Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:10:55 (742275): wrapper (7.7.26015): starting
15:10:55 (742275): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 15:10:55] Arguments: --nthreads 8
[2026-03-13 15:10:55] Threads: 8
[2026-03-13 15:10:55] Checking for CVMFS
[2026-03-13 15:10:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 15:10:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 15:10:57] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 15:10:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 15:10:59] 2.11.3.0 1348857 147956 242724 157254 2 355 30655396 45568001 17356 130560 0 875129595 99.822 453030938 19192 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-03-13 15:10:59] CVMFS is ok
[2026-03-13 15:10:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 15:10:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 15:10:59] Further information can be found at the LHC@home message board.
[2026-03-13 15:10:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 15:10:59] Checking for apptainer binary...
[2026-03-13 15:10:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 15:10:59] Running /usr/bin/apptainer --version
[2026-03-13 15:10:59] apptainer version 1.4.1-1.el9
[2026-03-13 15:10:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 15:11:00] wns0004.triumf.lcg
[2026-03-13 15:11:00] apptainer works
[2026-03-13 15:11:00] Set ATHENA_PROC_NUMBER=8
[2026-03-13 15:11:00] Set ATHENA_CORE_NUMBER=8
[2026-03-13 15:11:00] Starting ATLAS job with PandaID=7044816581
[2026-03-13 15:11:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 15:18:31]  *** The last 200 lines of the pilot log: ***
[2026-03-13 15:18:32] 2026-03-13 22:17:55,098 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 15:18:32] 2026-03-13 22:17:55,099 | WARNING  | wrong length of table data, x=[1773440081.0, 1773440142.0], y=[1724.0, 271887.0] (must be same and length>=4)
[2026-03-13 15:18:32] 2026-03-13 22:17:55,099 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-03-13 15:18:32] 2026-03-13 22:17:55,099 | INFO     | ..............................
[2026-03-13 15:18:32] 2026-03-13 22:17:55,099 | INFO     | . Timing measurements:
[2026-03-13 15:18:32] 2026-03-13 22:17:55,099 | INFO     | . get job = 1 s
[2026-03-13 15:18:32] 2026-03-13 22:17:55,099 | INFO     | . initial setup = 71 s
[2026-03-13 15:18:32] 2026-03-13 22:17:55,100 | INFO     | . payload setup = 36 s
[2026-03-13 15:18:32] 2026-03-13 22:17:55,100 | INFO     | . stage-in = 0 s
[2026-03-13 15:18:32] 2026-03-13 22:17:55,100 | INFO     | . payload execution = 119 s
[2026-03-13 15:18:32] 2026-03-13 22:17:55,100 | INFO     | . stage-out = 2 s
[2026-03-13 15:18:32] 2026-03-13 22:17:55,100 | INFO     | . log creation = 0 s
[2026-03-13 15:18:32] 2026-03-13 22:17:55,100 | INFO     | ..............................
[2026-03-13 15:18:32] 2026-03-13 22:17:55,100 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-13 15:18:32] 2026-03-13 22:17:55,100 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7044816581/pilotlog.txt
[2026-03-13 15:18:32] 2026-03-13 22:17:55,245 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-13 15:18:32] - Log from pilotlog.txt -
[2026-03-13 15:18:32] 2026-03-13 22:17:55,068 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7044816581/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 15:18:32] 2026-03-13 22:17:55,069 | INFO     | extracted standard info from prmon json
[2026-03-13 15:18:32] 2026-03-13 22:17:55,069 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 15:18:32] 2026-03-13 22:17:55,069 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 15:18:32] 2026-03-13 22:17:55,098 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 15:18:32] 2026-03-13 22:17:55,098 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 15:18:32] 2026-03-13 22:17:55,099 | WARNING  | wrong length of table data, x=[1773440081.0, 1773440142.0], y=[1724.0, 271887.0] (must be same and length>=4)
[2026-03-13 15:18:32] 2026-03-13 22:17:55,099 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-03-13 15:18:32] 2026-03-13 22:17:55,099 | INFO     | ..............................
