Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:04:11 (23580): wrapper (7.7.26015): starting
06:04:11 (23580): wrapper: running run_atlas (--nthreads 8)
[2026-03-14 06:04:11] Arguments: --nthreads 8
[2026-03-14 06:04:11] Threads: 8
[2026-03-14 06:04:11] Checking for CVMFS
[2026-03-14 06:04:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 06:04:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 06:04:13] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 06:04:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 06:04:14] 2.11.2.0 23879 127130 132872 157265 3 94 12591016 25165824 1081 130560 157 32912227 99.800 27000245 850 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-14 06:04:14] CVMFS is ok
[2026-03-14 06:04:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 06:04:14] Checking for apptainer binary...
[2026-03-14 06:04:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 06:04:14] Running /usr/bin/apptainer --version
[2026-03-14 06:04:14] apptainer version 1.3.2-1.el7
[2026-03-14 06:04:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 06:04:20] cg-vwn385.simple-grid.lan
[2026-03-14 06:04:20] apptainer works
[2026-03-14 06:04:20] Set ATHENA_PROC_NUMBER=8
[2026-03-14 06:04:20] Set ATHENA_CORE_NUMBER=8
[2026-03-14 06:04:20] Starting ATLAS job with PandaID=7044816588
[2026-03-14 06:04:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 10:18:27]  *** The last 200 lines of the pilot log: ***
[2026-03-14 10:18:27] 2026-03-14 09:17:14,576 | INFO     | job 7044816588 has finished - writing final server update
[2026-03-14 10:18:27] 2026-03-14 09:17:14,577 | INFO     | total number of processed events: 400 (read)
[2026-03-14 10:18:27] 2026-03-14 09:17:14,579 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-7044816588/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 10:18:27] 2026-03-14 09:17:14,579 | INFO     | extracted standard info from prmon json
[2026-03-14 10:18:27] 2026-03-14 09:17:14,579 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 10:18:27] 2026-03-14 09:17:14,580 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 10:18:27] 2026-03-14 09:17:14,580 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 10:18:27] 2026-03-14 09:17:14,580 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 10:18:27] 2026-03-14 09:17:14,585 | INFO     | fitting pss+swap vs Time
[2026-03-14 10:18:27] 2026-03-14 09:17:14,586 | INFO     | sum of square deviations: 4180243959.5
[2026-03-14 10:18:27] 2026-03-14 09:17:14,588 | INFO     | sum of deviations: 59514260331.99999
[2026-03-14 10:18:27] 2026-03-14 09:17:14,588 | INFO     | mean x: 1773472576.5
[2026-03-14 10:18:27] 2026-03-14 09:17:14,588 | INFO     | mean y: 2459279.8907563025
[2026-03-14 10:18:27] 2026-03-14 09:17:14,588 | INFO     | intersect: -25246523705.80759
[2026-03-14 10:18:27] 2026-03-14 09:17:14,588 | INFO     | chi2: 7.886370962190345
[2026-03-14 10:18:27] 2026-03-14 09:17:14,589 | INFO     | sum of square deviations: 3922276332.0
[2026-03-14 10:18:27] 2026-03-14 09:17:14,591 | INFO     | sum of deviations: 74526101387.0
[2026-03-14 10:18:27] 2026-03-14 09:17:14,591 | INFO     | mean x: 1773472424.0
[2026-03-14 10:18:27] 2026-03-14 09:17:14,591 | INFO     | mean y: 2467990.9613733906
