Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:10:21 (3087): wrapper (7.7.26015): starting
03:10:21 (3087): wrapper: running run_atlas (--nthreads 8)
[2026-03-14 03:10:21] Arguments: --nthreads 8
[2026-03-14 03:10:21] Threads: 8
[2026-03-14 03:10:21] Checking for CVMFS
[2026-03-14 03:10:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 03:10:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 03:10:25] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 03:10:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 03:10:26] 2.11.2.0 10131 126958 136660 157260 3 54 22264264 25165825 4834 130560 152 38324616 99.810 27688326 1005 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-14 03:10:26] CVMFS is ok
[2026-03-14 03:10:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 03:10:26] Checking for apptainer binary...
[2026-03-14 03:10:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 03:10:26] Running /usr/bin/apptainer --version
[2026-03-14 03:10:26] apptainer version 1.3.2-1.el7
[2026-03-14 03:10:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 03:10:31] cg-vwn460.simple-grid.lan
[2026-03-14 03:10:31] apptainer works
[2026-03-14 03:10:31] Set ATHENA_PROC_NUMBER=8
[2026-03-14 03:10:31] Set ATHENA_CORE_NUMBER=8
[2026-03-14 03:10:31] Starting ATLAS job with PandaID=7044440096
[2026-03-14 03:10:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 06:57:13]  *** The last 200 lines of the pilot log: ***
[2026-03-14 06:57:13] 2026-03-14 05:56:34,849 | INFO     | total number of processed events: 400 (read)
[2026-03-14 06:57:13] 2026-03-14 05:56:34,851 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-7044440096/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 06:57:13] 2026-03-14 05:56:34,851 | INFO     | extracted standard info from prmon json
[2026-03-14 06:57:13] 2026-03-14 05:56:34,851 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 06:57:13] 2026-03-14 05:56:34,851 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 06:57:13] 2026-03-14 05:56:34,852 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 06:57:13] 2026-03-14 05:56:34,852 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 06:57:13] 2026-03-14 05:56:34,856 | INFO     | fitting pss+swap vs Time
[2026-03-14 06:57:13] 2026-03-14 05:56:34,857 | INFO     | sum of square deviations: 2954447953.0
[2026-03-14 06:57:13] 2026-03-14 05:56:34,859 | INFO     | sum of deviations: 56719992736.49995
[2026-03-14 06:57:13] 2026-03-14 05:56:34,859 | INFO     | mean x: 1773461308.5
[2026-03-14 06:57:13] 2026-03-14 05:56:34,859 | INFO     | mean y: 2468269.4575471696
[2026-03-14 06:57:13] 2026-03-14 05:56:34,859 | INFO     | intersect: -34044742626.385807
[2026-03-14 06:57:13] 2026-03-14 05:56:34,859 | INFO     | chi2: 5.760284328952006
[2026-03-14 06:57:13] 2026-03-14 05:56:34,860 | INFO     | sum of square deviations: 2750295288.0
[2026-03-14 06:57:13] 2026-03-14 05:56:34,861 | INFO     | sum of deviations: 55522354147.0
[2026-03-14 06:57:13] 2026-03-14 05:56:34,861 | INFO     | mean x: 1773461156.0
[2026-03-14 06:57:13] 2026-03-14 05:56:34,862 | INFO     | mean y: 2467374.690821256
[2026-03-14 06:57:13] 2026-03-14 05:56:34,862 | INFO     | intersect: -35799774951.43574
