Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
11:30:28 (1204273): wrapper (7.7.26015): starting
11:30:28 (1204273): wrapper: running run_atlas (--nthreads 12)
[2026-03-13 11:30:28] Arguments: --nthreads 12
[2026-03-13 11:30:28] Threads: 12
[2026-03-13 11:30:28] Checking for CVMFS
[2026-03-13 11:30:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 11:30:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 11:30:28] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 11:30:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 11:30:28] 2.13.2.0 2431 7250 54168 157247 2 50 14233699 16777217 916 130560 1 11858571 99.995 272067 130 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2026-03-13 11:30:28] CVMFS is ok
[2026-03-13 11:30:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 11:30:28] Checking for apptainer binary...
[2026-03-13 11:30:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 11:30:28] Running /usr/bin/apptainer --version
[2026-03-13 11:30:28] apptainer version 1.3.0-bp160.1.36
[2026-03-13 11:30:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 11:30:28] boinc-runner
[2026-03-13 11:30:28] apptainer works
[2026-03-13 11:30:28] Set ATHENA_PROC_NUMBER=12
[2026-03-13 11:30:28] Set ATHENA_CORE_NUMBER=12
[2026-03-13 11:30:28] Starting ATLAS job with PandaID=7043880717
[2026-03-13 11:30:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 11:56:54]  *** The last 200 lines of the pilot log: ***
[2026-03-13 11:56:54]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-13 11:56:54]  is_altstaged=None
[2026-03-13 11:56:54]  is_tar=False
[2026-03-13 11:56:54]  lfn=log.48955010._029443.job.log.tgz.1
[2026-03-13 11:56:54]  mtime=0
[2026-03-13 11:56:54]  protocol_id=None
[2026-03-13 11:56:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-13 11:56:54]  replicas=None
[2026-03-13 11:56:54]  scope=mc23_13p6TeV
[2026-03-13 11:56:54]  status=None
[2026-03-13 11:56:54]  status_code=0
[2026-03-13 11:56:54]  storage_token=
[2026-03-13 11:56:54]  surl=/var/lib/boinc/slots/3/PanDA_Pilot-7043880717/log.48955010._029443.job.log.tgz.1
[2026-03-13 11:56:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/34/f7/log.48955010._029443.job.log.tgz.1
[2026-03-13 11:56:54]  workdir=None
[2026-03-13 11:56:54] ]
[2026-03-13 11:56:54] 2026-03-13 16:56:16,073 | INFO     | transferring file log.48955010._029443.job.log.tgz.1 from /var/lib/boinc/slots/3/PanDA_Pilot-7043880717/log.48955010._029443.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-03-13 11:56:54] 2026-03-13 16:56:16,073 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/3/PanDA_Pilot-7043880717/log.48955010._029443.job.log.tgz.1 /var/lib/boinc/slots/3/log.48955010._029443.job
[2026-03-13 11:56:54] 2026-03-13 16:56:16,080 | INFO     | adding to output.list: log.48955010._029443.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/34/f7/log.48955010._029443.job.log.tg
[2026-03-13 11:56:54] 2026-03-13 16:56:16,080 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-13 11:56:54] 2026-03-13 16:56:16,080 | INFO     | summary of transferred files:
[2026-03-13 11:56:54] 2026-03-13 16:56:16,080 | INFO     |  -- lfn=log.48955010._029443.job.log.tgz.1, status_code=0, status=transferred
[2026-03-13 11:56:54] 2026-03-13 16:56:16,080 | INFO     | stage-out finished correctly
[2026-03-13 11:56:54] 2026-03-13 16:56:16,104 | INFO     | time since job start (1531s) is within the limit (345600.0s)
[2026-03-13 11:56:54] 2026-03-13 16:56:16,209 | INFO     | monitor loop #121: job 0:7043880717 is in state 'finished'
[2026-03-13 11:56:54] 2026-03-13 16:56:16,209 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-13 11:56:54] 2026-03-13 16:56:18,109 | INFO     | time since job start (1533s) is within the limit (345600.0s)
