Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:07:47 (341409): wrapper (7.7.26015): starting
02:07:47 (341409): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 02:07:48] Arguments: --nthreads 4
[2026-03-15 02:07:48] Threads: 4
[2026-03-15 02:07:48] Checking for CVMFS
[2026-03-15 02:07:48] No cvmfs_config command found, will try listing directly
[2026-03-15 02:07:48] CVMFS is ok
[2026-03-15 02:07:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 02:07:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 02:07:48] Further information can be found at the LHC@home message board.
[2026-03-15 02:07:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 02:07:48] Checking for apptainer binary...
[2026-03-15 02:07:48] which: no apptainer in ((null))
[2026-03-15 02:07:48] apptainer is not installed, using version from CVMFS
[2026-03-15 02:07:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 02:07:48] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot256/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-15 02:07:48] apptainer works
[2026-03-15 02:07:48] Set ATHENA_PROC_NUMBER=4
[2026-03-15 02:07:48] Set ATHENA_CORE_NUMBER=4
[2026-03-15 02:07:48] Starting ATLAS job with PandaID=7053294150
[2026-03-15 02:07:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot256/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 03:49:16]  *** The last 200 lines of the pilot log: ***
[2026-03-15 03:49:16]  filetype=log
[2026-03-15 03:49:16]  guid=75ed7ed4-043e-4929-86c9-aa2d38578789
[2026-03-15 03:49:16]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-15 03:49:16]  is_altstaged=None
[2026-03-15 03:49:16]  is_tar=False
[2026-03-15 03:49:16]  lfn=log.48967085._020645.job.log.tgz.1
[2026-03-15 03:49:16]  mtime=0
[2026-03-15 03:49:16]  protocol_id=None
[2026-03-15 03:49:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-15 03:49:16]  replicas=None
[2026-03-15 03:49:16]  scope=mc23_13p6TeV
[2026-03-15 03:49:16]  status=None
[2026-03-15 03:49:16]  status_code=0
[2026-03-15 03:49:16]  storage_token=
[2026-03-15 03:49:16]  surl=/var/lib/boinc/var/slot256/slots/0/PanDA_Pilot-7053294150/log.48967085._020645.job.log.tgz.1
[2026-03-15 03:49:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b2/2e/log.48967085._020645.job.log.tgz.1
[2026-03-15 03:49:16]  workdir=None
[2026-03-15 03:49:16] ]
[2026-03-15 03:49:16] 2026-03-15 02:48:27,273 | INFO     | transferring file log.48967085._020645.job.log.tgz.1 from /var/lib/boinc/var/slot256/slots/0/PanDA_Pilot-7053294150/log.48967085._020645.job.log.tgz.1 to /var/lib/
[2026-03-15 03:49:16] 2026-03-15 02:48:27,273 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot256/slots/0/PanDA_Pilot-7053294150/log.48967085._020645.job.log.tgz.1 /var/lib/boinc/var/slot256/slots/0/
[2026-03-15 03:49:16] 2026-03-15 02:48:27,285 | INFO     | number of running child processes to parent process 360025: 1
[2026-03-15 03:49:16] 2026-03-15 02:48:27,285 | INFO     | maximum number of monitored processes: 6
[2026-03-15 03:49:16] 2026-03-15 02:48:27,289 | INFO     | adding to output.list: log.48967085._020645.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b2/2e/log.48967085._020645.job.log.tg
[2026-03-15 03:49:16] 2026-03-15 02:48:27,290 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-15 03:49:16] 2026-03-15 02:48:27,290 | INFO     | summary of transferred files:
[2026-03-15 03:49:16] 2026-03-15 02:48:27,290 | INFO     |  -- lfn=log.48967085._020645.job.log.tgz.1, status_code=0, status=transferred
[2026-03-15 03:49:16] 2026-03-15 02:48:27,290 | INFO     | stage-out finished correctly