[2026-03-14 06:57:13] 2026-03-14 05:56:34,862 | INFO     | chi2: 5.771218105507016
[2026-03-14 06:57:13] 2026-03-14 05:56:34,862 | INFO     | current chi2=5.771218105507016 (change=-0.18981313995309995 %)
[2026-03-14 06:57:13] 2026-03-14 05:56:34,862 | INFO     | right removable region: 206
[2026-03-14 06:57:13] 2026-03-14 05:56:34,863 | INFO     | sum of square deviations: 2750295288.0
[2026-03-14 06:57:13] 2026-03-14 05:56:34,864 | INFO     | sum of deviations: -16163099178.999998
[2026-03-14 06:57:13] 2026-03-14 05:56:34,864 | INFO     | mean x: 1773461461.0
[2026-03-14 06:57:13] 2026-03-14 05:56:34,865 | INFO     | mean y: 2522656.38647343
[2026-03-14 06:57:13] 2026-03-14 05:56:34,865 | INFO     | intersect: 10424906612.51869
[2026-03-14 06:57:13] 2026-03-14 05:56:34,865 | INFO     | chi2: 1.027586733392098
[2026-03-14 06:57:13] 2026-03-14 05:56:34,865 | INFO     | current chi2=1.027586733392098 (change=82.16083313409892 %)
[2026-03-14 06:57:13] 2026-03-14 05:56:34,866 | INFO     | sum of square deviations: 2555770710.5
[2026-03-14 06:57:13] 2026-03-14 05:56:34,867 | INFO     | sum of deviations: -40939794888.49999
[2026-03-14 06:57:13] 2026-03-14 05:56:34,867 | INFO     | mean x: 1773461613.5
[2026-03-14 06:57:13] 2026-03-14 05:56:34,867 | INFO     | mean y: 2541891.5396039602
[2026-03-14 06:57:13] 2026-03-14 05:56:34,868 | INFO     | intersect: 28410862873.164005
[2026-03-14 06:57:13] 2026-03-14 05:56:34,868 | INFO     | chi2: 0.20044162374008367
[2026-03-14 06:57:13] 2026-03-14 05:56:34,868 | INFO     | current chi2=0.20044162374008367 (change=80.49394593890686 %)
[2026-03-14 06:57:13] 2026-03-14 05:56:34,868 | INFO     | sum of square deviations: 2370641658.0
[2026-03-14 06:57:13] 2026-03-14 05:56:34,870 | INFO     | sum of deviations: -37406096273.00001
[2026-03-14 06:57:13] 2026-03-14 05:56:34,870 | INFO     | mean x: 1773461766.0
[2026-03-14 06:57:13] 2026-03-14 05:56:34,870 | INFO     | mean y: 2538947.228426396
[2026-03-14 06:57:13] 2026-03-14 05:56:34,870 | INFO     | intersect: 27985798809.22171
[2026-03-14 06:57:13] 2026-03-14 05:56:34,871 | INFO     | chi2: 0.1897422360209408
[2026-03-14 06:57:13] 2026-03-14 05:56:34,871 | INFO     | current chi2=0.1897422360209408 (change=5.337907127023154 %)
[2026-03-14 06:57:13] 2026-03-14 05:56:34,871 | INFO     | left removable region: 30
[2026-03-14 06:57:13] 2026-03-14 05:56:34,871 | INFO     | sum of square deviations: 1690450300.0
[2026-03-14 06:57:13] 2026-03-14 05:56:34,872 | INFO     | sum of deviations: -17588125790.999996
[2026-03-14 06:57:13] 2026-03-14 05:56:34,873 | INFO     | mean x: 1773462040.5
[2026-03-14 06:57:13] 2026-03-14 05:56:34,873 | INFO     | mean y: 2521817.5681818184
[2026-03-14 06:57:13] 2026-03-14 05:56:34,873 | INFO     | intersect: 18454335191.71916
[2026-03-14 06:57:13] 2026-03-14 05:56:34,873 | INFO     | chi2: 0.1416805023540995
[2026-03-14 06:57:13] 2026-03-14 05:56:34,873 | INFO     | current memory leak: -10.40 B/s (using 176 data points, chi2=0.14)
[2026-03-14 06:57:13] 2026-03-14 05:56:34,874 | INFO     | could have reported an average CPU frequency of 2250 MHz (11 samples)
[2026-03-14 06:57:13] 2026-03-14 05:56:34,874 | INFO     | ..............................
