Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:13:02 (5642): wrapper (7.7.26015): starting
06:13:02 (5642): wrapper: running run_atlas (--nthreads 8)
[2026-03-14 06:13:02] Arguments: --nthreads 8
[2026-03-14 06:13:02] Threads: 8
[2026-03-14 06:13:02] Checking for CVMFS
[2026-03-14 06:13:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 06:13:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 06:13:06] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 06:13:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 06:13:07] 2.11.2.0 4221 127139 105128 157266 1 53 22925373 25165824 96 130560 157 37707259 99.821 26868805 869 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-14 06:13:07] CVMFS is ok
[2026-03-14 06:13:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 06:13:07] Checking for apptainer binary...
[2026-03-14 06:13:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 06:13:07] Running /usr/bin/apptainer --version
[2026-03-14 06:13:07] apptainer version 1.3.2-1.el7
[2026-03-14 06:13:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 06:13:36] cg-vwn381.simple-grid.lan
[2026-03-14 06:13:36] apptainer works
[2026-03-14 06:13:36] Set ATHENA_PROC_NUMBER=8
[2026-03-14 06:13:36] Set ATHENA_CORE_NUMBER=8
[2026-03-14 06:13:36] Starting ATLAS job with PandaID=7053763016
[2026-03-14 06:13:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/23 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 11:17:50]  *** The last 200 lines of the pilot log: ***
[2026-03-14 11:17:50] 2026-03-14 10:16:40,964 | INFO     | total number of processed events: 400 (read)
[2026-03-14 11:17:50] 2026-03-14 10:16:40,966 | INFO     | using path: /var/lib/boinc/slots/23/PanDA_Pilot-7053763016/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 11:17:50] 2026-03-14 10:16:40,967 | INFO     | extracted standard info from prmon json
[2026-03-14 11:17:50] 2026-03-14 10:16:40,967 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 11:17:50] 2026-03-14 10:16:40,967 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 11:17:50] 2026-03-14 10:16:40,968 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 11:17:50] 2026-03-14 10:16:40,968 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 11:17:50] 2026-03-14 10:16:40,974 | INFO     | fitting pss+swap vs Time
[2026-03-14 11:17:50] 2026-03-14 10:16:40,974 | INFO     | sum of square deviations: 7330250928.0
[2026-03-14 11:17:50] 2026-03-14 10:16:40,977 | INFO     | sum of deviations: 111206087759.00002
[2026-03-14 11:17:50] 2026-03-14 10:16:40,977 | INFO     | mean x: 1773474615.0
[2026-03-14 11:17:50] 2026-03-14 10:16:40,977 | INFO     | mean y: 2447158.299651568
[2026-03-14 11:17:50] 2026-03-14 10:16:40,978 | INFO     | intersect: -26902658220.931747
[2026-03-14 11:17:50] 2026-03-14 10:16:40,978 | INFO     | chi2: 8.906442479933647
[2026-03-14 11:17:50] 2026-03-14 10:16:40,982 | INFO     | sum of square deviations: 6953769450.5
[2026-03-14 11:17:50] 2026-03-14 10:16:40,985 | INFO     | sum of deviations: 128400262038.50006
[2026-03-14 11:17:50] 2026-03-14 10:16:40,985 | INFO     | mean x: 1773474462.5
[2026-03-14 11:17:50] 2026-03-14 10:16:40,985 | INFO     | mean y: 2454014.131205674
