Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:39:40 (631032): wrapper (7.7.26015): starting
14:39:40 (631032): wrapper: running run_atlas (--nthreads 9)
[2026-03-13 14:39:40] Arguments: --nthreads 9
[2026-03-13 14:39:40] Threads: 9
[2026-03-13 14:39:40] Checking for CVMFS
[2026-03-13 14:39:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 14:39:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 14:39:41] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 14:39:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 14:39:41] 2.13.3.0 10042 112582 226564 157250 0 202 35593963 39288833 8998 16776704 0 87136311 99.519 124966119 34111 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-13 14:39:41] CVMFS is ok
[2026-03-13 14:39:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 14:39:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 14:39:41] Further information can be found at the LHC@home message board.
[2026-03-13 14:39:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 14:39:41] Checking for apptainer binary...
[2026-03-13 14:39:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 14:39:41] Running /usr/bin/apptainer --version
[2026-03-13 14:39:41] apptainer version 1.4.5-2.el9
[2026-03-13 14:39:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 14:39:41] c-210-28.aglt2.org
[2026-03-13 14:39:41] apptainer works
[2026-03-13 14:39:41] Set ATHENA_PROC_NUMBER=9
[2026-03-13 14:39:41] Set ATHENA_CORE_NUMBER=9
[2026-03-13 14:39:41] Starting ATLAS job with PandaID=7044199866
[2026-03-13 14:39:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 22:15:54]  *** The last 200 lines of the pilot log: ***
[2026-03-13 22:15:54] 2026-03-14 02:14:59,064 | INFO     | job 7044199866 has finished - writing final server update
[2026-03-13 22:15:54] 2026-03-14 02:14:59,065 | INFO     | total number of processed events: 400 (read)
[2026-03-13 22:15:54] 2026-03-14 02:14:59,071 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7044199866/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 22:15:54] 2026-03-14 02:14:59,072 | INFO     | extracted standard info from prmon json
[2026-03-13 22:15:54] 2026-03-14 02:14:59,072 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 22:15:54] 2026-03-14 02:14:59,072 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 22:15:54] 2026-03-14 02:14:59,072 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 22:15:54] 2026-03-14 02:14:59,073 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 22:15:54] 2026-03-14 02:14:59,081 | INFO     | fitting pss+swap vs Time
[2026-03-13 22:15:54] 2026-03-14 02:14:59,082 | INFO     | sum of square deviations: 27696137714.093906
[2026-03-13 22:15:54] 2026-03-14 02:14:59,087 | INFO     | sum of deviations: 97657191165.01338
[2026-03-13 22:15:54] 2026-03-14 02:14:59,087 | INFO     | mean x: 1773440840.3691275
[2026-03-13 22:15:54] 2026-03-14 02:14:59,087 | INFO     | mean y: 2556133.624161074
[2026-03-13 22:15:54] 2026-03-14 02:14:59,087 | INFO     | intersect: -6250635302.510199
[2026-03-13 22:15:54] 2026-03-14 02:14:59,088 | INFO     | chi2: 2.0236488323000583
[2026-03-13 22:15:54] 2026-03-14 02:14:59,089 | INFO     | sum of square deviations: 26777266678.6448
[2026-03-13 22:15:54] 2026-03-14 02:14:59,094 | INFO     | sum of deviations: 94596572371.01137
[2026-03-13 22:15:54] 2026-03-14 02:14:59,094 | INFO     | mean x: 1773440687.8800905
