Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:46:15 (3374331): wrapper (7.7.26015): starting
13:46:15 (3374331): wrapper: running run_atlas (--nthreads 12)
[2026-03-13 13:46:15] Arguments: --nthreads 12
[2026-03-13 13:46:15] Threads: 12
[2026-03-13 13:46:15] Checking for CVMFS
[2026-03-13 13:46:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 13:46:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 13:46:16] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 13:46:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 13:46:16] 2.11.5.0 2104101 182943 208164 157253 0 478 32543912 45568001 26924 130560 0 1761398785 99.818 994835022 22064 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-03-13 13:46:16] CVMFS is ok
[2026-03-13 13:46:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 13:46:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 13:46:17] Further information can be found at the LHC@home message board.
[2026-03-13 13:46:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 13:46:17] Checking for apptainer binary...
[2026-03-13 13:46:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 13:46:17] Running /usr/bin/apptainer --version
[2026-03-13 13:46:17] apptainer version 1.4.1-1.el9
[2026-03-13 13:46:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 13:46:17] wns0090.triumf.lcg
[2026-03-13 13:46:17] apptainer works
[2026-03-13 13:46:18] Set ATHENA_PROC_NUMBER=12
[2026-03-13 13:46:18] Set ATHENA_CORE_NUMBER=12
[2026-03-13 13:46:18] Starting ATLAS job with PandaID=7044619457
[2026-03-13 13:46:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 13:51:15]  *** The last 200 lines of the pilot log: ***
[2026-03-13 13:51:15] 2026-03-13 20:50:40,871 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 13:51:15] 2026-03-13 20:50:40,878 | WARNING  | wrong length of table data, x=[1773434881.0], y=[1167.0] (must be same and length>=4)
[2026-03-13 13:51:15] 2026-03-13 20:50:40,879 | INFO     | could have reported an average CPU frequency of 2715 MHz (4 samples)
[2026-03-13 13:51:15] 2026-03-13 20:50:40,879 | INFO     | ..............................
[2026-03-13 13:51:15] 2026-03-13 20:50:40,879 | INFO     | . Timing measurements:
[2026-03-13 13:51:15] 2026-03-13 20:50:40,879 | INFO     | . get job = 0 s
[2026-03-13 13:51:15] 2026-03-13 20:50:40,879 | INFO     | . initial setup = 21 s
[2026-03-13 13:51:15] 2026-03-13 20:50:40,879 | INFO     | . payload setup = 18 s
[2026-03-13 13:51:15] 2026-03-13 20:50:40,879 | INFO     | . stage-in = 0 s
[2026-03-13 13:51:15] 2026-03-13 20:50:40,879 | INFO     | . payload execution = 59 s
[2026-03-13 13:51:15] 2026-03-13 20:50:40,879 | INFO     | . stage-out = 0 s
[2026-03-13 13:51:15] 2026-03-13 20:50:40,879 | INFO     | . log creation = 0 s
[2026-03-13 13:51:15] 2026-03-13 20:50:40,879 | INFO     | ..............................
[2026-03-13 13:51:15] 2026-03-13 20:50:40,879 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-13 13:51:15] 2026-03-13 20:50:40,880 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7044619457/pilotlog.txt
[2026-03-13 13:51:15] 2026-03-13 20:50:41,001 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-13 13:51:15] - Log from pilotlog.txt -
[2026-03-13 13:51:15] 2026-03-13 20:50:40,870 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7044619457/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 13:51:15] 2026-03-13 20:50:40,871 | INFO     | extracted standard info from prmon json
[2026-03-13 13:51:15] 2026-03-13 20:50:40,871 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 13:51:15] 2026-03-13 20:50:40,871 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 13:51:15] 2026-03-13 20:50:40,871 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 13:51:15] 2026-03-13 20:50:40,871 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 13:51:15] 2026-03-13 20:50:40,878 | WARNING  | wrong length of table data, x=[1773434881.0], y=[1167.0] (must be same and length>=4)
[2026-03-13 13:51:15] 2026-03-13 20:50:40,879 | INFO     | could have reported an average CPU frequency of 2715 MHz (4 samples)
[2026-03-13 13:51:15] 2026-03-13 20:50:40,879 | INFO     | ..............................
