Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:49:23 (3530): wrapper (7.7.26015): starting
03:49:23 (3530): wrapper: running run_atlas (--nthreads 8)
[2026-03-14 03:49:23] Arguments: --nthreads 8
[2026-03-14 03:49:23] Threads: 8
[2026-03-14 03:49:23] Checking for CVMFS
[2026-03-14 03:49:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 03:49:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 03:49:24] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 03:49:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 03:49:24] 2.11.2.0 13009 126995 131360 157261 2 54 20205022 25165824 598 130560 163 41308375 99.827 28964018 992 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-14 03:49:24] CVMFS is ok
[2026-03-14 03:49:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 03:49:24] Checking for apptainer binary...
[2026-03-14 03:49:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 03:49:24] Running /usr/bin/apptainer --version
[2026-03-14 03:49:24] apptainer version 1.3.2-1.el7
[2026-03-14 03:49:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 03:49:25] cg-vwn438.simple-grid.lan
[2026-03-14 03:49:25] apptainer works
[2026-03-14 03:49:25] Set ATHENA_PROC_NUMBER=8
[2026-03-14 03:49:25] Set ATHENA_CORE_NUMBER=8
[2026-03-14 03:49:26] Starting ATLAS job with PandaID=7053763401
[2026-03-14 03:49:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 06:38:18]  *** The last 200 lines of the pilot log: ***
[2026-03-14 06:38:18] 2026-03-14 05:37:28,841 | INFO     | mean y: 2455802.242424242
[2026-03-14 06:38:18] 2026-03-14 05:37:28,841 | INFO     | intersect: -13479841159.057129
[2026-03-14 06:38:18] 2026-03-14 05:37:28,842 | INFO     | chi2: 2.2763571435336902
[2026-03-14 06:38:18] 2026-03-14 05:37:28,842 | INFO     | sum of square deviations: 1270051720.0
[2026-03-14 06:38:18] 2026-03-14 05:37:28,843 | INFO     | sum of deviations: 20873119110.500008
[2026-03-14 06:38:18] 2026-03-14 05:37:28,843 | INFO     | mean x: 1773461474.5
[2026-03-14 06:38:18] 2026-03-14 05:37:28,844 | INFO     | mean y: 2468239.81875
[2026-03-14 06:38:18] 2026-03-14 05:37:28,844 | INFO     | intersect: -29144118479.595695
[2026-03-14 06:38:18] 2026-03-14 05:37:28,844 | INFO     | chi2: 1.5089197030114145
[2026-03-14 06:38:18] 2026-03-14 05:37:28,844 | INFO     | current chi2=1.5089197030114145 (change=33.71340225334538 %)
[2026-03-14 06:38:18] 2026-03-14 05:37:28,844 | INFO     | sum of square deviations: 1154663510.0
[2026-03-14 06:38:18] 2026-03-14 05:37:28,845 | INFO     | sum of deviations: 20114232720.0
[2026-03-14 06:38:18] 2026-03-14 05:37:28,846 | INFO     | mean x: 1773461322.0
[2026-03-14 06:38:18] 2026-03-14 05:37:28,846 | INFO     | mean y: 2467236.535483871
[2026-03-14 06:38:18] 2026-03-14 05:37:28,846 | INFO     | intersect: -30891220354.429314
[2026-03-14 06:38:18] 2026-03-14 05:37:28,846 | INFO     | chi2: 1.5105089566006946
[2026-03-14 06:38:18] 2026-03-14 05:37:28,846 | INFO     | current chi2=1.5105089566006946 (change=-0.10532393381227256 %)