[2026-03-13 22:15:54] 2026-03-14 02:14:59,094 | INFO     | mean y: 2555625.71719457
[2026-03-13 22:15:54] 2026-03-14 02:14:59,094 | INFO     | intersect: -6262512888.932097
[2026-03-13 22:15:54] 2026-03-14 02:14:59,095 | INFO     | chi2: 2.023733971639151
[2026-03-13 22:15:54] 2026-03-14 02:14:59,095 | INFO     | current chi2=2.023733971639151 (change=-0.004207219045798114 %)
[2026-03-13 22:15:54] 2026-03-14 02:14:59,095 | INFO     | right removable region: 441
[2026-03-13 22:15:54] 2026-03-14 02:14:59,096 | INFO     | sum of square deviations: 26776975157.882492
[2026-03-13 22:15:54] 2026-03-14 02:14:59,101 | INFO     | sum of deviations: 4598794657.00001
[2026-03-13 22:15:54] 2026-03-14 02:14:59,101 | INFO     | mean x: 1773440992.8823528
[2026-03-13 22:15:54] 2026-03-14 02:14:59,101 | INFO     | mean y: 2571521.153846154
[2026-03-13 22:15:54] 2026-03-14 02:14:59,101 | INFO     | intersect: -302006980.13259655
[2026-03-13 22:15:54] 2026-03-14 02:14:59,102 | INFO     | chi2: 0.11850435559360405
[2026-03-13 22:15:54] 2026-03-14 02:14:59,102 | INFO     | current chi2=0.11850435559360405 (change=94.14402569743717 %)
[2026-03-13 22:15:54] 2026-03-14 02:14:59,103 | INFO     | sum of square deviations: 25878425418.086876
[2026-03-13 22:15:54] 2026-03-14 02:14:59,108 | INFO     | sum of deviations: -5342090976.695672
[2026-03-13 22:15:54] 2026-03-14 02:14:59,108 | INFO     | mean x: 1773441145.3913043
[2026-03-13 22:15:54] 2026-03-14 02:14:59,108 | INFO     | mean y: 2573196.5011441647
[2026-03-13 22:15:54] 2026-03-14 02:14:59,108 | INFO     | intersect: 368665174.178977
[2026-03-13 22:15:54] 2026-03-14 02:14:59,109 | INFO     | chi2: 0.08010342998369492
[2026-03-13 22:15:54] 2026-03-14 02:14:59,109 | INFO     | current chi2=0.08010342998369492 (change=32.404653329030644 %)
[2026-03-13 22:15:54] 2026-03-14 02:14:59,109 | INFO     | sum of square deviations: 25000174739.916832
[2026-03-13 22:15:54] 2026-03-14 02:14:59,114 | INFO     | sum of deviations: 3010363921.5416636
[2026-03-13 22:15:54] 2026-03-14 02:14:59,114 | INFO     | mean x: 1773441297.9027777
[2026-03-13 22:15:54] 2026-03-14 02:14:59,115 | INFO     | mean y: 2571745.1319444445
[2026-03-13 22:15:54] 2026-03-14 02:14:59,115 | INFO     | intersect: -210974910.2702051
[2026-03-13 22:15:54] 2026-03-14 02:14:59,115 | INFO     | chi2: 0.06839577544299494
[2026-03-13 22:15:54] 2026-03-14 02:14:59,116 | INFO     | current chi2=0.06839577544299494 (change=14.615671941991849 %)
[2026-03-13 22:15:54] 2026-03-14 02:14:59,116 | INFO     | left removable region: 30
[2026-03-13 22:15:54] 2026-03-14 02:14:59,116 | INFO     | sum of square deviations: 21528610305.289513
[2026-03-13 22:15:54] 2026-03-14 02:14:59,121 | INFO     | sum of deviations: 27997308653.03891
[2026-03-13 22:15:54] 2026-03-14 02:14:59,121 | INFO     | mean x: 1773441572.4403894
[2026-03-13 22:15:54] 2026-03-14 02:14:59,121 | INFO     | mean y: 2566248.7566909976
[2026-03-13 22:15:54] 2026-03-14 02:14:59,121 | INFO     | intersect: -2303741050.1192145
[2026-03-13 22:15:54] 2026-03-14 02:14:59,122 | INFO     | chi2: 0.0047259780911626074
[2026-03-13 22:15:54] 2026-03-14 02:14:59,122 | INFO     | current memory leak: 1.30 B/s (using 411 data points, chi2=0.00)
[2026-03-13 22:15:54] 2026-03-14 02:14:59,123 | INFO     | could have reported an average CPU frequency of 2619 MHz (19 samples)
[2026-03-13 22:15:54] 2026-03-14 02:14:59,123 | INFO     | ..............................
