Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:08:39 (1642625): wrapper (7.7.26015): starting
04:08:39 (1642625): wrapper: running run_atlas (--nthreads 2)
[2026-03-14 04:08:39] Arguments: --nthreads 2
[2026-03-14 04:08:39] Threads: 2
[2026-03-14 04:08:39] Checking for CVMFS
[2026-03-14 04:08:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 04:08:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 04:08:39] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 04:08:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 04:08:39] 2.9.2.0 12722 16833 62552 157262 2 49 32369463 36864001 0 130560 0 4780285 99.976 624727 6114 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-14 04:08:39] CVMFS is ok
[2026-03-14 04:08:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 04:08:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 04:08:39] Further information can be found at the LHC@home message board.
[2026-03-14 04:08:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 04:08:39] Checking for apptainer binary...
[2026-03-14 04:08:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 04:08:39] Running /usr/bin/apptainer --version
[2026-03-14 04:08:39] apptainer version 1.4.1-1.1
[2026-03-14 04:08:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 04:08:39] thA334a
[2026-03-14 04:08:39] apptainer works
[2026-03-14 04:08:39] Set ATHENA_PROC_NUMBER=2
[2026-03-14 04:08:39] Set ATHENA_CORE_NUMBER=2
[2026-03-14 04:08:39] Starting ATLAS job with PandaID=7044205875
[2026-03-14 04:08:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 06:03:44]  *** The last 200 lines of the pilot log: ***
[2026-03-14 06:03:44] 2026-03-14 05:03:06,979 | INFO     | [data] control thread has finished
[2026-03-14 06:03:44] 2026-03-14 05:03:07,049 | INFO     | job.realtimelogging is not enabled
[2026-03-14 06:03:44] 2026-03-14 05:03:07,080 | INFO     | [payload] control thread has finished
[2026-03-14 06:03:44] 2026-03-14 05:03:07,192 | INFO     | [job] validate thread has finished
[2026-03-14 06:03:44] 2026-03-14 05:03:07,244 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 06:03:44] 2026-03-14 05:03:07,245 | WARNING  | process 1651062 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 06:03:44] 2026-03-14 05:03:07,264 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 06:03:44] 2026-03-14 05:03:07,266 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 06:03:44] 2026-03-14 05:03:07,266 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 06:03:44] 2026-03-14 05:03:07,266 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-14 06:03:44] 2026-03-14 05:03:07,266 | WARNING  | maxPSS not found in memory monitor output
[2026-03-14 06:03:44] 2026-03-14 05:03:07,267 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-7044205875/payload.stdout) since it has not been created yet
[2026-03-14 06:03:44] 2026-03-14 05:03:07,267 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-14 06:03:44] 2026-03-14 05:03:07,276 | INFO     | sufficient remaining disk space (490218717184 B)
[2026-03-14 06:03:44] 2026-03-14 05:03:07,276 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-14 06:03:44] 2026-03-14 05:03:07,277 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-7044205875/HITS.48955015._016018.pool.root.1 since it does not exist
[2026-03-14 06:03:44] 2026-03-14 05:03:07,303 | INFO     | number of running child processes to parent process 1651062: 1
[2026-03-14 06:03:44] 2026-03-14 05:03:07,303 | INFO     | maximum number of monitored processes: 6
