Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:20:50 (650613): wrapper (7.7.26015): starting
21:20:50 (650613): wrapper: running run_atlas (--nthreads 4)
[2026-03-16 21:20:50] Arguments: --nthreads 4
[2026-03-16 21:20:50] Threads: 4
[2026-03-16 21:20:50] Checking for CVMFS
[2026-03-16 21:20:50] No cvmfs_config command found, will try listing directly
[2026-03-16 21:20:50] CVMFS is ok
[2026-03-16 21:20:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 21:20:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 21:20:50] Further information can be found at the LHC@home message board.
[2026-03-16 21:20:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 21:20:50] Checking for apptainer binary...
[2026-03-16 21:20:50] which: no apptainer in ((null))
[2026-03-16 21:20:50] apptainer is not installed, using version from CVMFS
[2026-03-16 21:20:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 21:20:50] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot36/slots/12/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2026-03-16 21:20:50] apptainer works
[2026-03-16 21:20:50] Set ATHENA_PROC_NUMBER=4
[2026-03-16 21:20:50] Set ATHENA_CORE_NUMBER=4
[2026-03-16 21:20:50] Starting ATLAS job with PandaID=7044617527
[2026-03-16 21:20:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot36/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
23:10:45 (895816): wrapper (7.7.26015): starting
23:10:45 (895816): wrapper: running run_atlas (--nthreads 4)
[2026-03-16 23:10:45] Arguments: --nthreads 4
[2026-03-16 23:10:45] Threads: 4
[2026-03-16 23:10:45] This job has been restarted, cleaning up previous attempt
[2026-03-16 23:10:45] Checking for CVMFS
[2026-03-16 23:10:45] No cvmfs_config command found, will try listing directly
[2026-03-16 23:10:45] CVMFS is ok
[2026-03-16 23:10:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 23:10:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 23:10:45] Further information can be found at the LHC@home message board.
[2026-03-16 23:10:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 23:10:45] Checking for apptainer binary...
[2026-03-16 23:10:45] which: no apptainer in ((null))
[2026-03-16 23:10:45] apptainer is not installed, using version from CVMFS
[2026-03-16 23:10:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 23:10:45] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot36/slots/12/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2026-03-16 23:10:45] apptainer works
[2026-03-16 23:10:45] Set ATHENA_PROC_NUMBER=4
[2026-03-16 23:10:45] Set ATHENA_CORE_NUMBER=4
[2026-03-16 23:10:45] Starting ATLAS job with PandaID=7044617527
[2026-03-16 23:10:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot36/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-17 02:37:48]  *** The last 200 lines of the pilot log: ***
[2026-03-17 02:37:48] 2026-03-17 01:37:14,564 | INFO     | total number of processed events: 400 (read)
[2026-03-17 02:37:48] 2026-03-17 01:37:14,602 | INFO     | using path: /var/lib/boinc/var/slot36/slots/12/PanDA_Pilot-7044617527/memory_monitor_summary.json (trf name=prmon)
[2026-03-17 02:37:48] 2026-03-17 01:37:14,603 | INFO     | extracted standard info from prmon json
[2026-03-17 02:37:48] 2026-03-17 01:37:14,604 | INFO     | extracted standard memory fields from prmon json
[2026-03-17 02:37:48] 2026-03-17 01:37:14,604 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-17 02:37:48] 2026-03-17 01:37:14,604 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-17 02:37:48] 2026-03-17 01:37:14,604 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-17 02:37:48] 2026-03-17 01:37:14,609 | INFO     | fitting pss+swap vs Time
[2026-03-17 02:37:48] 2026-03-17 01:37:14,610 | INFO     | sum of square deviations: 2593916542.0
[2026-03-17 02:37:48] 2026-03-17 01:37:14,612 | INFO     | sum of deviations: 26553183978.000004
[2026-03-17 02:37:48] 2026-03-17 01:37:14,612 | INFO     | mean x: 1773705250.0