[2026-03-13 11:56:54] 2026-03-13 16:56:18,711 | INFO     | monitor loop #122: job 0:7043880717 is in state 'finished'
[2026-03-13 11:56:54] 2026-03-13 16:56:18,712 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-13 11:56:54] 2026-03-13 16:56:18,744 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-13 11:56:54] 2026-03-13 16:56:18,768 | INFO     | job 7043880717 has state=finished
[2026-03-13 11:56:54] 2026-03-13 16:56:18,768 | INFO     | preparing for final server update for job 7043880717 in state='finished'
[2026-03-13 11:56:54] 2026-03-13 16:56:18,768 | INFO     | reading metadata from: /var/lib/boinc/slots/3/PanDA_Pilot-7043880717/jobReport.json
[2026-03-13 11:56:54] 2026-03-13 16:56:18,769 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/3/workernode_map.json
[2026-03-13 11:56:54] 2026-03-13 16:56:18,769 | INFO     | this job has now completed (state=finished)
[2026-03-13 11:56:54] 2026-03-13 16:56:18,769 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-13 11:56:54] 2026-03-13 16:56:18,769 | INFO     | log transfer has been attempted: DONE
[2026-03-13 11:56:54] 2026-03-13 16:56:18,769 | INFO     | job 7043880717 has finished - writing final server update
[2026-03-13 11:56:54] 2026-03-13 16:56:18,769 | INFO     | total number of processed events: 400 (read)
[2026-03-13 11:56:54] 2026-03-13 16:56:18,771 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-7043880717/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 11:56:54] 2026-03-13 16:56:18,772 | INFO     | extracted standard info from prmon json
[2026-03-13 11:56:54] 2026-03-13 16:56:18,772 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 11:56:54] 2026-03-13 16:56:18,772 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 11:56:54] 2026-03-13 16:56:18,772 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 11:56:54] 2026-03-13 16:56:18,772 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 11:56:54] 2026-03-13 16:56:18,772 | INFO     | fitting pss+swap vs Time
[2026-03-13 11:56:54] 2026-03-13 16:56:18,772 | INFO     | sum of square deviations: 1802824.5
[2026-03-13 11:56:54] 2026-03-13 16:56:18,772 | INFO     | sum of deviations: -181612341.49999997
[2026-03-13 11:56:54] 2026-03-13 16:56:18,772 | INFO     | mean x: 1773420286.5
[2026-03-13 11:56:54] 2026-03-13 16:56:18,772 | INFO     | mean y: 2885384.9444444445
[2026-03-13 11:56:54] 2026-03-13 16:56:18,772 | INFO     | intersect: 178653114896.94952
[2026-03-13 11:56:54] 2026-03-13 16:56:18,772 | INFO     | chi2: 0.0069371526155006386
[2026-03-13 11:56:54] 2026-03-13 16:56:18,772 | INFO     | current memory leak: -100.74 B/s (using 18 data points, chi2=0.01)
[2026-03-13 11:56:54] 2026-03-13 16:56:18,773 | INFO     | could have reported an average CPU frequency of 4234 MHz (4 samples)
[2026-03-13 11:56:54] 2026-03-13 16:56:18,773 | INFO     | ..............................
[2026-03-13 11:56:54] 2026-03-13 16:56:18,773 | INFO     | . Timing measurements:
[2026-03-13 11:56:54] 2026-03-13 16:56:18,773 | INFO     | . get job = 0 s
[2026-03-13 11:56:54] 2026-03-13 16:56:18,773 | INFO     | . initial setup = 6 s
[2026-03-13 11:56:54] 2026-03-13 16:56:18,773 | INFO     | . payload setup = 3 s
[2026-03-13 11:56:54] 2026-03-13 16:56:18,773 | INFO     | . stage-in = 0 s
[2026-03-13 11:56:54] 2026-03-13 16:56:18,773 | INFO     | . payload execution = 1512 s
[2026-03-13 11:56:54] 2026-03-13 16:56:18,773 | INFO     | . stage-out = 0 s
[2026-03-13 11:56:54] 2026-03-13 16:56:18,773 | INFO     | . log creation = 0 s
[2026-03-13 11:56:54] 2026-03-13 16:56:18,773 | INFO     | ..............................