[2026-03-13 22:15:54] 2026-03-14 02:14:59,123 | INFO     | . Timing measurements:
[2026-03-13 22:15:54] 2026-03-14 02:14:59,123 | INFO     | . get job = 0 s
[2026-03-13 22:15:54] 2026-03-14 02:14:59,123 | INFO     | . initial setup = 6 s
[2026-03-13 22:15:54] 2026-03-14 02:14:59,124 | INFO     | . payload setup = 8 s
[2026-03-13 22:15:54] 2026-03-14 02:14:59,124 | INFO     | . stage-in = 0 s
[2026-03-13 22:15:54] 2026-03-14 02:14:59,124 | INFO     | . payload execution = 27274 s
[2026-03-13 22:15:54] 2026-03-14 02:14:59,124 | INFO     | . stage-out = 2 s
[2026-03-13 22:15:54] 2026-03-14 02:14:59,124 | INFO     | . log creation = 0 s
[2026-03-13 22:15:54] 2026-03-14 02:14:59,124 | INFO     | ..............................
[2026-03-13 22:15:54] 2026-03-14 02:14:59,490 | INFO     | 
[2026-03-13 22:15:54] 2026-03-14 02:14:59,491 | INFO     | job summary report
[2026-03-13 22:15:54] 2026-03-14 02:14:59,491 | INFO     | --------------------------------------------------
[2026-03-13 22:15:54] 2026-03-14 02:14:59,491 | INFO     | PanDA job id: 7044199866
[2026-03-13 22:15:54] 2026-03-14 02:14:59,491 | INFO     | task id: 48955010
[2026-03-13 22:15:54] 2026-03-14 02:14:59,491 | INFO     | errors: (none)
[2026-03-13 22:15:54] 2026-03-14 02:14:59,491 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 22:15:54] 2026-03-14 02:14:59,491 | INFO     | pilot state: finished 
[2026-03-13 22:15:54] 2026-03-14 02:14:59,491 | INFO     | transexitcode: 0
[2026-03-13 22:15:54] 2026-03-14 02:14:59,492 | INFO     | exeerrorcode: 0
[2026-03-13 22:15:54] 2026-03-14 02:14:59,492 | INFO     | exeerrordiag: 
[2026-03-13 22:15:54] 2026-03-14 02:14:59,492 | INFO     | exitcode: 0
[2026-03-13 22:15:54] 2026-03-14 02:14:59,492 | INFO     | exitmsg: OK
[2026-03-13 22:15:54] 2026-03-14 02:14:59,492 | INFO     | cpuconsumptiontime: 47472 s
[2026-03-13 22:15:54] 2026-03-14 02:14:59,492 | INFO     | nevents: 400
[2026-03-13 22:15:54] 2026-03-14 02:14:59,492 | INFO     | neventsw: 0
[2026-03-13 22:15:54] 2026-03-14 02:14:59,492 | INFO     | pid: 641382
[2026-03-13 22:15:54] 2026-03-14 02:14:59,492 | INFO     | pgrp: 641382
[2026-03-13 22:15:54] 2026-03-14 02:14:59,492 | INFO     | corecount: 9
[2026-03-13 22:15:54] 2026-03-14 02:14:59,493 | INFO     | event service: False
[2026-03-13 22:15:54] 2026-03-14 02:14:59,493 | INFO     | sizes: {0: 2279089, 1: 2280207, 12: 2280207, 27285: 2316768, 27286: 2316767, 27289: 2325821, 27290: 2326005, 27291: 2326199}
[2026-03-13 22:15:54] 2026-03-14 02:14:59,493 | INFO     | --------------------------------------------------
[2026-03-13 22:15:54] 2026-03-14 02:14:59,493 | INFO     | 
[2026-03-13 22:15:54] 2026-03-14 02:14:59,493 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-13 22:15:54] 2026-03-14 02:14:59,514 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 22:15:54] 2026-03-14 02:14:59,514 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 22:15:54] 2026-03-14 02:14:59,514 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 22:15:54] 2026-03-14 02:14:59,514 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 22:15:54] 2026-03-14 02:14:59,515 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 22:15:54] 2026-03-14 02:14:59,515 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 22:15:54] 2026-03-14 02:14:59,515 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 22:15:54] 2026-03-14 02:14:59,515 