Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:19:13 (3358222): wrapper (7.7.26015): starting
16:19:13 (3358222): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 16:19:13] Arguments: --nthreads 4
[2026-03-15 16:19:13] Threads: 4
[2026-03-15 16:19:13] Checking for CVMFS
[2026-03-15 16:19:13] No cvmfs_config command found, will try listing directly
[2026-03-15 16:19:13] CVMFS is ok
[2026-03-15 16:19:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 16:19:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 16:19:13] Further information can be found at the LHC@home message board.
[2026-03-15 16:19:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 16:19:13] Checking for apptainer binary...
[2026-03-15 16:19:13] which: no apptainer in ((null))
[2026-03-15 16:19:13] apptainer is not installed, using version from CVMFS
[2026-03-15 16:19:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 16:19:13] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2026-03-15 16:19:13] apptainer works
[2026-03-15 16:19:14] Set ATHENA_PROC_NUMBER=4
[2026-03-15 16:19:14] Set ATHENA_CORE_NUMBER=4
[2026-03-15 16:19:14] Starting ATLAS job with PandaID=7044117262
[2026-03-15 16:19:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 19:28:54]  *** The last 200 lines of the pilot log: ***
[2026-03-15 19:28:54] 2026-03-15 18:27:55,418 | INFO     | job 7044117262 has state=finished
[2026-03-15 19:28:54] 2026-03-15 18:27:55,418 | INFO     | preparing for final server update for job 7044117262 in state='finished'
[2026-03-15 19:28:54] 2026-03-15 18:27:55,418 | INFO     | reading metadata from: /var/lib/boinc/var/slot64/slots/0/PanDA_Pilot-7044117262/jobReport.json
[2026-03-15 19:28:54] 2026-03-15 18:27:55,421 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot64/slots/0/workernode_map.json
[2026-03-15 19:28:54] 2026-03-15 18:27:55,421 | INFO     | this job has now completed (state=finished)
[2026-03-15 19:28:54] 2026-03-15 18:27:55,421 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 19:28:54] 2026-03-15 18:27:55,421 | INFO     | log transfer has been attempted: DONE
[2026-03-15 19:28:54] 2026-03-15 18:27:55,422 | INFO     | job 7044117262 has finished - writing final server update
[2026-03-15 19:28:54] 2026-03-15 18:27:55,422 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_568060/.job.ad'
[2026-03-15 19:28:54] 2026-03-15 18:27:55,422 | INFO     | total number of processed events: 400 (read)
[2026-03-15 19:28:54] 2026-03-15 18:27:55,434 | INFO     | using path: /var/lib/boinc/var/slot64/slots/0/PanDA_Pilot-7044117262/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 19:28:54] 2026-03-15 18:27:55,435 | INFO     | extracted standard info from prmon json
[2026-03-15 19:28:54] 2026-03-15 18:27:55,435 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 19:28:54] 2026-03-15 18:27:55,435 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 19:28:54] 2026-03-15 18:27:55,435 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 19:28:54] 2026-03-15 18:27:55,435 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 19:28:54] 2026-03-15 18:27:55,439 | INFO     | fitting pss+swap vs Time
[2026-03-15 19:28:54] 2026-03-15 18:27:55,439 | INFO     | sum of square deviations: 1963274020.0
[2026-03-15 19:28:54] 2026-03-15 18:27:55,440 | INFO     | sum of deviations: -5153150253.000002