[2026-03-14 11:17:50] 2026-03-14 10:16:40,985 | INFO     | intersect: -32744473724.063305
[2026-03-14 11:17:50] 2026-03-14 10:16:40,986 | INFO     | chi2: 8.20444075116527
[2026-03-14 11:17:50] 2026-03-14 10:16:40,986 | INFO     | current chi2=8.20444075116527 (change=7.881954330811626 %)
[2026-03-14 11:17:50] 2026-03-14 10:16:40,986 | INFO     | right removable region: 281
[2026-03-14 11:17:50] 2026-03-14 10:16:40,987 | INFO     | sum of square deviations: 6953769450.5
[2026-03-14 11:17:50] 2026-03-14 10:16:40,989 | INFO     | sum of deviations: 10215983997.5
[2026-03-14 11:17:50] 2026-03-14 10:16:40,990 | INFO     | mean x: 1773474767.5
[2026-03-14 11:17:50] 2026-03-14 10:16:40,990 | INFO     | mean y: 2488045.145390071
[2026-03-14 11:17:50] 2026-03-14 10:16:40,990 | INFO     | intersect: -2602975074.349793
[2026-03-14 11:17:50] 2026-03-14 10:16:40,990 | INFO     | chi2: 3.8314201063346482
[2026-03-14 11:17:50] 2026-03-14 10:16:40,991 | INFO     | current chi2=3.8314201063346482 (change=56.98147588145438 %)
[2026-03-14 11:17:50] 2026-03-14 10:16:40,991 | INFO     | sum of square deviations: 6590404498.0
[2026-03-14 11:17:50] 2026-03-14 10:16:40,994 | INFO     | sum of deviations: -65678537435.0
[2026-03-14 11:17:50] 2026-03-14 10:16:40,994 | INFO     | mean x: 1773474920.0
[2026-03-14 11:17:50] 2026-03-14 10:16:40,994 | INFO     | mean y: 2519860.379061372
[2026-03-14 11:17:50] 2026-03-14 10:16:40,994 | INFO     | intersect: 17676585080.291096
[2026-03-14 11:17:50] 2026-03-14 10:16:40,995 | INFO     | chi2: 1.1165591354997615
[2026-03-14 11:17:50] 2026-03-14 10:16:40,995 | INFO     | current chi2=1.1165591354997615 (change=70.85782544039722 %)
[2026-03-14 11:17:50] 2026-03-14 10:16:40,996 | INFO     | sum of square deviations: 6239923508.0
[2026-03-14 11:17:50] 2026-03-14 10:16:40,998 | INFO     | sum of deviations: -77158884292.50002
[2026-03-14 11:17:50] 2026-03-14 10:16:40,999 | INFO     | mean x: 1773475072.5
[2026-03-14 11:17:50] 2026-03-14 10:16:40,999 | INFO     | mean y: 2524825.393382353
[2026-03-14 11:17:50] 2026-03-14 10:16:40,999 | INFO     | intersect: 21932177927.586597
[2026-03-14 11:17:50] 2026-03-14 10:16:40,999 | INFO     | chi2: 1.0023642663686818
[2026-03-14 11:17:50] 2026-03-14 10:16:40,999 | INFO     | current chi2=1.0023642663686818 (change=10.227391053494637 %)
[2026-03-14 11:17:50] 2026-03-14 10:16:41,000 | INFO     | left removable region: 30
[2026-03-14 11:17:50] 2026-03-14 10:16:41,000 | INFO     | sum of square deviations: 4903347750.0
[2026-03-14 11:17:50] 2026-03-14 10:16:41,002 | INFO     | sum of deviations: -33170971070.999996
[2026-03-14 11:17:50] 2026-03-14 10:16:41,003 | INFO     | mean x: 1773475347.0
[2026-03-14 11:17:50] 2026-03-14 10:16:41,003 | INFO     | mean y: 2521704.111553785
[2026-03-14 11:17:50] 2026-03-14 10:16:41,003 | INFO     | intersect: 12000018604.156769
[2026-03-14 11:17:50] 2026-03-14 10:16:41,003 | INFO     | chi2: 0.16826223054721087
[2026-03-14 11:17:50] 2026-03-14 10:16:41,004 | INFO     | current memory leak: -6.76 B/s (using 251 data points, chi2=0.17)
[2026-03-14 11:17:50] 2026-03-14 10:16:41,004 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-03-14 11:17:50] 2026-03-14 10:16:41,005 | INFO     | ..............................