[2026-03-13 13:51:15] 2026-03-13 20:50:40,879 | INFO     | . Timing measurements:
[2026-03-13 13:51:15] 2026-03-13 20:50:40,879 | INFO     | . get job = 0 s
[2026-03-13 13:51:15] 2026-03-13 20:50:40,879 | INFO     | . initial setup = 21 s
[2026-03-13 13:51:15] 2026-03-13 20:50:40,879 | INFO     | . payload setup = 18 s
[2026-03-13 13:51:15] 2026-03-13 20:50:40,879 | INFO     | . stage-in = 0 s
[2026-03-13 13:51:15] 2026-03-13 20:50:40,879 | INFO     | . payload execution = 59 s
[2026-03-13 13:51:15] 2026-03-13 20:50:40,879 | INFO     | . stage-out = 0 s
[2026-03-13 13:51:15] 2026-03-13 20:50:40,879 | INFO     | . log creation = 0 s
[2026-03-13 13:51:15] 2026-03-13 20:50:40,879 | INFO     | ..............................
[2026-03-13 13:51:15] 2026-03-13 20:50:40,879 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-13 13:51:15] 2026-03-13 20:50:40,880 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7044619457/pilotlog.txt
[2026-03-13 13:51:15] 2026-03-13 20:50:41,001 | WARNING  | 
[2026-03-13 13:51:15] [begin log extracts]
[2026-03-13 13:51:15] - Log from pilotlog.txt -
[2026-03-13 13:51:15] 2026-03-13 20:50:40,870 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7044619457/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 13:51:15] 2026-03-13 20:50:40,871 | INFO     | extracted standard info from prmon json
[2026-03-13 13:51:15] 2026-03-13 20:50:40,871 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 13:51:15] 2026-03-13 20:50:40,871 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 13:51:15] 2026-03-13 20:50:40,871 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 13:51:15] 2026-03-13 20:50:40,871 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 13:51:15] 2026-03-13 20:50:40,878 | WARNING  | wrong length of table data, x=[1773434881.0], y=[1167.0] (must be same and length>=4)
[2026-03-13 13:51:15] 2026-03-13 20:50:40,879 | INFO     | could have reported an average CPU frequency of 2715 MHz (4 samples)
[2026-03-13 13:51:15] 2026-03-13 20:50:40,879 | INFO     | ..............................
[2026-03-13 13:51:15] 2026-03-13 20:50:40,879 | INFO     | . Timing measurements:
[2026-03-13 13:51:15] 2026-03-13 20:50:40,879 | INFO     | . get job = 0 s
[2026-03-13 13:51:15] 2026-03-13 20:50:40,879 | INFO     | . initial setup = 21 s
[2026-03-13 13:51:15] 2026-03-13 20:50:40,879 | INFO     | . payload setup = 18 s
[2026-03-13 13:51:15] 2026-03-13 20:50:40,879 | INFO     | . stage-in = 0 s
[2026-03-13 13:51:15] 2026-03-13 20:50:40,879 | INFO     | . payload execution = 59 s
[2026-03-13 13:51:15] 2026-03-13 20:50:40,879 | INFO     | . stage-out = 0 s
[2026-03-13 13:51:15] 2026-03-13 20:50:40,879 | INFO     | . log creation = 0 s
[2026-03-13 13:51:15] 2026-03-13 20:50:40,879 | INFO     | ..............................