[2026-03-14 10:18:27] 2026-03-14 09:17:14,591 | INFO     | intersect: -33694797191.44308
[2026-03-14 10:18:27] 2026-03-14 09:17:14,592 | INFO     | chi2: 7.131652272465008
[2026-03-14 10:18:27] 2026-03-14 09:17:14,592 | INFO     | current chi2=7.131652272465008 (change=9.56991109527674 %)
[2026-03-14 10:18:27] 2026-03-14 09:17:14,592 | INFO     | right removable region: 232
[2026-03-14 10:18:27] 2026-03-14 09:17:14,592 | INFO     | sum of square deviations: 3922276332.0
[2026-03-14 10:18:27] 2026-03-14 09:17:14,598 | INFO     | sum of deviations: -22111481788.0
[2026-03-14 10:18:27] 2026-03-14 09:17:14,599 | INFO     | mean x: 1773472729.0
[2026-03-14 10:18:27] 2026-03-14 09:17:14,599 | INFO     | mean y: 2507494.652360515
[2026-03-14 10:18:27] 2026-03-14 09:17:14,599 | INFO     | intersect: 10000301283.139101
[2026-03-14 10:18:27] 2026-03-14 09:17:14,599 | INFO     | chi2: 3.088942984744938
[2026-03-14 10:18:27] 2026-03-14 09:17:14,599 | INFO     | current chi2=3.088942984744938 (change=60.83188326349005 %)
[2026-03-14 10:18:27] 2026-03-14 09:17:14,600 | INFO     | sum of square deviations: 3675146117.0
[2026-03-14 10:18:27] 2026-03-14 09:17:14,602 | INFO     | sum of deviations: -72586421709.5
[2026-03-14 10:18:27] 2026-03-14 09:17:14,602 | INFO     | mean x: 1773472881.5
[2026-03-14 10:18:27] 2026-03-14 09:17:14,602 | INFO     | mean y: 2538514.1622807016
[2026-03-14 10:18:27] 2026-03-14 09:17:14,602 | INFO     | intersect: 35029731003.58708
[2026-03-14 10:18:27] 2026-03-14 09:17:14,603 | INFO     | chi2: 1.1314563106471645
[2026-03-14 10:18:27] 2026-03-14 09:17:14,603 | INFO     | current chi2=1.1314563106471645 (change=63.37076092906286 %)
[2026-03-14 10:18:27] 2026-03-14 09:17:14,603 | INFO     | sum of square deviations: 3438620752.0
[2026-03-14 10:18:27] 2026-03-14 09:17:14,605 | INFO     | sum of deviations: -74822714923.99998
[2026-03-14 10:18:27] 2026-03-14 09:17:14,605 | INFO     | mean x: 1773473034.0
[2026-03-14 10:18:27] 2026-03-14 09:17:14,606 | INFO     | mean y: 2539906.147982063
[2026-03-14 10:18:27] 2026-03-14 09:17:14,606 | INFO     | intersect: 38592450460.024414
[2026-03-14 10:18:27] 2026-03-14 09:17:14,606 | INFO     | chi2: 1.0825941256500584
[2026-03-14 10:18:27] 2026-03-14 09:17:14,606 | INFO     | current chi2=1.0825941256500584 (change=4.318521584731637 %)
[2026-03-14 10:18:27] 2026-03-14 09:17:14,606 | INFO     | left removable region: 30
[2026-03-14 10:18:27] 2026-03-14 09:17:14,607 | INFO     | sum of square deviations: 2555770710.5
[2026-03-14 10:18:27] 2026-03-14 09:17:14,608 | INFO     | sum of deviations: -38239234181.49998
[2026-03-14 10:18:27] 2026-03-14 09:17:14,609 | INFO     | mean x: 1773473308.5
[2026-03-14 10:18:27] 2026-03-14 09:17:14,609 | INFO     | mean y: 2536662.4504950494
[2026-03-14 10:18:27] 2026-03-14 09:17:14,609 | INFO     | intersect: 26537100533.833065
[2026-03-14 10:18:27] 2026-03-14 09:17:14,609 | INFO     | chi2: 0.20316240198912894
[2026-03-14 10:18:27] 2026-03-14 09:17:14,609 | INFO     | current memory leak: -14.96 B/s (using 202 data points, chi2=0.20)
[2026-03-14 10:18:27] 2026-03-14 09:17:14,610 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-03-14 10:18:27] 2026-03-14 09:17:14,610 | INFO     | ..............................
