Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:18:17 (515979): wrapper (7.7.26015): starting
09:18:17 (515979): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 09:18:17] Arguments: --nthreads 4
[2026-03-15 09:18:17] Threads: 4
[2026-03-15 09:18:17] Checking for CVMFS
[2026-03-15 09:18:17] No cvmfs_config command found, will try listing directly
[2026-03-15 09:18:17] CVMFS is ok
[2026-03-15 09:18:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 09:18:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 09:18:17] Further information can be found at the LHC@home message board.
[2026-03-15 09:18:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 09:18:17] Checking for apptainer binary...
[2026-03-15 09:18:17] which: no apptainer in ((null))
[2026-03-15 09:18:17] apptainer is not installed, using version from CVMFS
[2026-03-15 09:18:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 09:18:17] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot76/slots/6/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-15 09:18:17] apptainer works
[2026-03-15 09:18:17] Set ATHENA_PROC_NUMBER=4
[2026-03-15 09:18:17] Set ATHENA_CORE_NUMBER=4
[2026-03-15 09:18:17] Starting ATLAS job with PandaID=7043921584
[2026-03-15 09:18:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot76/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 10:39:43]  *** The last 200 lines of the pilot log: ***
[2026-03-15 10:39:43]  guid=c7753dba-070d-4e13-9ca1-e0d4ba3ddd3a
[2026-03-15 10:39:43]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-15 10:39:43]  is_altstaged=None
[2026-03-15 10:39:43]  is_tar=False
[2026-03-15 10:39:43]  lfn=log.48955015._015164.job.log.tgz.1
[2026-03-15 10:39:43]  mtime=0
[2026-03-15 10:39:43]  protocol_id=None
[2026-03-15 10:39:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-15 10:39:43]  replicas=None
[2026-03-15 10:39:43]  scope=mc23_13p6TeV
[2026-03-15 10:39:43]  status=None
[2026-03-15 10:39:43]  status_code=0
[2026-03-15 10:39:43]  storage_token=
[2026-03-15 10:39:43]  surl=/var/lib/boinc/var/slot76/slots/6/PanDA_Pilot-7043921584/log.48955015._015164.job.log.tgz.1
[2026-03-15 10:39:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8b/88/log.48955015._015164.job.log.tgz.1
[2026-03-15 10:39:43]  workdir=None
[2026-03-15 10:39:43] ]
[2026-03-15 10:39:43] 2026-03-15 09:38:49,304 | INFO     | transferring file log.48955015._015164.job.log.tgz.1 from /var/lib/boinc/var/slot76/slots/6/PanDA_Pilot-7043921584/log.48955015._015164.job.log.tgz.1 to /var/lib/b
[2026-03-15 10:39:43] 2026-03-15 09:38:49,305 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot76/slots/6/PanDA_Pilot-7043921584/log.48955015._015164.job.log.tgz.1 /var/lib/boinc/var/slot76/slots/6/lo
[2026-03-15 10:39:43] 2026-03-15 09:38:49,322 | INFO     | adding to output.list: log.48955015._015164.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8b/88/log.48955015._015164.job.log.tg
[2026-03-15 10:39:43] 2026-03-15 09:38:49,323 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-15 10:39:43] 2026-03-15 09:38:49,323 | INFO     | summary of transferred files:
[2026-03-15 10:39:43] 2026-03-15 09:38:49,323 | INFO     |  -- lfn=log.48955015._015164.job.log.tgz.1, status_code=0, status=transferred
[2026-03-15 10:39:43] 2026-03-15 09:38:49,323 | INFO     | stage-out finished correctly
[2026-03-15 10:39:43] 2026-03-15 09:38:49,881 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-15 10:39:43] 2026-03-15 09:38:50,644 | INFO     | job 7043921584 has state=finished
[2026-03-15 10:39:43] 2026-03-15 09:38:50,644 | INFO     | preparing for final server update for job 7043921584 in state='finished'