[2026-03-13 13:51:15] 2026-03-13 20:50:40,879 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-13 13:51:15] 2026-03-13 20:50:40,880 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7044619457/pilotlog.txt
[2026-03-13 13:51:15] [end log extracts]
[2026-03-13 13:51:15] 2026-03-13 20:50:41,001 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-13 13:51:15] 2026-03-13 20:50:41,002 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-13 13:51:15] 2026-03-13 20:50:41,282 | INFO     | 
[2026-03-13 13:51:15] 2026-03-13 20:50:41,282 | INFO     | job summary report
[2026-03-13 13:51:15] 2026-03-13 20:50:41,282 | INFO     | --------------------------------------------------
[2026-03-13 13:51:15] 2026-03-13 20:50:41,282 | INFO     | PanDA job id: 7044619457
[2026-03-13 13:51:15] 2026-03-13 20:50:41,283 | INFO     | task id: 48955015
[2026-03-13 13:51:15] 2026-03-13 20:50:41,283 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-13 13:48:29,870 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-13 13:51:15] 2026-03-13 20:50:41,283 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 13:51:15] 2026-03-13 20:50:41,283 | INFO     | pilot state: failed 
[2026-03-13 13:51:15] 2026-03-13 20:50:41,283 | INFO     | transexitcode: 65
[2026-03-13 13:51:15] 2026-03-13 20:50:41,283 | INFO     | exeerrorcode: 65
[2026-03-13 13:51:15] 2026-03-13 20:50:41,283 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-13 13:51:15] 2026-03-13 20:50:41,283 | INFO     | exitcode: 65
[2026-03-13 13:51:15] 2026-03-13 20:50:41,283 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-13 13:51:15] 2026-03-13 20:50:41,283 | INFO     | cpuconsumptiontime: 13 s
[2026-03-13 13:51:15] 2026-03-13 20:50:41,302 | INFO     | nevents: 0
[2026-03-13 13:51:15] 2026-03-13 20:50:41,302 | INFO     | neventsw: 0
[2026-03-13 13:51:15] 2026-03-13 20:50:41,302 | INFO     | pid: 3382846
[2026-03-13 13:51:15] 2026-03-13 20:50:41,302 | INFO     | pgrp: 3382846
[2026-03-13 13:51:15] 2026-03-13 20:50:41,302 | INFO     | corecount: 12
[2026-03-13 13:51:15] 2026-03-13 20:50:41,302 | INFO     | event service: False
[2026-03-13 13:51:15] 2026-03-13 20:50:41,303 | INFO     | sizes: {0: 2280235, 11: 2280235, 82: 2303538, 83: 2307830, 85: 2307886, 201: 2308052}
[2026-03-13 13:51:15] 2026-03-13 20:50:41,303 | INFO     | --------------------------------------------------
[2026-03-13 13:51:15] 2026-03-13 20:50:41,303 | INFO     | 
[2026-03-13 13:51:15] 2026-03-13 20:50:41,303 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-13 13:51:15] 2026-03-13 20:50:41,427 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 13:51:15] 2026-03-13 20:50:41,427 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 13:51:15] 2026-03-13 20:50:41,427 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 13:51:15] 2026-03-13 20:50:41,427 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 13:51:15] 2026-03-13 20:50:41,427 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 13:51:15] 2026-03-13 20:50:41,427 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 13:51:15] 2026-03-13 20:50:41,428 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 13:51:15] 2026-03-13 20:50:41,428 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 13:51:15] 2026-03-13 20:50:41,428 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 13:51:15] 2026-03-13 20:50:41,428 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 13:51:15] 2026-03-13 20:50:41,428 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 13:51:15] 2026-03-13 20:50:41,428 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 13:51:15] 2026-03-13 20:50:41,428 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 13:51:15] 2026-03-13 20:50:41,428 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 13:51:15] 2026-03-13 20:50:41,428 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 13:51:15] 2026-03-13 20:50:41,428 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 13:51:15] 2026-03-13 20:50:41,428 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 13:51:15] 2026-03-13 20:50:41,428 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 13:51:15] 2026-03-13 20:50:41,428 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 13:51:15] 2026-03-13 20:50:41,428 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 13:51:15] 2026-03-13 20:50:41,428 | INFO     | job 7044619457 has completed (purged errors)