[2026-03-14 11:17:50] 2026-03-14 10:16:41,005 | INFO     | . Timing measurements:
[2026-03-14 11:17:50] 2026-03-14 10:16:41,005 | INFO     | . get job = 0 s
[2026-03-14 11:17:50] 2026-03-14 10:16:41,005 | INFO     | . initial setup = 118 s
[2026-03-14 11:17:50] 2026-03-14 10:16:41,005 | INFO     | . payload setup = 148 s
[2026-03-14 11:17:50] 2026-03-14 10:16:41,005 | INFO     | . stage-in = 0 s
[2026-03-14 11:17:50] 2026-03-14 10:16:41,005 | INFO     | . payload execution = 17622 s
[2026-03-14 11:17:50] 2026-03-14 10:16:41,005 | INFO     | . stage-out = 3 s
[2026-03-14 11:17:50] 2026-03-14 10:16:41,006 | INFO     | . log creation = 1 s
[2026-03-14 11:17:50] 2026-03-14 10:16:41,006 | INFO     | ..............................
[2026-03-14 11:17:50] 2026-03-14 10:16:41,123 | INFO     | 
[2026-03-14 11:17:50] 2026-03-14 10:16:41,123 | INFO     | job summary report
[2026-03-14 11:17:50] 2026-03-14 10:16:41,123 | INFO     | --------------------------------------------------
[2026-03-14 11:17:50] 2026-03-14 10:16:41,123 | INFO     | PanDA job id: 7053763016
[2026-03-14 11:17:50] 2026-03-14 10:16:41,123 | INFO     | task id: 48967085
[2026-03-14 11:17:50] 2026-03-14 10:16:41,124 | INFO     | errors: (none)
[2026-03-14 11:17:50] 2026-03-14 10:16:41,124 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 11:17:50] 2026-03-14 10:16:41,124 | INFO     | pilot state: finished 
[2026-03-14 11:17:50] 2026-03-14 10:16:41,124 | INFO     | transexitcode: 0
[2026-03-14 11:17:50] 2026-03-14 10:16:41,124 | INFO     | exeerrorcode: 0
[2026-03-14 11:17:50] 2026-03-14 10:16:41,124 | INFO     | exeerrordiag: 
[2026-03-14 11:17:50] 2026-03-14 10:16:41,124 | INFO     | exitcode: 0
[2026-03-14 11:17:50] 2026-03-14 10:16:41,124 | INFO     | exitmsg: OK
[2026-03-14 11:17:50] 2026-03-14 10:16:41,124 | INFO     | cpuconsumptiontime: 66843 s
[2026-03-14 11:17:50] 2026-03-14 10:16:41,125 | INFO     | nevents: 400
[2026-03-14 11:17:50] 2026-03-14 10:16:41,125 | INFO     | neventsw: 0
[2026-03-14 11:17:50] 2026-03-14 10:16:41,125 | INFO     | pid: 14055
[2026-03-14 11:17:50] 2026-03-14 10:16:41,125 | INFO     | pgrp: 14055
[2026-03-14 11:17:50] 2026-03-14 10:16:41,125 | INFO     | corecount: 8
[2026-03-14 11:17:50] 2026-03-14 10:16:41,125 | INFO     | event service: False
[2026-03-14 11:17:50] 2026-03-14 10:16:41,125 | INFO     | sizes: {0: 2279152, 1: 2279838, 2: 2280299, 12: 2280299, 17775: 2312450, 17776: 2312449, 17780: 2321689, 17782: 2321827}
[2026-03-14 11:17:50] 2026-03-14 10:16:41,125 | INFO     | --------------------------------------------------
[2026-03-14 11:17:50] 2026-03-14 10:16:41,125 | INFO     | 
[2026-03-14 11:17:50] 2026-03-14 10:16:41,126 | INFO     | executing command: ls -lF /var/lib/boinc/slots/23
[2026-03-14 11:17:50] 2026-03-14 10:16:41,510 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 11:17:50] 2026-03-14 10:16:41,510 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 11:17:50] 2026-03-14 10:16:41,510 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 11:17:50] 2026-03-14 10:16:41,510 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 11:17:50] 2026-03-14 10:16:41,510 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 11:17:50] 2026-03-14 10:16:41,510 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 11:17:50] 2026-03-14 10:16:41,510 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 