[2026-03-13 11:56:54] 2026-03-13 16:56:18,797 | INFO     | 
[2026-03-13 11:56:54] 2026-03-13 16:56:18,798 | INFO     | job summary report
[2026-03-13 11:56:54] 2026-03-13 16:56:18,798 | INFO     | --------------------------------------------------
[2026-03-13 11:56:54] 2026-03-13 16:56:18,798 | INFO     | PanDA job id: 7043880717
[2026-03-13 11:56:54] 2026-03-13 16:56:18,798 | INFO     | task id: 48955010
[2026-03-13 11:56:54] 2026-03-13 16:56:18,798 | INFO     | errors: (none)
[2026-03-13 11:56:54] 2026-03-13 16:56:18,798 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 11:56:54] 2026-03-13 16:56:18,798 | INFO     | pilot state: finished 
[2026-03-13 11:56:54] 2026-03-13 16:56:18,798 | INFO     | transexitcode: 0
[2026-03-13 11:56:54] 2026-03-13 16:56:18,798 | INFO     | exeerrorcode: 0
[2026-03-13 11:56:54] 2026-03-13 16:56:18,798 | INFO     | exeerrordiag: 
[2026-03-13 11:56:54] 2026-03-13 16:56:18,798 | INFO     | exitcode: 0
[2026-03-13 11:56:54] 2026-03-13 16:56:18,798 | INFO     | exitmsg: OK
[2026-03-13 11:56:54] 2026-03-13 16:56:18,798 | INFO     | cpuconsumptiontime: 15649 s
[2026-03-13 11:56:54] 2026-03-13 16:56:18,798 | INFO     | nevents: 400
[2026-03-13 11:56:54] 2026-03-13 16:56:18,798 | INFO     | neventsw: 0
[2026-03-13 11:56:54] 2026-03-13 16:56:18,798 | INFO     | pid: 1213080
[2026-03-13 11:56:54] 2026-03-13 16:56:18,798 | INFO     | pgrp: 1213080
[2026-03-13 11:56:54] 2026-03-13 16:56:18,798 | INFO     | corecount: 12
[2026-03-13 11:56:54] 2026-03-13 16:56:18,798 | INFO     | event service: False
[2026-03-13 11:56:54] 2026-03-13 16:56:18,798 | INFO     | sizes: {0: 2280177, 10: 2280177, 1520: 2314003, 1523: 2314197}
[2026-03-13 11:56:54] 2026-03-13 16:56:18,798 | INFO     | --------------------------------------------------
[2026-03-13 11:56:54] 2026-03-13 16:56:18,798 | INFO     | 
[2026-03-13 11:56:54] 2026-03-13 16:56:18,798 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-03-13 11:56:54] 2026-03-13 16:56:18,807 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 11:56:54] 2026-03-13 16:56:18,807 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 11:56:54] 2026-03-13 16:56:18,807 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 11:56:54] 2026-03-13 16:56:18,807 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 11:56:54] 2026-03-13 16:56:18,807 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 11:56:54] 2026-03-13 16:56:18,807 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 11:56:54] 2026-03-13 16:56:18,807 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 11:56:54] 2026-03-13 16:56:18,807 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 11:56:54] 2026-03-13 16:56:18,807 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 11:56:54] 2026-03-13 16:56:18,807 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 11:56:54] 2026-03-13 16:56:18,807 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 11:56:54] 2026-03-13 16:56:18,807 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 11:56:54] 2026-03-13 16:56:18,807 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 11:56:54] 2026-03-13 16:56:18,807 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 11:56:54] 2026-03-13 16:56:18,807 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 11:56:54] 2026-03-13 16:56:18,807 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 11:56:54] 2026-03-13 16:56:18,807 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 11:56:54] 2026-03-13 16:56:18,807 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 11:56:54] 2026-03-13 16:56:18,807 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 11:56:54] 2026-03-13 16:56:18,807 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 11:56:54] 2026-03-13 16:56:18,807 | INFO     | job 7043880717 has completed (purged errors)
[2026-03-13 11:56:54] 2026-03-13 16:56:18,807 | INFO     | overall cleanup function is called
[2026-03-13 11:56:54] 2026-03-13 16:56:19,814 | INFO     | --- collectZombieJob: --- 10, [1213080]