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 22:15:54] 2026-03-14 02:14:59,516 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 22:15:54] 2026-03-14 02:14:59,516 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 22:15:54] 2026-03-14 02:14:59,516 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 22:15:54] 2026-03-14 02:14:59,516 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 22:15:54] 2026-03-14 02:14:59,517 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 22:15:54] 2026-03-14 02:14:59,517 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 22:15:54] 2026-03-14 02:14:59,517 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 22:15:54] 2026-03-14 02:14:59,517 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 22:15:54] 2026-03-14 02:14:59,517 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 22:15:54] 2026-03-14 02:14:59,518 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 22:15:54] 2026-03-14 02:14:59,518 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 22:15:54] 2026-03-14 02:14:59,518 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 22:15:54] 2026-03-14 02:14:59,518 | INFO     | job 7044199866 has completed (purged errors)
[2026-03-13 22:15:54] 2026-03-14 02:14:59,518 | INFO     | overall cleanup function is called
[2026-03-13 22:15:54] 2026-03-14 02:14:59,738 | INFO     | PID=635528 has CPU usage=10.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-13 22:15:54] 2026-03-14 02:14:59,738 | INFO     | .. there are 13 such processes running
[2026-03-13 22:15:54] 2026-03-14 02:15:00,528 | INFO     | --- collectZombieJob: --- 10, [641382]
[2026-03-13 22:15:54] 2026-03-14 02:15:00,529 | INFO     | zombie collector waiting for pid 641382
[2026-03-13 22:15:54] 2026-03-14 02:15:00,529 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 22:15:54] 2026-03-14 02:15:00,529 | INFO     | collected zombie processes
[2026-03-13 22:15:54] 2026-03-14 02:15:00,529 | INFO     | will attempt to kill all subprocesses of pid=641382
[2026-03-13 22:15:54] 2026-03-14 02:15:00,820 | INFO     | process IDs to be killed: [641382] (in reverse order)
[2026-03-13 22:15:54] 2026-03-14 02:15:00,902 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 22:15:54] 2026-03-14 02:15:00,902 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 22:15:54] 2026-03-14 02:15:00,912 | INFO     | did not find any defunct processes belonging to 641382
[2026-03-13 22:15:54] 2026-03-14 02:15:00,921 | INFO     | did not find any defunct processes belonging to 641382
[2026-03-13 22:15:54] 2026-03-14 02:15:00,921 | INFO     | ready for new job
[2026-03-13 22:15:54] 2026-03-14 02:15:00,921 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 22:15:54] 2026-03-14 02:15:00,924 | INFO     | **************************************
[2026-03-13 22:15:54] 2026-03-14 02:15:00,924 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 22:15:54] 2026-03-14 02:15:00,924 | INFO     | **************************************
[2026-03-13 22:15:54] 2026-03-14 02:15:00,924 | INFO     | 
[2026-03-13 22:15:54] 2026-03-14 02:15:00,926 | INFO     | architecture information:
[2026-03-13 22:15:54] 2026-03-14 02:15:00,926 | INFO     | executing command: cat /etc/os-release
[2026-03-13 22:15:54] 2026-03-14 02:15:00,939 | INFO     | cat /etc/os-release:
[2026-03-13 22:15:54] NAME="CentOS Linux"
[2026-03-13 22:15:54] VERSION="7 (Core)"