[2026-03-14 06:38:18] 2026-03-14 05:37:28,846 | INFO     | right removable region: 154
[2026-03-14 06:38:18] 2026-03-14 05:37:28,847 | INFO     | sum of square deviations: 1270051720.0
[2026-03-14 06:38:18] 2026-03-14 05:37:28,848 | INFO     | sum of deviations: -13589156873.5
[2026-03-14 06:38:18] 2026-03-14 05:37:28,848 | INFO     | mean x: 1773461779.5
[2026-03-14 06:38:18] 2026-03-14 05:37:28,848 | INFO     | mean y: 2485387.36875
[2026-03-14 06:38:18] 2026-03-14 05:37:28,848 | INFO     | intersect: 18977972724.830856
[2026-03-14 06:38:18] 2026-03-14 05:37:28,848 | INFO     | chi2: 0.8502433378476427
[2026-03-14 06:38:18] 2026-03-14 05:37:28,849 | INFO     | current chi2=0.8502433378476427 (change=62.648948111552826 %)
[2026-03-14 06:38:18] 2026-03-14 05:37:28,849 | INFO     | sum of square deviations: 1154663510.0
[2026-03-14 06:38:18] 2026-03-14 05:37:28,850 | INFO     | sum of deviations: -12463490415.000002
[2026-03-14 06:38:18] 2026-03-14 05:37:28,850 | INFO     | mean x: 1773461932.0
[2026-03-14 06:38:18] 2026-03-14 05:37:28,850 | INFO     | mean y: 2483829.193548387
[2026-03-14 06:38:18] 2026-03-14 05:37:28,850 | INFO     | intersect: 19145312540.26054
[2026-03-14 06:38:18] 2026-03-14 05:37:28,851 | INFO     | chi2: 0.8351342830478666
[2026-03-14 06:38:18] 2026-03-14 05:37:28,851 | INFO     | current chi2=0.8351342830478666 (change=1.7770271317884199 %)
[2026-03-14 06:38:18] 2026-03-14 05:37:28,851 | INFO     | left removable region: 20
[2026-03-14 06:38:18] 2026-03-14 05:37:28,851 | INFO     | sum of square deviations: 746051197.5
[2026-03-14 06:38:18] 2026-03-14 05:37:28,852 | INFO     | sum of deviations: 1730311176.9999998
[2026-03-14 06:38:18] 2026-03-14 05:37:28,852 | INFO     | mean x: 1773461901.5
[2026-03-14 06:38:18] 2026-03-14 05:37:28,852 | INFO     | mean y: 2491700.2537313434
[2026-03-14 06:38:18] 2026-03-14 05:37:28,853 | INFO     | intersect: -4110685733.724079
[2026-03-14 06:38:18] 2026-03-14 05:37:28,853 | INFO     | chi2: 0.00013767463644622253
[2026-03-14 06:38:18] 2026-03-14 05:37:28,853 | INFO     | current memory leak: 2.32 B/s (using 134 data points, chi2=0.00)
[2026-03-14 06:38:18] 2026-03-14 05:37:28,854 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-03-14 06:38:18] 2026-03-14 05:37:28,854 | INFO     | ..............................
[2026-03-14 06:38:18] 2026-03-14 05:37:28,854 | INFO     | . Timing measurements:
[2026-03-14 06:38:18] 2026-03-14 05:37:28,854 | INFO     | . get job = 0 s
[2026-03-14 06:38:18] 2026-03-14 05:37:28,854 | INFO     | . initial setup = 9 s
[2026-03-14 06:38:18] 2026-03-14 05:37:28,854 | INFO     | . payload setup = 9 s
[2026-03-14 06:38:18] 2026-03-14 05:37:28,854 | INFO     | . stage-in = 0 s
[2026-03-14 06:38:18] 2026-03-14 05:37:28,855 | INFO     | . payload execution = 10027 s
[2026-03-14 06:38:18] 2026-03-14 05:37:28,855 | INFO     | . stage-out = 1 s
[2026-03-14 06:38:18] 2026-03-14 05:37:28,855 | INFO     | . log creation = 0 s
[2026-03-14 06:38:18] 2026-03-14 05:37:28,855 | INFO     | ..............................
