Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:51:35 (3061840): wrapper (7.7.26015): starting
14:51:35 (3061840): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 14:51:35] Arguments: --nthreads 8
[2026-03-13 14:51:35] Threads: 8
[2026-03-13 14:51:35] Checking for CVMFS
[2026-03-13 14:51:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 14:51:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 14:51:36] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 14:51:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 14:51:36] 2.13.3.0 5782 111865 361152 157250 3 283 34244036 40960000 11312 16776704 0 192342031 99.600 206243586 39797 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-13 14:51:36] CVMFS is ok
[2026-03-13 14:51:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 14:51:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 14:51:36] Further information can be found at the LHC@home message board.
[2026-03-13 14:51:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 14:51:36] Checking for apptainer binary...
[2026-03-13 14:51:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 14:51:36] Running /usr/bin/apptainer --version
[2026-03-13 14:51:36] apptainer version 1.4.5-2.el9
[2026-03-13 14:51:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 14:51:36] c-206-39.aglt2.org
[2026-03-13 14:51:36] apptainer works
[2026-03-13 14:51:36] Set ATHENA_PROC_NUMBER=8
[2026-03-13 14:51:36] Set ATHENA_CORE_NUMBER=8
[2026-03-13 14:51:36] Starting ATLAS job with PandaID=7044333739
[2026-03-13 14:51:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 16:06:05]  *** The last 200 lines of the pilot log: ***
[2026-03-13 16:06:05]  lfn=log.48955010._031153.job.log.tgz.1
[2026-03-13 16:06:05]  mtime=0
[2026-03-13 16:06:05]  protocol_id=None
[2026-03-13 16:06:05]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-13 16:06:05]  replicas=None
[2026-03-13 16:06:05]  scope=mc23_13p6TeV
[2026-03-13 16:06:05]  status=None
[2026-03-13 16:06:05]  status_code=0
[2026-03-13 16:06:05]  storage_token=
[2026-03-13 16:06:05]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-7044333739/log.48955010._031153.job.log.tgz.1
[2026-03-13 16:06:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0f/04/log.48955010._031153.job.log.tgz.1
[2026-03-13 16:06:05]  workdir=None
[2026-03-13 16:06:05] ]
[2026-03-13 16:06:05] 2026-03-13 20:04:54,247 | INFO     | transferring file log.48955010._031153.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-7044333739/log.48955010._031153.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-13 16:06:05] 2026-03-13 20:04:54,247 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-7044333739/log.48955010._031153.job.log.tgz.1 /tmp/boinchome/slots/2/log.48955010._031153.job
[2026-03-13 16:06:05] 2026-03-13 20:04:54,341 | INFO     | adding to output.list: log.48955010._031153.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0f/04/log.48955010._031153.job.log.tg
[2026-03-13 16:06:05] 2026-03-13 20:04:54,342 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-13 16:06:05] 2026-03-13 20:04:54,342 | INFO     | summary of transferred files:
[2026-03-13 16:06:05] 2026-03-13 20:04:54,342 | INFO     |  -- lfn=log.48955010._031153.job.log.tgz.1, status_code=0, status=transferred
[2026-03-13 16:06:05] 2026-03-13 20:04:54,342 | INFO     | stage-out finished correctly
[2026-03-13 16:06:05] 2026-03-13 20:04:54,556 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-13 16:06:05] 2026-03-13 20:04:55,115 | INFO     | job 7044333739 has state=finished
[2026-03-13 16:06:05] 2026-03-13 20:04:55,115 | INFO     | preparing for final server update for job 7044333739 in state='finished'
[2026-03-13 16:06:05] 2026-03-13 20:04:55,115 | INFO     | reading metadata from: /tmp/boinchome/slots/2/PanDA_Pilot-7044333739/jobReport.json
[2026-03-13 16:06:05] 2026-03-13 20:04:55,122 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-03-13 16:06:05] 2026-03-13 20:04:55,122 | INFO     | this job has now completed (state=finished)