[2026-03-13 22:15:54] ID="centos"
[2026-03-13 22:15:54] ID_LIKE="rhel fedora"
[2026-03-13 22:15:54] VERSION_ID="7"
[2026-03-13 22:15:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 22:15:54] ANSI_COLOR="0;31"
[2026-03-13 22:15:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 22:15:54] HOME_URL="https://www.centos.org/"
[2026-03-13 22:15:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 22:15:54] 
[2026-03-13 22:15:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 22:15:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 22:15:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 22:15:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 22:15:54] 
[2026-03-13 22:15:54] 2026-03-14 02:15:00,939 | INFO     | **************************************
[2026-03-13 22:15:54] 2026-03-14 02:15:01,442 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-13 22:15:54] 2026-03-14 02:15:01,456 | INFO     | sufficient remaining disk space (52930019328 B)
[2026-03-13 22:15:54] 2026-03-14 02:15:01,457 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 22:15:54] 2026-03-14 02:15:01,457 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 22:15:54] 2026-03-14 02:15:01,457 | INFO     | update_server=False
[2026-03-13 22:15:54] 2026-03-14 02:15:01,457 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 22:15:54] 2026-03-14 02:15:01,457 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 22:15:54] 2026-03-14 02:15:01,458 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 22:15:54] 2026-03-14 02:15:01,458 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 22:15:54] 2026-03-14 02:15:01,458 | INFO     | aborting loop
[2026-03-13 22:15:54] 2026-03-14 02:15:02,208 | INFO     | all payload control threads have been joined
[2026-03-13 22:15:54] 2026-03-14 02:15:02,239 | INFO     | all job control threads have been joined
[2026-03-13 22:15:54] 2026-03-14 02:15:02,298 | INFO     | all data control threads have been joined
[2026-03-13 22:15:54] 2026-03-14 02:15:02,458 | INFO     | [job] retrieve thread has finished
[2026-03-13 22:15:54] 2026-03-14 02:15:02,464 | INFO     | [job] job monitor thread has finished
[2026-03-13 22:15:54] 2026-03-14 02:15:02,511 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 22:15:54] 2026-03-14 02:15:02,744 | INFO     | [data] copytool_in thread has finished
[2026-03-13 22:15:54] 2026-03-14 02:15:02,807 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 22:15:54] 2026-03-14 02:15:02,896 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 22:15:54] 2026-03-14 02:15:02,987 | INFO     | [payload] failed_post thread has finished
[2026-03-13 22:15:54] 2026-03-14 02:15:03,206 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 22:15:54] 2026-03-14 02:15:03,213 | INFO     | [payload] control thread has finished
[2026-03-13 22:15:54] 2026-03-14 02:15:03,245 | INFO     | [job] control thread has finished
[2026-03-13 22:15:54] 2026-03-14 02:15:03,306 | INFO     | [data] control thread has finished
[2026-03-13 22:15:54] 2026-03-14 02:15:03,462 | INFO     | [data] copytool_out thread has finished
[2026-03-13 22:15:54] 2026-03-14 02:15:03,508 | INFO     | [payload] validate_post thread has finished
[2026-03-13 22:15:54] 2026-03-14 02:15:03,868 | INFO     | [job] validate thread has finished
