 2026-03-14 08:04:31,211 | INFO     | chi2: 1.7937273541895724
[2026-03-14 09:05:14] 2026-03-14 08:04:31,211 | INFO     | current chi2=1.7937273541895724 (change=47.42684847655448 %)
[2026-03-14 09:05:14] 2026-03-14 08:04:31,212 | INFO     | sum of square deviations: 2996454322.0
[2026-03-14 09:05:14] 2026-03-14 08:04:31,214 | INFO     | sum of deviations: -39213141119.0
[2026-03-14 09:05:14] 2026-03-14 08:04:31,214 | INFO     | mean x: 1773468991.0
[2026-03-14 09:05:14] 2026-03-14 08:04:31,214 | INFO     | mean y: 2487107.96713615
[2026-03-14 09:05:14] 2026-03-14 08:04:31,214 | INFO     | intersect: 23211013700.1017
[2026-03-14 09:05:14] 2026-03-14 08:04:31,215 | INFO     | chi2: 1.7238323125350483
[2026-03-14 09:05:14] 2026-03-14 08:04:31,215 | INFO     | current chi2=1.7238323125350483 (change=3.8966368824822606 %)
[2026-03-14 09:05:14] 2026-03-14 08:04:31,215 | INFO     | left removable region: 30
[2026-03-14 09:05:14] 2026-03-14 08:04:31,215 | INFO     | sum of square deviations: 2194675568.0
[2026-03-14 09:05:14] 2026-03-14 08:04:31,217 | INFO     | sum of deviations: -7401228179.5
[2026-03-14 09:05:14] 2026-03-14 08:04:31,217 | INFO     | mean x: 1773469265.5
[2026-03-14 09:05:14] 2026-03-14 08:04:31,217 | INFO     | mean y: 2506859.671875
[2026-03-14 09:05:14] 2026-03-14 08:04:31,217 | INFO     | intersect: 5983277272.702584
[2026-03-14 09:05:14] 2026-03-14 08:04:31,217 | INFO     | chi2: 0.012733310498850294
[2026-03-14 09:05:14] 2026-03-14 08:04:31,218 | INFO     | current memory leak: -3.37 B/s (using 192 data points, chi2=0.01)
[2026-03-14 09:05:14] 2026-03-14 08:04:31,218 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-03-14 09:05:14] 2026-03-14 08:04:31,218 | INFO     | ..............................
[2026-03-14 09:05:14] 2026-03-14 08:04:31,219 | INFO     | . Timing measurements:
[2026-03-14 09:05:14] 2026-03-14 08:04:31,219 | INFO     | . get job = 0 s
[2026-03-14 09:05:14] 2026-03-14 08:04:31,219 | INFO     | . initial setup = 120 s
[2026-03-14 09:05:14] 2026-03-14 08:04:31,219 | INFO     | . payload setup = 150 s
[2026-03-14 09:05:14] 2026-03-14 08:04:31,219 | INFO     | . stage-in = 0 s
[2026-03-14 09:05:14] 2026-03-14 08:04:31,219 | INFO     | . payload execution = 13990 s
[2026-03-14 09:05:14] 2026-03-14 08:04:31,219 | INFO     | . stage-out = 3 s
[2026-03-14 09:05:14] 2026-03-14 08:04:31,219 | INFO     | . log creation = 1 s
[2026-03-14 09:05:14] 2026-03-14 08:04:31,219 | INFO     | ..............................