[2026-03-15 19:28:54] 2026-03-15 18:27:55,440 | INFO     | mean x: 1773593604.0
[2026-03-15 19:28:54] 2026-03-15 18:27:55,440 | INFO     | mean y: 2354506.502702703
[2026-03-15 19:28:54] 2026-03-15 18:27:55,441 | INFO     | intersect: 4657636569.050337
[2026-03-15 19:28:54] 2026-03-15 18:27:55,441 | INFO     | chi2: 1.2951860217264648
[2026-03-15 19:28:54] 2026-03-15 18:27:55,441 | INFO     | sum of square deviations: 1808350185.0
[2026-03-15 19:28:54] 2026-03-15 18:27:55,442 | INFO     | sum of deviations: -4966343548.0
[2026-03-15 19:28:54] 2026-03-15 18:27:55,442 | INFO     | mean x: 1773593451.5
[2026-03-15 19:28:54] 2026-03-15 18:27:55,443 | INFO     | mean y: 2354689.7555555557
[2026-03-15 19:28:54] 2026-03-15 18:27:55,443 | INFO     | intersect: 4873244447.555467
[2026-03-15 19:28:54] 2026-03-15 18:27:55,443 | INFO     | chi2: 1.2946509430270374
[2026-03-15 19:28:54] 2026-03-15 18:27:55,443 | INFO     | current chi2=1.2946509430270374 (change=0.041312884053065914 %)
[2026-03-15 19:28:54] 2026-03-15 18:27:55,443 | INFO     | right removable region: 179
[2026-03-15 19:28:54] 2026-03-15 18:27:55,444 | INFO     | sum of square deviations: 1808350185.0
[2026-03-15 19:28:54] 2026-03-15 18:27:55,445 | INFO     | sum of deviations: -26149804855.5
[2026-03-15 19:28:54] 2026-03-15 18:27:55,445 | INFO     | mean x: 1773593756.5
[2026-03-15 19:28:54] 2026-03-15 18:27:55,445 | INFO     | mean y: 2374847.55
[2026-03-15 19:28:54] 2026-03-15 18:27:55,445 | INFO     | intersect: 25649581351.089127
[2026-03-15 19:28:54] 2026-03-15 18:27:55,445 | INFO     | chi2: 0.052206100154551745
[2026-03-15 19:28:54] 2026-03-15 18:27:55,445 | INFO     | current chi2=0.052206100154551745 (change=95.96921992062872 %)
[2026-03-15 19:28:54] 2026-03-15 18:27:55,446 | INFO     | sum of square deviations: 1661798600.0
[2026-03-15 19:28:54] 2026-03-15 18:27:55,447 | INFO     | sum of deviations: -23004621156.999996
[2026-03-15 19:28:54] 2026-03-15 18:27:55,447 | INFO     | mean x: 1773593909.0
[2026-03-15 19:28:54] 2026-03-15 18:27:55,447 | INFO     | mean y: 2371570.0457142857
[2026-03-15 19:28:54] 2026-03-15 18:27:55,447 | INFO     | intersect: 24554598273.63526
[2026-03-15 19:28:54] 2026-03-15 18:27:55,447 | INFO     | chi2: 0.05073799770664344
[2026-03-15 19:28:54] 2026-03-15 18:27:55,447 | INFO     | current chi2=0.05073799770664344 (change=2.8121281680916854 %)
[2026-03-15 19:28:54] 2026-03-15 18:27:55,447 | INFO     | left removable region: 20
[2026-03-15 19:28:54] 2026-03-15 18:27:55,448 | INFO     | sum of square deviations: 1246386160.0
[2026-03-15 19:28:54] 2026-03-15 18:27:55,449 | INFO     | sum of deviations: -15107977909.0
[2026-03-15 19:28:54] 2026-03-15 18:27:55,449 | INFO     | mean x: 1773594031.0
[2026-03-15 19:28:54] 2026-03-15 18:27:55,449 | INFO     | mean y: 2363658.710691824
[2026-03-15 19:28:54] 2026-03-15 18:27:55,449 | INFO     | intersect: 21500852890.877922
[2026-03-15 19:28:54] 2026-03-15 18:27:55,449 | INFO     | chi2: 0.03806780780074477
[2026-03-15 19:28:54] 2026-03-15 18:27:55,449 | INFO     | current memory leak: -12.12 B/s (using 159 data points, chi2=0.04)
[2026-03-15 19:28:54] 2026-03-15 18:27:55,450 | INFO     | could have reported an average CPU frequency of 2556 MHz (10 samples)
[2026-03-15 19:28:54] 2026-03-15 18:27:55,450 | INFO     | ..............................