[2026-03-14 06:57:13] 2026-03-14 05:56:34,874 | INFO     | . Timing measurements:
[2026-03-14 06:57:13] 2026-03-14 05:56:34,874 | INFO     | . get job = 0 s
[2026-03-14 06:57:13] 2026-03-14 05:56:34,874 | INFO     | . initial setup = 134 s
[2026-03-14 06:57:13] 2026-03-14 05:56:34,874 | INFO     | . payload setup = 143 s
[2026-03-14 06:57:13] 2026-03-14 05:56:34,875 | INFO     | . stage-in = 0 s
[2026-03-14 06:57:13] 2026-03-14 05:56:34,875 | INFO     | . payload execution = 13024 s
[2026-03-14 06:57:13] 2026-03-14 05:56:34,875 | INFO     | . stage-out = 2 s
[2026-03-14 06:57:13] 2026-03-14 05:56:34,875 | INFO     | . log creation = 0 s
[2026-03-14 06:57:13] 2026-03-14 05:56:34,875 | INFO     | ..............................
[2026-03-14 06:57:13] 2026-03-14 05:56:34,989 | INFO     | 
[2026-03-14 06:57:13] 2026-03-14 05:56:34,989 | INFO     | job summary report
[2026-03-14 06:57:13] 2026-03-14 05:56:34,989 | INFO     | --------------------------------------------------
[2026-03-14 06:57:13] 2026-03-14 05:56:34,989 | INFO     | PanDA job id: 7044440096
[2026-03-14 06:57:13] 2026-03-14 05:56:34,989 | INFO     | task id: 48955010
[2026-03-14 06:57:13] 2026-03-14 05:56:34,989 | INFO     | errors: (none)
[2026-03-14 06:57:13] 2026-03-14 05:56:34,990 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 06:57:13] 2026-03-14 05:56:34,990 | INFO     | pilot state: finished 
[2026-03-14 06:57:13] 2026-03-14 05:56:34,990 | INFO     | transexitcode: 0
[2026-03-14 06:57:13] 2026-03-14 05:56:34,990 | INFO     | exeerrorcode: 0
[2026-03-14 06:57:13] 2026-03-14 05:56:34,990 | INFO     | exeerrordiag: 
[2026-03-14 06:57:13] 2026-03-14 05:56:34,990 | INFO     | exitcode: 0
[2026-03-14 06:57:13] 2026-03-14 05:56:34,990 | INFO     | exitmsg: OK
[2026-03-14 06:57:13] 2026-03-14 05:56:34,990 | INFO     | cpuconsumptiontime: 50232 s
[2026-03-14 06:57:13] 2026-03-14 05:56:34,990 | INFO     | nevents: 400
[2026-03-14 06:57:13] 2026-03-14 05:56:34,990 | INFO     | neventsw: 0
[2026-03-14 06:57:13] 2026-03-14 05:56:34,991 | INFO     | pid: 11700
[2026-03-14 06:57:13] 2026-03-14 05:56:34,991 | INFO     | pgrp: 11700
[2026-03-14 06:57:13] 2026-03-14 05:56:34,991 | INFO     | corecount: 8
[2026-03-14 06:57:13] 2026-03-14 05:56:34,991 | INFO     | event service: False
[2026-03-14 06:57:13] 2026-03-14 05:56:34,991 | INFO     | sizes: {0: 2279748, 1: 2280209, 12: 2280209, 13171: 2310355, 13175: 2319353, 13178: 2319731}
[2026-03-14 06:57:13] 2026-03-14 05:56:34,991 | INFO     | --------------------------------------------------
[2026-03-14 06:57:13] 2026-03-14 05:56:34,991 | INFO     | 
[2026-03-14 06:57:13] 2026-03-14 05:56:34,991 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-03-14 06:57:13] 2026-03-14 05:56:35,024 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 06:57:13] 2026-03-14 05:56:35,024 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 06:57:13] 2026-03-14 05:56:35,024 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 06:57:13] 2026-03-14 05:56:35,025 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 06:57:13] 2026-03-14 05:56:35,025 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 06:57:13] 2026-03-14 05:56:35,025 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 06:57:13] 2026-03-14 05:56:35,025 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 06:57:13] 2026-03-14 05:56:35,025 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 06:57:13] 2026-03-14 05:56:35,025 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 06:57:13] 2026-03-14 05:56:35,025 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 06:57:13] 2026-03-14 05:56:35,025 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 06:57:13] 2026-03-14 05:56:35,025 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 06:57:13] 2026-03-14 05:56:35,026 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 06:57:13] 2026-03-14 05:56:35,026 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 06:57:13] 2026-03-14 05:56:35,026 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 06:57:13] 2026-03-14 05:56:35,026 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 06:57:13] 2026-03-14 05:56:35,026 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 06:57:13] 2026-03-14 05:56:35,026 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 06:57:13] 2026-03-14 05:56:35,026 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 06:57:13] 2026-03-14 05:56:35,026 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 06:57:13] 2026-03-14 05:56:35,026 | INFO     | job 7044440096 has completed (purged errors)