[2026-03-17 02:37:48] 2026-03-17 01:37:14,612 | INFO     | mean y: 2310186.7438423648
[2026-03-17 02:37:48] 2026-03-17 01:37:14,612 | INFO     | intersect: -18154604680.56359
[2026-03-17 02:37:48] 2026-03-17 01:37:14,613 | INFO     | chi2: 2.3925714385661654
[2026-03-17 02:37:48] 2026-03-17 01:37:14,613 | INFO     | sum of square deviations: 2406926989.5
[2026-03-17 02:37:48] 2026-03-17 01:37:14,615 | INFO     | sum of deviations: 38668082054.499985
[2026-03-17 02:37:48] 2026-03-17 01:37:14,615 | INFO     | mean x: 1773705097.5
[2026-03-17 02:37:48] 2026-03-17 01:37:14,615 | INFO     | mean y: 2319855.3484848486
[2026-03-17 02:37:48] 2026-03-17 01:37:14,615 | INFO     | intersect: -28492842046.036182
[2026-03-17 02:37:48] 2026-03-17 01:37:14,615 | INFO     | chi2: 1.5698599701253235
[2026-03-17 02:37:48] 2026-03-17 01:37:14,616 | INFO     | current chi2=1.5698599701253235 (change=34.38607747210597 %)
[2026-03-17 02:37:48] 2026-03-17 01:37:14,616 | INFO     | sum of square deviations: 2229146912.0
[2026-03-17 02:37:48] 2026-03-17 01:37:14,617 | INFO     | sum of deviations: 37537543038.0
[2026-03-17 02:37:48] 2026-03-17 01:37:14,618 | INFO     | mean x: 1773704945.0
[2026-03-17 02:37:48] 2026-03-17 01:37:14,618 | INFO     | mean y: 2318885.5077720205
[2026-03-17 02:37:48] 2026-03-17 01:37:14,618 | INFO     | intersect: -29865845187.139465
[2026-03-17 02:37:48] 2026-03-17 01:37:14,618 | INFO     | chi2: 1.5702493998295795
[2026-03-17 02:37:48] 2026-03-17 01:37:14,619 | INFO     | current chi2=1.5702493998295795 (change=-0.024806652291722523 %)
[2026-03-17 02:37:48] 2026-03-17 01:37:14,619 | INFO     | right removable region: 192
[2026-03-17 02:37:48] 2026-03-17 01:37:14,619 | INFO     | sum of square deviations: 2406926989.5
[2026-03-17 02:37:48] 2026-03-17 01:37:14,621 | INFO     | sum of deviations: -4958202182.999997
[2026-03-17 02:37:48] 2026-03-17 01:37:14,621 | INFO     | mean x: 1773705402.5
[2026-03-17 02:37:48] 2026-03-17 01:37:14,621 | INFO     | mean y: 2335632.0707070706
[2026-03-17 02:37:48] 2026-03-17 01:37:14,621 | INFO     | intersect: 3656119081.6888776
[2026-03-17 02:37:48] 2026-03-17 01:37:14,622 | INFO     | chi2: 0.8532394606936355
[2026-03-17 02:37:48] 2026-03-17 01:37:14,622 | INFO     | current chi2=0.8532394606936355 (change=64.3379734899381 %)
[2026-03-17 02:37:48] 2026-03-17 01:37:14,622 | INFO     | sum of square deviations: 2229146912.0
[2026-03-17 02:37:48] 2026-03-17 01:37:14,624 | INFO     | sum of deviations: -7232583888.999998
[2026-03-17 02:37:48] 2026-03-17 01:37:14,624 | INFO     | mean x: 1773705555.0
[2026-03-17 02:37:48] 2026-03-17 01:37:14,624 | INFO     | mean y: 2337566.8549222797
[2026-03-17 02:37:48] 2026-03-17 01:37:14,625 | INFO     | intersect: 5757218123.118053
[2026-03-17 02:37:48] 2026-03-17 01:37:14,625 | INFO     | chi2: 0.8461155794398544
[2026-03-17 02:37:48] 2026-03-17 01:37:14,625 | INFO     | current chi2=0.8461155794398544 (change=0.8349216816566183 %)
[2026-03-17 02:37:48] 2026-03-17 01:37:14,625 | INFO     | left removable region: 20
[2026-03-17 02:37:48] 2026-03-17 01:37:14,626 | INFO     | sum of square deviations: 1577789583.0
[2026-03-17 02:37:48] 2026-03-17 01:37:14,627 | INFO     | sum of deviations: 3027817838.0
[2026-03-17 02:37:48] 2026-03-17 01:37:14,627 | INFO     | mean x: 1773705524.5
[2026-03-17 02:37:48] 2026-03-17 01:37:14,627 | INFO     | mean y: 2350034.3720930233
[2026-03-17 02:37:48] 2026-03-17 01:37:14,627 | INFO     | intersect: -3401435416.0482917
[2026-03-17 02:37:48] 2026-03-17 01:37:14,628 | INFO     | chi2: 0.00044688895316565095
[2026-03-17 02:37:48] 2026-03-17 01:37:14,628 | INFO     | current memory leak: 1.92 B/s (using 172 data points, chi2=0.00)
[2026-03-17 02:37:48] 2026-03-17 01:37:14,629 | INFO     | could have reported an average CPU frequency of 1995 MHz (10 samples)
[2026-03-17 02:37:48] 2026-03-17 01:37:14,629 | INFO     | ..............................