[2026-03-15 10:39:43] 2026-03-15 09:38:50,646 | INFO     | time since job start (4820s) is within the limit (345600.0s)
[2026-03-15 10:39:43] 2026-03-15 09:38:50,831 | INFO     | monitor loop #347: job 0:7043921584 is in state 'finished'
[2026-03-15 10:39:43] 2026-03-15 09:38:50,831 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-15 10:39:43] 2026-03-15 09:38:51,198 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-15 10:39:43] 2026-03-15 09:38:51,198 | INFO     | reading metadata from: /var/lib/boinc/var/slot76/slots/6/PanDA_Pilot-7043921584/jobReport.json
[2026-03-15 10:39:43] 2026-03-15 09:38:51,200 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot76/slots/6/workernode_map.json
[2026-03-15 10:39:43] 2026-03-15 09:38:51,200 | INFO     | this job has now completed (state=finished)
[2026-03-15 10:39:43] 2026-03-15 09:38:51,200 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 10:39:43] 2026-03-15 09:38:51,200 | INFO     | log transfer has been attempted: DONE
[2026-03-15 10:39:43] 2026-03-15 09:38:51,200 | INFO     | job 7043921584 has finished - writing final server update
[2026-03-15 10:39:43] 2026-03-15 09:38:51,201 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1478123/.job.ad'
[2026-03-15 10:39:43] 2026-03-15 09:38:51,201 | INFO     | total number of processed events: 400 (read)
[2026-03-15 10:39:43] 2026-03-15 09:38:51,218 | INFO     | using path: /var/lib/boinc/var/slot76/slots/6/PanDA_Pilot-7043921584/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 10:39:43] 2026-03-15 09:38:51,219 | INFO     | extracted standard info from prmon json
[2026-03-15 10:39:43] 2026-03-15 09:38:51,219 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 10:39:43] 2026-03-15 09:38:51,219 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 10:39:43] 2026-03-15 09:38:51,219 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 10:39:43] 2026-03-15 09:38:51,219 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 10:39:43] 2026-03-15 09:38:51,221 | INFO     | fitting pss+swap vs Time
[2026-03-15 10:39:43] 2026-03-15 09:38:51,221 | INFO     | sum of square deviations: 115715658.0
[2026-03-15 10:39:43] 2026-03-15 09:38:51,221 | INFO     | sum of deviations: -445435450.50000006
[2026-03-15 10:39:43] 2026-03-15 09:38:51,221 | INFO     | mean x: 1773565201.5
[2026-03-15 10:39:43] 2026-03-15 09:38:51,221 | INFO     | mean y: 2337747.097222222
[2026-03-15 10:39:43] 2026-03-15 09:38:51,221 | INFO     | intersect: 6829493450.790113
[2026-03-15 10:39:43] 2026-03-15 09:38:51,221 | INFO     | chi2: 0.0002265291073862771
[2026-03-15 10:39:43] 2026-03-15 09:38:51,222 | INFO     | current memory leak: -3.85 B/s (using 72 data points, chi2=0.00)
[2026-03-15 10:39:43] 2026-03-15 09:38:51,222 | INFO     | could have reported an average CPU frequency of 3585 MHz (6 samples)
[2026-03-15 10:39:43] 2026-03-15 09:38:51,222 | INFO     | ..............................
[2026-03-15 10:39:43] 2026-03-15 09:38:51,222 | INFO     | . Timing measurements:
[2026-03-15 10:39:43] 2026-03-15 09:38:51,222 | INFO     | . get job = 0 s
[2026-03-15 10:39:43] 2026-03-15 09:38:51,222 | INFO     | . initial setup = 5 s
[2026-03-15 10:39:43] 2026-03-15 09:38:51,222 | INFO     | . payload setup = 5 s
[2026-03-15 10:39:43] 2026-03-15 09:38:51,222 | INFO     | . stage-in = 0 s
[2026-03-15 10:39:43] 2026-03-15 09:38:51,222 | INFO     | . payload execution = 4799 s
[2026-03-15 10:39:43] 2026-03-15 09:38:51,222 | INFO     | . stage-out = 0 s
[2026-03-15 10:39:43] 2026-03-15 09:38:51,222 | INFO     | . log creation = 0 s
[2026-03-15 10:39:43] 2026-03-15 09:38:51,222 | INFO     | ..............................