[2026-03-13 15:18:32] 2026-03-13 22:17:55,099 | INFO     | . Timing measurements:
[2026-03-13 15:18:32] 2026-03-13 22:17:55,099 | INFO     | . get job = 1 s
[2026-03-13 15:18:32] 2026-03-13 22:17:55,099 | INFO     | . initial setup = 71 s
[2026-03-13 15:18:32] 2026-03-13 22:17:55,100 | INFO     | . payload setup = 36 s
[2026-03-13 15:18:32] 2026-03-13 22:17:55,100 | INFO     | . stage-in = 0 s
[2026-03-13 15:18:32] 2026-03-13 22:17:55,100 | INFO     | . payload execution = 119 s
[2026-03-13 15:18:32] 2026-03-13 22:17:55,100 | INFO     | . stage-out = 2 s
[2026-03-13 15:18:32] 2026-03-13 22:17:55,100 | INFO     | . log creation = 0 s
[2026-03-13 15:18:32] 2026-03-13 22:17:55,100 | INFO     | ..............................
[2026-03-13 15:18:32] 2026-03-13 22:17:55,100 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-13 15:18:32] 2026-03-13 22:17:55,100 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7044816581/pilotlog.txt
[2026-03-13 15:18:32] 2026-03-13 22:17:55,245 | WARNING  | 
[2026-03-13 15:18:32] [begin log extracts]
[2026-03-13 15:18:32] - Log from pilotlog.txt -
[2026-03-13 15:18:32] 2026-03-13 22:17:55,068 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7044816581/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 15:18:32] 2026-03-13 22:17:55,069 | INFO     | extracted standard info from prmon json
[2026-03-13 15:18:32] 2026-03-13 22:17:55,069 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 15:18:32] 2026-03-13 22:17:55,069 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 15:18:32] 2026-03-13 22:17:55,098 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 15:18:32] 2026-03-13 22:17:55,098 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 15:18:32] 2026-03-13 22:17:55,099 | WARNING  | wrong length of table data, x=[1773440081.0, 1773440142.0], y=[1724.0, 271887.0] (must be same and length>=4)
[2026-03-13 15:18:32] 2026-03-13 22:17:55,099 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-03-13 15:18:32] 2026-03-13 22:17:55,099 | INFO     | ..............................
[2026-03-13 15:18:32] 2026-03-13 22:17:55,099 | INFO     | . Timing measurements:
[2026-03-13 15:18:32] 2026-03-13 22:17:55,099 | INFO     | . get job = 1 s
[2026-03-13 15:18:32] 2026-03-13 22:17:55,099 | INFO     | . initial setup = 71 s
[2026-03-13 15:18:32] 2026-03-13 22:17:55,100 | INFO     | . payload setup = 36 s
[2026-03-13 15:18:32] 2026-03-13 22:17:55,100 | INFO     | . stage-in = 0 s
[2026-03-13 15:18:32] 2026-03-13 22:17:55,100 | INFO     | . payload execution = 119 s
[2026-03-13 15:18:32] 2026-03-13 22:17:55,100 | INFO     | . stage-out = 2 s
[2026-03-13 15:18:32] 2026-03-13 22:17:55,100 | INFO     | . log creation = 0 s
[2026-03-13 15:18:32] 2026-03-13 22:17:55,100 | INFO     | ..............................