[2026-03-13 13:51:15] 2026-03-13 20:50:41,429 | INFO     | overall cleanup function is called
[2026-03-13 13:51:15] 2026-03-13 20:50:42,435 | INFO     | --- collectZombieJob: --- 10, [3382846]
[2026-03-13 13:51:15] 2026-03-13 20:50:42,435 | INFO     | zombie collector waiting for pid 3382846
[2026-03-13 13:51:15] 2026-03-13 20:50:42,435 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 13:51:15] 2026-03-13 20:50:42,435 | INFO     | collected zombie processes
[2026-03-13 13:51:15] 2026-03-13 20:50:42,435 | INFO     | will attempt to kill all subprocesses of pid=3382846
[2026-03-13 13:51:15] 2026-03-13 20:50:42,873 | INFO     | process IDs to be killed: [3382846] (in reverse order)
[2026-03-13 13:51:15] 2026-03-13 20:50:42,957 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 13:51:15] 2026-03-13 20:50:42,957 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 13:51:15] 2026-03-13 20:50:42,967 | INFO     | did not find any defunct processes belonging to 3382846
[2026-03-13 13:51:15] 2026-03-13 20:50:42,976 | INFO     | did not find any defunct processes belonging to 3382846
[2026-03-13 13:51:15] 2026-03-13 20:50:42,976 | INFO     | ready for new job
[2026-03-13 13:51:15] 2026-03-13 20:50:42,976 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 13:51:15] 2026-03-13 20:50:42,977 | INFO     | **************************************
[2026-03-13 13:51:15] 2026-03-13 20:50:42,978 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 13:51:15] 2026-03-13 20:50:42,978 | INFO     | **************************************
[2026-03-13 13:51:15] 2026-03-13 20:50:42,978 | INFO     | 
[2026-03-13 13:51:15] 2026-03-13 20:50:42,980 | INFO     | architecture information:
[2026-03-13 13:51:15] 2026-03-13 20:50:42,980 | INFO     | executing command: cat /etc/os-release
[2026-03-13 13:51:15] 2026-03-13 20:50:42,993 | INFO     | cat /etc/os-release:
[2026-03-13 13:51:15] NAME="CentOS Linux"
[2026-03-13 13:51:15] VERSION="7 (Core)"
[2026-03-13 13:51:15] ID="centos"
[2026-03-13 13:51:15] ID_LIKE="rhel fedora"
[2026-03-13 13:51:15] VERSION_ID="7"
[2026-03-13 13:51:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 13:51:15] ANSI_COLOR="0;31"
[2026-03-13 13:51:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 13:51:15] HOME_URL="https://www.centos.org/"
[2026-03-13 13:51:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 13:51:15] 
[2026-03-13 13:51:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 13:51:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 13:51:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 13:51:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 13:51:15] 
[2026-03-13 13:51:15] 2026-03-13 20:50:42,993 | INFO     | **************************************
[2026-03-13 13:51:15] 2026-03-13 20:50:43,499 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-13 13:51:15] 2026-03-13 20:50:43,555 | INFO     | sufficient remaining disk space (2151384350720 B)
[2026-03-13 13:51:15] 2026-03-13 20:50:43,555 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 13:51:15] 2026-03-13 20:50:43,555 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 13:51:15] 2026-03-13 20:50:43,555 | INFO     | update_server=False
[2026-03-13 13:51:15] 2026-03-13 20:50:43,555 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 13:51:15] 2026-03-13 20:50:43,563 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 13:51:15] 2026-03-13 20:50:43,709 | INFO     | all payload control threads have been joined
[2026-03-13 13:51:15] 2026-03-13 20:50:43,738 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-13 13:51:15] 2026-03-13 20:50:43,738 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-13 13:51:15] 2026-03-13 20:50:43,738 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 13:51:15] 2026-03-13 20:50:43,738 | INFO     | will abort loop