[2026-03-15 19:28:54] 2026-03-15 18:27:55,450 | INFO     | . Timing measurements:
[2026-03-15 19:28:54] 2026-03-15 18:27:55,450 | INFO     | . get job = 0 s
[2026-03-15 19:28:54] 2026-03-15 18:27:55,450 | INFO     | . initial setup = 6 s
[2026-03-15 19:28:54] 2026-03-15 18:27:55,450 | INFO     | . payload setup = 5 s
[2026-03-15 19:28:54] 2026-03-15 18:27:55,450 | INFO     | . stage-in = 0 s
[2026-03-15 19:28:54] 2026-03-15 18:27:55,451 | INFO     | . payload execution = 11278 s
[2026-03-15 19:28:54] 2026-03-15 18:27:55,451 | INFO     | . stage-out = 1 s
[2026-03-15 19:28:54] 2026-03-15 18:27:55,451 | INFO     | . log creation = 0 s
[2026-03-15 19:28:54] 2026-03-15 18:27:55,451 | INFO     | ..............................
[2026-03-15 19:28:54] 2026-03-15 18:27:55,541 | INFO     | 
[2026-03-15 19:28:54] 2026-03-15 18:27:55,541 | INFO     | job summary report
[2026-03-15 19:28:54] 2026-03-15 18:27:55,542 | INFO     | --------------------------------------------------
[2026-03-15 19:28:54] 2026-03-15 18:27:55,542 | INFO     | PanDA job id: 7044117262
[2026-03-15 19:28:54] 2026-03-15 18:27:55,542 | INFO     | task id: 48955010
[2026-03-15 19:28:54] 2026-03-15 18:27:55,542 | INFO     | errors: (none)
[2026-03-15 19:28:54] 2026-03-15 18:27:55,542 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 19:28:54] 2026-03-15 18:27:55,542 | INFO     | pilot state: finished 
[2026-03-15 19:28:54] 2026-03-15 18:27:55,542 | INFO     | transexitcode: 0
[2026-03-15 19:28:54] 2026-03-15 18:27:55,542 | INFO     | exeerrorcode: 0
[2026-03-15 19:28:54] 2026-03-15 18:27:55,542 | INFO     | exeerrordiag: 
[2026-03-15 19:28:54] 2026-03-15 18:27:55,542 | INFO     | exitcode: 0
[2026-03-15 19:28:54] 2026-03-15 18:27:55,542 | INFO     | exitmsg: OK
[2026-03-15 19:28:54] 2026-03-15 18:27:55,542 | INFO     | cpuconsumptiontime: 42771 s
[2026-03-15 19:28:54] 2026-03-15 18:27:55,542 | INFO     | nevents: 400
[2026-03-15 19:28:54] 2026-03-15 18:27:55,543 | INFO     | neventsw: 0
[2026-03-15 19:28:54] 2026-03-15 18:27:55,543 | INFO     | pid: 3367095
[2026-03-15 19:28:54] 2026-03-15 18:27:55,543 | INFO     | pgrp: 3367095
[2026-03-15 19:28:54] 2026-03-15 18:27:55,543 | INFO     | corecount: 4
[2026-03-15 19:28:54] 2026-03-15 18:27:55,543 | INFO     | event service: False
[2026-03-15 19:28:54] 2026-03-15 18:27:55,543 | INFO     | sizes: {0: 2279759, 1: 2280220, 11: 2280220, 11288: 2309736, 11290: 2318756, 11292: 2318812, 11294: 2319134}
[2026-03-15 19:28:54] 2026-03-15 18:27:55,543 | INFO     | --------------------------------------------------
[2026-03-15 19:28:54] 2026-03-15 18:27:55,543 | INFO     | 
[2026-03-15 19:28:54] 2026-03-15 18:27:55,543 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot64/slots/0
[2026-03-15 19:28:54] 2026-03-15 18:27:55,567 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 19:28:54] 2026-03-15 18:27:55,568 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 19:28:54] 2026-03-15 18:27:55,568 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 19:28:54] 2026-03-15 18:27:55,568 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 19:28:54] 2026-03-15 18:27:55,568 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 19:28:54] 2026-03-15 18:27:55,568 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 19:28:54] 2026-03-15 18:27:55,568 