[2026-03-13 15:18:32] 2026-03-13 22:17:55,100 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-13 15:18:32] 2026-03-13 22:17:55,100 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7044816581/pilotlog.txt
[2026-03-13 15:18:32] [end log extracts]
[2026-03-13 15:18:32] 2026-03-13 22:17:55,246 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-13 15:18:32] 2026-03-13 22:17:55,246 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-13 15:18:32] 2026-03-13 22:17:55,943 | INFO     | 
[2026-03-13 15:18:32] 2026-03-13 22:17:55,943 | INFO     | job summary report
[2026-03-13 15:18:32] 2026-03-13 22:17:55,943 | INFO     | --------------------------------------------------
[2026-03-13 15:18:32] 2026-03-13 22:17:55,943 | INFO     | PanDA job id: 7044816581
[2026-03-13 15:18:32] 2026-03-13 22:17:55,943 | INFO     | task id: 48955010
[2026-03-13 15:18:32] 2026-03-13 22:17:55,943 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-13 15:15:42,793 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-13 15:18:32] 2026-03-13 22:17:55,943 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 15:18:32] 2026-03-13 22:17:55,943 | INFO     | pilot state: failed 
[2026-03-13 15:18:32] 2026-03-13 22:17:55,943 | INFO     | transexitcode: 65
[2026-03-13 15:18:32] 2026-03-13 22:17:55,943 | INFO     | exeerrorcode: 65
[2026-03-13 15:18:32] 2026-03-13 22:17:55,943 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-13 15:18:32] 2026-03-13 22:17:55,944 | INFO     | exitcode: 65
[2026-03-13 15:18:32] 2026-03-13 22:17:55,944 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-13 15:18:32] 2026-03-13 22:17:55,944 | INFO     | cpuconsumptiontime: 15 s
[2026-03-13 15:18:32] 2026-03-13 22:17:55,944 | INFO     | nevents: 0
[2026-03-13 15:18:32] 2026-03-13 22:17:55,944 | INFO     | neventsw: 0
[2026-03-13 15:18:32] 2026-03-13 22:17:55,944 | INFO     | pid: 750878
[2026-03-13 15:18:32] 2026-03-13 22:17:55,944 | INFO     | pgrp: 750878
[2026-03-13 15:18:32] 2026-03-13 22:17:55,944 | INFO     | corecount: 8
[2026-03-13 15:18:32] 2026-03-13 22:17:55,944 | INFO     | event service: False
[2026-03-13 15:18:32] 2026-03-13 22:17:55,944 | INFO     | sizes: {0: 2279089, 1: 2279771, 2: 2279799, 3: 2280232, 4: 2280260, 160: 2303682, 163: 2307974, 166: 2308002, 284: 2308168}
[2026-03-13 15:18:32] 2026-03-13 22:17:55,944 | INFO     | --------------------------------------------------
[2026-03-13 15:18:32] 2026-03-13 22:17:55,944 | INFO     | 
[2026-03-13 15:18:32] 2026-03-13 22:17:55,944 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-13 15:18:32] 2026-03-13 22:17:56,368 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 15:18:32] 2026-03-13 22:17:56,368 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 15:18:32] 2026-03-13 22:17:56,369 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 15:18:32] 2026-03-13 22:17:56,369 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 15:18:32] 2026-03-13 22:17:56,369 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 15:18:32] 2026-03-13 22:17:56,369 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 15:18:32] 2026-03-13 22:17:56,369 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 15:18:32] 2026-03-13 22:17:56,369 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 15:18:32] 2026-03-13 22:17:56,369 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 15:18:32] 2026-03-13 22:17:56,369 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 15:18:32] 2026-03-13 22:17:56,369 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 15:18:32] 2026-03-13 22:17:56,369 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 15:18:32] 2026-03-13 22:17:56,369 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 15:18:32] 2026-03-13 22:17:56,369 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 15:18:32] 2026-03-13 22:17:56,369 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 15:18:32] 2026-03-13 22:17:56,369 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 15:18:32] 2026-03-13 22:17:56,370 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 15:18:32] 2026-03-13 22:17:56,370 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 15:18:32] 2026-03-13 22:17:56,370 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 15:18:32] 2026-03-13 22:17:56,370 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 15:18:32] 2026-03-13 22:17:56,370 | INFO     | job 7044816581 has completed (purged errors)