[2026-03-13 16:06:05] 2026-03-13 20:04:55,122 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-13 16:06:05] 2026-03-13 20:04:55,122 | INFO     | log transfer has been attempted: DONE
[2026-03-13 16:06:05] 2026-03-13 20:04:55,122 | INFO     | job 7044333739 has finished - writing final server update
[2026-03-13 16:06:05] 2026-03-13 20:04:55,123 | INFO     | total number of processed events: 400 (read)
[2026-03-13 16:06:05] 2026-03-13 20:04:55,144 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7044333739/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 16:06:05] 2026-03-13 20:04:55,144 | INFO     | extracted standard info from prmon json
[2026-03-13 16:06:05] 2026-03-13 20:04:55,145 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 16:06:05] 2026-03-13 20:04:55,145 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 16:06:05] 2026-03-13 20:04:55,145 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 16:06:05] 2026-03-13 20:04:55,145 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 16:06:05] 2026-03-13 20:04:55,146 | INFO     | fitting pss+swap vs Time
[2026-03-13 16:06:05] 2026-03-13 20:04:55,147 | INFO     | sum of square deviations: 85136480.0
[2026-03-13 16:06:05] 2026-03-13 20:04:55,147 | INFO     | sum of deviations: -1042935788.0000001
[2026-03-13 16:06:05] 2026-03-13 20:04:55,147 | INFO     | mean x: 1773430190.0
[2026-03-13 16:06:05] 2026-03-13 20:04:55,147 | INFO     | mean y: 2526020.630769231
[2026-03-13 16:06:05] 2026-03-13 20:04:55,147 | INFO     | intersect: 21727335557.86604
[2026-03-13 16:06:05] 2026-03-13 20:04:55,147 | INFO     | chi2: 0.004104668129405506
[2026-03-13 16:06:05] 2026-03-13 20:04:55,147 | INFO     | current memory leak: -12.25 B/s (using 65 data points, chi2=0.00)
[2026-03-13 16:06:05] 2026-03-13 20:04:55,148 | INFO     | could have reported an average CPU frequency of 3207 MHz (6 samples)
[2026-03-13 16:06:05] 2026-03-13 20:04:55,148 | INFO     | ..............................
[2026-03-13 16:06:05] 2026-03-13 20:04:55,148 | INFO     | . Timing measurements:
[2026-03-13 16:06:05] 2026-03-13 20:04:55,148 | INFO     | . get job = 0 s
[2026-03-13 16:06:05] 2026-03-13 20:04:55,148 | INFO     | . initial setup = 6 s
[2026-03-13 16:06:05] 2026-03-13 20:04:55,148 | INFO     | . payload setup = 5 s
[2026-03-13 16:06:05] 2026-03-13 20:04:55,148 | INFO     | . stage-in = 0 s
[2026-03-13 16:06:05] 2026-03-13 20:04:55,148 | INFO     | . payload execution = 4360 s
[2026-03-13 16:06:05] 2026-03-13 20:04:55,148 | INFO     | . stage-out = 1 s
[2026-03-13 16:06:05] 2026-03-13 20:04:55,148 | INFO     | . log creation = 0 s
[2026-03-13 16:06:05] 2026-03-13 20:04:55,148 | INFO     | ..............................
[2026-03-13 16:06:05] 2026-03-13 20:04:55,389 | INFO     | 
[2026-03-13 16:06:05] 2026-03-13 20:04:55,389 | INFO     | job summary report
[2026-03-13 16:06:05] 2026-03-13 20:04:55,389 | INFO     | --------------------------------------------------
[2026-03-13 16:06:05] 2026-03-13 20:04:55,389 | INFO     | PanDA job id: 7044333739
[2026-03-13 16:06:05] 2026-03-13 20:04:55,389 | INFO     | task id: 48955010
[2026-03-13 16:06:05] 2026-03-13 20:04:55,389 | INFO     | errors: (none)
[2026-03-13 16:06:05] 2026-03-13 20:04:55,389 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 16:06:05] 2026-03-13 20:04:55,389 | INFO     | pilot state: finished 
[2026-03-13 16:06:05] 2026-03-13 20:04:55,390 | INFO     | transexitcode: 0
[2026-03-13 16:06:05] 2026-03-13 20:04:55,390 | INFO     | exeerrorcode: 0
[2026-03-13 16:06:05] 2026-03-13 20:04:55,390 | INFO     | exeerrordiag: 
[2026-03-13 16:06:05] 2026-03-13 20:04:55,390 | INFO     | exitcode: 0
[2026-03-13 16:06:05] 2026-03-13 20:04:55,390 | INFO     | exitmsg: OK
[2026-03-13 16:06:05] 2026-03-13 20:04:55,390 | INFO     | cpuconsumptiontime: 31137 s
[2026-03-13 16:06:05] 2026-03-13 20:04:55,390 | INFO     | nevents: 400