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 19:28:54] 2026-03-15 18:27:55,568 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 19:28:54] 2026-03-15 18:27:55,569 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 19:28:54] 2026-03-15 18:27:55,569 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 19:28:54] 2026-03-15 18:27:55,569 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 19:28:54] 2026-03-15 18:27:55,569 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 19:28:54] 2026-03-15 18:27:55,569 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 19:28:54] 2026-03-15 18:27:55,569 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 19:28:54] 2026-03-15 18:27:55,569 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 19:28:54] 2026-03-15 18:27:55,569 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 19:28:54] 2026-03-15 18:27:55,569 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 19:28:54] 2026-03-15 18:27:55,569 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 19:28:54] 2026-03-15 18:27:55,569 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 19:28:54] 2026-03-15 18:27:55,569 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 19:28:54] 2026-03-15 18:27:55,570 | INFO     | job 7044117262 has completed (purged errors)
[2026-03-15 19:28:54] 2026-03-15 18:27:55,570 | INFO     | overall cleanup function is called
[2026-03-15 19:28:54] 2026-03-15 18:27:56,578 | INFO     | --- collectZombieJob: --- 10, [3367095]
[2026-03-15 19:28:54] 2026-03-15 18:27:56,578 | INFO     | zombie collector waiting for pid 3367095
[2026-03-15 19:28:54] 2026-03-15 18:27:56,579 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 19:28:54] 2026-03-15 18:27:56,579 | INFO     | collected zombie processes
[2026-03-15 19:28:54] 2026-03-15 18:27:56,579 | INFO     | will attempt to kill all subprocesses of pid=3367095
[2026-03-15 19:28:54] 2026-03-15 18:27:56,966 | INFO     | process IDs to be killed: [3367095] (in reverse order)
[2026-03-15 19:28:54] 2026-03-15 18:27:57,097 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 19:28:54] 2026-03-15 18:27:57,098 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 19:28:54] 2026-03-15 18:27:57,112 | INFO     | did not find any defunct processes belonging to 3367095
[2026-03-15 19:28:54] 2026-03-15 18:27:57,124 | INFO     | did not find any defunct processes belonging to 3367095
[2026-03-15 19:28:54] 2026-03-15 18:27:57,125 | INFO     | ready for new job
[2026-03-15 19:28:54] 2026-03-15 18:27:57,125 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 19:28:54] 2026-03-15 18:27:57,127 | INFO     | **************************************
[2026-03-15 19:28:54] 2026-03-15 18:27:57,128 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 19:28:54] 2026-03-15 18:27:57,128 | INFO     | **************************************
[2026-03-15 19:28:54] 2026-03-15 18:27:57,128 | INFO     | 
[2026-03-15 19:28:54] 2026-03-15 18:27:57,132 | INFO     | architecture information:
[2026-03-15 19:28:54] 2026-03-15 18:27:57,132 | INFO     | executing command: cat /etc/os-release
[2026-03-15 19:28:54] 2026-03-15 18:27:57,150 | INFO     | cat /etc/os-release:
[2026-03-15 19:28:54] NAME="CentOS Linux"
[2026-03-15 19:28:54] VERSION="7 (Core)"
[2026-03-15 19:28:54] ID="centos"
[2026-03-15 19:28:54] ID_LIKE="rhel fedora"