[2026-03-13 13:51:15] 2026-03-13 20:50:44,304 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 13:51:15] 2026-03-13 20:50:44,526 | INFO     | all data control threads have been joined
[2026-03-13 13:51:15] 2026-03-13 20:50:44,561 | INFO     | [job] retrieve thread has finished
[2026-03-13 13:51:15] 2026-03-13 20:50:44,715 | INFO     | [payload] control thread has finished
[2026-03-13 13:51:15] 2026-03-13 20:50:44,732 | INFO     | all job control threads have been joined
[2026-03-13 13:51:15] 2026-03-13 20:50:44,744 | INFO     | [job] job monitor thread has finished
[2026-03-13 13:51:15] 2026-03-13 20:50:44,755 | INFO     | [payload] validate_post thread has finished
[2026-03-13 13:51:15] 2026-03-13 20:50:45,024 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 13:51:15] 2026-03-13 20:50:45,305 | INFO     | [job] validate thread has finished
[2026-03-13 13:51:15] 2026-03-13 20:50:45,532 | INFO     | [data] control thread has finished
[2026-03-13 13:51:15] 2026-03-13 20:50:45,547 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 13:51:15] 2026-03-13 20:50:45,577 | INFO     | [data] copytool_out thread has finished
[2026-03-13 13:51:15] 2026-03-13 20:50:45,591 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 13:51:15] 2026-03-13 20:50:45,622 | INFO     | [payload] failed_post thread has finished
[2026-03-13 13:51:15] 2026-03-13 20:50:45,740 | INFO     | [job] control thread has finished
[2026-03-13 13:51:15] 2026-03-13 20:50:45,817 | INFO     | [data] copytool_in thread has finished
[2026-03-13 13:51:15] 2026-03-13 20:50:45,832 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 13:51:15] 2026-03-13 20:50:46,276 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 13:51:15] 2026-03-13 20:50:47,282 | INFO     | [job] queue monitor thread has finished
[2026-03-13 13:51:15] 2026-03-13 20:50:48,313 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 13:51:15] 2026-03-13 20:51:08,132 | INFO     | [monitor] cgroup control has ended
[2026-03-13 13:51:15] 2026-03-13 20:51:09,135 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140596406445888)>', '<ExcThread(monitor, started 140595846686464)>']
[2026-03-13 13:51:15] 2026-03-13 20:51:13,776 | INFO     | PID=3378102 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-13 13:51:15] 2026-03-13 20:51:13,776 | INFO     | .. there are 42 such processes running
[2026-03-13 13:51:15] 2026-03-13 20:51:13,777 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 13:51:15] 2026-03-13 20:51:13,777 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 13:51:15] 2026-03-13 20:51:13,777 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 13:51:15] 2026-03-13 20:51:13,777 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 13:51:15] 2026-03-13 20:51:13,777 | INFO     | [monitor] control thread has ended
[2026-03-13 13:51:15] 2026-03-13 20:51:14,161 | INFO     | all workflow threads have been joined
[2026-03-13 13:51:15] 2026-03-13 20:51:14,161 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 13:51:15] 2026-03-13 20:51:14,161 | INFO     | traces error code: 0
[2026-03-13 13:51:15] 2026-03-13 20:51:14,162 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 13:51:15] 2026-03-13 20:51:14,670 [wrapper] ==== pilot stdout END ====
[2026-03-13 13:51:15] 2026-03-13 20:51:14,688 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 13:51:15] 2026-03-13 20:51:14,741 [wrapper] pilotpid: 3378102
[2026-03-13 13:51:15] 2026-03-13 20:51:14,756 [wrapper] Pilot exit status: 0
[2026-03-13 13:51:15] 2026-03-13 20:51:14,874 [wrapper] pandaids: 7044619457
[2026-03-13 13:51:15] 2026-03-13 20:51:15,373 [wrapper] cleanup supervisor_pilot 3378108 3378103
[2026-03-13 13:51:15] 2026-03-13 20:51:15,388 [wrapper] Test setup, not cleaning
[2026-03-13 13:51:15] 2026-03-13 20:51:15,410 [wrapper] apfmon messages muted
[2026-03-13 13:51:15] 2026-03-13 20:51:15,456 [wrapper] ==== wrapper stdout END ====