[2026-03-15 10:39:43] 2026-03-15 09:38:51,792 | INFO     | 
[2026-03-15 10:39:43] 2026-03-15 09:38:51,793 | INFO     | job summary report
[2026-03-15 10:39:43] 2026-03-15 09:38:51,793 | INFO     | --------------------------------------------------
[2026-03-15 10:39:43] 2026-03-15 09:38:51,793 | INFO     | PanDA job id: 7043921584
[2026-03-15 10:39:43] 2026-03-15 09:38:51,793 | INFO     | task id: 48955015
[2026-03-15 10:39:43] 2026-03-15 09:38:51,793 | INFO     | errors: (none)
[2026-03-15 10:39:43] 2026-03-15 09:38:51,793 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 10:39:43] 2026-03-15 09:38:51,793 | INFO     | pilot state: finished 
[2026-03-15 10:39:43] 2026-03-15 09:38:51,793 | INFO     | transexitcode: 0
[2026-03-15 10:39:43] 2026-03-15 09:38:51,793 | INFO     | exeerrorcode: 0
[2026-03-15 10:39:43] 2026-03-15 09:38:51,793 | INFO     | exeerrordiag: 
[2026-03-15 10:39:43] 2026-03-15 09:38:51,793 | INFO     | exitcode: 0
[2026-03-15 10:39:43] 2026-03-15 09:38:51,793 | INFO     | exitmsg: OK
[2026-03-15 10:39:43] 2026-03-15 09:38:51,793 | INFO     | cpuconsumptiontime: 18288 s
[2026-03-15 10:39:43] 2026-03-15 09:38:51,793 | INFO     | nevents: 400
[2026-03-15 10:39:43] 2026-03-15 09:38:51,793 | INFO     | neventsw: 0
[2026-03-15 10:39:43] 2026-03-15 09:38:51,793 | INFO     | pid: 527006
[2026-03-15 10:39:43] 2026-03-15 09:38:51,793 | INFO     | pgrp: 527006
[2026-03-15 10:39:43] 2026-03-15 09:38:51,793 | INFO     | corecount: 4
[2026-03-15 10:39:43] 2026-03-15 09:38:51,793 | INFO     | event service: False
[2026-03-15 10:39:43] 2026-03-15 09:38:51,793 | INFO     | sizes: {0: 2280247, 11: 2280247, 4807: 2306558, 4808: 2315578, 4809: 2315634, 4810: 2315828}
[2026-03-15 10:39:43] 2026-03-15 09:38:51,793 | INFO     | --------------------------------------------------
[2026-03-15 10:39:43] 2026-03-15 09:38:51,793 | INFO     | 
[2026-03-15 10:39:43] 2026-03-15 09:38:51,793 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot76/slots/6
[2026-03-15 10:39:43] 2026-03-15 09:38:51,812 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 10:39:43] 2026-03-15 09:38:51,812 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 10:39:43] 2026-03-15 09:38:51,812 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 10:39:43] 2026-03-15 09:38:51,812 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 10:39:43] 2026-03-15 09:38:51,812 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 10:39:43] 2026-03-15 09:38:51,812 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 10:39:43] 2026-03-15 09:38:51,812 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 10:39:43] 2026-03-15 09:38:51,813 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 10:39:43] 2026-03-15 09:38:51,813 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 10:39:43] 2026-03-15 09:38:51,813 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 10:39:43] 2026-03-15 09:38:51,813 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 10:39:43] 2026-03-15 09:38:51,813 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 10:39:43] 2026-03-15 09:38:51,813 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 10:39:43] 2026-03-15 09:38:51,813 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 10:39:43] 2026-03-15 09:38:51,813 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 10:39:43] 2026-03-15 09:38:51,813 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 10:39:43] 2026-03-15 09:38:51,813 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 10:39:43] 2026-03-15 09:38:51,813 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 10:39:43] 2026-03-15 09:38:51,813 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 10:39:43] 2026-03-15 09:38:51,813 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 10:39:43] 2026-03-15 09:38:51,813 | INFO     | job 7043921584 has completed (purged errors)
[2026-03-15 10:39:43] 2026-03-15 09:38:51,813 | INFO     | overall cleanup function is called