[2026-03-13 16:06:05] 2026-03-13 20:04:55,390 | INFO     | neventsw: 0
[2026-03-13 16:06:05] 2026-03-13 20:04:55,390 | INFO     | pid: 3070420
[2026-03-13 16:06:05] 2026-03-13 20:04:55,390 | INFO     | pgrp: 3070420
[2026-03-13 16:06:05] 2026-03-13 20:04:55,390 | INFO     | corecount: 8
[2026-03-13 16:06:05] 2026-03-13 20:04:55,390 | INFO     | event service: False
[2026-03-13 16:06:05] 2026-03-13 20:04:55,390 | INFO     | sizes: {0: 2279091, 1: 2280209, 12: 2280209, 4369: 2306446, 4371: 2315500, 4372: 2315638}
[2026-03-13 16:06:05] 2026-03-13 20:04:55,390 | INFO     | --------------------------------------------------
[2026-03-13 16:06:05] 2026-03-13 20:04:55,391 | INFO     | 
[2026-03-13 16:06:05] 2026-03-13 20:04:55,391 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-13 16:06:05] 2026-03-13 20:04:55,424 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 16:06:05] 2026-03-13 20:04:55,424 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 16:06:05] 2026-03-13 20:04:55,425 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 16:06:05] 2026-03-13 20:04:55,425 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 16:06:05] 2026-03-13 20:04:55,425 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 16:06:05] 2026-03-13 20:04:55,425 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 16:06:05] 2026-03-13 20:04:55,425 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 16:06:05] 2026-03-13 20:04:55,425 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 16:06:05] 2026-03-13 20:04:55,425 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 16:06:05] 2026-03-13 20:04:55,425 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 16:06:05] 2026-03-13 20:04:55,425 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 16:06:05] 2026-03-13 20:04:55,425 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 16:06:05] 2026-03-13 20:04:55,425 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 16:06:05] 2026-03-13 20:04:55,425 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 16:06:05] 2026-03-13 20:04:55,426 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 16:06:05] 2026-03-13 20:04:55,426 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 16:06:05] 2026-03-13 20:04:55,426 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 16:06:05] 2026-03-13 20:04:55,426 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 16:06:05] 2026-03-13 20:04:55,426 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 16:06:05] 2026-03-13 20:04:55,426 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 16:06:05] 2026-03-13 20:04:55,426 | INFO     | job 7044333739 has completed (purged errors)
[2026-03-13 16:06:05] 2026-03-13 20:04:55,426 | INFO     | overall cleanup function is called
[2026-03-13 16:06:05] 2026-03-13 20:04:55,937 | INFO     | PID=3065629 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-13 16:06:05] 2026-03-13 20:04:55,937 | INFO     | .. there are 21 such processes running
[2026-03-13 16:06:05] 2026-03-13 20:04:56,436 | INFO     | --- collectZombieJob: --- 10, [3070420]
[2026-03-13 16:06:05] 2026-03-13 20:04:56,436 | INFO     | zombie collector waiting for pid 3070420
[2026-03-13 16:06:05] 2026-03-13 20:04:56,436 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 16:06:05] 2026-03-13 20:04:56,436 | INFO     | collected zombie processes
[2026-03-13 16:06:05] 2026-03-13 20:04:56,436 | INFO     | will attempt to kill all subprocesses of pid=3070420
[2026-03-13 16:06:05] 2026-03-13 20:04:57,660 | INFO     | process IDs to be killed: [3070420] (in reverse order)
[2026-03-13 16:06:05] 2026-03-13 20:04:57,905 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 16:06:05] 2026-03-13 20:04:57,906 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 16:06:05] 2026-03-13 20:04:57,987 | INFO     | did not find any defunct processes belonging to 3070420
[2026-03-13 16:06:05] 2026-03-13 20:04:58,072 | INFO     | did not find any defunct processes belonging to 3070420
[2026-03-13 16:06:05] 2026-03-13 20:04:58,072 | INFO     | ready for new job