[2026-03-17 02:37:48] 2026-03-17 01:37:14,629 | INFO     | . Timing measurements:
[2026-03-17 02:37:48] 2026-03-17 01:37:14,629 | INFO     | . get job = 0 s
[2026-03-17 02:37:48] 2026-03-17 01:37:14,630 | INFO     | . initial setup = 1 s
[2026-03-17 02:37:48] 2026-03-17 01:37:14,630 | INFO     | . payload setup = 12 s
[2026-03-17 02:37:48] 2026-03-17 01:37:14,630 | INFO     | . stage-in = 0 s
[2026-03-17 02:37:48] 2026-03-17 01:37:14,630 | INFO     | . payload execution = 12344 s
[2026-03-17 02:37:48] 2026-03-17 01:37:14,630 | INFO     | . stage-out = 1 s
[2026-03-17 02:37:48] 2026-03-17 01:37:14,630 | INFO     | . log creation = 0 s
[2026-03-17 02:37:48] 2026-03-17 01:37:14,630 | INFO     | ..............................
[2026-03-17 02:37:48] 2026-03-17 01:37:14,769 | INFO     | 
[2026-03-17 02:37:48] 2026-03-17 01:37:14,769 | INFO     | job summary report
[2026-03-17 02:37:48] 2026-03-17 01:37:14,770 | INFO     | --------------------------------------------------
[2026-03-17 02:37:48] 2026-03-17 01:37:14,770 | INFO     | PanDA job id: 7044617527
[2026-03-17 02:37:48] 2026-03-17 01:37:14,770 | INFO     | task id: 48955015
[2026-03-17 02:37:48] 2026-03-17 01:37:14,770 | INFO     | errors: (none)
[2026-03-17 02:37:48] 2026-03-17 01:37:14,770 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-17 02:37:48] 2026-03-17 01:37:14,770 | INFO     | pilot state: finished 
[2026-03-17 02:37:48] 2026-03-17 01:37:14,770 | INFO     | transexitcode: 0
[2026-03-17 02:37:48] 2026-03-17 01:37:14,770 | INFO     | exeerrorcode: 0
[2026-03-17 02:37:48] 2026-03-17 01:37:14,771 | INFO     | exeerrordiag: 
[2026-03-17 02:37:48] 2026-03-17 01:37:14,771 | INFO     | exitcode: 0
[2026-03-17 02:37:48] 2026-03-17 01:37:14,771 | INFO     | exitmsg: OK
[2026-03-17 02:37:48] 2026-03-17 01:37:14,771 | INFO     | cpuconsumptiontime: 45833 s
[2026-03-17 02:37:48] 2026-03-17 01:37:14,771 | INFO     | nevents: 400
[2026-03-17 02:37:48] 2026-03-17 01:37:14,771 | INFO     | neventsw: 0
[2026-03-17 02:37:48] 2026-03-17 01:37:14,771 | INFO     | pid: 903080
[2026-03-17 02:37:48] 2026-03-17 01:37:14,771 | INFO     | pgrp: 903080
[2026-03-17 02:37:48] 2026-03-17 01:37:14,772 | INFO     | corecount: 4
[2026-03-17 02:37:48] 2026-03-17 01:37:14,772 | INFO     | event service: False
[2026-03-17 02:37:48] 2026-03-17 01:37:14,772 | INFO     | sizes: {0: 2279759, 1: 2280276, 2: 2280276, 12360: 2310235, 12363: 2319257, 12366: 2319313, 12367: 2319635}
[2026-03-17 02:37:48] 2026-03-17 01:37:14,772 | INFO     | --------------------------------------------------
[2026-03-17 02:37:48] 2026-03-17 01:37:14,772 | INFO     | 
[2026-03-17 02:37:48] 2026-03-17 01:37:14,773 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot36/slots/12
[2026-03-17 02:37:48] 2026-03-17 01:37:14,810 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-17 02:37:48] 2026-03-17 01:37:14,811 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-17 02:37:48] 2026-03-17 01:37:14,811 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-17 02:37:48] 2026-03-17 01:37:14,811 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-17 02:37:48] 2026-03-17 01:37:14,811 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-17 02:37:48] 2026-03-17 01:37:14,811 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-17 02:37:48] 2026-03-17 01:37:14,812 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-17 02:37:48] 2026-03-17 01:37:14,812 