11:17:50] 2026-03-14 10:16:41,511 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 11:17:50] 2026-03-14 10:16:41,511 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 11:17:50] 2026-03-14 10:16:41,511 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 11:17:50] 2026-03-14 10:16:41,511 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 11:17:50] 2026-03-14 10:16:41,511 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 11:17:50] 2026-03-14 10:16:41,511 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 11:17:50] 2026-03-14 10:16:41,511 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 11:17:50] 2026-03-14 10:16:41,511 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 11:17:50] 2026-03-14 10:16:41,511 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 11:17:50] 2026-03-14 10:16:41,511 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 11:17:50] 2026-03-14 10:16:41,512 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 11:17:50] 2026-03-14 10:16:41,512 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 11:17:50] 2026-03-14 10:16:41,512 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 11:17:50] 2026-03-14 10:16:41,512 | INFO     | job 7053763016 has completed (purged errors)
[2026-03-14 11:17:50] 2026-03-14 10:16:41,512 | INFO     | overall cleanup function is called
[2026-03-14 11:17:50] 2026-03-14 10:16:42,521 | INFO     | --- collectZombieJob: --- 10, [14055]
[2026-03-14 11:17:50] 2026-03-14 10:16:42,521 | INFO     | zombie collector waiting for pid 14055
[2026-03-14 11:17:50] 2026-03-14 10:16:42,521 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 11:17:50] 2026-03-14 10:16:42,521 | INFO     | collected zombie processes
[2026-03-14 11:17:50] 2026-03-14 10:16:42,522 | INFO     | will attempt to kill all subprocesses of pid=14055
[2026-03-14 11:17:50] 2026-03-14 10:16:42,607 | INFO     | process IDs to be killed: [14055] (in reverse order)
[2026-03-14 11:17:50] 2026-03-14 10:16:43,568 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 11:17:50] 2026-03-14 10:16:43,569 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 11:17:50] 2026-03-14 10:16:43,571 | INFO     | did not find any defunct processes belonging to 14055
[2026-03-14 11:17:50] 2026-03-14 10:16:43,573 | INFO     | did not find any defunct processes belonging to 14055
[2026-03-14 11:17:50] 2026-03-14 10:16:43,573 | INFO     | ready for new job
[2026-03-14 11:17:50] 2026-03-14 10:16:43,573 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 11:17:50] 2026-03-14 10:16:43,575 | INFO     | **************************************
[2026-03-14 11:17:50] 2026-03-14 10:16:43,576 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 11:17:50] 2026-03-14 10:16:43,576 | INFO     | **************************************
[2026-03-14 11:17:50] 2026-03-14 10:16:43,576 | INFO     | 
[2026-03-14 11:17:50] 2026-03-14 10:16:43,576 | INFO     | pilot is running in a VM
[2026-03-14 11:17:50] 2026-03-14 10:16:43,577 | INFO     | architecture information:
[2026-03-14 11:17:50] 2026-03-14 10:16:43,580 | INFO     | executing command: cat /etc/os-release
[2026-03-14 11:17:50] 2026-03-14 10:16:43,804 | INFO     | cat /etc/os-release:
[2026-03-14 11:17:50] NAME="CentOS Linux"
[2026-03-14 11:17:50] VERSION="7 (Core)"
[2026-03-14 11:17:50] ID="centos"