[2026-03-14 06:03:44] 2026-03-14 05:03:07,303 | INFO     | aborting job monitoring since job object (job id=7044205875) has expired
[2026-03-14 06:03:44] 2026-03-14 05:03:07,303 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 06:03:44] 2026-03-14 05:03:07,303 | INFO     | will abort loop
[2026-03-14 06:03:44] 2026-03-14 05:03:07,311 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 06:03:44] 2026-03-14 05:03:07,537 | INFO     | [data] copytool_out thread has finished
[2026-03-14 06:03:44] 2026-03-14 05:03:07,577 | INFO     | [data] copytool_in thread has finished
[2026-03-14 06:03:44] 2026-03-14 05:03:07,740 | INFO     | [payload] validate_post thread has finished
[2026-03-14 06:03:44] 2026-03-14 05:03:08,055 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 06:03:44] 2026-03-14 05:03:08,100 | INFO     | [payload] failed_post thread has finished
[2026-03-14 06:03:44] 2026-03-14 05:03:08,308 | INFO     | [job] job monitor thread has finished
[2026-03-14 06:03:44] 2026-03-14 05:03:08,634 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 06:03:44] 2026-03-14 05:03:09,711 | INFO     | [monitor] cgroup control has ended
[2026-03-14 06:03:44] 2026-03-14 05:03:12,641 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 06:03:44] 2026-03-14 05:03:13,645 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140538456299328)>', '<ExcThread(monitor, started 140537789126400)>']
[2026-03-14 06:03:44] 2026-03-14 05:03:14,576 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 06:03:44] 2026-03-14 05:03:14,576 | INFO     | [monitor] control thread has ended
[2026-03-14 06:03:44] 2026-03-14 05:03:18,671 | INFO     | all workflow threads have been joined
[2026-03-14 06:03:44] 2026-03-14 05:03:18,671 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 06:03:44] 2026-03-14 05:03:18,672 | INFO     | traces error code: 0
[2026-03-14 06:03:44] 2026-03-14 05:03:18,672 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 06:03:44] 2026-03-14 05:03:18,712 [wrapper] ==== pilot stdout END ====
[2026-03-14 06:03:44] 2026-03-14 05:03:18,714 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 06:03:44] 2026-03-14 05:03:18,717 [wrapper] pilotpid: 1646650
[2026-03-14 06:03:44] 2026-03-14 05:03:18,718 [wrapper] Pilot exit status: 0
[2026-03-14 06:03:44] 2026-03-14 05:03:18,724 [wrapper] pandaids: 7044205875
[2026-03-14 06:03:44] 2026-03-14 05:03:18,736 [wrapper] cleanup supervisor_pilot 1656827 1646651
[2026-03-14 06:03:44] 2026-03-14 05:03:18,738 [wrapper] Test setup, not cleaning
[2026-03-14 06:03:44] 2026-03-14 05:03:18,740 [wrapper] apfmon messages muted
[2026-03-14 06:03:44] 2026-03-14 05:03:18,742 [wrapper] ==== wrapper stdout END ====
[2026-03-14 06:03:44] 2026-03-14 05:03:18,744 [wrapper] ==== wrapper stderr END ====
[2026-03-14 06:03:44]  *** Error codes and diagnostics ***
[2026-03-14 06:03:44]     "exeErrorCode": 0,
[2026-03-14 06:03:44]     "exeErrorDiag": "",
[2026-03-14 06:03:44]     "pilotErrorCode": 0,
[2026-03-14 06:03:44]     "pilotErrorDiag": "",
[2026-03-14 06:03:44]  *** Listing of results directory ***
[2026-03-14 06:03:44] total 618936
[2026-03-14 06:03:44] -rw-r--r-- 1 boinc boinc    585013 Mar 13 14:59 pilot3.tar.gz
[2026-03-14 06:03:44] -rw-r--r-- 1 boinc boinc      5111 Mar 13 15:00 queuedata.json
[2026-03-14 06:03:44] -rwx------ 1 boinc boinc     36322 Mar 13 15:01 runpilot2-wrapper.sh
[2026-03-14 06:03:44] -rw-r--r-- 1 boinc boinc       100 Mar 14 04:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 06:03:44] -rwxr-xr-x 1 boinc boinc      7986 Mar 14 04:08 run_atlas