[2026-03-13 22:15:54] 2026-03-14 02:15:04,235 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 22:15:54] 2026-03-14 02:15:05,240 | INFO     | [job] queue monitor thread has finished
[2026-03-13 22:15:54] 2026-03-14 02:15:05,465 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 22:15:54] 2026-03-14 02:15:32,157 | INFO     | PID=635528 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-13 22:15:54] 2026-03-14 02:15:32,158 | INFO     | .. there are 12 such processes running
[2026-03-13 22:15:54] 2026-03-14 02:15:32,159 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 22:15:54] 2026-03-14 02:15:32,159 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 22:15:54] 2026-03-14 02:15:32,159 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 22:15:54] 2026-03-14 02:15:47,707 | INFO     | [monitor] cgroup control has ended
[2026-03-13 22:15:54] 2026-03-14 02:15:49,157 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140183530460992)>', '<ExcThread(monitor, started 140183143958272)>']
[2026-03-13 22:15:54] 2026-03-14 02:15:49,248 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 22:15:54] 2026-03-14 02:15:49,249 | INFO     | [monitor] control thread has ended
[2026-03-13 22:15:54] 2026-03-14 02:15:54,157 | INFO     | all workflow threads have been joined
[2026-03-13 22:15:54] 2026-03-14 02:15:54,158 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 22:15:54] 2026-03-14 02:15:54,158 | INFO     | traces error code: 0
[2026-03-13 22:15:54] 2026-03-14 02:15:54,158 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 22:15:54] 2026-03-14 02:15:54,270 [wrapper] ==== pilot stdout END ====
[2026-03-13 22:15:54] 2026-03-14 02:15:54,272 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 22:15:54] 2026-03-14 02:15:54,275 [wrapper] pilotpid: 635528
[2026-03-13 22:15:54] 2026-03-14 02:15:54,278 [wrapper] Pilot exit status: 0
[2026-03-13 22:15:54] 2026-03-14 02:15:54,287 [wrapper] pandaids: 7044199866
[2026-03-13 22:15:54] 2026-03-14 02:15:54,354 [wrapper] cleanup supervisor_pilot 1346550 635529
[2026-03-13 22:15:54] 2026-03-14 02:15:54,357 [wrapper] Test setup, not cleaning
[2026-03-13 22:15:54] 2026-03-14 02:15:54,360 [wrapper] apfmon messages muted
[2026-03-13 22:15:54] 2026-03-14 02:15:54,363 [wrapper] ==== wrapper stdout END ====
[2026-03-13 22:15:54] 2026-03-14 02:15:54,366 [wrapper] ==== wrapper stderr END ====
[2026-03-13 22:15:54]  *** Error codes and diagnostics ***
[2026-03-13 22:15:54]     "exeErrorCode": 0,
[2026-03-13 22:15:54]     "exeErrorDiag": "",
[2026-03-13 22:15:54]     "pilotErrorCode": 0,
[2026-03-13 22:15:54]     "pilotErrorDiag": "",
[2026-03-13 22:15:54]  *** Listing of results directory ***
[2026-03-13 22:15:54] total 617140
[2026-03-13 22:15:54] -rw-r--r--. 1 boincer umatlas    585013 Mar 13 09:59 pilot3.tar.gz
[2026-03-13 22:15:54] -rwx------. 1 boincer umatlas     36322 Mar 13 10:02 runpilot2-wrapper.sh
[2026-03-13 22:15:54] -rw-r--r--. 1 boincer umatlas      5111 Mar 13 10:05 queuedata.json
[2026-03-13 22:15:54] -rw-r--r--. 1 boincer umatlas       100 Mar 13 14:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 22:15:54] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 13 14:39 run_atlas
[2026-03-13 22:15:54] -rw-r--r--. 1 boincer umatlas       105 Mar 13 14:39 job.xml
[2026-03-13 22:15:54] -rw-r--r--. 2 boincer umatlas 436764592 Mar 13 14:39 EVNT.46701403._001617.pool.root.1
[2026-03-13 22:15:54] -rw-r--r--. 2 boincer umatlas     15845 Mar 13 14:39 start_atlas.sh