[2026-03-14 06:38:18] 2026-03-14 05:37:29,261 | INFO     | 
[2026-03-14 06:38:18] 2026-03-14 05:37:29,261 | INFO     | job summary report
[2026-03-14 06:38:18] 2026-03-14 05:37:29,261 | INFO     | --------------------------------------------------
[2026-03-14 06:38:18] 2026-03-14 05:37:29,262 | INFO     | PanDA job id: 7053763401
[2026-03-14 06:38:18] 2026-03-14 05:37:29,262 | INFO     | task id: 48967085
[2026-03-14 06:38:18] 2026-03-14 05:37:29,262 | INFO     | errors: (none)
[2026-03-14 06:38:18] 2026-03-14 05:37:29,262 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 06:38:18] 2026-03-14 05:37:29,262 | INFO     | pilot state: finished 
[2026-03-14 06:38:18] 2026-03-14 05:37:29,262 | INFO     | transexitcode: 0
[2026-03-14 06:38:18] 2026-03-14 05:37:29,262 | INFO     | exeerrorcode: 0
[2026-03-14 06:38:18] 2026-03-14 05:37:29,262 | INFO     | exeerrordiag: 
[2026-03-14 06:38:18] 2026-03-14 05:37:29,262 | INFO     | exitcode: 0
[2026-03-14 06:38:18] 2026-03-14 05:37:29,263 | INFO     | exitmsg: OK
[2026-03-14 06:38:18] 2026-03-14 05:37:29,263 | INFO     | cpuconsumptiontime: 65848 s
[2026-03-14 06:38:18] 2026-03-14 05:37:29,263 | INFO     | nevents: 400
[2026-03-14 06:38:18] 2026-03-14 05:37:29,263 | INFO     | neventsw: 0
[2026-03-14 06:38:18] 2026-03-14 05:37:29,263 | INFO     | pid: 12000
[2026-03-14 06:38:18] 2026-03-14 05:37:29,263 | INFO     | pgrp: 12000
[2026-03-14 06:38:18] 2026-03-14 05:37:29,263 | INFO     | corecount: 8
[2026-03-14 06:38:18] 2026-03-14 05:37:29,263 | INFO     | event service: False
[2026-03-14 06:38:18] 2026-03-14 05:37:29,263 | INFO     | sizes: {0: 2279809, 1: 2280270, 12: 2280270, 10040: 2308851, 10042: 2318107}
[2026-03-14 06:38:18] 2026-03-14 05:37:29,263 | INFO     | --------------------------------------------------
[2026-03-14 06:38:18] 2026-03-14 05:37:29,264 | INFO     | 
[2026-03-14 06:38:18] 2026-03-14 05:37:29,264 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-03-14 06:38:18] 2026-03-14 05:37:29,289 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 06:38:18] 2026-03-14 05:37:29,290 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 06:38:18] 2026-03-14 05:37:29,290 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 06:38:18] 2026-03-14 05:37:29,290 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 06:38:18] 2026-03-14 05:37:29,290 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 06:38:18] 2026-03-14 05:37:29,290 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 06:38:18] 2026-03-14 05:37:29,290 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 06:38:18] 2026-03-14 05:37:29,291 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 06:38:18] 2026-03-14 05:37:29,291 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 06:38:18] 2026-03-14 05:37:29,291 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 06:38:18] 2026-03-14 05:37:29,291 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 06:38:18] 2026-03-14 05:37:29,291 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 06:38:18] 2026-03-14 05:37:29,291 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 06:38:18] 2026-03-14 05:37:29,291 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 06:38:18] 2026-03-14 05:37:29,291 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 06:38:18] 2026-03-14 05:37:29,291 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 06:38:18] 2026-03-14 05:37:29,292 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 06:38:18] 2026-03-14 05:37:29,292 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 06:38:18] 2026-03-14 05:37:29,292 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 06:38:18] 2026-03-14 05:37:29,292 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 06:38:18] 2026-03-14 05:37:29,292 | INFO     | job 7053763401 has completed (purged errors)