[2026-03-14 11:17:50] ID_LIKE="rhel fedora"
[2026-03-14 11:17:50] VERSION_ID="7"
[2026-03-14 11:17:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 11:17:50] ANSI_COLOR="0;31"
[2026-03-14 11:17:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 11:17:50] HOME_URL="https://www.centos.org/"
[2026-03-14 11:17:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 11:17:50] 
[2026-03-14 11:17:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 11:17:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 11:17:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 11:17:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 11:17:50] 
[2026-03-14 11:17:50] 2026-03-14 10:16:43,805 | INFO     | **************************************
[2026-03-14 11:17:50] 2026-03-14 10:16:44,308 | INFO     | executing command: df -mP /var/lib/boinc/slots/23
[2026-03-14 11:17:50] 2026-03-14 10:16:44,515 | INFO     | sufficient remaining disk space (495666069504 B)
[2026-03-14 11:17:50] 2026-03-14 10:16:44,516 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 11:17:50] 2026-03-14 10:16:44,516 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 11:17:50] 2026-03-14 10:16:44,516 | INFO     | update_server=False
[2026-03-14 11:17:50] 2026-03-14 10:16:44,516 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 11:17:50] 2026-03-14 10:16:44,571 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-14 11:17:50] 2026-03-14 10:16:44,571 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-14 11:17:50] 2026-03-14 10:16:44,571 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 11:17:50] 2026-03-14 10:16:44,571 | INFO     | will abort loop
[2026-03-14 11:17:50] 2026-03-14 10:16:45,089 | INFO     | all data control threads have been joined
[2026-03-14 11:17:50] 2026-03-14 10:16:45,234 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 11:17:50] 2026-03-14 10:16:45,273 | INFO     | all payload control threads have been joined
[2026-03-14 11:17:50] 2026-03-14 10:16:45,522 | INFO     | [job] retrieve thread has finished
[2026-03-14 11:17:50] 2026-03-14 10:16:45,577 | INFO     | [job] job monitor thread has finished
[2026-03-14 11:17:50] 2026-03-14 10:16:45,584 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 11:17:50] 2026-03-14 10:16:45,703 | INFO     | all job control threads have been joined
[2026-03-14 11:17:50] 2026-03-14 10:16:45,727 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 11:17:50] 2026-03-14 10:16:45,790 | INFO     | [job] validate thread has finished
[2026-03-14 11:17:50] 2026-03-14 10:16:45,858 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 11:17:50] 2026-03-14 10:16:45,874 | INFO     | [payload] failed_post thread has finished
[2026-03-14 11:17:50] 2026-03-14 10:16:45,889 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 11:17:50] 2026-03-14 10:16:46,095 | INFO     | [data] control thread has finished
[2026-03-14 11:17:50] 2026-03-14 10:16:46,137 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 11:17:50] 2026-03-14 10:16:46,188 | INFO     | [payload] validate_post thread has finished
[2026-03-14 11:17:50] 2026-03-14 10:16:46,279 | INFO     | [payload] control thread has finished
[2026-03-14 11:17:50] 2026-03-14 10:16:46,398 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 11:17:50] 2026-03-14 10:16:46,409 | INFO     | [data] copytool_in thread has finished