[2026-03-13 16:06:05] 2026-03-13 20:04:58,072 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 16:06:05] 2026-03-13 20:04:58,076 | INFO     | **************************************
[2026-03-13 16:06:05] 2026-03-13 20:04:58,109 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 16:06:05] 2026-03-13 20:04:58,110 | INFO     | **************************************
[2026-03-13 16:06:05] 2026-03-13 20:04:58,110 | INFO     | 
[2026-03-13 16:06:05] 2026-03-13 20:04:58,129 | INFO     | architecture information:
[2026-03-13 16:06:05] 2026-03-13 20:04:58,129 | INFO     | executing command: cat /etc/os-release
[2026-03-13 16:06:05] 2026-03-13 20:04:58,186 | INFO     | cat /etc/os-release:
[2026-03-13 16:06:05] NAME="CentOS Linux"
[2026-03-13 16:06:05] VERSION="7 (Core)"
[2026-03-13 16:06:05] ID="centos"
[2026-03-13 16:06:05] ID_LIKE="rhel fedora"
[2026-03-13 16:06:05] VERSION_ID="7"
[2026-03-13 16:06:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 16:06:05] ANSI_COLOR="0;31"
[2026-03-13 16:06:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 16:06:05] HOME_URL="https://www.centos.org/"
[2026-03-13 16:06:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 16:06:05] 
[2026-03-13 16:06:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 16:06:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 16:06:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 16:06:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 16:06:05] 
[2026-03-13 16:06:05] 2026-03-13 20:04:58,186 | INFO     | **************************************
[2026-03-13 16:06:05] 2026-03-13 20:04:58,193 | WARNING  | process 3070420 can no longer be monitored (due to stat problems) - aborting
[2026-03-13 16:06:05] 2026-03-13 20:04:58,502 | INFO     | using path: /tmp/boinchome/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 16:06:05] 2026-03-13 20:04:58,503 | INFO     | using path: /tmp/boinchome/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 16:06:05] 2026-03-13 20:04:58,503 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-13 16:06:05] 2026-03-13 20:04:58,503 | WARNING  | maxPSS not found in memory monitor output
[2026-03-13 16:06:05] 2026-03-13 20:04:58,719 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-13 16:06:05] 2026-03-13 20:04:58,793 | INFO     | sufficient remaining disk space (80064020480 B)
[2026-03-13 16:06:05] 2026-03-13 20:04:58,793 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 16:06:05] 2026-03-13 20:04:58,794 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 16:06:05] 2026-03-13 20:04:58,794 | INFO     | update_server=False
[2026-03-13 16:06:05] 2026-03-13 20:04:58,794 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 16:06:05] 2026-03-13 20:04:58,823 | INFO     | all data control threads have been joined
[2026-03-13 16:06:05] 2026-03-13 20:04:59,263 | INFO     | number of running child processes to parent process 3070420: 1
[2026-03-13 16:06:05] 2026-03-13 20:04:59,263 | INFO     | maximum number of monitored processes: 6
[2026-03-13 16:06:05] 2026-03-13 20:04:59,263 | INFO     | aborting job monitoring since job object (job id=7044333739) has expired
[2026-03-13 16:06:05] 2026-03-13 20:04:59,263 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 16:06:05] 2026-03-13 20:04:59,263 | INFO     | will abort loop
[2026-03-13 16:06:05] 2026-03-13 20:04:59,810 | INFO     | [job] retrieve thread has finished
[2026-03-13 16:06:05] 2026-03-13 20:04:59,829 | INFO     | [data] control thread has finished
[2026-03-13 16:06:05] 2026-03-13 20:05:00,177 | INFO     | all job control threads have been joined
[2026-03-13 16:06:05] 2026-03-13 20:05:00,181 | INFO     | all payload control threads have been joined
[2026-03-13 16:06:05] 2026-03-13 20:05:00,198 | INFO     | [data] copytool_in thread has finished
[2026-03-13 16:06:05] 2026-03-13 20:05:00,220 | INFO     | [payload] validate_post thread has finished