[2026-03-14 10:18:27] 2026-03-14 09:17:14,610 | INFO     | . Timing measurements:
[2026-03-14 10:18:27] 2026-03-14 09:17:14,610 | INFO     | . get job = 0 s
[2026-03-14 10:18:27] 2026-03-14 09:17:14,610 | INFO     | . initial setup = 126 s
[2026-03-14 10:18:27] 2026-03-14 09:17:14,611 | INFO     | . payload setup = 148 s
[2026-03-14 10:18:27] 2026-03-14 09:17:14,611 | INFO     | . stage-in = 0 s
[2026-03-14 10:18:27] 2026-03-14 09:17:14,611 | INFO     | . payload execution = 14608 s
[2026-03-14 10:18:27] 2026-03-14 09:17:14,611 | INFO     | . stage-out = 4 s
[2026-03-14 10:18:27] 2026-03-14 09:17:14,611 | INFO     | . log creation = 1 s
[2026-03-14 10:18:27] 2026-03-14 09:17:14,611 | INFO     | ..............................
[2026-03-14 10:18:27] 2026-03-14 09:17:14,761 | INFO     | 
[2026-03-14 10:18:27] 2026-03-14 09:17:14,762 | INFO     | job summary report
[2026-03-14 10:18:27] 2026-03-14 09:17:14,762 | INFO     | --------------------------------------------------
[2026-03-14 10:18:27] 2026-03-14 09:17:14,762 | INFO     | PanDA job id: 7044816588
[2026-03-14 10:18:27] 2026-03-14 09:17:14,762 | INFO     | task id: 48955010
[2026-03-14 10:18:27] 2026-03-14 09:17:14,762 | INFO     | errors: (none)
[2026-03-14 10:18:27] 2026-03-14 09:17:14,762 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 10:18:27] 2026-03-14 09:17:14,762 | INFO     | pilot state: finished 
[2026-03-14 10:18:27] 2026-03-14 09:17:14,762 | INFO     | transexitcode: 0
[2026-03-14 10:18:27] 2026-03-14 09:17:14,762 | INFO     | exeerrorcode: 0
[2026-03-14 10:18:27] 2026-03-14 09:17:14,763 | INFO     | exeerrordiag: 
[2026-03-14 10:18:27] 2026-03-14 09:17:14,763 | INFO     | exitcode: 0
[2026-03-14 10:18:27] 2026-03-14 09:17:14,763 | INFO     | exitmsg: OK
[2026-03-14 10:18:27] 2026-03-14 09:17:14,763 | INFO     | cpuconsumptiontime: 52978 s
[2026-03-14 10:18:27] 2026-03-14 09:17:14,763 | INFO     | nevents: 400
[2026-03-14 10:18:27] 2026-03-14 09:17:14,763 | INFO     | neventsw: 0
[2026-03-14 10:18:27] 2026-03-14 09:17:14,763 | INFO     | pid: 32056
[2026-03-14 10:18:27] 2026-03-14 09:17:14,763 | INFO     | pgrp: 32056
[2026-03-14 10:18:27] 2026-03-14 09:17:14,763 | INFO     | corecount: 8
[2026-03-14 10:18:27] 2026-03-14 09:17:14,763 | INFO     | event service: False
[2026-03-14 10:18:27] 2026-03-14 09:17:14,764 | INFO     | sizes: {0: 2279089, 1: 2279775, 2: 2280176, 3: 2280264, 13: 2280264, 14762: 2311262, 14767: 2320262, 14770: 2320318, 14772: 2320512}
[2026-03-14 10:18:27] 2026-03-14 09:17:14,764 | INFO     | --------------------------------------------------
[2026-03-14 10:18:27] 2026-03-14 09:17:14,764 | INFO     | 
[2026-03-14 10:18:27] 2026-03-14 09:17:14,764 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2026-03-14 10:18:27] 2026-03-14 09:17:15,205 | INFO     | time since job start (14785s) is within the limit (345600.0s)