[2026-03-15 03:49:16] 2026-03-15 02:48:28,610 | INFO     | time since job start (6028s) is within the limit (345600.0s)
[2026-03-15 03:49:16] 2026-03-15 02:48:29,273 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-15 03:49:16] 2026-03-15 02:48:29,324 | INFO     | job 7053294150 has state=finished
[2026-03-15 03:49:16] 2026-03-15 02:48:29,324 | INFO     | preparing for final server update for job 7053294150 in state='finished'
[2026-03-15 03:49:16] 2026-03-15 02:48:29,324 | INFO     | reading metadata from: /var/lib/boinc/var/slot256/slots/0/PanDA_Pilot-7053294150/jobReport.json
[2026-03-15 03:49:16] 2026-03-15 02:48:29,325 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot256/slots/0/workernode_map.json
[2026-03-15 03:49:16] 2026-03-15 02:48:29,325 | INFO     | this job has now completed (state=finished)
[2026-03-15 03:49:16] 2026-03-15 02:48:29,325 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 03:49:16] 2026-03-15 02:48:29,325 | INFO     | log transfer has been attempted: DONE
[2026-03-15 03:49:16] 2026-03-15 02:48:29,325 | INFO     | job 7053294150 has finished - writing final server update
[2026-03-15 03:49:16] 2026-03-15 02:48:29,325 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1512286/.job.ad'
[2026-03-15 03:49:16] 2026-03-15 02:48:29,326 | INFO     | total number of processed events: 400 (read)
[2026-03-15 03:49:16] 2026-03-15 02:48:29,337 | INFO     | using path: /var/lib/boinc/var/slot256/slots/0/PanDA_Pilot-7053294150/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 03:49:16] 2026-03-15 02:48:29,337 | INFO     | extracted standard info from prmon json
[2026-03-15 03:49:16] 2026-03-15 02:48:29,337 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 03:49:16] 2026-03-15 02:48:29,337 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 03:49:16] 2026-03-15 02:48:29,337 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 03:49:16] 2026-03-15 02:48:29,337 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 03:49:16] 2026-03-15 02:48:29,338 | INFO     | fitting pss+swap vs Time
[2026-03-15 03:49:16] 2026-03-15 02:48:29,338 | INFO     | sum of square deviations: 241429643.0
[2026-03-15 03:49:16] 2026-03-15 02:48:29,338 | INFO     | sum of deviations: 857483740.5
[2026-03-15 03:49:16] 2026-03-15 02:48:29,338 | INFO     | mean x: 1773539981.5
[2026-03-15 03:49:16] 2026-03-15 02:48:29,338 | INFO     | mean y: 2327904.663043478
[2026-03-15 03:49:16] 2026-03-15 02:48:29,338 | INFO     | intersect: -6296739924.646222
[2026-03-15 03:49:16] 2026-03-15 02:48:29,339 | INFO     | chi2: 0.0009823286445634206
[2026-03-15 03:49:16] 2026-03-15 02:48:29,339 | INFO     | current memory leak: 3.55 B/s (using 92 data points, chi2=0.00)
[2026-03-15 03:49:16] 2026-03-15 02:48:29,339 | INFO     | could have reported an average CPU frequency of 3600 MHz (7 samples)
[2026-03-15 03:49:16] 2026-03-15 02:48:29,339 | INFO     | ..............................
[2026-03-15 03:49:16] 2026-03-15 02:48:29,339 | INFO     | . Timing measurements:
[2026-03-15 03:49:16] 2026-03-15 02:48:29,339 | INFO     | . get job = 0 s
[2026-03-15 03:49:16] 2026-03-15 02:48:29,339 | INFO     | . initial setup = 5 s
[2026-03-15 03:49:16] 2026-03-15 02:48:29,339 | INFO     | . payload setup = 5 s
[2026-03-15 03:49:16] 2026-03-15 02:48:29,339 | INFO     | . stage-in = 0 s
[2026-03-15 03:49:16] 2026-03-15 02:48:29,339 | INFO     | . payload execution = 6005 s
[2026-03-15 03:49:16] 2026-03-15 02:48:29,339 | INFO     | . stage-out = 0 s
[2026-03-15 03:49:16] 2026-03-15 02:48:29,339 | INFO     | . log creation = 0 s
[2026-03-15 03:49:16] 2026-03-15 02:48:29,339 | INFO     | ..............................