[2026-03-14 11:17:50] 2026-03-14 10:16:46,709 | INFO     | [job] control thread has finished
[2026-03-14 11:17:50] 2026-03-14 10:16:47,143 | INFO     | [job] queue monitor thread has finished
[2026-03-14 11:17:50] 2026-03-14 10:16:47,241 | INFO     | [data] copytool_out thread has finished
[2026-03-14 11:17:50] 2026-03-14 10:16:49,867 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 11:17:50] 2026-03-14 10:17:13,423 | INFO     | PID=9618 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-14 11:17:50] 2026-03-14 10:17:13,423 | INFO     | .. there are 2 such processes running
[2026-03-14 11:17:50] 2026-03-14 10:17:13,425 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 11:17:50] 2026-03-14 10:17:13,425 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 11:17:50] 2026-03-14 10:17:13,425 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 11:17:50] 2026-03-14 10:17:38,007 | INFO     | [monitor] cgroup control has ended
[2026-03-14 11:17:50] 2026-03-14 10:17:39,169 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140503623571264)>', '<ExcThread(monitor, started 140503177737984)>']
[2026-03-14 11:17:50] 2026-03-14 10:17:39,573 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 11:17:50] 2026-03-14 10:17:39,573 | INFO     | [monitor] control thread has ended
[2026-03-14 11:17:50] 2026-03-14 10:17:44,195 | INFO     | all workflow threads have been joined
[2026-03-14 11:17:50] 2026-03-14 10:17:44,195 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 11:17:50] 2026-03-14 10:17:44,195 | INFO     | traces error code: 0
[2026-03-14 11:17:50] 2026-03-14 10:17:44,196 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 11:17:50] 2026-03-14 10:17:44,449 [wrapper] ==== pilot stdout END ====
[2026-03-14 11:17:50] 2026-03-14 10:17:44,568 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 11:17:50] 2026-03-14 10:17:44,649 [wrapper] pilotpid: 9618
[2026-03-14 11:17:50] 2026-03-14 10:17:44,752 [wrapper] Pilot exit status: 0
[2026-03-14 11:17:50] 2026-03-14 10:17:45,159 [wrapper] pandaids: 7053763016
[2026-03-14 11:17:50] 2026-03-14 10:17:46,441 [wrapper] cleanup supervisor_pilot 20534 9619
[2026-03-14 11:17:50] 2026-03-14 10:17:46,533 [wrapper] Test setup, not cleaning
[2026-03-14 11:17:50] 2026-03-14 10:17:46,674 [wrapper] apfmon messages muted
[2026-03-14 11:17:50] 2026-03-14 10:17:46,769 [wrapper] ==== wrapper stdout END ====
[2026-03-14 11:17:50] 2026-03-14 10:17:46,886 [wrapper] ==== wrapper stderr END ====
[2026-03-14 11:17:50]  *** Error codes and diagnostics ***
[2026-03-14 11:17:50]     "exeErrorCode": 0,
[2026-03-14 11:17:50]     "exeErrorDiag": "",
[2026-03-14 11:17:50]     "pilotErrorCode": 0,
[2026-03-14 11:17:50]     "pilotErrorDiag": "",
[2026-03-14 11:17:50]  *** Listing of results directory ***
[2026-03-14 11:17:50] total 420736
[2026-03-14 11:17:50] -rw-r--r--. 1 boinc boinc    585013 Mar 13 19:06 pilot3.tar.gz
[2026-03-14 11:17:50] -rwx------. 1 boinc boinc     36322 Mar 13 19:07 runpilot2-wrapper.sh
[2026-03-14 11:17:50] -rw-r--r--. 1 boinc boinc      5111 Mar 13 19:08 queuedata.json
[2026-03-14 11:17:50] -rw-r--r--. 1 boinc boinc       100 Mar 14 06:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 11:17:50] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 06:13 run_atlas
[2026-03-14 11:17:50] -rw-r--r--. 1 boinc boinc       105 Mar 14 06:13 job.xml