[2026-03-13 15:18:32] 2026-03-13 22:17:56,370 | INFO     | overall cleanup function is called
[2026-03-13 15:18:32] 2026-03-13 22:17:57,200 | INFO     | PID=746037 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-13 15:18:32] 2026-03-13 22:17:57,200 | INFO     | .. there are 26 such processes running
[2026-03-13 15:18:32] 2026-03-13 22:17:57,422 | INFO     | --- collectZombieJob: --- 10, [750878]
[2026-03-13 15:18:32] 2026-03-13 22:17:57,422 | INFO     | zombie collector waiting for pid 750878
[2026-03-13 15:18:32] 2026-03-13 22:17:57,422 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 15:18:32] 2026-03-13 22:17:57,422 | INFO     | collected zombie processes
[2026-03-13 15:18:32] 2026-03-13 22:17:57,422 | INFO     | will attempt to kill all subprocesses of pid=750878
[2026-03-13 15:18:32] 2026-03-13 22:17:58,170 | INFO     | process IDs to be killed: [750878] (in reverse order)
[2026-03-13 15:18:32] 2026-03-13 22:17:58,653 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 15:18:32] 2026-03-13 22:17:58,654 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 15:18:32] 2026-03-13 22:17:58,684 | INFO     | did not find any defunct processes belonging to 750878
[2026-03-13 15:18:32] 2026-03-13 22:17:58,713 | INFO     | did not find any defunct processes belonging to 750878
[2026-03-13 15:18:32] 2026-03-13 22:17:58,714 | INFO     | ready for new job
[2026-03-13 15:18:32] 2026-03-13 22:17:58,714 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 15:18:32] 2026-03-13 22:17:58,735 | INFO     | **************************************
[2026-03-13 15:18:32] 2026-03-13 22:17:58,735 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 15:18:32] 2026-03-13 22:17:58,736 | INFO     | **************************************
[2026-03-13 15:18:32] 2026-03-13 22:17:58,736 | INFO     | 
[2026-03-13 15:18:32] 2026-03-13 22:17:58,737 | INFO     | architecture information:
[2026-03-13 15:18:32] 2026-03-13 22:17:58,737 | INFO     | executing command: cat /etc/os-release
[2026-03-13 15:18:32] 2026-03-13 22:17:58,815 | INFO     | cat /etc/os-release:
[2026-03-13 15:18:32] NAME="CentOS Linux"
[2026-03-13 15:18:32] VERSION="7 (Core)"
[2026-03-13 15:18:32] ID="centos"
[2026-03-13 15:18:32] ID_LIKE="rhel fedora"
[2026-03-13 15:18:32] VERSION_ID="7"
[2026-03-13 15:18:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 15:18:32] ANSI_COLOR="0;31"
[2026-03-13 15:18:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 15:18:32] HOME_URL="https://www.centos.org/"
[2026-03-13 15:18:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 15:18:32] 
[2026-03-13 15:18:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 15:18:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 15:18:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 15:18:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 15:18:32] 
[2026-03-13 15:18:32] 2026-03-13 22:17:58,815 | INFO     | **************************************
[2026-03-13 15:18:32] 2026-03-13 22:17:59,319 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-13 15:18:32] 2026-03-13 22:17:59,372 | INFO     | sufficient remaining disk space (1409754857472 B)
[2026-03-13 15:18:32] 2026-03-13 22:17:59,373 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 15:18:32] 2026-03-13 22:17:59,373 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 15:18:32] 2026-03-13 22:17:59,373 | INFO     | update_server=False
[2026-03-13 15:18:32] 2026-03-13 22:17:59,373 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 15:18:32] 2026-03-13 22:17:59,374 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 15:18:32] 2026-03-13 22:17:59,378 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 15:18:32] 2026-03-13 22:17:59,378 | INFO     | aborting loop