[2026-03-14 06:38:18] 2026-03-14 05:37:29,292 | INFO     | overall cleanup function is called
[2026-03-14 06:38:18] 2026-03-14 05:37:30,301 | INFO     | --- collectZombieJob: --- 10, [12000]
[2026-03-14 06:38:18] 2026-03-14 05:37:30,301 | INFO     | zombie collector waiting for pid 12000
[2026-03-14 06:38:18] 2026-03-14 05:37:30,301 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 06:38:18] 2026-03-14 05:37:30,301 | INFO     | collected zombie processes
[2026-03-14 06:38:18] 2026-03-14 05:37:30,301 | INFO     | will attempt to kill all subprocesses of pid=12000
[2026-03-14 06:38:18] 2026-03-14 05:37:30,377 | INFO     | process IDs to be killed: [12000] (in reverse order)
[2026-03-14 06:38:18] 2026-03-14 05:37:30,431 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 06:38:18] 2026-03-14 05:37:30,431 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 06:38:18] 2026-03-14 05:37:30,433 | INFO     | did not find any defunct processes belonging to 12000
[2026-03-14 06:38:18] 2026-03-14 05:37:30,435 | INFO     | did not find any defunct processes belonging to 12000
[2026-03-14 06:38:18] 2026-03-14 05:37:30,435 | INFO     | ready for new job
[2026-03-14 06:38:18] 2026-03-14 05:37:30,436 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 06:38:18] 2026-03-14 05:37:30,437 | INFO     | **************************************
[2026-03-14 06:38:18] 2026-03-14 05:37:30,438 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 06:38:18] 2026-03-14 05:37:30,438 | INFO     | **************************************
[2026-03-14 06:38:18] 2026-03-14 05:37:30,438 | INFO     | 
[2026-03-14 06:38:18] 2026-03-14 05:37:30,438 | INFO     | pilot is running in a VM
[2026-03-14 06:38:18] 2026-03-14 05:37:30,438 | INFO     | architecture information:
[2026-03-14 06:38:18] 2026-03-14 05:37:30,439 | INFO     | executing command: cat /etc/os-release
[2026-03-14 06:38:18] 2026-03-14 05:37:30,468 | INFO     | cat /etc/os-release:
[2026-03-14 06:38:18] NAME="CentOS Linux"
[2026-03-14 06:38:18] VERSION="7 (Core)"
[2026-03-14 06:38:18] ID="centos"
[2026-03-14 06:38:18] ID_LIKE="rhel fedora"
[2026-03-14 06:38:18] VERSION_ID="7"
[2026-03-14 06:38:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 06:38:18] ANSI_COLOR="0;31"
[2026-03-14 06:38:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 06:38:18] HOME_URL="https://www.centos.org/"
[2026-03-14 06:38:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 06:38:18] 
[2026-03-14 06:38:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 06:38:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 06:38:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 06:38:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 06:38:18] 
[2026-03-14 06:38:18] 2026-03-14 05:37:30,469 | INFO     | **************************************
[2026-03-14 06:38:18] 2026-03-14 05:37:30,893 | WARNING  | process 12000 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 06:38:18] 2026-03-14 05:37:30,948 | INFO     | using path: /var/lib/boinc/slots/5/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 06:38:18] 2026-03-14 05:37:30,949 | INFO     | using path: /var/lib/boinc/slots/5/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 06:38:18] 2026-03-14 05:37:30,950 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-14 06:38:18] 2026-03-14 05:37:30,950 | WARNING  | maxPSS not found in memory monitor output