[2026-03-15 10:39:43] 2026-03-15 09:38:52,820 | INFO     | --- collectZombieJob: --- 10, [527006]
[2026-03-15 10:39:43] 2026-03-15 09:38:52,820 | INFO     | zombie collector waiting for pid 527006
[2026-03-15 10:39:43] 2026-03-15 09:38:52,820 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 10:39:43] 2026-03-15 09:38:52,820 | INFO     | collected zombie processes
[2026-03-15 10:39:43] 2026-03-15 09:38:52,820 | INFO     | will attempt to kill all subprocesses of pid=527006
[2026-03-15 10:39:43] 2026-03-15 09:38:53,310 | INFO     | process IDs to be killed: [527006] (in reverse order)
[2026-03-15 10:39:43] 2026-03-15 09:38:53,530 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 10:39:43] 2026-03-15 09:38:53,530 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 10:39:43] 2026-03-15 09:38:53,560 | INFO     | did not find any defunct processes belonging to 527006
[2026-03-15 10:39:43] 2026-03-15 09:38:53,589 | INFO     | did not find any defunct processes belonging to 527006
[2026-03-15 10:39:43] 2026-03-15 09:38:53,589 | INFO     | ready for new job
[2026-03-15 10:39:43] 2026-03-15 09:38:53,589 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 10:39:43] 2026-03-15 09:38:53,590 | INFO     | **************************************
[2026-03-15 10:39:43] 2026-03-15 09:38:53,590 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 10:39:43] 2026-03-15 09:38:53,590 | INFO     | **************************************
[2026-03-15 10:39:43] 2026-03-15 09:38:53,590 | INFO     | 
[2026-03-15 10:39:43] 2026-03-15 09:38:53,597 | INFO     | architecture information:
[2026-03-15 10:39:43] 2026-03-15 09:38:53,597 | INFO     | executing command: cat /etc/os-release
[2026-03-15 10:39:43] 2026-03-15 09:38:53,614 | INFO     | cat /etc/os-release:
[2026-03-15 10:39:43] NAME="CentOS Linux"
[2026-03-15 10:39:43] VERSION="7 (Core)"
[2026-03-15 10:39:43] ID="centos"
[2026-03-15 10:39:43] ID_LIKE="rhel fedora"
[2026-03-15 10:39:43] VERSION_ID="7"
[2026-03-15 10:39:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 10:39:43] ANSI_COLOR="0;31"
[2026-03-15 10:39:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 10:39:43] HOME_URL="https://www.centos.org/"
[2026-03-15 10:39:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 10:39:43] 
[2026-03-15 10:39:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 10:39:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 10:39:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 10:39:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 10:39:43] 
[2026-03-15 10:39:43] 2026-03-15 09:38:53,614 | INFO     | **************************************
[2026-03-15 10:39:43] 2026-03-15 09:38:54,116 | INFO     | executing command: df -mP /var/lib/boinc/var/slot76/slots/6
[2026-03-15 10:39:43] 2026-03-15 09:38:54,134 | INFO     | sufficient remaining disk space (86803218432 B)
[2026-03-15 10:39:43] 2026-03-15 09:38:54,134 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 10:39:43] 2026-03-15 09:38:54,134 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 10:39:43] 2026-03-15 09:38:54,135 | INFO     | update_server=False
[2026-03-15 10:39:43] 2026-03-15 09:38:54,135 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 10:39:43] 2026-03-15 09:38:54,345 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 10:39:43] 2026-03-15 09:38:54,345 | INFO     | aborting loop
[2026-03-15 10:39:43] 2026-03-15 09:38:54,616 | INFO     | all job control threads have been joined
[2026-03-15 10:39:43] 2026-03-15 09:38:54,884 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 10:39:43] 2026-03-15 09:38:54,986 | INFO     | all payload control threads have been joined
[2026-03-15 10:39:43] 2026-03-15 09:38:55,080 | INFO     | all data control threads have been joined
[2026-03-15 10:39:43] 2026-03-15 09:38:55,140 | INFO     | [job] retrieve thread has finished
[2026-03-15 10:39:43] 2026-03-15 09:38:55,350 | INFO     | [job] job monitor thread has finished