[2026-03-15 19:28:54] VERSION_ID="7"
[2026-03-15 19:28:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 19:28:54] ANSI_COLOR="0;31"
[2026-03-15 19:28:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 19:28:54] HOME_URL="https://www.centos.org/"
[2026-03-15 19:28:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 19:28:54] 
[2026-03-15 19:28:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 19:28:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 19:28:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 19:28:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 19:28:54] 
[2026-03-15 19:28:54] 2026-03-15 18:27:57,150 | INFO     | **************************************
[2026-03-15 19:28:54] 2026-03-15 18:27:57,653 | INFO     | executing command: df -mP /var/lib/boinc/var/slot64/slots/0
[2026-03-15 19:28:54] 2026-03-15 18:27:57,670 | INFO     | sufficient remaining disk space (41881174016 B)
[2026-03-15 19:28:54] 2026-03-15 18:27:57,671 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 19:28:54] 2026-03-15 18:27:57,671 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 19:28:54] 2026-03-15 18:27:57,671 | INFO     | update_server=False
[2026-03-15 19:28:54] 2026-03-15 18:27:57,671 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 19:28:54] 2026-03-15 18:27:57,672 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 19:28:54] 2026-03-15 18:27:57,672 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 19:28:54] 2026-03-15 18:27:57,672 | INFO     | aborting loop
[2026-03-15 19:28:54] 2026-03-15 18:27:58,141 | INFO     | all data control threads have been joined
[2026-03-15 19:28:54] 2026-03-15 18:27:58,417 | INFO     | all job control threads have been joined
[2026-03-15 19:28:54] 2026-03-15 18:27:58,543 | INFO     | all payload control threads have been joined
[2026-03-15 19:28:54] 2026-03-15 18:27:58,677 | INFO     | [job] retrieve thread has finished
[2026-03-15 19:28:54] 2026-03-15 18:27:58,677 | INFO     | [job] job monitor thread has finished
[2026-03-15 19:28:54] 2026-03-15 18:27:58,724 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 19:28:54] 2026-03-15 18:27:58,983 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 19:28:54] 2026-03-15 18:27:59,112 | INFO     | [payload] failed_post thread has finished
[2026-03-15 19:28:54] 2026-03-15 18:27:59,147 | INFO     | [data] control thread has finished
[2026-03-15 19:28:54] 2026-03-15 18:27:59,251 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 19:28:54] 2026-03-15 18:27:59,422 | INFO     | [job] control thread has finished
[2026-03-15 19:28:54] 2026-03-15 18:27:59,529 | INFO     | [job] validate thread has finished
[2026-03-15 19:28:54] 2026-03-15 18:27:59,548 | INFO     | [payload] control thread has finished
[2026-03-15 19:28:54] 2026-03-15 18:27:59,676 | INFO     | [data] copytool_out thread has finished
[2026-03-15 19:28:54] 2026-03-15 18:27:59,722 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 19:28:54] 2026-03-15 18:27:59,845 | INFO     | [data] copytool_in thread has finished
[2026-03-15 19:28:54] 2026-03-15 18:27:59,999 | INFO     | [payload] validate_post thread has finished
[2026-03-15 19:28:54] 2026-03-15 18:28:00,551 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 19:28:54] 2026-03-15 18:28:01,553 | INFO     | [job] queue monitor thread has finished