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-17 02:37:48] 2026-03-17 01:37:14,812 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-17 02:37:48] 2026-03-17 01:37:14,812 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-17 02:37:48] 2026-03-17 01:37:14,812 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-17 02:37:48] 2026-03-17 01:37:14,813 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-17 02:37:48] 2026-03-17 01:37:14,813 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-17 02:37:48] 2026-03-17 01:37:14,813 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-17 02:37:48] 2026-03-17 01:37:14,813 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-17 02:37:48] 2026-03-17 01:37:14,813 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-17 02:37:48] 2026-03-17 01:37:14,813 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-17 02:37:48] 2026-03-17 01:37:14,813 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-17 02:37:48] 2026-03-17 01:37:14,814 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-17 02:37:48] 2026-03-17 01:37:14,814 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-17 02:37:48] 2026-03-17 01:37:14,814 | INFO     | job 7044617527 has completed (purged errors)
[2026-03-17 02:37:48] 2026-03-17 01:37:14,814 | INFO     | overall cleanup function is called
[2026-03-17 02:37:48] 2026-03-17 01:37:14,841 | INFO     | PID=900236 has CPU usage=21.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-17 02:37:48] 2026-03-17 01:37:14,841 | INFO     | .. there are 24 such processes running
[2026-03-17 02:37:48] 2026-03-17 01:37:15,826 | INFO     | --- collectZombieJob: --- 10, [903080]
[2026-03-17 02:37:48] 2026-03-17 01:37:15,826 | INFO     | zombie collector waiting for pid 903080
[2026-03-17 02:37:48] 2026-03-17 01:37:15,826 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-17 02:37:48] 2026-03-17 01:37:15,827 | INFO     | collected zombie processes
[2026-03-17 02:37:48] 2026-03-17 01:37:15,827 | INFO     | will attempt to kill all subprocesses of pid=903080
[2026-03-17 02:37:48] 2026-03-17 01:37:16,942 | INFO     | process IDs to be killed: [903080] (in reverse order)
[2026-03-17 02:37:48] 2026-03-17 01:37:17,384 | WARNING  | found no corresponding commands to process id(s)
[2026-03-17 02:37:48] 2026-03-17 01:37:17,384 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-17 02:37:48] 2026-03-17 01:37:17,424 | INFO     | did not find any defunct processes belonging to 903080
[2026-03-17 02:37:48] 2026-03-17 01:37:17,460 | INFO     | did not find any defunct processes belonging to 903080
[2026-03-17 02:37:48] 2026-03-17 01:37:17,461 | INFO     | ready for new job
[2026-03-17 02:37:48] 2026-03-17 01:37:17,461 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-17 02:37:48] 2026-03-17 01:37:17,464 | INFO     | **************************************
[2026-03-17 02:37:48] 2026-03-17 01:37:17,464 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-17 02:37:48] 2026-03-17 01:37:17,464 | INFO     | **************************************
[2026-03-17 02:37:48] 2026-03-17 01:37:17,464 | INFO     | 
[2026-03-17 02:37:48] 2026-03-17 01:37:17,476 | INFO     | architecture information:
[2026-03-17 02:37:48] 2026-03-17 01:37:17,476 | INFO     | executing command: cat /etc/os-release
[2026-03-17 02:37:48] 2026-03-17 01:37:17,506 | INFO     | cat /etc/os-release:
[2026-03-17 02:37:48] NAME="CentOS Linux"