[2026-03-13 15:18:32] 2026-03-13 22:17:59,508 | INFO     | all data control threads have been joined
[2026-03-13 15:18:32] 2026-03-13 22:18:00,131 | INFO     | all job control threads have been joined
[2026-03-13 15:18:32] 2026-03-13 22:18:00,380 | INFO     | [job] retrieve thread has finished
[2026-03-13 15:18:32] 2026-03-13 22:18:00,384 | INFO     | [job] job monitor thread has finished
[2026-03-13 15:18:32] 2026-03-13 22:18:00,427 | INFO     | [data] copytool_in thread has finished
[2026-03-13 15:18:32] 2026-03-13 22:18:00,514 | INFO     | [data] control thread has finished
[2026-03-13 15:18:32] 2026-03-13 22:18:00,645 | INFO     | all payload control threads have been joined
[2026-03-13 15:18:32] 2026-03-13 22:18:00,932 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 15:18:32] 2026-03-13 22:18:00,942 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 15:18:32] 2026-03-13 22:18:01,137 | INFO     | [job] control thread has finished
[2026-03-13 15:18:32] 2026-03-13 22:18:01,381 | INFO     | [data] copytool_out thread has finished
[2026-03-13 15:18:32] 2026-03-13 22:18:01,561 | INFO     | [payload] validate_post thread has finished
[2026-03-13 15:18:32] 2026-03-13 22:18:01,630 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 15:18:32] 2026-03-13 22:18:01,651 | INFO     | [payload] control thread has finished
[2026-03-13 15:18:32] 2026-03-13 22:18:01,678 | INFO     | [payload] failed_post thread has finished
[2026-03-13 15:18:32] 2026-03-13 22:18:01,762 | INFO     | [job] validate thread has finished
[2026-03-13 15:18:32] 2026-03-13 22:18:01,845 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 15:18:32] 2026-03-13 22:18:01,845 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 15:18:32] 2026-03-13 22:18:01,849 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 15:18:32] 2026-03-13 22:18:01,958 | INFO     | [job] queue monitor thread has finished
[2026-03-13 15:18:32] 2026-03-13 22:18:05,665 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 15:18:32] 2026-03-13 22:18:05,768 | INFO     | [monitor] cgroup control has ended
[2026-03-13 15:18:32] 2026-03-13 22:18:07,031 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139727035877184)>', '<ExcThread(monitor, started 139726715590400)>']
[2026-03-13 15:18:32] 2026-03-13 22:18:12,060 | INFO     | all workflow threads have been joined
[2026-03-13 15:18:32] 2026-03-13 22:18:12,060 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 15:18:32] 2026-03-13 22:18:12,060 | INFO     | traces error code: 0
[2026-03-13 15:18:32] 2026-03-13 22:18:12,061 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 15:18:32] 2026-03-13 22:18:30,109 | INFO     | PID=746037 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-13 15:18:32] 2026-03-13 22:18:30,110 | INFO     | .. there are 26 such processes running
[2026-03-13 15:18:32] 2026-03-13 22:18:30,116 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 15:18:32] 2026-03-13 22:18:30,116 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 15:18:32] 2026-03-13 22:18:30,116 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 15:18:32] 2026-03-13 22:18:30,116 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 15:18:32] 2026-03-13 22:18:30,116 | INFO     | [monitor] control thread has ended
[2026-03-13 15:18:32] 2026-03-13 22:18:30,746 [wrapper] ==== pilot stdout END ====
[2026-03-13 15:18:32] 2026-03-13 22:18:30,786 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 15:18:32] 2026-03-13 22:18:30,832 [wrapper] pilotpid: 746037
[2026-03-13 15:18:32] 2026-03-13 22:18:30,892 [wrapper] Pilot exit status: 0
[2026-03-13 15:18:32] 2026-03-13 22:18:31,027 [wrapper] pandaids: 7044816581
[2026-03-13 15:18:32] 2026-03-13 22:18:31,212 [wrapper] cleanup supervisor_pilot  746043 746038
[2026-03-13 15:18:32] 2026-03-13 22:18:31,258 [wrapper] Test setup, not cleaning
[2026-03-13 15:18:32] 2026-03-13 22:18:31,289 [wrapper] apfmon messages muted
[2026-03-13 15:18:32] 2026-03-13 22:18:31,306 [wrapper] ==== wrapper stdout END ====