[2026-03-15 19:28:54] 2026-03-15 18:28:02,988 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 19:28:54] 2026-03-15 18:28:08,139 | INFO     | job.realtimelogging is not enabled
[2026-03-15 19:28:54] 2026-03-15 18:28:09,144 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 19:28:54] 2026-03-15 18:28:28,185 | INFO     | PID=3362319 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 19:28:54] 2026-03-15 18:28:28,185 | INFO     | .. there are 12 such processes running
[2026-03-15 19:28:54] 2026-03-15 18:28:28,185 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 19:28:54] 2026-03-15 18:28:28,186 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 19:28:54] 2026-03-15 18:28:28,186 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 19:28:54] 2026-03-15 18:28:48,670 | INFO     | [monitor] cgroup control has ended
[2026-03-15 19:28:54] 2026-03-15 18:28:48,974 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23045384189760)>', '<ExcThread(monitor, started 23045141174016)>']
[2026-03-15 19:28:54] 2026-03-15 18:28:49,290 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 19:28:54] 2026-03-15 18:28:49,291 | INFO     | [monitor] control thread has ended
[2026-03-15 19:28:54] 2026-03-15 18:28:53,999 | INFO     | all workflow threads have been joined
[2026-03-15 19:28:54] 2026-03-15 18:28:54,000 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 19:28:54] 2026-03-15 18:28:54,000 | INFO     | traces error code: 0
[2026-03-15 19:28:54] 2026-03-15 18:28:54,000 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 19:28:54] 2026-03-15 18:28:54,189 [wrapper] ==== pilot stdout END ====
[2026-03-15 19:28:54] 2026-03-15 18:28:54,192 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 19:28:54] 2026-03-15 18:28:54,194 [wrapper] pilotpid: 3362319
[2026-03-15 19:28:54] 2026-03-15 18:28:54,197 [wrapper] Pilot exit status: 0
[2026-03-15 19:28:54] 2026-03-15 18:28:54,207 [wrapper] pandaids: 7044117262
[2026-03-15 19:28:54] 2026-03-15 18:28:54,286 [wrapper] cleanup supervisor_pilot 3598430 3362320
[2026-03-15 19:28:54] 2026-03-15 18:28:54,289 [wrapper] Test setup, not cleaning
[2026-03-15 19:28:54] 2026-03-15 18:28:54,291 [wrapper] apfmon messages muted
[2026-03-15 19:28:54] 2026-03-15 18:28:54,294 [wrapper] ==== wrapper stdout END ====
[2026-03-15 19:28:54] 2026-03-15 18:28:54,296 [wrapper] ==== wrapper stderr END ====
[2026-03-15 19:28:54]  *** Error codes and diagnostics ***
[2026-03-15 19:28:54]     "exeErrorCode": 0,
[2026-03-15 19:28:54]     "exeErrorDiag": "",
[2026-03-15 19:28:54]     "pilotErrorCode": 0,
[2026-03-15 19:28:54]     "pilotErrorDiag": "",
[2026-03-15 19:28:54]  *** Listing of results directory ***
[2026-03-15 19:28:54] total 622948
[2026-03-15 19:28:54] -rw-r--r--. 1 boinc boinc    585013 Mar 13 13:53 pilot3.tar.gz
[2026-03-15 19:28:54] -rw-r--r--. 1 boinc boinc      5111 Mar 13 14:07 queuedata.json
[2026-03-15 19:28:54] -rwx------. 1 boinc boinc     36322 Mar 13 14:08 runpilot2-wrapper.sh
[2026-03-15 19:28:54] -rw-r--r--. 1 boinc boinc       100 Mar 15 16:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 19:28:54] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 16:19 run_atlas
[2026-03-15 19:28:54] -rw-r--r--. 1 boinc boinc       105 Mar 15 16:19 job.xml