[2026-03-17 02:37:48] VERSION="7 (Core)"
[2026-03-17 02:37:48] ID="centos"
[2026-03-17 02:37:48] ID_LIKE="rhel fedora"
[2026-03-17 02:37:48] VERSION_ID="7"
[2026-03-17 02:37:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-17 02:37:48] ANSI_COLOR="0;31"
[2026-03-17 02:37:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-17 02:37:48] HOME_URL="https://www.centos.org/"
[2026-03-17 02:37:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-17 02:37:48] 
[2026-03-17 02:37:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-17 02:37:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-17 02:37:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-17 02:37:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-17 02:37:48] 
[2026-03-17 02:37:48] 2026-03-17 01:37:17,507 | INFO     | **************************************
[2026-03-17 02:37:48] 2026-03-17 01:37:18,010 | INFO     | executing command: df -mP /var/lib/boinc/var/slot36/slots/12
[2026-03-17 02:37:48] 2026-03-17 01:37:18,043 | INFO     | sufficient remaining disk space (184314494976 B)
[2026-03-17 02:37:48] 2026-03-17 01:37:18,043 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-17 02:37:48] 2026-03-17 01:37:18,044 | INFO     | current server update state: UPDATING_FINAL
[2026-03-17 02:37:48] 2026-03-17 01:37:18,044 | INFO     | update_server=False
[2026-03-17 02:37:48] 2026-03-17 01:37:18,044 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-17 02:37:48] 2026-03-17 01:37:18,361 | INFO     | all payload control threads have been joined
[2026-03-17 02:37:48] 2026-03-17 01:37:18,570 | INFO     | all data control threads have been joined
[2026-03-17 02:37:48] 2026-03-17 01:37:18,653 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-17 02:37:48] 2026-03-17 01:37:18,847 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-17 02:37:48] 2026-03-17 01:37:18,848 | INFO     | aborting loop
[2026-03-17 02:37:48] 2026-03-17 01:37:19,049 | INFO     | [job] retrieve thread has finished
[2026-03-17 02:37:48] 2026-03-17 01:37:19,193 | INFO     | [job] validate thread has finished
[2026-03-17 02:37:48] 2026-03-17 01:37:19,293 | INFO     | [job] create_data_payload thread has finished
[2026-03-17 02:37:48] 2026-03-17 01:37:19,365 | INFO     | [payload] control thread has finished
[2026-03-17 02:37:48] 2026-03-17 01:37:19,516 | INFO     | [payload] execute_payloads thread has finished
[2026-03-17 02:37:48] 2026-03-17 01:37:19,575 | INFO     | [data] control thread has finished
[2026-03-17 02:37:48] 2026-03-17 01:37:19,639 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-17 02:37:48] 2026-03-17 01:37:19,705 | INFO     | all job control threads have been joined
[2026-03-17 02:37:48] 2026-03-17 01:37:19,772 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-17 02:37:48] 2026-03-17 01:37:19,833 | INFO     | [data] copytool_in thread has finished
[2026-03-17 02:37:48] 2026-03-17 01:37:19,852 | INFO     | [job] job monitor thread has finished
[2026-03-17 02:37:48] 2026-03-17 01:37:19,920 | INFO     | [payload] validate_pre thread has finished
[2026-03-17 02:37:48] 2026-03-17 01:37:20,286 | INFO     | [payload] failed_post thread has finished
[2026-03-17 02:37:48] 2026-03-17 01:37:20,437 | INFO     | [payload] validate_post thread has finished
[2026-03-17 02:37:48] 2026-03-17 01:37:20,659 | INFO     | [data] copytool_out thread has finished
[2026-03-17 02:37:48] 2026-03-17 01:37:20,710 | INFO     | [job] control thread has finished