[2026-03-14 10:18:27] 2026-03-14 09:17:15,409 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 10:18:27] 2026-03-14 09:17:15,409 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 10:18:27] 2026-03-14 09:17:15,409 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 10:18:27] 2026-03-14 09:17:15,409 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 10:18:27] 2026-03-14 09:17:15,409 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 10:18:27] 2026-03-14 09:17:15,409 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 10:18:27] 2026-03-14 09:17:15,410 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 10:18:27] 2026-03-14 09:17:15,410 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 10:18:27] 2026-03-14 09:17:15,410 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 10:18:27] 2026-03-14 09:17:15,410 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 10:18:27] 2026-03-14 09:17:15,410 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 10:18:27] 2026-03-14 09:17:15,410 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 10:18:27] 2026-03-14 09:17:15,410 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 10:18:27] 2026-03-14 09:17:15,410 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 10:18:27] 2026-03-14 09:17:15,410 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 10:18:27] 2026-03-14 09:17:15,410 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 10:18:27] 2026-03-14 09:17:15,410 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 10:18:27] 2026-03-14 09:17:15,411 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 10:18:27] 2026-03-14 09:17:15,411 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 10:18:27] 2026-03-14 09:17:15,411 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 10:18:27] 2026-03-14 09:17:15,411 | INFO     | job 7044816588 has completed (purged errors)
[2026-03-14 10:18:27] 2026-03-14 09:17:15,411 | INFO     | overall cleanup function is called
[2026-03-14 10:18:27] 2026-03-14 09:17:16,419 | INFO     | --- collectZombieJob: --- 10, [32056]
[2026-03-14 10:18:27] 2026-03-14 09:17:16,420 | INFO     | zombie collector waiting for pid 32056
[2026-03-14 10:18:27] 2026-03-14 09:17:16,420 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 10:18:27] 2026-03-14 09:17:16,420 | INFO     | collected zombie processes
[2026-03-14 10:18:27] 2026-03-14 09:17:16,420 | INFO     | will attempt to kill all subprocesses of pid=32056
[2026-03-14 10:18:27] 2026-03-14 09:17:16,494 | INFO     | process IDs to be killed: [32056] (in reverse order)
[2026-03-14 10:18:27] 2026-03-14 09:17:17,384 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 10:18:27] 2026-03-14 09:17:17,384 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 10:18:27] 2026-03-14 09:17:17,386 | INFO     | did not find any defunct processes belonging to 32056
[2026-03-14 10:18:27] 2026-03-14 09:17:17,388 | INFO     | did not find any defunct processes belonging to 32056
[2026-03-14 10:18:27] 2026-03-14 09:17:17,389 | INFO     | ready for new job
[2026-03-14 10:18:27] 2026-03-14 09:17:17,389 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 10:18:27] 2026-03-14 09:17:17,391 | INFO     | **************************************
[2026-03-14 10:18:27] 2026-03-14 09:17:17,391 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 10:18:27] 2026-03-14 09:17:17,391 | INFO     | **************************************
[2026-03-14 10:18:27] 2026-03-14 09:17:17,391 | INFO     | 
[2026-03-14 10:18:27] 2026-03-14 09:17:17,392 | INFO     | pilot is running in a VM
[2026-03-14 10:18:27] 2026-03-14 09:17:17,392 | INFO     | architecture information:
[2026-03-14 10:18:27] 2026-03-14 09:17:17,393 | INFO     | executing command: cat /etc/os-release
[2026-03-14 10:18:27] 2026-03-14 09:17:17,658 | INFO     | cat /etc/os-release:
[2026-03-14 10:18:27] NAME="CentOS Linux"
[2026-03-14 10:18:27] VERSION="7 (Core)"
[2026-03-14 10:18:27] ID="centos"
[2026-03-14 10:18:27] ID_LIKE="rhel fedora"
[2026-03-14 10:18:27] VERSION_ID="7"
[2026-03-14 10:18:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 10:18:27] ANSI_COLOR="0;31"
[2026-03-14 10:18:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 10:18:27] HOME_URL="https://www.centos.org/"
[2026-03-14 10:18:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 10:18:27] 
[2026-03-14 10:18:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 10:18:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 10:18:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 10:18:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 10:18:27] 
[2026-03-14 10:18:27] 2026-03-14 09:17:17,658 | INFO     | **************************************
[2026-03-14 10:18:27] 2026-03-14 09:17:18,162 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2026-03-14 10:18:27] 2026-03-14 09:17:18,403 | INFO     | sufficient remaining disk space (493393805312 B)
[2026-03-14 10:18:27] 2026-03-14 09:17:18,403 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 10:18:27] 2026-03-14 09:17:18,403 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 10:18:27] 2026-03-14 09:17:18,404 | INFO     | update_server=False
[2026-03-14 10:18:27] 2026-03-14 09:17:18,404 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 10:18:27] 2026-03-14 09:17:18,404 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 10:18:27] 2026-03-14 09:17:18,405 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 10:18:27] 2026-03-14 09:17:18,406 | INFO     | aborting loop
[2026-03-14 10:18:27] 2026-03-14 09:17:18,710 | INFO     | all job control threads have been joined
[2026-03-14 10:18:27] 2026-03-14 09:17:19,030 | INFO     | all payload control threads have been joined
[2026-03-14 10:18:27] 2026-03-14 09:17:19,105 | INFO     | all data control threads have been joined
[2026-03-14 10:18:27] 2026-03-14 09:17:19,257 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 10:18:27] 2026-03-14 09:17:19,410 | INFO     | [job] retrieve thread has finished
[2026-03-14 10:18:27] 2026-03-14 09:17:19,411 | INFO     | [job] job monitor thread has finished
[2026-03-14 10:18:27] 2026-03-14 09:17:19,449 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 10:18:27] 2026-03-14 09:17:19,500 | INFO     | [payload] failed_post thread has finished
[2026-03-14 10:18:27] 2026-03-14 09:17:19,632 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 10:18:27] 2026-03-14 09:17:19,716 | INFO     | [job] control thread has finished
[2026-03-14 10:18:27] 2026-03-14 09:17:19,777 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 10:18:27] 2026-03-14 09:17:19,844 | INFO     | [data] copytool_in thread has finished
[2026-03-14 10:18:27] 2026-03-14 09:17:20,036 | INFO     | [payload] control thread has finished
[2026-03-14 10:18:27] 2026-03-14 09:17:20,111 | INFO     | [data] control thread has finished
[2026-03-14 10:18:27] 2026-03-14 09:17:20,147 | INFO     | [job] validate thread has finished
[2026-03-14 10:18:27] 2026-03-14 09:17:20,301 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 10:18:27] 2026-03-14 09:17:20,411 | INFO     | [data] copytool_out thread has finished