[2026-03-15 03:49:16] 2026-03-15 02:48:29,369 | INFO     | 
[2026-03-15 03:49:16] 2026-03-15 02:48:29,370 | INFO     | job summary report
[2026-03-15 03:49:16] 2026-03-15 02:48:29,370 | INFO     | --------------------------------------------------
[2026-03-15 03:49:16] 2026-03-15 02:48:29,370 | INFO     | PanDA job id: 7053294150
[2026-03-15 03:49:16] 2026-03-15 02:48:29,370 | INFO     | task id: 48967085
[2026-03-15 03:49:16] 2026-03-15 02:48:29,370 | INFO     | errors: (none)
[2026-03-15 03:49:16] 2026-03-15 02:48:29,370 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 03:49:16] 2026-03-15 02:48:29,370 | INFO     | pilot state: finished 
[2026-03-15 03:49:16] 2026-03-15 02:48:29,370 | INFO     | transexitcode: 0
[2026-03-15 03:49:16] 2026-03-15 02:48:29,370 | INFO     | exeerrorcode: 0
[2026-03-15 03:49:16] 2026-03-15 02:48:29,370 | INFO     | exeerrordiag: 
[2026-03-15 03:49:16] 2026-03-15 02:48:29,370 | INFO     | exitcode: 0
[2026-03-15 03:49:16] 2026-03-15 02:48:29,370 | INFO     | exitmsg: OK
[2026-03-15 03:49:16] 2026-03-15 02:48:29,370 | INFO     | cpuconsumptiontime: 23023 s
[2026-03-15 03:49:16] 2026-03-15 02:48:29,370 | INFO     | nevents: 400
[2026-03-15 03:49:16] 2026-03-15 02:48:29,370 | INFO     | neventsw: 0
[2026-03-15 03:49:16] 2026-03-15 02:48:29,370 | INFO     | pid: 360025
[2026-03-15 03:49:16] 2026-03-15 02:48:29,370 | INFO     | pgrp: 360025
[2026-03-15 03:49:16] 2026-03-15 02:48:29,370 | INFO     | corecount: 4
[2026-03-15 03:49:16] 2026-03-15 02:48:29,370 | INFO     | event service: False
[2026-03-15 03:49:16] 2026-03-15 02:48:29,370 | INFO     | sizes: {0: 2280254, 11: 2280254, 6013: 2307127, 6015: 2316177, 6017: 2316427}
[2026-03-15 03:49:16] 2026-03-15 02:48:29,370 | INFO     | --------------------------------------------------
[2026-03-15 03:49:16] 2026-03-15 02:48:29,370 | INFO     | 
[2026-03-15 03:49:16] 2026-03-15 02:48:29,370 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot256/slots/0
[2026-03-15 03:49:16] 2026-03-15 02:48:29,388 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 03:49:16] 2026-03-15 02:48:29,388 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 03:49:16] 2026-03-15 02:48:29,388 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 03:49:16] 2026-03-15 02:48:29,389 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 03:49:16] 2026-03-15 02:48:29,389 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 03:49:16] 2026-03-15 02:48:29,389 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 03:49:16] 2026-03-15 02:48:29,389 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 03:49:16] 2026-03-15 02:48:29,389 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 03:49:16] 2026-03-15 02:48:29,389 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 03:49:16] 2026-03-15 02:48:29,389 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 03:49:16] 2026-03-15 02:48:29,389 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 03:49:16] 2026-03-15 02:48:29,389 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 03:49:16] 2026-03-15 02:48:29,389 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 03:49:16] 2026-03-15 02:48:29,389 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 03:49:16] 2026-03-15 02:48:29,389 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 03:49:16] 2026-03-15 02:48:29,389 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 03:49:16] 2026-03-15 02:48:29,389 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 03:49:16] 2026-03-15 02:48:29,389 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 03:49:16] 2026-03-15 02:48:29,389 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 03:49:16] 2026-03-15 02:48:29,389 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 03:49:16] 2026-03-15 02:48:29,389 | INFO     | job 7053294150 has completed (purged errors)
[2026-03-15 03:49:16] 2026-03-15 02:48:29,389 | INFO     | overall cleanup function is called