[2026-03-13 11:56:54] 2026-03-13 16:56:19,814 | INFO     | zombie collector waiting for pid 1213080
[2026-03-13 11:56:54] 2026-03-13 16:56:19,814 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 11:56:54] 2026-03-13 16:56:19,814 | INFO     | collected zombie processes
[2026-03-13 11:56:54] 2026-03-13 16:56:19,814 | INFO     | will attempt to kill all subprocesses of pid=1213080
[2026-03-13 11:56:54] 2026-03-13 16:56:19,857 | INFO     | process IDs to be killed: [1213080] (in reverse order)
[2026-03-13 11:56:54] 2026-03-13 16:56:19,879 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 11:56:54] 2026-03-13 16:56:19,880 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 11:56:54] 2026-03-13 16:56:19,881 | INFO     | did not find any defunct processes belonging to 1213080
[2026-03-13 11:56:54] 2026-03-13 16:56:19,883 | INFO     | did not find any defunct processes belonging to 1213080
[2026-03-13 11:56:54] 2026-03-13 16:56:19,883 | INFO     | ready for new job
[2026-03-13 11:56:54] 2026-03-13 16:56:19,883 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 11:56:54] 2026-03-13 16:56:19,884 | INFO     | **************************************
[2026-03-13 11:56:54] 2026-03-13 16:56:19,884 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 11:56:54] 2026-03-13 16:56:19,884 | INFO     | **************************************
[2026-03-13 11:56:54] 2026-03-13 16:56:19,884 | INFO     | 
[2026-03-13 11:56:54] 2026-03-13 16:56:19,885 | INFO     | architecture information:
[2026-03-13 11:56:54] 2026-03-13 16:56:19,885 | INFO     | executing command: cat /etc/os-release
[2026-03-13 11:56:54] 2026-03-13 16:56:19,889 | INFO     | cat /etc/os-release:
[2026-03-13 11:56:54] NAME="CentOS Linux"
[2026-03-13 11:56:54] VERSION="7 (Core)"
[2026-03-13 11:56:54] ID="centos"
[2026-03-13 11:56:54] ID_LIKE="rhel fedora"
[2026-03-13 11:56:54] VERSION_ID="7"
[2026-03-13 11:56:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 11:56:54] ANSI_COLOR="0;31"
[2026-03-13 11:56:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 11:56:54] HOME_URL="https://www.centos.org/"
[2026-03-13 11:56:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 11:56:54] 
[2026-03-13 11:56:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 11:56:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 11:56:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 11:56:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 11:56:54] 
[2026-03-13 11:56:54] 2026-03-13 16:56:19,889 | INFO     | **************************************
[2026-03-13 11:56:54] 2026-03-13 16:56:20,392 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-03-13 11:56:54] 2026-03-13 16:56:20,397 | INFO     | sufficient remaining disk space (3860279066624 B)
[2026-03-13 11:56:54] 2026-03-13 16:56:20,398 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 11:56:54] 2026-03-13 16:56:20,398 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 11:56:54] 2026-03-13 16:56:20,398 | INFO     | update_server=False
[2026-03-13 11:56:54] 2026-03-13 16:56:20,398 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 11:56:54] 2026-03-13 16:56:20,398 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 11:56:54] 2026-03-13 16:56:20,398 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 11:56:54] 2026-03-13 16:56:20,398 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 11:56:54] 2026-03-13 16:56:20,398 | INFO     | aborting loop
[2026-03-13 11:56:54] 2026-03-13 16:56:20,673 | INFO     | all data control threads have been joined
[2026-03-13 11:56:54] 2026-03-13 16:56:21,142 | INFO     | all payload control threads have been joined
[2026-03-13 11:56:54] 2026-03-13 16:56:21,401 | INFO     | [job] job monitor thread has finished
[2026-03-13 11:56:54] 2026-03-13 16:56:21,403 | INFO     | [job] retrieve thread has finished
[2026-03-13 11:56:54] 2026-03-13 16:56:21,403 | INFO     | [job] queue monitor thread has finished
[2026-03-13 11:56:54] 2026-03-13 16:56:21,509 | INFO     | all job control threads have been joined