[2026-03-13 13:51:15] 2026-03-13 20:51:15,497 [wrapper] ==== wrapper stderr END ====
[2026-03-13 13:51:15]  *** Error codes and diagnostics ***
[2026-03-13 13:51:15]     "exeErrorCode": 65,
[2026-03-13 13:51:15]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-13 13:51:15]     "pilotErrorCode": 1305,
[2026-03-13 13:51:15]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-13 13:51:15]  *** Listing of results directory ***
[2026-03-13 13:51:15] total 432128
[2026-03-13 13:51:15] -rw-r--r--. 1 boinc boinc      5111 Mar 13 10:07 queuedata.json
[2026-03-13 13:51:15] -rw-r--r--. 1 boinc boinc    585013 Mar 13 10:07 pilot3.tar.gz
[2026-03-13 13:51:15] -rwx------. 1 boinc boinc     36322 Mar 13 10:07 runpilot2-wrapper.sh
[2026-03-13 13:51:15] -rw-r--r--. 1 boinc boinc       100 Mar 13 13:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 13:51:15] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 13:46 run_atlas
[2026-03-13 13:51:15] -rw-r--r--. 1 boinc boinc       105 Mar 13 13:46 job.xml
[2026-03-13 13:51:15] -rw-r--r--. 2 boinc boinc 438354766 Mar 13 13:46 EVNT.46701403._002420.pool.root.1
[2026-03-13 13:51:15] -rw-r--r--. 1 boinc boinc      6594 Mar 13 13:46 init_data.xml
[2026-03-13 13:51:15] -rw-r--r--. 2 boinc boinc     15845 Mar 13 13:46 start_atlas.sh
[2026-03-13 13:51:15] drwxrwx--x. 2 boinc boinc      4096 Mar 13 13:46 shared
[2026-03-13 13:51:15] -rw-r--r--. 2 boinc boinc    597531 Mar 13 13:46 input.tar.gz
[2026-03-13 13:51:15] -rw-r--r--. 1 boinc boinc         0 Mar 13 13:46 boinc_lockfile
[2026-03-13 13:51:15] -rw-r--r--. 1 boinc boinc      2572 Mar 13 13:46 pandaJob.out
[2026-03-13 13:51:15] -rw-------. 1 boinc boinc   1006721 Mar 13 13:46 agis_schedconf.cvmfs.json
[2026-03-13 13:51:15] -rw-------. 1 boinc boinc   1511579 Mar 13 13:46 agis_ddmendpoints.agis.ALL.json
[2026-03-13 13:51:15] -rw-------. 1 boinc boinc       444 Mar 13 13:47 workernode_map.json
[2026-03-13 13:51:15] drwx------. 5 boinc boinc      4096 Mar 13 13:47 pilot3
[2026-03-13 13:51:15] -rw-r--r--. 1 boinc boinc       523 Mar 13 13:48 boinc_task_state.xml
[2026-03-13 13:51:15] -rw-------. 1 boinc boinc       952 Mar 13 13:48 memory_monitor_summary.json
[2026-03-13 13:51:15] -rw-------. 1 boinc boinc     21706 Mar 13 13:48 log.48955015._018232.job.log.tgz.1
[2026-03-13 13:51:15] -rw-------. 1 boinc boinc      7023 Mar 13 13:50 heartbeat.json
[2026-03-13 13:51:15] -rw-------. 1 boinc boinc        95 Mar 13 13:51 pilot_heartbeat.json
[2026-03-13 13:51:15] -rw-r--r--. 1 boinc boinc      8192 Mar 13 13:51 boinc_mmap_file
[2026-03-13 13:51:15] -rw-------. 1 boinc boinc      5005 Mar 13 13:51 pilotlog.txt
[2026-03-13 13:51:15] -rw-r--r--. 1 boinc boinc        22 Mar 13 13:51 wrapper_checkpoint.txt
[2026-03-13 13:51:15] -rw-------. 1 boinc boinc     86943 Mar 13 13:51 log.48955015._018232.job.log.1
[2026-03-13 13:51:15] -rw-------. 1 boinc boinc       188 Mar 13 13:51 output.list
[2026-03-13 13:51:15] -rw-r--r--. 1 boinc boinc       620 Mar 13 13:51 runtime_log
[2026-03-13 13:51:15] -rw-------. 1 boinc boinc    122880 Mar 13 13:51 result.tar.gz
[2026-03-13 13:51:15] -rw-r--r--. 1 boinc boinc      8635 Mar 13 13:51 runtime_log.err
[2026-03-13 13:51:15] -rw-------. 1 boinc boinc       643 Mar 13 13:51 Fa8KDmaALL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmVbnLDmyrwETo.diag
[2026-03-13 13:51:15] -rw-r--r--. 1 boinc boinc     21799 Mar 13 13:51 stderr.txt
[2026-03-13 13:51:15] No HITS result produced
[2026-03-13 13:51:15]  *** Contents of shared directory: ***
[2026-03-13 13:51:15] total 428804
[2026-03-13 13:51:15] -rw-r--r--. 2 boinc boinc 438354766 Mar 13 13:46 ATLAS.root_0
[2026-03-13 13:51:15] -rw-r--r--. 2 boinc boinc     15845 Mar 13 13:46 start_atlas.sh
[2026-03-13 13:51:15] -rw-r--r--. 2 boinc boinc    597531 Mar 13 13:46 input.tar.gz
[2026-03-13 13:51:15] -rw-------. 1 boinc boinc    122880 Mar 13 13:51 result.tar.gz
13:51:16 (3374331): run_atlas exited; CPU time 21.873372
13:51:16 (3374331): called boinc_finish(0)

</stderr_txt>
]]>

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