[2026-03-15 03:49:16] 2026-03-15 02:48:30,396 | INFO     | --- collectZombieJob: --- 10, [360025]
[2026-03-15 03:49:16] 2026-03-15 02:48:30,396 | INFO     | zombie collector waiting for pid 360025
[2026-03-15 03:49:16] 2026-03-15 02:48:30,396 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 03:49:16] 2026-03-15 02:48:30,396 | INFO     | collected zombie processes
[2026-03-15 03:49:16] 2026-03-15 02:48:30,396 | INFO     | will attempt to kill all subprocesses of pid=360025
[2026-03-15 03:49:16] 2026-03-15 02:48:30,867 | INFO     | process IDs to be killed: [360025] (in reverse order)
[2026-03-15 03:49:16] 2026-03-15 02:48:31,091 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 03:49:16] 2026-03-15 02:48:31,091 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 03:49:16] 2026-03-15 02:48:31,120 | INFO     | did not find any defunct processes belonging to 360025
[2026-03-15 03:49:16] 2026-03-15 02:48:31,147 | INFO     | did not find any defunct processes belonging to 360025
[2026-03-15 03:49:16] 2026-03-15 02:48:31,147 | INFO     | ready for new job
[2026-03-15 03:49:16] 2026-03-15 02:48:31,147 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 03:49:16] 2026-03-15 02:48:31,149 | INFO     | **************************************
[2026-03-15 03:49:16] 2026-03-15 02:48:31,149 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 03:49:16] 2026-03-15 02:48:31,149 | INFO     | **************************************
[2026-03-15 03:49:16] 2026-03-15 02:48:31,149 | INFO     | 
[2026-03-15 03:49:16] 2026-03-15 02:48:31,155 | INFO     | architecture information:
[2026-03-15 03:49:16] 2026-03-15 02:48:31,155 | INFO     | executing command: cat /etc/os-release
[2026-03-15 03:49:16] 2026-03-15 02:48:31,168 | INFO     | cat /etc/os-release:
[2026-03-15 03:49:16] NAME="CentOS Linux"
[2026-03-15 03:49:16] VERSION="7 (Core)"
[2026-03-15 03:49:16] ID="centos"
[2026-03-15 03:49:16] ID_LIKE="rhel fedora"
[2026-03-15 03:49:16] VERSION_ID="7"
[2026-03-15 03:49:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 03:49:16] ANSI_COLOR="0;31"
[2026-03-15 03:49:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 03:49:16] HOME_URL="https://www.centos.org/"
[2026-03-15 03:49:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 03:49:16] 
[2026-03-15 03:49:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 03:49:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 03:49:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 03:49:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 03:49:16] 
[2026-03-15 03:49:16] 2026-03-15 02:48:31,169 | INFO     | **************************************
[2026-03-15 03:49:16] 2026-03-15 02:48:31,671 | INFO     | executing command: df -mP /var/lib/boinc/var/slot256/slots/0
[2026-03-15 03:49:16] 2026-03-15 02:48:31,687 | INFO     | sufficient remaining disk space (23171432448 B)
[2026-03-15 03:49:16] 2026-03-15 02:48:31,687 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 03:49:16] 2026-03-15 02:48:31,687 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 03:49:16] 2026-03-15 02:48:31,687 | INFO     | update_server=False
[2026-03-15 03:49:16] 2026-03-15 02:48:31,687 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 03:49:16] 2026-03-15 02:48:31,688 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 03:49:16] 2026-03-15 02:48:31,688 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 03:49:16] 2026-03-15 02:48:31,688 | INFO     | aborting loop
[2026-03-15 03:49:16] 2026-03-15 02:48:32,011 | INFO     | all data control threads have been joined
[2026-03-15 03:49:16] 2026-03-15 02:48:32,692 | INFO     | [job] retrieve thread has finished
[2026-03-15 03:49:16] 2026-03-15 02:48:32,694 | INFO     | [job] job monitor thread has finished
[2026-03-15 03:49:16] 2026-03-15 02:48:32,725 | INFO     | all job control threads have been joined
[2026-03-15 03:49:16] 2026-03-15 02:48:32,755 | INFO     | all payload control threads have been joined