[2026-03-15 10:39:43] 2026-03-15 09:38:55,481 | INFO     | [payload] failed_post thread has finished
[2026-03-15 10:39:43] 2026-03-15 09:38:55,621 | INFO     | [job] control thread has finished
[2026-03-15 10:39:43] 2026-03-15 09:38:55,665 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 10:39:43] 2026-03-15 09:38:55,675 | INFO     | [job] validate thread has finished
[2026-03-15 10:39:43] 2026-03-15 09:38:55,754 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 10:39:43] 2026-03-15 09:38:55,883 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 10:39:43] 2026-03-15 09:38:55,933 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 10:39:43] 2026-03-15 09:38:55,991 | INFO     | [payload] control thread has finished
[2026-03-15 10:39:43] 2026-03-15 09:38:56,085 | INFO     | [data] control thread has finished
[2026-03-15 10:39:43] 2026-03-15 09:38:56,172 | INFO     | [data] copytool_in thread has finished
[2026-03-15 10:39:43] 2026-03-15 09:38:56,197 | INFO     | [payload] validate_post thread has finished
[2026-03-15 10:39:43] 2026-03-15 09:38:56,302 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 10:39:43] 2026-03-15 09:38:56,889 | INFO     | [data] copytool_out thread has finished
[2026-03-15 10:39:43] 2026-03-15 09:38:57,307 | INFO     | [job] queue monitor thread has finished
[2026-03-15 10:39:43] 2026-03-15 09:38:59,938 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 10:39:43] 2026-03-15 09:39:04,344 | INFO     | job.realtimelogging is not enabled
[2026-03-15 10:39:43] 2026-03-15 09:39:05,349 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 10:39:43] 2026-03-15 09:39:24,262 | INFO     | PID=520604 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-15 10:39:43] 2026-03-15 09:39:24,262 | INFO     | .. there are 47 such processes running
[2026-03-15 10:39:43] 2026-03-15 09:39:24,262 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 10:39:43] 2026-03-15 09:39:24,262 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 10:39:43] 2026-03-15 09:39:24,262 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 10:39:43] 2026-03-15 09:39:37,586 | INFO     | [monitor] cgroup control has ended
[2026-03-15 10:39:43] 2026-03-15 09:39:38,159 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23331876067136)>', '<ExcThread(monitor, started 23331631007488)>']
[2026-03-15 10:39:43] 2026-03-15 09:39:38,325 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 10:39:43] 2026-03-15 09:39:38,325 | INFO     | [monitor] control thread has ended
[2026-03-15 10:39:43] 2026-03-15 09:39:43,184 | INFO     | all workflow threads have been joined
[2026-03-15 10:39:43] 2026-03-15 09:39:43,184 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 10:39:43] 2026-03-15 09:39:43,185 | INFO     | traces error code: 0
[2026-03-15 10:39:43] 2026-03-15 09:39:43,185 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 10:39:43] 2026-03-15 09:39:43,336 [wrapper] ==== pilot stdout END ====
[2026-03-15 10:39:43] 2026-03-15 09:39:43,338 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 10:39:43] 2026-03-15 09:39:43,341 [wrapper] pilotpid: 520604
[2026-03-15 10:39:43] 2026-03-15 09:39:43,343 [wrapper] Pilot exit status: 0
[2026-03-15 10:39:43] 2026-03-15 09:39:43,352 [wrapper] pandaids: 7043921584
[2026-03-15 10:39:43] 2026-03-15 09:39:43,483 [wrapper] cleanup supervisor_pilot 1196439 520605
[2026-03-15 10:39:43] 2026-03-15 09:39:43,488 [wrapper] Test setup, not cleaning
[2026-03-15 10:39:43] 2026-03-15 09:39:43,490 [wrapper] apfmon messages muted
[2026-03-15 10:39:43] 2026-03-15 09:39:43,493 [wrapper] ==== wrapper stdout END ====
[2026-03-15 10:39:43] 2026-03-15 09:39:43,496 [wrapper] ==== wrapper stderr END ====
[2026-03-15 10:39:43]  *** Error codes and diagnostics ***
[2026-03-15 10:39:43]     "exeErrorCode": 0,
[2026-03-15 10:39:43]     "exeErrorDiag": "",
[2026-03-15 10:39:43]     "pilotErrorCode": 0,
[2026-03-15 10:39:43]     "pilotErrorDiag": "",
[2026-03-15 10:39:43]  *** Listing of results directory ***