[2026-03-13 22:15:54] drwxrwx--x. 2 boincer umatlas      4096 Mar 13 14:39 shared
[2026-03-13 22:15:54] -rw-r--r--. 2 boincer umatlas    597533 Mar 13 14:39 input.tar.gz
[2026-03-13 22:15:54] -rw-r--r--. 1 boincer umatlas         0 Mar 13 14:39 boinc_lockfile
[2026-03-13 22:15:54] -rw-r--r--. 1 boincer umatlas      2563 Mar 13 14:39 pandaJob.out
[2026-03-13 22:15:54] -rw-------. 1 boincer umatlas        57 Mar 13 14:39 setup.sh.local
[2026-03-13 22:15:54] -rw-------. 1 boincer umatlas   1006643 Mar 13 14:39 agis_schedconf.cvmfs.json
[2026-03-13 22:15:54] -rw-------. 1 boincer umatlas       442 Mar 13 14:39 workernode_map.json
[2026-03-13 22:15:54] drwx------. 5 boincer umatlas      4096 Mar 13 14:39 pilot3
[2026-03-13 22:15:54] -rw-r--r--. 1 boincer umatlas      6660 Mar 13 22:13 init_data.xml
[2026-03-13 22:15:54] -rw-------. 1 boincer umatlas 183435117 Mar 13 22:14 HITS.48955010._031120.pool.root.1
[2026-03-13 22:15:54] -rw-r--r--. 1 boincer umatlas       531 Mar 13 22:14 boinc_task_state.xml
[2026-03-13 22:15:54] -rw-------. 1 boincer umatlas      1039 Mar 13 22:14 memory_monitor_summary.json
[2026-03-13 22:15:54] -rw-------. 1 boincer umatlas   1511579 Mar 13 22:14 agis_ddmendpoints.agis.ALL.json
[2026-03-13 22:15:54] -rw-------. 1 boincer umatlas    622224 Mar 13 22:14 log.48955010._031120.job.log.tgz.1
[2026-03-13 22:15:54] -rw-------. 1 boincer umatlas      6393 Mar 13 22:14 heartbeat.json
[2026-03-13 22:15:54] -rw-r--r--. 1 boincer umatlas        27 Mar 13 22:15 wrapper_checkpoint.txt
[2026-03-13 22:15:54] -rw-r--r--. 1 boincer umatlas      8192 Mar 13 22:15 boinc_mmap_file
[2026-03-13 22:15:54] -rw-------. 1 boincer umatlas        95 Mar 13 22:15 pilot_heartbeat.json
[2026-03-13 22:15:54] -rw-------. 1 boincer umatlas      4819 Mar 13 22:15 pilotlog.txt
[2026-03-13 22:15:54] -rw-------. 1 boincer umatlas   3285910 Mar 13 22:15 log.48955010._031120.job.log.1
[2026-03-13 22:15:54] -rw-------. 1 boincer umatlas       357 Mar 13 22:15 output.list
[2026-03-13 22:15:54] -rw-r--r--. 1 boincer umatlas       620 Mar 13 22:15 runtime_log
[2026-03-13 22:15:54] -rw-------. 1 boincer umatlas   3921920 Mar 13 22:15 result.tar.gz
[2026-03-13 22:15:54] -rw-------. 1 boincer umatlas       656 Mar 13 22:15 Vk3LDmUHIL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm3mpLDmaTWLPn.diag
[2026-03-13 22:15:54] -rw-r--r--. 1 boincer umatlas      9342 Mar 13 22:15 runtime_log.err
[2026-03-13 22:15:54] -rw-r--r--. 1 boincer umatlas     21250 Mar 13 22:15 stderr.txt
[2026-03-13 22:15:54] HITS file was successfully produced:
[2026-03-13 22:15:54] -rw-------. 1 boincer umatlas 183435117 Mar 13 22:14 shared/HITS.pool.root.1
[2026-03-13 22:15:54]  *** Contents of shared directory: ***
[2026-03-13 22:15:54] total 610104
[2026-03-13 22:15:54] -rw-r--r--. 2 boincer umatlas 436764592 Mar 13 14:39 ATLAS.root_0
[2026-03-13 22:15:54] -rw-r--r--. 2 boincer umatlas     15845 Mar 13 14:39 start_atlas.sh
[2026-03-13 22:15:54] -rw-r--r--. 2 boincer umatlas    597533 Mar 13 14:39 input.tar.gz
[2026-03-13 22:15:54] -rw-------. 1 boincer umatlas 183435117 Mar 13 22:14 HITS.pool.root.1
[2026-03-13 22:15:54] -rw-------. 1 boincer umatlas   3921920 Mar 13 22:15 result.tar.gz
22:15:56 (631032): run_atlas exited; CPU time 48267.201265
22:15:56 (631032): called boinc_finish(0)

</stderr_txt>
]]>

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