[2026-03-13 16:06:05] 2026-03-13 20:05:00,233 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 16:06:05] 2026-03-13 20:05:00,269 | INFO     | [job] job monitor thread has finished
[2026-03-13 16:06:05] 2026-03-13 20:05:00,415 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 16:06:05] 2026-03-13 20:05:00,651 | INFO     | [job] validate thread has finished
[2026-03-13 16:06:05] 2026-03-13 20:05:00,809 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 16:06:05] 2026-03-13 20:05:00,851 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 16:06:05] 2026-03-13 20:05:00,919 | INFO     | [payload] failed_post thread has finished
[2026-03-13 16:06:05] 2026-03-13 20:05:01,184 | INFO     | [job] control thread has finished
[2026-03-13 16:06:05] 2026-03-13 20:05:01,187 | INFO     | [payload] control thread has finished
[2026-03-13 16:06:05] 2026-03-13 20:05:01,243 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 16:06:05] 2026-03-13 20:05:01,265 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 16:06:05] 2026-03-13 20:05:01,270 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 16:06:05] 2026-03-13 20:05:01,421 | INFO     | [job] queue monitor thread has finished
[2026-03-13 16:06:05] 2026-03-13 20:05:02,243 | INFO     | [data] copytool_out thread has finished
[2026-03-13 16:06:05] 2026-03-13 20:05:04,817 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 16:06:05] 2026-03-13 20:05:28,651 | INFO     | PID=3065629 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-13 16:06:05] 2026-03-13 20:05:28,651 | INFO     | .. there are 21 such processes running
[2026-03-13 16:06:05] 2026-03-13 20:05:28,652 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 16:06:05] 2026-03-13 20:05:28,653 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 16:06:05] 2026-03-13 20:05:28,653 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 16:06:05] 2026-03-13 20:05:58,871 | INFO     | [monitor] cgroup control has ended
[2026-03-13 16:06:05] 2026-03-13 20:05:59,311 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140323964983104)>', '<ExcThread(monitor, started 140323586025216)>']
[2026-03-13 16:06:05] 2026-03-13 20:05:59,873 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 16:06:05] 2026-03-13 20:05:59,873 | INFO     | [monitor] control thread has ended
[2026-03-13 16:06:05] 2026-03-13 20:06:04,337 | INFO     | all workflow threads have been joined
[2026-03-13 16:06:05] 2026-03-13 20:06:04,337 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 16:06:05] 2026-03-13 20:06:04,337 | INFO     | traces error code: 0
[2026-03-13 16:06:05] 2026-03-13 20:06:04,337 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 16:06:05] 2026-03-13 20:06:04,528 [wrapper] ==== pilot stdout END ====
[2026-03-13 16:06:05] 2026-03-13 20:06:04,567 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 16:06:05] 2026-03-13 20:06:04,602 [wrapper] pilotpid: 3065629
[2026-03-13 16:06:05] 2026-03-13 20:06:04,629 [wrapper] Pilot exit status: 0
[2026-03-13 16:06:05] 2026-03-13 20:06:04,807 [wrapper] pandaids: 7044333739
[2026-03-13 16:06:05] 2026-03-13 20:06:04,996 [wrapper] cleanup supervisor_pilot 3209951 3065630
[2026-03-13 16:06:05] 2026-03-13 20:06:05,002 [wrapper] Test setup, not cleaning
[2026-03-13 16:06:05] 2026-03-13 20:06:05,004 [wrapper] apfmon messages muted
[2026-03-13 16:06:05] 2026-03-13 20:06:05,008 [wrapper] ==== wrapper stdout END ====
[2026-03-13 16:06:05] 2026-03-13 20:06:05,011 [wrapper] ==== wrapper stderr END ====
[2026-03-13 16:06:05]  *** Error codes and diagnostics ***
[2026-03-13 16:06:05]     "exeErrorCode": 0,
[2026-03-13 16:06:05]     "exeErrorDiag": "",
[2026-03-13 16:06:05]     "pilotErrorCode": 0,
[2026-03-13 16:06:05]     "pilotErrorDiag": "",
[2026-03-13 16:06:05]  *** Listing of results directory ***
[2026-03-13 16:06:05] total 614604
[2026-03-13 16:06:05] -rw-r--r--. 1 boincer umatlas    585013 Mar 13 09:59 pilot3.tar.gz
[2026-03-13 16:06:05] -rw-r--r--. 1 boincer umatlas      5111 Mar 13 10:00 queuedata.json