[2026-03-14 11:17:50] -rw-r--r--. 2 boinc boinc 216965565 Mar 14 06:13 EVNT.48967083._000864.pool.root.1
[2026-03-14 11:17:50] drwxrwx--x. 2 boinc boinc        68 Mar 14 06:13 shared
[2026-03-14 11:17:50] -rw-r--r--. 2 boinc boinc    597532 Mar 14 06:13 input.tar.gz
[2026-03-14 11:17:50] -rw-r--r--. 1 boinc boinc      6392 Mar 14 06:13 init_data.xml
[2026-03-14 11:17:50] -rw-r--r--. 2 boinc boinc     15845 Mar 14 06:13 start_atlas.sh
[2026-03-14 11:17:50] -rw-r--r--. 1 boinc boinc         0 Mar 14 06:13 boinc_lockfile
[2026-03-14 11:17:50] -rw-r--r--. 1 boinc boinc      2563 Mar 14 06:13 pandaJob.out
[2026-03-14 11:17:50] -rw-------. 1 boinc boinc       415 Mar 14 06:20 workernode_map.json
[2026-03-14 11:17:50] -rw-------. 1 boinc boinc   1004571 Mar 14 06:20 agis_schedconf.cvmfs.json
[2026-03-14 11:17:50] drwx------. 5 boinc boinc      4096 Mar 14 06:20 pilot3
[2026-03-14 11:17:50] -rw-------. 1 boinc boinc 203917503 Mar 14 11:15 HITS.48967085._021174.pool.root.1
[2026-03-14 11:17:50] -rw-r--r--. 1 boinc boinc       530 Mar 14 11:15 boinc_task_state.xml
[2026-03-14 11:17:50] -rw-------. 1 boinc boinc      1012 Mar 14 11:16 memory_monitor_summary.json
[2026-03-14 11:17:50] -rw-------. 1 boinc boinc   1511579 Mar 14 11:16 agis_ddmendpoints.agis.ALL.json
[2026-03-14 11:17:50] -rw-------. 1 boinc boinc    523480 Mar 14 11:16 log.48967085._021174.job.log.tgz.1
[2026-03-14 11:17:50] -rw-------. 1 boinc boinc      6325 Mar 14 11:16 heartbeat.json
[2026-03-14 11:17:50] -rw-------. 1 boinc boinc        95 Mar 14 11:17 pilot_heartbeat.json
[2026-03-14 11:17:50] -rw-r--r--. 1 boinc boinc        28 Mar 14 11:17 wrapper_checkpoint.txt
[2026-03-14 11:17:50] -rw-r--r--. 1 boinc boinc      8192 Mar 14 11:17 boinc_mmap_file
[2026-03-14 11:17:50] -rw-------. 1 boinc boinc      5066 Mar 14 11:17 pilotlog.txt
[2026-03-14 11:17:50] -rw-------. 1 boinc boinc   2492965 Mar 14 11:17 log.48967085._021174.job.log.1
[2026-03-14 11:17:50] -rw-------. 1 boinc boinc       357 Mar 14 11:17 output.list
[2026-03-14 11:17:50] -rw-r--r--. 1 boinc boinc       620 Mar 14 11:17 runtime_log
[2026-03-14 11:17:50] -rw-------. 1 boinc boinc   3031040 Mar 14 11:17 result.tar.gz
[2026-03-14 11:17:50] -rw-r--r--. 1 boinc boinc      8832 Mar 14 11:17 runtime_log.err
[2026-03-14 11:17:50] -rw-------. 1 boinc boinc       656 Mar 14 11:17 dPAMDm95LL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmaQqLDm9KQPYo.diag
[2026-03-14 11:17:50] -rw-r--r--. 1 boinc boinc     20662 Mar 14 11:17 stderr.txt
[2026-03-14 11:17:50] HITS file was successfully produced:
[2026-03-14 11:17:50] -rw-------. 1 boinc boinc 203917503 Mar 14 11:15 shared/HITS.pool.root.1
[2026-03-14 11:17:50]  *** Contents of shared directory: ***
[2026-03-14 11:17:50] total 414584
[2026-03-14 11:17:50] -rw-r--r--. 2 boinc boinc 216965565 Mar 14 06:13 ATLAS.root_0
[2026-03-14 11:17:50] -rw-r--r--. 2 boinc boinc    597532 Mar 14 06:13 input.tar.gz
[2026-03-14 11:17:50] -rw-r--r--. 2 boinc boinc     15845 Mar 14 06:13 start_atlas.sh
[2026-03-14 11:17:50] -rw-------. 1 boinc boinc 203917503 Mar 14 11:15 HITS.pool.root.1
[2026-03-14 11:17:50] -rw-------. 1 boinc boinc   3031040 Mar 14 11:17 result.tar.gz
11:17:51 (5642): run_atlas exited; CPU time 67033.814364
11:17:51 (5642): called boinc_finish(0)

</stderr_txt>
]]>

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