[2026-03-14 06:38:18] 2026-03-14 05:37:30,951 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/slots/5/PanDA_Pilot-7053763401/payload.stdout) since it has not been created yet
[2026-03-14 06:38:18] 2026-03-14 05:37:30,951 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-03-14 06:38:18] 2026-03-14 05:37:30,972 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-03-14 06:38:18] 2026-03-14 05:37:30,980 | INFO     | sufficient remaining disk space (497101570048 B)
[2026-03-14 06:38:18] 2026-03-14 05:37:30,980 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-14 06:38:18] 2026-03-14 05:37:30,980 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/5/PanDA_Pilot-7053763401/HITS.48967085._021410.pool.root.1 since it does not exist
[2026-03-14 06:38:18] 2026-03-14 05:37:30,999 | INFO     | sufficient remaining disk space (497101570048 B)
[2026-03-14 06:38:18] 2026-03-14 05:37:30,999 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 06:38:18] 2026-03-14 05:37:30,999 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 06:38:18] 2026-03-14 05:37:31,000 | INFO     | update_server=False
[2026-03-14 06:38:18] 2026-03-14 05:37:31,000 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 06:38:18] 2026-03-14 05:37:31,053 | INFO     | number of running child processes to parent process 12000: 1
[2026-03-14 06:38:18] 2026-03-14 05:37:31,053 | INFO     | maximum number of monitored processes: 6
[2026-03-14 06:38:18] 2026-03-14 05:37:31,053 | INFO     | aborting job monitoring since job object (job id=7053763401) has expired
[2026-03-14 06:38:18] 2026-03-14 05:37:31,054 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 06:38:18] 2026-03-14 05:37:31,054 | INFO     | will abort loop
[2026-03-14 06:38:18] 2026-03-14 05:37:31,358 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 06:38:18] 2026-03-14 05:37:31,745 | INFO     | all data control threads have been joined
[2026-03-14 06:38:18] 2026-03-14 05:37:31,759 | INFO     | all job control threads have been joined
[2026-03-14 06:38:18] 2026-03-14 05:37:32,005 | INFO     | [job] retrieve thread has finished
[2026-03-14 06:38:18] 2026-03-14 05:37:32,059 | INFO     | [job] job monitor thread has finished
[2026-03-14 06:38:18] 2026-03-14 05:37:32,063 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 06:38:18] 2026-03-14 05:37:32,071 | INFO     | all payload control threads have been joined
[2026-03-14 06:38:18] 2026-03-14 05:37:32,253 | INFO     | [payload] failed_post thread has finished
[2026-03-14 06:38:18] 2026-03-14 05:37:32,336 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 06:38:18] 2026-03-14 05:37:32,355 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 06:38:18] 2026-03-14 05:37:32,449 | INFO     | [data] copytool_in thread has finished
[2026-03-14 06:38:18] 2026-03-14 05:37:32,751 | INFO     | [data] control thread has finished
[2026-03-14 06:38:18] 2026-03-14 05:37:32,752 | INFO     | [payload] validate_post thread has finished
[2026-03-14 06:38:18] 2026-03-14 05:37:32,765 | INFO     | [job] control thread has finished
[2026-03-14 06:38:18] 2026-03-14 05:37:33,076 | INFO     | [payload] control thread has finished