[2026-03-17 02:37:48] 2026-03-17 01:37:20,777 | INFO     | [job] queue monitor thread has finished
[2026-03-17 02:37:48] 2026-03-17 01:37:23,646 | INFO     | [data] queue_monitor thread has finished
[2026-03-17 02:37:48] 2026-03-17 01:37:26,424 | INFO     | [monitor] cgroup control has ended
[2026-03-17 02:37:48] 2026-03-17 01:37:28,405 | INFO     | job.realtimelogging is not enabled
[2026-03-17 02:37:48] 2026-03-17 01:37:29,410 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-17 02:37:48] 2026-03-17 01:37:30,980 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22473329293120)>', '<ExcThread(monitor, started 22473086334720)>']
[2026-03-17 02:37:48] 2026-03-17 01:37:36,007 | INFO     | all workflow threads have been joined
[2026-03-17 02:37:48] 2026-03-17 01:37:36,007 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-17 02:37:48] 2026-03-17 01:37:36,008 | INFO     | traces error code: 0
[2026-03-17 02:37:48] 2026-03-17 01:37:36,008 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-17 02:37:48] 2026-03-17 01:37:48,092 | INFO     | PID=900236 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-17 02:37:48] 2026-03-17 01:37:48,093 | INFO     | .. there are 24 such processes running
[2026-03-17 02:37:48] 2026-03-17 01:37:48,094 | INFO     | found 0 job(s) in 20 queues
[2026-03-17 02:37:48] 2026-03-17 01:37:48,094 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-17 02:37:48] 2026-03-17 01:37:48,094 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-17 02:37:48] 2026-03-17 01:37:48,094 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-17 02:37:48] 2026-03-17 01:37:48,094 | INFO     | [monitor] control thread has ended
[2026-03-17 02:37:48] 2026-03-17 01:37:48,260 [wrapper] ==== pilot stdout END ====
[2026-03-17 02:37:48] 2026-03-17 01:37:48,265 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-17 02:37:48] 2026-03-17 01:37:48,275 [wrapper] pilotpid: 900236
[2026-03-17 02:37:48] 2026-03-17 01:37:48,280 [wrapper] Pilot exit status: 0
[2026-03-17 02:37:48] 2026-03-17 01:37:48,307 [wrapper] pandaids: 7044617527 7044617527
[2026-03-17 02:37:48] 2026-03-17 01:37:48,576 [wrapper] cleanup supervisor_pilot 1377250 900237
[2026-03-17 02:37:48] 2026-03-17 01:37:48,582 [wrapper] Test setup, not cleaning
[2026-03-17 02:37:48] 2026-03-17 01:37:48,587 [wrapper] apfmon messages muted
[2026-03-17 02:37:48] 2026-03-17 01:37:48,593 [wrapper] ==== wrapper stdout END ====
[2026-03-17 02:37:48] 2026-03-17 01:37:48,598 [wrapper] ==== wrapper stderr END ====
[2026-03-17 02:37:48]  *** Error codes and diagnostics ***
[2026-03-17 02:37:48]     "exeErrorCode": 0,
[2026-03-17 02:37:48]     "exeErrorDiag": "",
[2026-03-17 02:37:48]     "pilotErrorCode": 0,
[2026-03-17 02:37:48]     "pilotErrorDiag": "",
[2026-03-17 02:37:48]  *** Listing of results directory ***
[2026-03-17 02:37:48] total 1059784
[2026-03-17 02:37:48] drwx------. 5 boinc boinc      4096 Mar 10 17:00 pilot3
[2026-03-17 02:37:48] -rwx------. 1 boinc boinc     36322 Mar 13 18:10 runpilot2-wrapper.sh
[2026-03-17 02:37:48] -rw-r--r--. 1 boinc boinc      5111 Mar 13 18:12 queuedata.json
[2026-03-17 02:37:48] -rw-r--r--. 1 boinc boinc    585013 Mar 13 18:12 pilot3.tar.gz
[2026-03-17 02:37:48] -rw-r--r--. 1 boinc boinc       100 Mar 16 20:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-17 02:37:48] -rwxr-xr-x. 1 boinc boinc      7986 Mar 16 20:20 run_atlas