[2026-03-14 10:18:27] 2026-03-14 09:17:20,624 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 10:18:27] 2026-03-14 09:17:20,725 | INFO     | [payload] validate_post thread has finished
[2026-03-14 10:18:27] 2026-03-14 09:17:20,782 | INFO     | [job] queue monitor thread has finished
[2026-03-14 10:18:27] 2026-03-14 09:17:23,266 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 10:18:27] 2026-03-14 09:17:48,400 | INFO     | PID=27597 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-14 10:18:27] 2026-03-14 09:17:48,400 | INFO     | .. there are 2 such processes running
[2026-03-14 10:18:27] 2026-03-14 09:17:48,400 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 10:18:27] 2026-03-14 09:17:48,401 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 10:18:27] 2026-03-14 09:17:48,401 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 10:18:27] 2026-03-14 09:18:15,047 | INFO     | [monitor] cgroup control has ended
[2026-03-14 10:18:27] 2026-03-14 09:18:16,636 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140426223093568)>', '<ExcThread(monitor, started 140425935435520)>']
[2026-03-14 10:18:27] 2026-03-14 09:18:17,572 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 10:18:27] 2026-03-14 09:18:17,573 | INFO     | [monitor] control thread has ended
[2026-03-14 10:18:27] 2026-03-14 09:18:21,662 | INFO     | all workflow threads have been joined
[2026-03-14 10:18:27] 2026-03-14 09:18:21,663 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 10:18:27] 2026-03-14 09:18:21,663 | INFO     | traces error code: 0
[2026-03-14 10:18:27] 2026-03-14 09:18:21,663 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 10:18:27] 2026-03-14 09:18:22,128 [wrapper] ==== pilot stdout END ====
[2026-03-14 10:18:27] 2026-03-14 09:18:22,234 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 10:18:27] 2026-03-14 09:18:22,343 [wrapper] pilotpid: 27597
[2026-03-14 10:18:27] 2026-03-14 09:18:22,449 [wrapper] Pilot exit status: 0
[2026-03-14 10:18:27] 2026-03-14 09:18:22,956 [wrapper] pandaids: 7044816588
[2026-03-14 10:18:27] 2026-03-14 09:18:24,038 [wrapper] cleanup supervisor_pilot  6577 27598
[2026-03-14 10:18:27] 2026-03-14 09:18:24,139 [wrapper] Test setup, not cleaning
[2026-03-14 10:18:27] 2026-03-14 09:18:24,206 [wrapper] apfmon messages muted
[2026-03-14 10:18:27] 2026-03-14 09:18:24,321 [wrapper] ==== wrapper stdout END ====
[2026-03-14 10:18:27] 2026-03-14 09:18:24,392 [wrapper] ==== wrapper stderr END ====
[2026-03-14 10:18:27]  *** Error codes and diagnostics ***
[2026-03-14 10:18:27]     "exeErrorCode": 0,
[2026-03-14 10:18:27]     "exeErrorDiag": "",
[2026-03-14 10:18:27]     "pilotErrorCode": 0,
[2026-03-14 10:18:27]     "pilotErrorDiag": "",
[2026-03-14 10:18:27]  *** Listing of results directory ***
[2026-03-14 10:18:27] total 628208
[2026-03-14 10:18:27] -rw-r--r--. 1 boinc boinc    585013 Mar 13 19:06 pilot3.tar.gz
[2026-03-14 10:18:27] -rwx------. 1 boinc boinc     36322 Mar 13 19:07 runpilot2-wrapper.sh
[2026-03-14 10:18:27] -rw-r--r--. 1 boinc boinc      5111 Mar 13 19:09 queuedata.json
[2026-03-14 10:18:27] -rw-r--r--. 1 boinc boinc       100 Mar 14 06:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 10:18:27] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 06:04 run_atlas
[2026-03-14 10:18:27] -rw-r--r--. 1 boinc boinc       105 Mar 14 06:04 job.xml