[2026-03-14 06:38:18] 2026-03-14 05:37:33,364 | INFO     | [data] copytool_out thread has finished
[2026-03-14 06:38:18] 2026-03-14 05:37:33,429 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 06:38:18] 2026-03-14 05:37:33,485 | INFO     | [job] validate thread has finished
[2026-03-14 06:38:18] 2026-03-14 05:37:33,983 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 06:38:18] 2026-03-14 05:37:34,475 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 06:38:18] 2026-03-14 05:37:34,988 | INFO     | [job] queue monitor thread has finished
[2026-03-14 06:38:18] 2026-03-14 05:37:38,481 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 06:38:18] 2026-03-14 05:38:01,420 | INFO     | PID=7563 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-14 06:38:18] 2026-03-14 05:38:01,420 | INFO     | .. there are 2 such processes running
[2026-03-14 06:38:18] 2026-03-14 05:38:01,420 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 06:38:18] 2026-03-14 05:38:01,420 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 06:38:18] 2026-03-14 05:38:01,420 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 06:38:18] 2026-03-14 05:38:10,771 | INFO     | [monitor] cgroup control has ended
[2026-03-14 06:38:18] 2026-03-14 05:38:12,781 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140082432935744)>', '<ExcThread(monitor, started 140082136725248)>']
[2026-03-14 06:38:18] 2026-03-14 05:38:13,475 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 06:38:18] 2026-03-14 05:38:13,475 | INFO     | [monitor] control thread has ended
[2026-03-14 06:38:18] 2026-03-14 05:38:17,806 | INFO     | all workflow threads have been joined
[2026-03-14 06:38:18] 2026-03-14 05:38:17,807 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 06:38:18] 2026-03-14 05:38:17,807 | INFO     | traces error code: 0
[2026-03-14 06:38:18] 2026-03-14 05:38:17,807 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 06:38:18] 2026-03-14 05:38:17,960 [wrapper] ==== pilot stdout END ====
[2026-03-14 06:38:18] 2026-03-14 05:38:17,968 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 06:38:18] 2026-03-14 05:38:17,980 [wrapper] pilotpid: 7563
[2026-03-14 06:38:18] 2026-03-14 05:38:17,992 [wrapper] Pilot exit status: 0
[2026-03-14 06:38:18] 2026-03-14 05:38:18,030 [wrapper] pandaids: 7053763401
[2026-03-14 06:38:18] 2026-03-14 05:38:18,072 [wrapper] cleanup supervisor_pilot 17382 7564
[2026-03-14 06:38:18] 2026-03-14 05:38:18,082 [wrapper] Test setup, not cleaning
[2026-03-14 06:38:18] 2026-03-14 05:38:18,090 [wrapper] apfmon messages muted
[2026-03-14 06:38:18] 2026-03-14 05:38:18,097 [wrapper] ==== wrapper stdout END ====
[2026-03-14 06:38:18] 2026-03-14 05:38:18,110 [wrapper] ==== wrapper stderr END ====
[2026-03-14 06:38:18]  *** Error codes and diagnostics ***
[2026-03-14 06:38:18]     "exeErrorCode": 0,
[2026-03-14 06:38:18]     "exeErrorDiag": "",
[2026-03-14 06:38:18]     "pilotErrorCode": 0,
[2026-03-14 06:38:18]     "pilotErrorDiag": "",
[2026-03-14 06:38:18]  *** Listing of results directory ***
[2026-03-14 06:38:18] total 408784
[2026-03-14 06:38:18] -rw-r--r--. 1 boinc boinc    585013 Mar 13 19:06 pilot3.tar.gz
[2026-03-14 06:38:18] -rwx------. 1 boinc boinc     36322 Mar 13 19:07 runpilot2-wrapper.sh
[2026-03-14 06:38:18] -rw-r--r--. 1 boinc boinc      5111 Mar 13 19:08 queuedata.json
[2026-03-14 06:38:18] -rw-r--r--. 1 boinc boinc       100 Mar 14 03:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 06:38:18] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 03:49 run_atlas