[2026-03-14 09:05:14] 2026-03-14 08:04:31,666 | INFO     | 
[2026-03-14 09:05:14] 2026-03-14 08:04:31,666 | INFO     | job summary report
[2026-03-14 09:05:14] 2026-03-14 08:04:31,666 | INFO     | --------------------------------------------------
[2026-03-14 09:05:14] 2026-03-14 08:04:31,666 | INFO     | PanDA job id: 7044562033
[2026-03-14 09:05:14] 2026-03-14 08:04:31,666 | INFO     | task id: 48955015
[2026-03-14 09:05:14] 2026-03-14 08:04:31,666 | INFO     | errors: (none)
[2026-03-14 09:05:14] 2026-03-14 08:04:31,666 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 09:05:14] 2026-03-14 08:04:31,666 | INFO     | pilot state: finished 
[2026-03-14 09:05:14] 2026-03-14 08:04:31,667 | INFO     | transexitcode: 0
[2026-03-14 09:05:14] 2026-03-14 08:04:31,667 | INFO     | exeerrorcode: 0
[2026-03-14 09:05:14] 2026-03-14 08:04:31,667 | INFO     | exeerrordiag: 
[2026-03-14 09:05:14] 2026-03-14 08:04:31,667 | INFO     | exitcode: 0
[2026-03-14 09:05:14] 2026-03-14 08:04:31,667 | INFO     | exitmsg: OK
[2026-03-14 09:05:14] 2026-03-14 08:04:31,667 | INFO     | cpuconsumptiontime: 50759 s
[2026-03-14 09:05:14] 2026-03-14 08:04:31,667 | INFO     | nevents: 400
[2026-03-14 09:05:14] 2026-03-14 08:04:31,667 | INFO     | neventsw: 0
[2026-03-14 09:05:14] 2026-03-14 08:04:31,667 | INFO     | pid: 3837
[2026-03-14 09:05:14] 2026-03-14 08:04:31,667 | INFO     | pgrp: 3837
[2026-03-14 09:05:14] 2026-03-14 08:04:31,668 | INFO     | corecount: 8
[2026-03-14 09:05:14] 2026-03-14 08:04:31,668 | INFO     | event service: False
[2026-03-14 09:05:14] 2026-03-14 08:04:31,668 | INFO     | sizes: {0: 2279148, 1: 2280207, 2: 2280295, 14144: 2310732, 14148: 2319732, 14149: 2320110}
[2026-03-14 09:05:14] 2026-03-14 08:04:31,668 | INFO     | --------------------------------------------------
[2026-03-14 09:05:14] 2026-03-14 08:04:31,668 | INFO     | 
[2026-03-14 09:05:14] 2026-03-14 08:04:31,668 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2026-03-14 09:05:14] 2026-03-14 08:04:32,135 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 09:05:14] 2026-03-14 08:04:32,135 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 09:05:14] 2026-03-14 08:04:32,136 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 09:05:14] 2026-03-14 08:04:32,136 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 09:05:14] 2026-03-14 08:04:32,136 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 09:05:14] 2026-03-14 08:04:32,136 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 09:05:14] 2026-03-14 08:04:32,136 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 09:05:14] 2026-03-14 08:04:32,136 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 09:05:14] 2026-03-14 08:04:32,136 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 09:05:14] 2026-03-14 08:04:32,136 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 09:05:14] 2026-03-14 08:04:32,137 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 09:05:14] 2026-03-14 08:04:32,137 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 09:05:14] 2026-03-14 08:04:32,137 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 09:05:14] 2026-03-14 08:04:32,137 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 09:05:14] 2026-03-14 08:04:32,137 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 09:05:14] 2026-03-14 08:04:32,137 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 09:05:14] 2026-03-14 08:04:32,137 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 09:05:14] 2026-03-14 08:04:32,137 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 09:05:14] 2026-03-14 08:04:32,138 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 09:05:14] 2026-03-14 08:04:32,138 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 09:05:14] 2026-03-14 08:04:32,138 | INFO     | job 7044562033 has completed (purged errors)
[2026-03-14 09:05:14] 2026-03-14 08:04:32,138 | INFO     | overall cleanup function is called