[2026-03-13 11:56:54] 2026-03-13 16:56:21,532 | INFO     | [payload] validate_post thread has finished
[2026-03-13 11:56:54] 2026-03-13 16:56:21,612 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 11:56:54] 2026-03-13 16:56:21,678 | INFO     | [data] control thread has finished
[2026-03-13 11:56:54] 2026-03-13 16:56:22,014 | INFO     | [payload] failed_post thread has finished
[2026-03-13 11:56:54] 2026-03-13 16:56:22,147 | INFO     | [payload] control thread has finished
[2026-03-13 11:56:54] 2026-03-13 16:56:22,336 | INFO     | [job] validate thread has finished
[2026-03-13 11:56:54] 2026-03-13 16:56:22,514 | INFO     | [job] control thread has finished
[2026-03-13 11:56:54] 2026-03-13 16:56:22,527 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 11:56:54] 2026-03-13 16:56:22,580 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 11:56:54] 2026-03-13 16:56:22,651 | INFO     | [data] copytool_in thread has finished
[2026-03-13 11:56:54] 2026-03-13 16:56:22,712 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 11:56:54] 2026-03-13 16:56:23,617 | INFO     | [data] copytool_out thread has finished
[2026-03-13 11:56:54] 2026-03-13 16:56:24,402 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 11:56:54] 2026-03-13 16:56:30,541 | INFO     | job.realtimelogging is not enabled
[2026-03-13 11:56:54] 2026-03-13 16:56:31,547 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 11:56:54] 2026-03-13 16:56:47,448 | INFO     | [monitor] cgroup control has ended
[2026-03-13 11:56:54] 2026-03-13 16:56:49,401 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140423025030976)>', '<ExcThread(monitor, started 140422370273024)>']
[2026-03-13 11:56:54] 2026-03-13 16:56:51,229 | INFO     | PID=1208248 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-13 11:56:54] 2026-03-13 16:56:51,229 | INFO     | .. there are 2 such processes running
[2026-03-13 11:56:54] 2026-03-13 16:56:51,229 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 11:56:54] 2026-03-13 16:56:51,229 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 11:56:54] 2026-03-13 16:56:51,230 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 11:56:54] 2026-03-13 16:56:51,230 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 11:56:54] 2026-03-13 16:56:51,230 | INFO     | [monitor] control thread has ended
[2026-03-13 11:56:54] 2026-03-13 16:56:54,411 | INFO     | all workflow threads have been joined
[2026-03-13 11:56:54] 2026-03-13 16:56:54,411 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 11:56:54] 2026-03-13 16:56:54,411 | INFO     | traces error code: 0
[2026-03-13 11:56:54] 2026-03-13 16:56:54,411 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 11:56:54] 2026-03-13 16:56:54,451 [wrapper] ==== pilot stdout END ====
[2026-03-13 11:56:54] 2026-03-13 16:56:54,452 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 11:56:54] 2026-03-13 16:56:54,453 [wrapper] pilotpid: 1208248
[2026-03-13 11:56:54] 2026-03-13 16:56:54,453 [wrapper] Pilot exit status: 0
[2026-03-13 11:56:54] 2026-03-13 16:56:54,457 [wrapper] pandaids: 7043880717
[2026-03-13 11:56:54] 2026-03-13 16:56:54,472 [wrapper] cleanup supervisor_pilot 1241543 1208249
[2026-03-13 11:56:54] 2026-03-13 16:56:54,473 [wrapper] Test setup, not cleaning
[2026-03-13 11:56:54] 2026-03-13 16:56:54,474 [wrapper] apfmon messages muted
[2026-03-13 11:56:54] 2026-03-13 16:56:54,474 [wrapper] ==== wrapper stdout END ====
[2026-03-13 11:56:54] 2026-03-13 16:56:54,475 [wrapper] ==== wrapper stderr END ====
[2026-03-13 11:56:54]  *** Error codes and diagnostics ***
[2026-03-13 11:56:54]     "exeErrorCode": 0,
[2026-03-13 11:56:54]     "exeErrorDiag": "",
[2026-03-13 11:56:54]     "pilotErrorCode": 0,
[2026-03-13 11:56:54]     "pilotErrorDiag": "",
[2026-03-13 11:56:54]  *** Listing of results directory ***
[2026-03-13 11:56:54] total 610932
[2026-03-13 11:56:54] -rw-r--r--. 1 boinc boinc    585013 Mar 13 03:44 pilot3.tar.gz