[2026-03-14 10:18:27] -rw-r--r--. 1 boinc boinc      6392 Mar 14 06:04 init_data.xml
[2026-03-14 10:18:27] -rw-r--r--. 2 boinc boinc 444931351 Mar 14 06:04 EVNT.46701403._001654.pool.root.1
[2026-03-14 10:18:27] -rw-r--r--. 2 boinc boinc     15845 Mar 14 06:04 start_atlas.sh
[2026-03-14 10:18:27] drwxrwx--x. 2 boinc boinc        68 Mar 14 06:04 shared
[2026-03-14 10:18:27] -rw-r--r--. 2 boinc boinc    597528 Mar 14 06:04 input.tar.gz
[2026-03-14 10:18:27] -rw-r--r--. 1 boinc boinc         0 Mar 14 06:04 boinc_lockfile
[2026-03-14 10:18:27] -rw-r--r--. 1 boinc boinc      2563 Mar 14 06:04 pandaJob.out
[2026-03-14 10:18:27] -rw-------. 1 boinc boinc       415 Mar 14 06:10 workernode_map.json
[2026-03-14 10:18:27] -rw-------. 1 boinc boinc   1004579 Mar 14 06:10 agis_schedconf.cvmfs.json
[2026-03-14 10:18:27] drwx------. 5 boinc boinc      4096 Mar 14 06:10 pilot3
[2026-03-14 10:18:27] -rw-------. 1 boinc boinc 189324200 Mar 14 10:15 HITS.48955010._032986.pool.root.1
[2026-03-14 10:18:27] -rw-r--r--. 1 boinc boinc       531 Mar 14 10:15 boinc_task_state.xml
[2026-03-14 10:18:27] -rw-------. 1 boinc boinc        95 Mar 14 10:16 pilot_heartbeat.json
[2026-03-14 10:18:27] -rw-------. 1 boinc boinc      1012 Mar 14 10:17 memory_monitor_summary.json
[2026-03-14 10:18:27] -rw-------. 1 boinc boinc   1511579 Mar 14 10:17 agis_ddmendpoints.agis.ALL.json
[2026-03-14 10:18:27] -rw-------. 1 boinc boinc    476788 Mar 14 10:17 log.48955010._032986.job.log.tgz.1
[2026-03-14 10:18:27] -rw-------. 1 boinc boinc      6323 Mar 14 10:17 heartbeat.json
[2026-03-14 10:18:27] -rw-r--r--. 1 boinc boinc      8192 Mar 14 10:18 boinc_mmap_file
[2026-03-14 10:18:27] -rw-r--r--. 1 boinc boinc        28 Mar 14 10:18 wrapper_checkpoint.txt
[2026-03-14 10:18:27] -rw-------. 1 boinc boinc      4881 Mar 14 10:18 pilotlog.txt
[2026-03-14 10:18:27] -rw-------. 1 boinc boinc   2080636 Mar 14 10:18 log.48955010._032986.job.log.1
[2026-03-14 10:18:27] -rw-------. 1 boinc boinc       357 Mar 14 10:18 output.list
[2026-03-14 10:18:27] -rw-r--r--. 1 boinc boinc       620 Mar 14 10:18 runtime_log
[2026-03-14 10:18:27] -rw-------. 1 boinc boinc   2570240 Mar 14 10:18 result.tar.gz
[2026-03-14 10:18:27] -rw-r--r--. 1 boinc boinc      8832 Mar 14 10:18 runtime_log.err
[2026-03-14 10:18:27] -rw-------. 1 boinc boinc       656 Mar 14 10:18 RcYKDmI6LL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmyRqLDmeaG46m.diag
[2026-03-14 10:18:27] -rw-r--r--. 1 boinc boinc     20743 Mar 14 10:18 stderr.txt
[2026-03-14 10:18:27] HITS file was successfully produced:
[2026-03-14 10:18:27] -rw-------. 1 boinc boinc 189324200 Mar 14 10:15 shared/HITS.pool.root.1
[2026-03-14 10:18:27]  *** Contents of shared directory: ***
[2026-03-14 10:18:27] total 622504
[2026-03-14 10:18:27] -rw-r--r--. 2 boinc boinc 444931351 Mar 14 06:04 ATLAS.root_0
[2026-03-14 10:18:27] -rw-r--r--. 2 boinc boinc     15845 Mar 14 06:04 start_atlas.sh
[2026-03-14 10:18:27] -rw-r--r--. 2 boinc boinc    597528 Mar 14 06:04 input.tar.gz
[2026-03-14 10:18:27] -rw-------. 1 boinc boinc 189324200 Mar 14 10:15 HITS.pool.root.1
[2026-03-14 10:18:27] -rw-------. 1 boinc boinc   2570240 Mar 14 10:18 result.tar.gz
10:18:28 (23580): run_atlas exited; CPU time 53132.130399
10:18:28 (23580): called boinc_finish(0)

</stderr_txt>
]]>

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