[2026-03-14 09:05:14] 2026-03-14 08:04:33,147 | INFO     | --- collectZombieJob: --- 10, [3837]
[2026-03-14 09:05:14] 2026-03-14 08:04:33,147 | INFO     | zombie collector waiting for pid 3837
[2026-03-14 09:05:14] 2026-03-14 08:04:33,147 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 09:05:14] 2026-03-14 08:04:33,147 | INFO     | collected zombie processes
[2026-03-14 09:05:14] 2026-03-14 08:04:33,147 | INFO     | will attempt to kill all subprocesses of pid=3837
[2026-03-14 09:05:14] 2026-03-14 08:04:33,247 | INFO     | process IDs to be killed: [3837] (in reverse order)
[2026-03-14 09:05:14] 2026-03-14 08:04:34,270 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 09:05:14] 2026-03-14 08:04:34,271 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 09:05:14] 2026-03-14 08:04:34,273 | INFO     | did not find any defunct processes belonging to 3837
[2026-03-14 09:05:14] 2026-03-14 08:04:34,274 | INFO     | did not find any defunct processes belonging to 3837
[2026-03-14 09:05:14] 2026-03-14 08:04:34,275 | INFO     | ready for new job
[2026-03-14 09:05:14] 2026-03-14 08:04:34,275 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 09:05:14] 2026-03-14 08:04:34,277 | INFO     | **************************************
[2026-03-14 09:05:14] 2026-03-14 08:04:34,277 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 09:05:14] 2026-03-14 08:04:34,277 | INFO     | **************************************
[2026-03-14 09:05:14] 2026-03-14 08:04:34,277 | INFO     | 
[2026-03-14 09:05:14] 2026-03-14 08:04:34,278 | INFO     | pilot is running in a VM
[2026-03-14 09:05:14] 2026-03-14 08:04:34,278 | INFO     | architecture information:
[2026-03-14 09:05:14] 2026-03-14 08:04:34,289 | INFO     | executing command: cat /etc/os-release
[2026-03-14 09:05:14] 2026-03-14 08:04:34,588 | INFO     | cat /etc/os-release:
[2026-03-14 09:05:14] NAME="CentOS Linux"
[2026-03-14 09:05:14] VERSION="7 (Core)"
[2026-03-14 09:05:14] ID="centos"
[2026-03-14 09:05:14] ID_LIKE="rhel fedora"
[2026-03-14 09:05:14] VERSION_ID="7"
[2026-03-14 09:05:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 09:05:14] ANSI_COLOR="0;31"
[2026-03-14 09:05:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 09:05:14] HOME_URL="https://www.centos.org/"
[2026-03-14 09:05:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 09:05:14] 
[2026-03-14 09:05:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 09:05:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 09:05:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 09:05:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 09:05:14] 
[2026-03-14 09:05:14] 2026-03-14 08:04:34,589 | INFO     | **************************************
[2026-03-14 09:05:14] 2026-03-14 08:04:35,092 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2026-03-14 09:05:14] 2026-03-14 08:04:35,329 | INFO     | sufficient remaining disk space (494851325952 B)
[2026-03-14 09:05:14] 2026-03-14 08:04:35,330 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 09:05:14] 2026-03-14 08:04:35,330 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 09:05:14] 2026-03-14 08:04:35,330 | INFO     | update_server=False
[2026-03-14 09:05:14] 2026-03-14 08:04:35,330 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 09:05:14] 2026-03-14 08:04:35,331 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 09:05:14] 2026-03-14 08:04:35,331 | INFO     | aborting loop
[2026-03-14 09:05:14] 2026-03-14 08:04:35,843 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 09:05:14] 2026-03-14 08:04:35,945 | INFO     | all data control threads have been joined
[2026-03-14 09:05:14] 2026-03-14 08:04:36,090 | INFO     | all payload control threads have been joined
[2026-03-14 09:05:14] 2026-03-14 08:04:36,200 | INFO     | all job control threads have been joined
[2026-03-14 09:05:14] 2026-03-14 08:04:36,336 | INFO     | [job] retrieve thread has finished