[2026-03-14 06:03:44] -rw-r--r-- 1 boinc boinc       105 Mar 14 04:08 job.xml
[2026-03-14 06:03:44] -rw-r--r-- 2 boinc boinc 444179157 Mar 14 04:08 EVNT.46701403._002375.pool.root.1
[2026-03-14 06:03:44] -rw-r--r-- 2 boinc boinc    597535 Mar 14 04:08 input.tar.gz
[2026-03-14 06:03:44] -rw-r--r-- 2 boinc boinc     15845 Mar 14 04:08 start_atlas.sh
[2026-03-14 06:03:44] drwxrwx--x 2 boinc boinc      4096 Mar 14 04:08 shared
[2026-03-14 06:03:44] -rw-r--r-- 1 boinc boinc         0 Mar 14 04:08 boinc_setup_complete
[2026-03-14 06:03:44] -rw-r--r-- 1 boinc boinc      6206 Mar 14 04:08 init_data.xml
[2026-03-14 06:03:44] -rw-r--r-- 1 boinc boinc         0 Mar 14 04:08 boinc_lockfile
[2026-03-14 06:03:44] -rw-r--r-- 1 boinc boinc      2571 Mar 14 04:08 pandaJob.out
[2026-03-14 06:03:44] -rw------- 1 boinc boinc   1006013 Mar 14 04:08 agis_schedconf.cvmfs.json
[2026-03-14 06:03:44] -rw------- 1 boinc boinc   1511579 Mar 14 04:08 agis_ddmendpoints.agis.ALL.json
[2026-03-14 06:03:44] -rw------- 1 boinc boinc       420 Mar 14 04:09 workernode_map.json
[2026-03-14 06:03:44] drwx------ 5 boinc boinc      4096 Mar 14 04:09 pilot3
[2026-03-14 06:03:44] -rw------- 1 boinc boinc        95 Mar 14 06:02 pilot_heartbeat.json
[2026-03-14 06:03:44] -rw------- 1 boinc boinc 183169243 Mar 14 06:02 HITS.48955015._016018.pool.root.1
[2026-03-14 06:03:44] -rw-r--r-- 1 boinc boinc       530 Mar 14 06:02 boinc_task_state.xml
[2026-03-14 06:03:44] -rw------- 1 boinc boinc      1015 Mar 14 06:02 memory_monitor_summary.json
[2026-03-14 06:03:44] -rw------- 1 boinc boinc    270789 Mar 14 06:03 log.48955015._016018.job.log.tgz.1
[2026-03-14 06:03:44] -rw------- 1 boinc boinc      6297 Mar 14 06:03 heartbeat.json
[2026-03-14 06:03:44] -rw------- 1 boinc boinc      6125 Mar 14 06:03 pilotlog.txt
[2026-03-14 06:03:44] -rw------- 1 boinc boinc    986881 Mar 14 06:03 log.48955015._016018.job.log.1
[2026-03-14 06:03:44] -rw------- 1 boinc boinc       357 Mar 14 06:03 output.list
[2026-03-14 06:03:44] -rw-r--r-- 1 boinc boinc       620 Mar 14 06:03 runtime_log
[2026-03-14 06:03:44] -rw------- 1 boinc boinc   1280000 Mar 14 06:03 result.tar.gz
[2026-03-14 06:03:44] -rw------- 1 boinc boinc       658 Mar 14 06:03 tYKMDmwFIL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmIkpLDmjMVpFm.diag
[2026-03-14 06:03:44] -rw-r--r-- 1 boinc boinc      8901 Mar 14 06:03 runtime_log.err
[2026-03-14 06:03:44] -rw-r--r-- 1 boinc boinc      8192 Mar 14 06:03 boinc_mmap_file
[2026-03-14 06:03:44] -rw-r--r-- 1 boinc boinc        27 Mar 14 06:03 wrapper_checkpoint.txt
[2026-03-14 06:03:44] -rw-r--r-- 1 boinc boinc      7672 Mar 14 06:03 stderr.txt
[2026-03-14 06:03:44] HITS file was successfully produced:
[2026-03-14 06:03:44] -rw------- 1 boinc boinc 183169243 Mar 14 06:02 shared/HITS.pool.root.1
[2026-03-14 06:03:44]  *** Contents of shared directory: ***
[2026-03-14 06:03:44] total 614508
[2026-03-14 06:03:44] -rw-r--r-- 2 boinc boinc 444179157 Mar 14 04:08 ATLAS.root_0
[2026-03-14 06:03:44] -rw-r--r-- 2 boinc boinc    597535 Mar 14 04:08 input.tar.gz
[2026-03-14 06:03:44] -rw-r--r-- 2 boinc boinc     15845 Mar 14 04:08 start_atlas.sh
[2026-03-14 06:03:44] -rw------- 1 boinc boinc 183169243 Mar 14 06:02 HITS.pool.root.1
[2026-03-14 06:03:44] -rw------- 1 boinc boinc   1280000 Mar 14 06:03 result.tar.gz
06:03:46 (1642625): run_atlas exited; CPU time 13243.223732
06:03:46 (1642625): called boinc_finish(0)

</stderr_txt>
]]>

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