[2026-03-15 03:49:16] 2026-03-15 02:48:32,809 | INFO     | [payload] validate_post thread has finished
[2026-03-15 03:49:16] 2026-03-15 02:48:32,827 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 03:49:16] 2026-03-15 02:48:33,017 | INFO     | [data] control thread has finished
[2026-03-15 03:49:16] 2026-03-15 02:48:33,037 | INFO     | [job] validate thread has finished
[2026-03-15 03:49:16] 2026-03-15 02:48:33,173 | INFO     | [data] copytool_in thread has finished
[2026-03-15 03:49:16] 2026-03-15 02:48:33,217 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 03:49:16] 2026-03-15 02:48:33,327 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 03:49:16] 2026-03-15 02:48:33,545 | INFO     | [payload] failed_post thread has finished
[2026-03-15 03:49:16] 2026-03-15 02:48:33,730 | INFO     | [job] control thread has finished
[2026-03-15 03:49:16] 2026-03-15 02:48:33,760 | INFO     | [payload] control thread has finished
[2026-03-15 03:49:16] 2026-03-15 02:48:33,817 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 03:49:16] 2026-03-15 02:48:34,380 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 03:49:16] 2026-03-15 02:48:34,833 | INFO     | [data] copytool_out thread has finished
[2026-03-15 03:49:16] 2026-03-15 02:48:35,385 | INFO     | [job] queue monitor thread has finished
[2026-03-15 03:49:16] 2026-03-15 02:48:35,693 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 03:49:16] 2026-03-15 02:48:42,600 | INFO     | job.realtimelogging is not enabled
[2026-03-15 03:49:16] 2026-03-15 02:48:43,605 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 03:49:16] 2026-03-15 02:49:02,244 | INFO     | PID=347960 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-15 03:49:16] 2026-03-15 02:49:02,244 | INFO     | .. there are 49 such processes running
[2026-03-15 03:49:16] 2026-03-15 02:49:02,245 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 03:49:16] 2026-03-15 02:49:02,245 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 03:49:16] 2026-03-15 02:49:02,245 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 03:49:16] 2026-03-15 02:49:10,428 | INFO     | [monitor] cgroup control has ended
[2026-03-15 03:49:16] 2026-03-15 02:49:11,033 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23123977664320)>', '<ExcThread(monitor, started 23123731937024)>']
[2026-03-15 03:49:16] 2026-03-15 02:49:11,290 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 03:49:16] 2026-03-15 02:49:11,290 | INFO     | [monitor] control thread has ended
[2026-03-15 03:49:16] 2026-03-15 02:49:16,058 | INFO     | all workflow threads have been joined
[2026-03-15 03:49:16] 2026-03-15 02:49:16,058 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 03:49:16] 2026-03-15 02:49:16,058 | INFO     | traces error code: 0
[2026-03-15 03:49:16] 2026-03-15 02:49:16,059 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 03:49:16] 2026-03-15 02:49:16,209 [wrapper] ==== pilot stdout END ====
[2026-03-15 03:49:16] 2026-03-15 02:49:16,211 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 03:49:16] 2026-03-15 02:49:16,213 [wrapper] pilotpid: 347960
[2026-03-15 03:49:16] 2026-03-15 02:49:16,216 [wrapper] Pilot exit status: 0
[2026-03-15 03:49:16] 2026-03-15 02:49:16,225 [wrapper] pandaids: 7053294150
[2026-03-15 03:49:16] 2026-03-15 02:49:16,357 [wrapper] cleanup supervisor_pilot 1232630 347961
[2026-03-15 03:49:16] 2026-03-15 02:49:16,359 [wrapper] Test setup, not cleaning
[2026-03-15 03:49:16] 2026-03-15 02:49:16,361 [wrapper] apfmon messages muted
[2026-03-15 03:49:16] 2026-03-15 02:49:16,365 [wrapper] ==== wrapper stdout END ====
[2026-03-15 03:49:16] 2026-03-15 02:49:16,367 [wrapper] ==== wrapper stderr END ====
[2026-03-15 03:49:16]  *** Error codes and diagnostics ***
[2026-03-15 03:49:16]     "exeErrorCode": 0,
[2026-03-15 03:49:16]     "exeErrorDiag": "",
[2026-03-15 03:49:16]     "pilotErrorCode": 0,
[2026-03-15 03:49:16]     "pilotErrorDiag": "",
[2026-03-15 03:49:16]  *** Listing of results directory ***