[2026-03-15 19:28:54] -rw-r--r--. 1 boinc boinc      6563 Mar 15 16:19 init_data.xml
[2026-03-15 19:28:54] -rw-r--r--. 2 boinc boinc 437565940 Mar 15 16:19 EVNT.46701403._001598.pool.root.1
[2026-03-15 19:28:54] -rw-r--r--. 2 boinc boinc     15845 Mar 15 16:19 start_atlas.sh
[2026-03-15 19:28:54] drwxrwx--x. 2 boinc boinc      4096 Mar 15 16:19 shared
[2026-03-15 19:28:54] -rw-r--r--. 2 boinc boinc    597528 Mar 15 16:19 input.tar.gz
[2026-03-15 19:28:54] -rw-r--r--. 1 boinc boinc         0 Mar 15 16:19 boinc_lockfile
[2026-03-15 19:28:54] -rw-r--r--. 1 boinc boinc      2564 Mar 15 16:19 pandaJob.out
[2026-03-15 19:28:54] -rw-------. 1 boinc boinc   1006473 Mar 15 16:19 agis_schedconf.cvmfs.json
[2026-03-15 19:28:54] -rw-------. 1 boinc boinc       451 Mar 15 16:19 workernode_map.json
[2026-03-15 19:28:54] drwx------. 5 boinc boinc      4096 Mar 15 16:19 pilot3
[2026-03-15 19:28:54] -rw-------. 1 boinc boinc 192442143 Mar 15 19:27 HITS.48955010._030237.pool.root.1
[2026-03-15 19:28:54] -rw-r--r--. 1 boinc boinc       530 Mar 15 19:27 boinc_task_state.xml
[2026-03-15 19:28:54] -rw-------. 1 boinc boinc      1035 Mar 15 19:27 memory_monitor_summary.json
[2026-03-15 19:28:54] -rw-------. 1 boinc boinc   1511579 Mar 15 19:27 agis_ddmendpoints.agis.ALL.json
[2026-03-15 19:28:54] -rw-------. 1 boinc boinc    385588 Mar 15 19:27 log.48955010._030237.job.log.tgz.1
[2026-03-15 19:28:54] -rw-------. 1 boinc boinc        95 Mar 15 19:27 pilot_heartbeat.json
[2026-03-15 19:28:54] -rw-------. 1 boinc boinc      6428 Mar 15 19:27 heartbeat.json
[2026-03-15 19:28:54] -rw-r--r--. 1 boinc boinc      8192 Mar 15 19:28 boinc_mmap_file
[2026-03-15 19:28:54] -rw-r--r--. 1 boinc boinc        27 Mar 15 19:28 wrapper_checkpoint.txt
[2026-03-15 19:28:54] -rw-------. 1 boinc boinc      4901 Mar 15 19:28 pilotlog.txt
[2026-03-15 19:28:54] -rw-------. 1 boinc boinc   1594160 Mar 15 19:28 log.48955010._030237.job.log.1
[2026-03-15 19:28:54] -rw-------. 1 boinc boinc       357 Mar 15 19:28 output.list
[2026-03-15 19:28:54] -rw-r--r--. 1 boinc boinc       620 Mar 15 19:28 runtime_log
[2026-03-15 19:28:54] -rw-------. 1 boinc boinc   1996800 Mar 15 19:28 result.tar.gz
[2026-03-15 19:28:54] -rw-r--r--. 1 boinc boinc      9205 Mar 15 19:28 runtime_log.err
[2026-03-15 19:28:54] -rw-------. 1 boinc boinc       666 Mar 15 19:28 lX1KDmbQHL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmTXpLDmYWkMQn.diag
[2026-03-15 19:28:54] -rw-r--r--. 1 boinc boinc     12935 Mar 15 19:28 stderr.txt
[2026-03-15 19:28:54] HITS file was successfully produced:
[2026-03-15 19:28:54] -rw-------. 1 boinc boinc 192442143 Mar 15 19:27 shared/HITS.pool.root.1
[2026-03-15 19:28:54]  *** Contents of shared directory: ***
[2026-03-15 19:28:54] total 617804
[2026-03-15 19:28:54] -rw-r--r--. 2 boinc boinc 437565940 Mar 15 16:19 ATLAS.root_0
[2026-03-15 19:28:54] -rw-r--r--. 2 boinc boinc     15845 Mar 15 16:19 start_atlas.sh
[2026-03-15 19:28:54] -rw-r--r--. 2 boinc boinc    597528 Mar 15 16:19 input.tar.gz
[2026-03-15 19:28:54] -rw-------. 1 boinc boinc 192442143 Mar 15 19:27 HITS.pool.root.1
[2026-03-15 19:28:54] -rw-------. 1 boinc boinc   1996800 Mar 15 19:28 result.tar.gz
19:28:56 (3358222): run_atlas exited; CPU time 43229.690987
19:28:56 (3358222): called boinc_finish(0)

</stderr_txt>
]]>

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