[2026-03-15 10:39:43] total 606112
[2026-03-15 10:39:43] -rw-r--r--. 1 boinc boinc    585013 Mar 13 09:44 pilot3.tar.gz
[2026-03-15 10:39:43] -rwx------. 1 boinc boinc     36322 Mar 13 09:45 runpilot2-wrapper.sh
[2026-03-15 10:39:43] -rw-r--r--. 1 boinc boinc      5111 Mar 13 09:46 queuedata.json
[2026-03-15 10:39:43] -rw-r--r--. 1 boinc boinc       100 Mar 15 09:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 10:39:43] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 09:18 run_atlas
[2026-03-15 10:39:43] -rw-r--r--. 1 boinc boinc       105 Mar 15 09:18 job.xml
[2026-03-15 10:39:43] -rw-r--r--. 1 boinc boinc      6707 Mar 15 09:18 init_data.xml
[2026-03-15 10:39:43] -rw-r--r--. 2 boinc boinc 437032344 Mar 15 09:18 EVNT.46701403._002358.pool.root.1
[2026-03-15 10:39:43] -rw-r--r--. 2 boinc boinc     15845 Mar 15 09:18 start_atlas.sh
[2026-03-15 10:39:43] drwxrwx--x. 2 boinc boinc      4096 Mar 15 09:18 shared
[2026-03-15 10:39:43] -rw-r--r--. 2 boinc boinc    597533 Mar 15 09:18 input.tar.gz
[2026-03-15 10:39:43] -rw-r--r--. 1 boinc boinc         0 Mar 15 09:18 boinc_lockfile
[2026-03-15 10:39:43] -rw-r--r--. 1 boinc boinc      2571 Mar 15 09:18 pandaJob.out
[2026-03-15 10:39:43] -rw-------. 1 boinc boinc   1006481 Mar 15 09:18 agis_schedconf.cvmfs.json
[2026-03-15 10:39:43] -rw-------. 1 boinc boinc   1511579 Mar 15 09:18 agis_ddmendpoints.agis.ALL.json
[2026-03-15 10:39:43] -rw-------. 1 boinc boinc       444 Mar 15 09:18 workernode_map.json
[2026-03-15 10:39:43] drwx------. 5 boinc boinc      4096 Mar 15 09:18 pilot3
[2026-03-15 10:39:43] -rw-------. 1 boinc boinc 177735968 Mar 15 10:38 HITS.48955015._015164.pool.root.1
[2026-03-15 10:39:43] -rw-r--r--. 1 boinc boinc       530 Mar 15 10:38 boinc_task_state.xml
[2026-03-15 10:39:43] -rw-------. 1 boinc boinc      1030 Mar 15 10:38 memory_monitor_summary.json
[2026-03-15 10:39:43] -rw-------. 1 boinc boinc    272704 Mar 15 10:38 log.48955015._015164.job.log.tgz.1
[2026-03-15 10:39:43] -rw-------. 1 boinc boinc        95 Mar 15 10:38 pilot_heartbeat.json
[2026-03-15 10:39:43] -rw-------. 1 boinc boinc      6353 Mar 15 10:38 heartbeat.json
[2026-03-15 10:39:43] -rw-r--r--. 1 boinc boinc        27 Mar 15 10:39 wrapper_checkpoint.txt
[2026-03-15 10:39:43] -rw-r--r--. 1 boinc boinc      8192 Mar 15 10:39 boinc_mmap_file
[2026-03-15 10:39:43] -rw-------. 1 boinc boinc      4900 Mar 15 10:39 pilotlog.txt
[2026-03-15 10:39:43] -rw-------. 1 boinc boinc    704114 Mar 15 10:39 log.48955015._015164.job.log.1
[2026-03-15 10:39:43] -rw-------. 1 boinc boinc       357 Mar 15 10:39 output.list
[2026-03-15 10:39:43] -rw-r--r--. 1 boinc boinc       620 Mar 15 10:39 runtime_log
[2026-03-15 10:39:43] -rw-------. 1 boinc boinc    993280 Mar 15 10:39 result.tar.gz
[2026-03-15 10:39:43] -rw-r--r--. 1 boinc boinc      9204 Mar 15 10:39 runtime_log.err
[2026-03-15 10:39:43] -rw-------. 1 boinc boinc       662 Mar 15 10:39 6W6MDmPKDL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmnXmLDmaQfAOm.diag
[2026-03-15 10:39:43] -rw-r--r--. 1 boinc boinc     21221 Mar 15 10:39 stderr.txt
[2026-03-15 10:39:43] HITS file was successfully produced:
[2026-03-15 10:39:43] -rw-------. 1 boinc boinc 177735968 Mar 15 10:38 shared/HITS.pool.root.1
[2026-03-15 10:39:43]  *** Contents of shared directory: ***
[2026-03-15 10:39:43] total 601944
[2026-03-15 10:39:43] -rw-r--r--. 2 boinc boinc 437032344 Mar 15 09:18 ATLAS.root_0
[2026-03-15 10:39:43] -rw-r--r--. 2 boinc boinc     15845 Mar 15 09:18 start_atlas.sh
[2026-03-15 10:39:43] -rw-r--r--. 2 boinc boinc    597533 Mar 15 09:18 input.tar.gz
[2026-03-15 10:39:43] -rw-------. 1 boinc boinc 177735968 Mar 15 10:38 HITS.pool.root.1
[2026-03-15 10:39:43] -rw-------. 1 boinc boinc    993280 Mar 15 10:39 result.tar.gz
10:39:45 (515979): run_atlas exited; CPU time 18480.177654
10:39:45 (515979): called boinc_finish(0)

</stderr_txt>
]]>

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