[2026-03-15 03:49:16] total 411168
[2026-03-15 03:49:16] -rw-r--r--. 1 boinc boinc    602624 Mar 10 17:47 pilot3.tar.gz
[2026-03-15 03:49:16] -rwx------. 1 boinc boinc     36322 Mar 13 12:59 runpilot2-wrapper.sh
[2026-03-15 03:49:16] -rw-r--r--. 1 boinc boinc      5111 Mar 13 13:00 queuedata.json
[2026-03-15 03:49:16] -rw-r--r--. 1 boinc boinc       100 Mar 15 02:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 03:49:16] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 02:07 run_atlas
[2026-03-15 03:49:16] -rw-r--r--. 1 boinc boinc       105 Mar 15 02:07 job.xml
[2026-03-15 03:49:16] -rw-r--r--. 1 boinc boinc      6709 Mar 15 02:07 init_data.xml
[2026-03-15 03:49:16] -rw-r--r--. 2 boinc boinc 212069763 Mar 15 02:07 EVNT.48967083._000847.pool.root.1
[2026-03-15 03:49:16] -rw-r--r--. 2 boinc boinc     15845 Mar 15 02:07 start_atlas.sh
[2026-03-15 03:49:16] drwxrwx--x. 2 boinc boinc      4096 Mar 15 02:07 shared
[2026-03-15 03:49:16] -rw-r--r--. 2 boinc boinc    616295 Mar 15 02:07 input.tar.gz
[2026-03-15 03:49:16] -rw-r--r--. 1 boinc boinc         0 Mar 15 02:07 boinc_lockfile
[2026-03-15 03:49:16] -rw-r--r--. 1 boinc boinc      2563 Mar 15 02:07 pandaJob.out
[2026-03-15 03:49:16] -rw-------. 1 boinc boinc   1006481 Mar 15 02:07 agis_schedconf.cvmfs.json
[2026-03-15 03:49:16] -rw-------. 1 boinc boinc   1511579 Mar 15 02:07 agis_ddmendpoints.agis.ALL.json
[2026-03-15 03:49:16] -rw-------. 1 boinc boinc       445 Mar 15 02:07 workernode_map.json
[2026-03-15 03:49:16] drwx------. 7 boinc boinc      4096 Mar 15 02:08 pilot3
[2026-03-15 03:49:16] -rw-------. 1 boinc boinc 202682932 Mar 15 03:48 HITS.48967085._020645.pool.root.1
[2026-03-15 03:49:16] -rw-r--r--. 1 boinc boinc       529 Mar 15 03:48 boinc_task_state.xml
[2026-03-15 03:49:16] -rw-------. 1 boinc boinc      1031 Mar 15 03:48 memory_monitor_summary.json
[2026-03-15 03:49:16] -rw-------. 1 boinc boinc    283462 Mar 15 03:48 log.48967085._020645.job.log.tgz.1
[2026-03-15 03:49:16] -rw-------. 1 boinc boinc      6357 Mar 15 03:48 heartbeat.json
[2026-03-15 03:49:16] -rw-------. 1 boinc boinc        95 Mar 15 03:49 pilot_heartbeat.json
[2026-03-15 03:49:16] -rw-r--r--. 1 boinc boinc      8192 Mar 15 03:49 boinc_mmap_file
[2026-03-15 03:49:16] -rw-r--r--. 1 boinc boinc        27 Mar 15 03:49 wrapper_checkpoint.txt
[2026-03-15 03:49:16] -rw-------. 1 boinc boinc      4901 Mar 15 03:49 pilotlog.txt
[2026-03-15 03:49:16] -rw-------. 1 boinc boinc    870607 Mar 15 03:49 log.48967085._020645.job.log.1
[2026-03-15 03:49:16] -rw-------. 1 boinc boinc       357 Mar 15 03:49 output.list
[2026-03-15 03:49:16] -rw-r--r--. 1 boinc boinc       620 Mar 15 03:49 runtime_log
[2026-03-15 03:49:16] -rw-------. 1 boinc boinc   1167360 Mar 15 03:49 result.tar.gz
[2026-03-15 03:49:16] -rw-r--r--. 1 boinc boinc      9221 Mar 15 03:49 runtime_log.err
[2026-03-15 03:49:16] -rw-------. 1 boinc boinc       663 Mar 15 03:49 lygKDmzLGL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm9RpLDmyfgXvm.diag
[2026-03-15 03:49:16] -rw-r--r--. 1 boinc boinc     21085 Mar 15 03:49 stderr.txt
[2026-03-15 03:49:16] HITS file was successfully produced:
[2026-03-15 03:49:16] -rw-------. 1 boinc boinc 202682932 Mar 15 03:48 shared/HITS.pool.root.1
[2026-03-15 03:49:16]  *** Contents of shared directory: ***
[2026-03-15 03:49:16] total 406804
[2026-03-15 03:49:16] -rw-r--r--. 2 boinc boinc 212069763 Mar 15 02:07 ATLAS.root_0
[2026-03-15 03:49:16] -rw-r--r--. 2 boinc boinc     15845 Mar 15 02:07 start_atlas.sh
[2026-03-15 03:49:16] -rw-r--r--. 2 boinc boinc    616295 Mar 15 02:07 input.tar.gz
[2026-03-15 03:49:16] -rw-------. 1 boinc boinc 202682932 Mar 15 03:48 HITS.pool.root.1
[2026-03-15 03:49:16] -rw-------. 1 boinc boinc   1167360 Mar 15 03:49 result.tar.gz
03:49:17 (341409): run_atlas exited; CPU time 23301.666495
03:49:17 (341409): called boinc_finish(0)

</stderr_txt>
]]>

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