[2026-03-13 15:18:32] 2026-03-13 22:18:31,342 [wrapper] ==== wrapper stderr END ====
[2026-03-13 15:18:32]  *** Error codes and diagnostics ***
[2026-03-13 15:18:32]     "exeErrorCode": 65,
[2026-03-13 15:18:32]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-13 15:18:32]     "pilotErrorCode": 1305,
[2026-03-13 15:18:32]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-13 15:18:32]  *** Listing of results directory ***
[2026-03-13 15:18:32] total 438568
[2026-03-13 15:18:32] -rwx------. 1 boinc boinc     36322 Mar 13 11:05 runpilot2-wrapper.sh
[2026-03-13 15:18:32] -rw-r--r--. 1 boinc boinc    585013 Mar 13 11:06 pilot3.tar.gz
[2026-03-13 15:18:32] -rw-r--r--. 1 boinc boinc      5111 Mar 13 11:06 queuedata.json
[2026-03-13 15:18:32] -rw-r--r--. 1 boinc boinc       100 Mar 13 15:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 15:18:32] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 15:10 run_atlas
[2026-03-13 15:18:32] -rw-r--r--. 1 boinc boinc       105 Mar 13 15:10 job.xml
[2026-03-13 15:18:32] -rw-r--r--. 1 boinc boinc      6443 Mar 13 15:10 init_data.xml
[2026-03-13 15:18:32] -rw-r--r--. 2 boinc boinc 444931351 Mar 13 15:10 EVNT.46701403._001654.pool.root.1
[2026-03-13 15:18:32] -rw-r--r--. 2 boinc boinc     15845 Mar 13 15:10 start_atlas.sh
[2026-03-13 15:18:32] drwxrwx--x. 2 boinc boinc      4096 Mar 13 15:10 shared
[2026-03-13 15:18:32] -rw-r--r--. 2 boinc boinc    597533 Mar 13 15:10 input.tar.gz
[2026-03-13 15:18:32] -rw-r--r--. 1 boinc boinc         0 Mar 13 15:10 boinc_lockfile
[2026-03-13 15:18:32] -rw-r--r--. 1 boinc boinc      2563 Mar 13 15:11 pandaJob.out
[2026-03-13 15:18:32] -rw-------. 1 boinc boinc   1511579 Mar 13 15:11 agis_ddmendpoints.agis.ALL.json
[2026-03-13 15:18:32] -rw-------. 1 boinc boinc       442 Mar 13 15:13 workernode_map.json
[2026-03-13 15:18:32] -rw-------. 1 boinc boinc   1006721 Mar 13 15:13 agis_schedconf.cvmfs.json
[2026-03-13 15:18:32] drwx------. 5 boinc boinc      4096 Mar 13 15:13 pilot3
[2026-03-13 15:18:32] -rw-r--r--. 1 boinc boinc       525 Mar 13 15:15 boinc_task_state.xml
[2026-03-13 15:18:32] -rw-------. 1 boinc boinc       982 Mar 13 15:15 memory_monitor_summary.json
[2026-03-13 15:18:32] -rw-------. 1 boinc boinc     22985 Mar 13 15:15 log.48955010._032979.job.log.tgz.1
[2026-03-13 15:18:32] -rw-------. 1 boinc boinc      7037 Mar 13 15:17 heartbeat.json
[2026-03-13 15:18:32] -rw-r--r--. 1 boinc boinc        23 Mar 13 15:18 wrapper_checkpoint.txt
[2026-03-13 15:18:32] -rw-r--r--. 1 boinc boinc      8192 Mar 13 15:18 boinc_mmap_file
[2026-03-13 15:18:32] -rw-------. 1 boinc boinc        95 Mar 13 15:18 pilot_heartbeat.json
[2026-03-13 15:18:32] -rw-------. 1 boinc boinc       822 Mar 13 15:18 pilotlog.txt
[2026-03-13 15:18:32] -rw-------. 1 boinc boinc     95844 Mar 13 15:18 log.48955010._032979.job.log.1
[2026-03-13 15:18:32] -rw-------. 1 boinc boinc       188 Mar 13 15:18 output.list
[2026-03-13 15:18:32] -rw-r--r--. 1 boinc boinc       620 Mar 13 15:18 runtime_log
[2026-03-13 15:18:32] -rw-------. 1 boinc boinc    133120 Mar 13 15:18 result.tar.gz
[2026-03-13 15:18:32] -rw-------. 1 boinc boinc       645 Mar 13 15:18 x4jNDmI4LL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmmlnLDmOBdyNm.diag
[2026-03-13 15:18:32] -rw-r--r--. 1 boinc boinc      8633 Mar 13 15:18 runtime_log.err
[2026-03-13 15:18:32] -rw-r--r--. 1 boinc boinc     21984 Mar 13 15:18 stderr.txt
[2026-03-13 15:18:32] No HITS result produced
[2026-03-13 15:18:32]  *** Contents of shared directory: ***
[2026-03-13 15:18:32] total 435240
[2026-03-13 15:18:32] -rw-r--r--. 2 boinc boinc 444931351 Mar 13 15:10 ATLAS.root_0
[2026-03-13 15:18:32] -rw-r--r--. 2 boinc boinc     15845 Mar 13 15:10 start_atlas.sh
[2026-03-13 15:18:32] -rw-r--r--. 2 boinc boinc    597533 Mar 13 15:10 input.tar.gz
[2026-03-13 15:18:32] -rw-------. 1 boinc boinc    133120 Mar 13 15:18 result.tar.gz
15:18:33 (742275): run_atlas exited; CPU time 27.062188
15:18:33 (742275): called boinc_finish(0)

</stderr_txt>
]]>

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