[2026-03-17 02:37:48] -rw-r--r--. 1 boinc boinc       105 Mar 16 20:20 job.xml
[2026-03-17 02:37:48] -rw-r--r--. 3 boinc boinc 445277287 Mar 16 21:20 EVNT.46701403._002419.pool.root.1
[2026-03-17 02:37:48] -rw-r--r--. 3 boinc boinc 445277287 Mar 16 21:20 ATLAS.root_0
[2026-03-17 02:37:48] -rw-r--r--. 2 boinc boinc     15845 Mar 16 21:20 start_atlas.sh
[2026-03-17 02:37:48] drwxrwx--x. 2 boinc boinc      4096 Mar 16 21:20 shared
[2026-03-17 02:37:48] -rw-r--r--. 2 boinc boinc    597535 Mar 16 21:20 input.tar.gz
[2026-03-17 02:37:48] -rw-r--r--. 1 boinc boinc         0 Mar 16 21:20 boinc_lockfile
[2026-03-17 02:37:48] -rw-r--r--. 1 boinc boinc      2571 Mar 16 23:10 pandaJob.out
[2026-03-17 02:37:48] -rw-------. 1 boinc boinc   1006429 Mar 16 23:11 agis_schedconf.cvmfs.json
[2026-03-17 02:37:48] -rw-------. 1 boinc boinc       443 Mar 16 23:11 workernode_map.json
[2026-03-17 02:37:48] -rw-r--r--. 1 boinc boinc      6701 Mar 17 02:20 init_data.xml
[2026-03-17 02:37:48] -rw-------. 1 boinc boinc 186700065 Mar 17 02:36 HITS.48955015._018164.pool.root.1
[2026-03-17 02:37:48] -rw-r--r--. 1 boinc boinc       531 Mar 17 02:36 boinc_task_state.xml
[2026-03-17 02:37:48] -rw-------. 1 boinc boinc      1027 Mar 17 02:37 memory_monitor_summary.json
[2026-03-17 02:37:48] -rw-------. 1 boinc boinc   1511579 Mar 17 02:37 agis_ddmendpoints.agis.ALL.json
[2026-03-17 02:37:48] -rw-------. 1 boinc boinc    365075 Mar 17 02:37 log.48955015._018164.job.log.tgz.1
[2026-03-17 02:37:48] -rw-------. 1 boinc boinc      6354 Mar 17 02:37 heartbeat.json
[2026-03-17 02:37:48] -rw-r--r--. 1 boinc boinc      8192 Mar 17 02:37 boinc_mmap_file
[2026-03-17 02:37:48] -rw-------. 1 boinc boinc        97 Mar 17 02:37 pilot_heartbeat.json
[2026-03-17 02:37:48] -rw-------. 1 boinc boinc       822 Mar 17 02:37 pilotlog.txt
[2026-03-17 02:37:48] -rw-r--r--. 1 boinc boinc        28 Mar 17 02:37 wrapper_checkpoint.txt
[2026-03-17 02:37:48] -rw-------. 1 boinc boinc   1643092 Mar 17 02:37 log.48955015._018164.job.log.1
[2026-03-17 02:37:48] -rw-------. 1 boinc boinc       357 Mar 17 02:37 output.list
[2026-03-17 02:37:48] -rw-r--r--. 1 boinc boinc       620 Mar 17 02:37 runtime_log
[2026-03-17 02:37:48] -rw-------. 1 boinc boinc   2027520 Mar 17 02:37 result.tar.gz
[2026-03-17 02:37:48] -rw-r--r--. 1 boinc boinc      9299 Mar 17 02:37 runtime_log.err
[2026-03-17 02:37:48] -rw-------. 1 boinc boinc       789 Mar 17 02:37 2UoMDmQDLL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmsFqLDmXRmVhm.diag
[2026-03-17 02:37:48] -rw-r--r--. 1 boinc boinc     22839 Mar 17 02:37 stderr.txt
[2026-03-17 02:37:48] HITS file was successfully produced:
[2026-03-17 02:37:48] -rw-------. 1 boinc boinc 186700065 Mar 17 02:36 shared/HITS.pool.root.1
[2026-03-17 02:37:48]  *** Contents of shared directory: ***
[2026-03-17 02:37:48] total 619760
[2026-03-17 02:37:48] -rw-r--r--. 3 boinc boinc 445277287 Mar 16 21:20 ATLAS.root_0
[2026-03-17 02:37:48] -rw-r--r--. 2 boinc boinc     15845 Mar 16 21:20 start_atlas.sh
[2026-03-17 02:37:48] -rw-r--r--. 2 boinc boinc    597535 Mar 16 21:20 input.tar.gz
[2026-03-17 02:37:48] -rw-------. 1 boinc boinc 186700065 Mar 17 02:36 HITS.pool.root.1
[2026-03-17 02:37:48] -rw-------. 1 boinc boinc   2027520 Mar 17 02:37 result.tar.gz
02:37:50 (895816): run_atlas exited; CPU time 46799.132677
02:37:50 (895816): called boinc_finish(0)

</stderr_txt>
]]>

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