[2026-03-13 11:56:54] -rw-r--r--. 1 boinc boinc      5111 Mar 13 03:44 queuedata.json
[2026-03-13 11:56:54] -rwx------. 1 boinc boinc     36322 Mar 13 03:44 runpilot2-wrapper.sh
[2026-03-13 11:56:54] -rw-r--r--. 1 boinc boinc       100 Mar 13 11:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 11:56:54] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 11:30 run_atlas
[2026-03-13 11:56:54] -rw-r--r--. 1 boinc boinc       105 Mar 13 11:30 job.xml
[2026-03-13 11:56:54] -rw-r--r--. 2 boinc boinc 437574166 Mar 13 11:30 EVNT.46701403._001583.pool.root.1
[2026-03-13 11:56:54] -rw-r--r--. 2 boinc boinc     15845 Mar 13 11:30 start_atlas.sh
[2026-03-13 11:56:54] drwxrwx--x. 1 boinc boinc        76 Mar 13 11:30 shared
[2026-03-13 11:56:54] -rw-r--r--. 2 boinc boinc    597527 Mar 13 11:30 input.tar.gz
[2026-03-13 11:56:54] -rw-r--r--. 1 boinc boinc     10051 Mar 13 11:30 init_data.xml
[2026-03-13 11:56:54] -rw-r--r--. 1 boinc boinc         0 Mar 13 11:30 boinc_setup_complete
[2026-03-13 11:56:54] -rw-r--r--. 1 boinc boinc         0 Mar 13 11:30 boinc_lockfile
[2026-03-13 11:56:54] -rw-r--r--. 1 boinc boinc      2562 Mar 13 11:30 pandaJob.out
[2026-03-13 11:56:54] -rw-------. 1 boinc boinc        63 Mar 13 11:30 setup.sh.local
[2026-03-13 11:56:54] -rw-------. 1 boinc boinc   1006597 Mar 13 11:30 agis_schedconf.cvmfs.json
[2026-03-13 11:56:54] -rw-------. 1 boinc boinc   1511579 Mar 13 11:30 agis_ddmendpoints.agis.ALL.json
[2026-03-13 11:56:54] -rw-------. 1 boinc boinc       427 Mar 13 11:30 workernode_map.json
[2026-03-13 11:56:54] drwx------. 1 boinc boinc       414 Mar 13 11:30 pilot3
[2026-03-13 11:56:54] -rw-------. 1 boinc boinc 182910022 Mar 13 11:55 HITS.48955010._029443.pool.root.1
[2026-03-13 11:56:54] -rw-r--r--. 1 boinc boinc       530 Mar 13 11:56 boinc_task_state.xml
[2026-03-13 11:56:54] -rw-------. 1 boinc boinc      1027 Mar 13 11:56 memory_monitor_summary.json
[2026-03-13 11:56:54] -rw-------. 1 boinc boinc    326400 Mar 13 11:56 log.48955010._029443.job.log.tgz.1
[2026-03-13 11:56:54] -rw-------. 1 boinc boinc      6344 Mar 13 11:56 heartbeat.json
[2026-03-13 11:56:54] -rw-r--r--. 1 boinc boinc      8192 Mar 13 11:56 boinc_mmap_file
[2026-03-13 11:56:54] -rw-r--r--. 1 boinc boinc        27 Mar 13 11:56 wrapper_checkpoint.txt
[2026-03-13 11:56:54] -rw-------. 1 boinc boinc        95 Mar 13 11:56 pilot_heartbeat.json
[2026-03-13 11:56:54] -rw-------. 1 boinc boinc      4893 Mar 13 11:56 pilotlog.txt
[2026-03-13 11:56:54] -rw-------. 1 boinc boinc    265431 Mar 13 11:56 log.48955010._029443.job.log.1
[2026-03-13 11:56:54] -rw-------. 1 boinc boinc       357 Mar 13 11:56 output.list
[2026-03-13 11:56:54] -rw-r--r--. 1 boinc boinc       620 Mar 13 11:56 runtime_log
[2026-03-13 11:56:54] -rw-------. 1 boinc boinc    614400 Mar 13 11:56 result.tar.gz
[2026-03-13 11:56:54] -rw-------. 1 boinc boinc       650 Mar 13 11:56 uElMDmPJDL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmtUmLDmO7v1wm.diag
[2026-03-13 11:56:54] -rw-r--r--. 1 boinc boinc      9395 Mar 13 11:56 runtime_log.err
[2026-03-13 11:56:54] -rw-r--r--. 1 boinc boinc     21089 Mar 13 11:56 stderr.txt
[2026-03-13 11:56:54] HITS file was successfully produced:
[2026-03-13 11:56:54] -rw-------. 1 boinc boinc 182910022 Mar 13 11:55 shared/HITS.pool.root.1
[2026-03-13 11:56:54]  *** Contents of shared directory: ***
[2026-03-13 11:56:54] total 607144
[2026-03-13 11:56:54] -rw-r--r--. 2 boinc boinc 437574166 Mar 13 11:30 ATLAS.root_0
[2026-03-13 11:56:54] -rw-r--r--. 2 boinc boinc     15845 Mar 13 11:30 start_atlas.sh
[2026-03-13 11:56:54] -rw-r--r--. 2 boinc boinc    597527 Mar 13 11:30 input.tar.gz
[2026-03-13 11:56:54] -rw-------. 1 boinc boinc 182910022 Mar 13 11:55 HITS.pool.root.1
[2026-03-13 11:56:54] -rw-------. 1 boinc boinc    614400 Mar 13 11:56 result.tar.gz
11:56:55 (1204273): run_atlas exited; CPU time 15657.692889
11:56:55 (1204273): called boinc_finish(0)

</stderr_txt>
]]>

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