[2026-03-13 16:06:05] -rwx------. 1 boincer umatlas     36322 Mar 13 10:00 runpilot2-wrapper.sh
[2026-03-13 16:06:05] -rw-r--r--. 1 boincer umatlas       100 Mar 13 14:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 16:06:05] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 13 14:51 run_atlas
[2026-03-13 16:06:05] -rw-r--r--. 1 boincer umatlas       105 Mar 13 14:51 job.xml
[2026-03-13 16:06:05] -rw-r--r--. 2 boincer umatlas 436764592 Mar 13 14:51 EVNT.46701403._001617.pool.root.1
[2026-03-13 16:06:05] -rw-r--r--. 2 boincer umatlas     15845 Mar 13 14:51 start_atlas.sh
[2026-03-13 16:06:05] drwxrwx--x. 2 boincer umatlas      4096 Mar 13 14:51 shared
[2026-03-13 16:06:05] -rw-r--r--. 2 boincer umatlas    597523 Mar 13 14:51 input.tar.gz
[2026-03-13 16:06:05] -rw-r--r--. 1 boincer umatlas         0 Mar 13 14:51 boinc_lockfile
[2026-03-13 16:06:05] -rw-r--r--. 1 boincer umatlas      2564 Mar 13 14:51 pandaJob.out
[2026-03-13 16:06:05] -rw-------. 1 boincer umatlas        57 Mar 13 14:51 setup.sh.local
[2026-03-13 16:06:05] -rw-------. 1 boincer umatlas   1006643 Mar 13 14:51 agis_schedconf.cvmfs.json
[2026-03-13 16:06:05] -rw-------. 1 boincer umatlas   1511579 Mar 13 14:51 agis_ddmendpoints.agis.ALL.json
[2026-03-13 16:06:05] -rw-------. 1 boincer umatlas       430 Mar 13 14:51 workernode_map.json
[2026-03-13 16:06:05] drwx------. 5 boincer umatlas      4096 Mar 13 14:51 pilot3
[2026-03-13 16:06:05] -rw-r--r--. 1 boincer umatlas      6910 Mar 13 16:01 init_data.xml
[2026-03-13 16:06:05] -rw-------. 1 boincer umatlas 186631280 Mar 13 16:04 HITS.48955010._031153.pool.root.1
[2026-03-13 16:06:05] -rw-r--r--. 1 boincer umatlas       530 Mar 13 16:04 boinc_task_state.xml
[2026-03-13 16:06:05] -rw-------. 1 boincer umatlas      1035 Mar 13 16:04 memory_monitor_summary.json
[2026-03-13 16:06:05] -rw-------. 1 boincer umatlas    361516 Mar 13 16:04 log.48955010._031153.job.log.tgz.1
[2026-03-13 16:06:05] -rw-------. 1 boincer umatlas      6338 Mar 13 16:04 heartbeat.json
[2026-03-13 16:06:05] -rw-------. 1 boincer umatlas        95 Mar 13 16:05 pilot_heartbeat.json
[2026-03-13 16:06:05] -rw-r--r--. 1 boincer umatlas      8192 Mar 13 16:06 boinc_mmap_file
[2026-03-13 16:06:05] -rw-r--r--. 1 boincer umatlas        27 Mar 13 16:06 wrapper_checkpoint.txt
[2026-03-13 16:06:05] -rw-------. 1 boincer umatlas      5664 Mar 13 16:06 pilotlog.txt
[2026-03-13 16:06:05] -rw-------. 1 boincer umatlas    647340 Mar 13 16:06 log.48955010._031153.job.log.1
[2026-03-13 16:06:05] -rw-------. 1 boincer umatlas       357 Mar 13 16:06 output.list
[2026-03-13 16:06:05] -rw-r--r--. 1 boincer umatlas       620 Mar 13 16:06 runtime_log
[2026-03-13 16:06:05] -rw-------. 1 boincer umatlas   1024000 Mar 13 16:06 result.tar.gz
[2026-03-13 16:06:05] -rw-r--r--. 1 boincer umatlas      9341 Mar 13 16:06 runtime_log.err
[2026-03-13 16:06:05] -rw-------. 1 boincer umatlas       652 Mar 13 16:06 DzQKDmbFIL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmngpLDmseIPmm.diag
[2026-03-13 16:06:05] -rw-r--r--. 1 boincer umatlas     21768 Mar 13 16:06 stderr.txt
[2026-03-13 16:06:05] HITS file was successfully produced:
[2026-03-13 16:06:05] -rw-------. 1 boincer umatlas 186631280 Mar 13 16:04 shared/HITS.pool.root.1
[2026-03-13 16:06:05]  *** Contents of shared directory: ***
[2026-03-13 16:06:05] total 610396
[2026-03-13 16:06:05] -rw-r--r--. 2 boincer umatlas 436764592 Mar 13 14:51 ATLAS.root_0
[2026-03-13 16:06:05] -rw-r--r--. 2 boincer umatlas     15845 Mar 13 14:51 start_atlas.sh
[2026-03-13 16:06:05] -rw-r--r--. 2 boincer umatlas    597523 Mar 13 14:51 input.tar.gz
[2026-03-13 16:06:05] -rw-------. 1 boincer umatlas 186631280 Mar 13 16:04 HITS.pool.root.1
[2026-03-13 16:06:05] -rw-------. 1 boincer umatlas   1024000 Mar 13 16:06 result.tar.gz
16:06:07 (3061840): run_atlas exited; CPU time 31176.996933
16:06:07 (3061840): called boinc_finish(0)

</stderr_txt>
]]>

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