[2026-03-14 06:38:18] -rw-r--r--. 1 boinc boinc       105 Mar 14 03:49 job.xml
[2026-03-14 06:38:18] -rw-r--r--. 2 boinc boinc 213758537 Mar 14 03:49 EVNT.48967083._000874.pool.root.1
[2026-03-14 06:38:18] drwxrwx--x. 2 boinc boinc        68 Mar 14 03:49 shared
[2026-03-14 06:38:18] -rw-r--r--. 2 boinc boinc    597528 Mar 14 03:49 input.tar.gz
[2026-03-14 06:38:18] -rw-r--r--. 1 boinc boinc      6391 Mar 14 03:49 init_data.xml
[2026-03-14 06:38:18] -rw-r--r--. 2 boinc boinc     15845 Mar 14 03:49 start_atlas.sh
[2026-03-14 06:38:18] -rw-r--r--. 1 boinc boinc         0 Mar 14 03:49 boinc_lockfile
[2026-03-14 06:38:18] -rw-r--r--. 1 boinc boinc      2563 Mar 14 03:49 pandaJob.out
[2026-03-14 06:38:18] -rw-------. 1 boinc boinc   1006013 Mar 14 03:49 agis_schedconf.cvmfs.json
[2026-03-14 06:38:18] -rw-------. 1 boinc boinc   1511579 Mar 14 03:49 agis_ddmendpoints.agis.ALL.json
[2026-03-14 06:38:18] -rw-------. 1 boinc boinc       415 Mar 14 03:49 workernode_map.json
[2026-03-14 06:38:18] drwx------. 5 boinc boinc      4096 Mar 14 03:49 pilot3
[2026-03-14 06:38:18] -rw-------. 1 boinc boinc 197241787 Mar 14 06:36 HITS.48967085._021410.pool.root.1
[2026-03-14 06:38:18] -rw-------. 1 boinc boinc        95 Mar 14 06:37 pilot_heartbeat.json
[2026-03-14 06:38:18] -rw-r--r--. 1 boinc boinc       530 Mar 14 06:37 boinc_task_state.xml
[2026-03-14 06:38:18] -rw-------. 1 boinc boinc      1017 Mar 14 06:37 memory_monitor_summary.json
[2026-03-14 06:38:18] -rw-------. 1 boinc boinc    400041 Mar 14 06:37 log.48967085._021410.job.log.tgz.1
[2026-03-14 06:38:18] -rw-------. 1 boinc boinc      6314 Mar 14 06:37 heartbeat.json
[2026-03-14 06:38:18] -rw-r--r--. 1 boinc boinc      8192 Mar 14 06:38 boinc_mmap_file
[2026-03-14 06:38:18] -rw-r--r--. 1 boinc boinc        28 Mar 14 06:38 wrapper_checkpoint.txt
[2026-03-14 06:38:18] -rw-------. 1 boinc boinc      6361 Mar 14 06:38 pilotlog.txt
[2026-03-14 06:38:18] -rw-------. 1 boinc boinc   1435652 Mar 14 06:38 log.48967085._021410.job.log.1
[2026-03-14 06:38:18] -rw-------. 1 boinc boinc       357 Mar 14 06:38 output.list
[2026-03-14 06:38:18] -rw-r--r--. 1 boinc boinc       620 Mar 14 06:38 runtime_log
[2026-03-14 06:38:18] -rw-------. 1 boinc boinc   1853440 Mar 14 06:38 result.tar.gz
[2026-03-14 06:38:18] -rw-r--r--. 1 boinc boinc      8816 Mar 14 06:38 runtime_log.err
[2026-03-14 06:38:18] -rw-------. 1 boinc boinc       654 Mar 14 06:38 nQJMDmH6LL9n9Rq4apOajLDm4fhM0noT9bVooX4SDm8onLDmUAUVNo.diag
[2026-03-14 06:38:18] -rw-r--r--. 1 boinc boinc     21079 Mar 14 06:38 stderr.txt
[2026-03-14 06:38:18] HITS file was successfully produced:
[2026-03-14 06:38:18] -rw-------. 1 boinc boinc 197241787 Mar 14 06:36 shared/HITS.pool.root.1
[2026-03-14 06:38:18]  *** Contents of shared directory: ***
[2026-03-14 06:38:18] total 403784
[2026-03-14 06:38:18] -rw-r--r--. 2 boinc boinc 213758537 Mar 14 03:49 ATLAS.root_0
[2026-03-14 06:38:18] -rw-r--r--. 2 boinc boinc    597528 Mar 14 03:49 input.tar.gz
[2026-03-14 06:38:18] -rw-r--r--. 2 boinc boinc     15845 Mar 14 03:49 start_atlas.sh
[2026-03-14 06:38:18] -rw-------. 1 boinc boinc 197241787 Mar 14 06:36 HITS.pool.root.1
[2026-03-14 06:38:18] -rw-------. 1 boinc boinc   1853440 Mar 14 06:38 result.tar.gz
06:38:20 (3530): run_atlas exited; CPU time 65934.976369
06:38:20 (3530): called boinc_finish(0)

</stderr_txt>
]]>

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