[2026-03-14 09:05:14] 2026-03-14 08:04:36,337 | INFO     | [job] job monitor thread has finished
[2026-03-14 09:05:14] 2026-03-14 08:04:36,388 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 09:05:14] 2026-03-14 08:04:36,455 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 09:05:14] 2026-03-14 08:04:36,892 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 09:05:14] 2026-03-14 08:04:36,951 | INFO     | [data] control thread has finished
[2026-03-14 09:05:14] 2026-03-14 08:04:37,057 | INFO     | [payload] validate_post thread has finished
[2026-03-14 09:05:14] 2026-03-14 08:04:37,096 | INFO     | [payload] control thread has finished
[2026-03-14 09:05:14] 2026-03-14 08:04:37,201 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 09:05:14] 2026-03-14 08:04:37,202 | INFO     | [data] copytool_in thread has finished
[2026-03-14 09:05:14] 2026-03-14 08:04:37,206 | INFO     | [job] control thread has finished
[2026-03-14 09:05:14] 2026-03-14 08:04:37,397 | INFO     | [job] queue monitor thread has finished
[2026-03-14 09:05:14] 2026-03-14 08:04:37,402 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 09:05:14] 2026-03-14 08:04:37,506 | INFO     | [payload] failed_post thread has finished
[2026-03-14 09:05:14] 2026-03-14 08:04:37,752 | INFO     | [job] validate thread has finished
[2026-03-14 09:05:14] 2026-03-14 08:04:37,793 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 09:05:14] 2026-03-14 08:04:37,850 | INFO     | [data] copytool_out thread has finished
[2026-03-14 09:05:14] 2026-03-14 08:04:40,464 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 09:05:14] 2026-03-14 08:05:03,083 | INFO     | [monitor] cgroup control has ended
[2026-03-14 09:05:14] 2026-03-14 08:05:03,810 | INFO     | PID=31781 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-14 09:05:14] 2026-03-14 08:05:03,810 | INFO     | .. there are 2 such processes running
[2026-03-14 09:05:14] 2026-03-14 08:05:03,810 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 09:05:14] 2026-03-14 08:05:03,810 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 09:05:14] 2026-03-14 08:05:03,811 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 09:05:14] 2026-03-14 08:05:03,958 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140543980504896)>', '<ExcThread(monitor, started 140543401125632)>']
[2026-03-14 09:05:14] 2026-03-14 08:05:04,817 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 09:05:14] 2026-03-14 08:05:04,817 | INFO     | [monitor] control thread has ended
[2026-03-14 09:05:14] 2026-03-14 08:05:08,984 | INFO     | all workflow threads have been joined
[2026-03-14 09:05:14] 2026-03-14 08:05:08,984 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 09:05:14] 2026-03-14 08:05:08,984 | INFO     | traces error code: 0
[2026-03-14 09:05:14] 2026-03-14 08:05:08,984 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 09:05:14] 2026-03-14 08:05:09,454 [wrapper] ==== pilot stdout END ====
[2026-03-14 09:05:14] 2026-03-14 08:05:09,579 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 09:05:14] 2026-03-14 08:05:09,651 [wrapper] pilotpid: 31781
[2026-03-14 09:05:14] 2026-03-14 08:05:09,686 [wrapper] Pilot exit status: 0
[2026-03-14 09:05:14] 2026-03-14 08:05:10,179 [wrapper] pandaids: 7044562033
[2026-03-14 09:05:14] 2026-03-14 08:05:11,107 [wrapper] cleanup supervisor_pilot 10584 31782
[2026-03-14 09:05:14] 2026-03-14 08:05:11,221 [wrapper] Test setup, not cleaning
[2026-03-14 09:05:14] 2026-03-14 08:05:11,331 [wrapper] apfmon messages muted
[2026-03-14 09:05:14] 2026-03-14 08:05:11,414 [wrapper] ==== wrapper stdout END ====
[2026-03-14 09:05:14] 2026-03-14 08:05:11,515 [wrapper] ==== wrapper stderr END ====
[2026-03-14 09:05:14]  *** Error codes and diagnostics ***
[2026-03-14 09:05:14]     "exeErrorCode": 0,
[2026-03-14 09:05:14]     "exeErrorDiag": "",
[2026-03-14 09:05:14]     "pilotErrorCode": 0,
[2026-03-14 09:05:14]     "pilotErrorDiag": "",
[2026-03-14 09:05:14]  *** Listing of results directory ***
[2026-03-14 09:05:14] total 612964
[2026-03-14 09:05:14] -rw-r--r--. 1 boinc boinc    585013 Mar 13 16:07 pilot3.tar.gz
[2026-03-14 09:05:14] -rwx------. 1 boinc boinc     36322 Mar 13 16:07 runpilot2-wrapper.sh
[2026-03-14 09:05:14] -rw-r--r--. 1 boinc boinc      5111 Mar 13 16:09 queuedata.json
[2026-03-14 09:05:14] -rw-r--r--. 1 boinc boinc       100 Mar 14 05:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 09:05:14] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 05:01 run_atlas
[2026-03-14 09:05:14] -rw-r--r--. 1 boinc boinc       105 Mar 14 05:01 job.xml
[2026-03-14 09:05:14] -rw-r--r--. 2 boinc boinc 440583960 Mar 14 05:01 EVNT.46701403._002393.pool.root.1
[2026-03-14 09:05:14] -rw-r--r--. 1 boinc boinc      6392 Mar 14 05:01 init_data.xml
[2026-03-14 09:05:14] -rw-r--r--. 2 boinc boinc     15845 Mar 14 05:01 start_atlas.sh
[2026-03-14 09:05:14] drwxrwx--x. 2 boinc boinc        68 Mar 14 05:01 shared
[2026-03-14 09:05:14] -rw-r--r--. 2 boinc boinc    597535 Mar 14 05:01 input.tar.gz
[2026-03-14 09:05:14] -rw-r--r--. 1 boinc boinc         0 Mar 14 05:01 boinc_lockfile
[2026-03-14 09:05:14] -rw-r--r--. 1 boinc boinc      2572 Mar 14 05:02 pandaJob.out
[2026-03-14 09:05:14] -rw-------. 1 boinc boinc       415 Mar 14 05:08 workernode_map.json
[2026-03-14 09:05:14] -rw-------. 1 boinc boinc   1004579 Mar 14 05:08 agis_schedconf.cvmfs.json
[2026-03-14 09:05:14] drwx------. 5 boinc boinc      4096 Mar 14 05:08 pilot3
[2026-03-14 09:05:14] -rw-------. 1 boinc boinc 178231598 Mar 14 09:03 HITS.48955015._016931.pool.root.1
[2026-03-14 09:05:14] -rw-r--r--. 1 boinc boinc       531 Mar 14 09:03 boinc_task_state.xml
[2026-03-14 09:05:14] -rw-------. 1 boinc boinc      1012 Mar 14 09:04 memory_monitor_summary.json
[2026-03-14 09:05:14] -rw-------. 1 boinc boinc   1511579 Mar 14 09:04 agis_ddmendpoints.agis.ALL.json
[2026-03-14 09:05:14] -rw-------. 1 boinc boinc    476131 Mar 14 09:04 log.48955015._016931.job.log.tgz.1
[2026-03-14 09:05:14] -rw-------. 1 boinc boinc        95 Mar 14 09:04 pilot_heartbeat.json
[2026-03-14 09:05:14] -rw-------. 1 boinc boinc      6325 Mar 14 09:04 heartbeat.json
[2026-03-14 09:05:14] -rw-r--r--. 1 boinc boinc      8192 Mar 14 09:04 boinc_mmap_file
[2026-03-14 09:05:14] -rw-r--r--. 1 boinc boinc        28 Mar 14 09:04 wrapper_checkpoint.txt
[2026-03-14 09:05:14] -rw-------. 1 boinc boinc      4881 Mar 14 09:05 pilotlog.txt
[2026-03-14 09:05:14] -rw-------. 1 boinc boinc   1989849 Mar 14 09:05 log.48955015._016931.job.log.1
[2026-03-14 09:05:14] -rw-------. 1 boinc boinc       357 Mar 14 09:05 output.list
[2026-03-14 09:05:14] -rw-r--r--. 1 boinc boinc       620 Mar 14 09:05 runtime_log
[2026-03-14 09:05:14] -rw-------. 1 boinc boinc   2488320 Mar 14 09:05 result.tar.gz
[2026-03-14 09:05:14] -rw-------. 1 boinc boinc       656 Mar 14 09:05 Tk9KDmDIJL9n9Rq4apOajLDm4fhM0noT9bVooX4SDm0JnLDm2RW2sn.diag
[2026-03-14 09:05:14] -rw-r--r--. 1 boinc boinc      8832 Mar 14 09:05 runtime_log.err
[2026-03-14 09:05:14] -rw-r--r--. 1 boinc boinc     20667 Mar 14 09:05 stderr.txt
[2026-03-14 09:05:14] HITS file was successfully produced:
[2026-03-14 09:05:14] -rw-------. 1 boinc boinc 178231598 Mar 14 09:03 shared/HITS.pool.root.1
[2026-03-14 09:05:14]  *** Contents of shared directory: ***
[2026-03-14 09:05:14] total 607348
[2026-03-14 09:05:14] -rw-r--r--. 2 boinc boinc 440583960 Mar 14 05:01 ATLAS.root_0
[2026-03-14 09:05:14] -rw-r--r--. 2 boinc boinc     15845 Mar 14 05:01 start_atlas.sh
[2026-03-14 09:05:14] -rw-r--r--. 2 boinc boinc    597535 Mar 14 05:01 input.tar.gz
[2026-03-14 09:05:14] -rw-------. 1 boinc boinc 178231598 Mar 14 09:03 HITS.pool.root.1
[2026-03-14 09:05:14] -rw-------. 1 boinc boinc   2488320 Mar 14 09:05 result.tar.gz
09:05:16 (27798): run_atlas exited; CPU time 50919.097009
09:05:16 (27798): called boinc_finish(0)

</stderr_txt>
]]>

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