[2026-03-14 06:57:13] 2026-03-14 05:56:35,027 | INFO     | overall cleanup function is called
[2026-03-14 06:57:13] 2026-03-14 05:56:36,035 | INFO     | --- collectZombieJob: --- 10, [11700]
[2026-03-14 06:57:13] 2026-03-14 05:56:36,036 | INFO     | zombie collector waiting for pid 11700
[2026-03-14 06:57:13] 2026-03-14 05:56:36,036 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 06:57:13] 2026-03-14 05:56:36,036 | INFO     | collected zombie processes
[2026-03-14 06:57:13] 2026-03-14 05:56:36,036 | INFO     | will attempt to kill all subprocesses of pid=11700
[2026-03-14 06:57:13] 2026-03-14 05:56:36,134 | INFO     | process IDs to be killed: [11700] (in reverse order)
[2026-03-14 06:57:13] 2026-03-14 05:56:36,193 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 06:57:13] 2026-03-14 05:56:36,193 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 06:57:13] 2026-03-14 05:56:36,196 | INFO     | did not find any defunct processes belonging to 11700
[2026-03-14 06:57:13] 2026-03-14 05:56:36,199 | INFO     | did not find any defunct processes belonging to 11700
[2026-03-14 06:57:13] 2026-03-14 05:56:36,200 | INFO     | ready for new job
[2026-03-14 06:57:13] 2026-03-14 05:56:36,200 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 06:57:13] 2026-03-14 05:56:36,202 | INFO     | **************************************
[2026-03-14 06:57:13] 2026-03-14 05:56:36,202 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 06:57:13] 2026-03-14 05:56:36,202 | INFO     | **************************************
[2026-03-14 06:57:13] 2026-03-14 05:56:36,202 | INFO     | 
[2026-03-14 06:57:13] 2026-03-14 05:56:36,203 | INFO     | pilot is running in a VM
[2026-03-14 06:57:13] 2026-03-14 05:56:36,203 | INFO     | architecture information:
[2026-03-14 06:57:13] 2026-03-14 05:56:36,204 | INFO     | executing command: cat /etc/os-release
[2026-03-14 06:57:13] 2026-03-14 05:56:36,218 | INFO     | cat /etc/os-release:
[2026-03-14 06:57:13] NAME="CentOS Linux"
[2026-03-14 06:57:13] VERSION="7 (Core)"
[2026-03-14 06:57:13] ID="centos"
[2026-03-14 06:57:13] ID_LIKE="rhel fedora"
[2026-03-14 06:57:13] VERSION_ID="7"
[2026-03-14 06:57:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 06:57:13] ANSI_COLOR="0;31"
[2026-03-14 06:57:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 06:57:13] HOME_URL="https://www.centos.org/"
[2026-03-14 06:57:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 06:57:13] 
[2026-03-14 06:57:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 06:57:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 06:57:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 06:57:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 06:57:13] 
[2026-03-14 06:57:13] 2026-03-14 05:56:36,219 | INFO     | **************************************
[2026-03-14 06:57:13] 2026-03-14 05:56:36,722 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-03-14 06:57:13] 2026-03-14 05:56:36,739 | INFO     | sufficient remaining disk space (494659436544 B)
[2026-03-14 06:57:13] 2026-03-14 05:56:36,739 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 06:57:13] 2026-03-14 05:56:36,739 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 06:57:13] 2026-03-14 05:56:36,739 | INFO     | update_server=False
[2026-03-14 06:57:13] 2026-03-14 05:56:36,740 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 06:57:13] 2026-03-14 05:56:36,740 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 06:57:13] 2026-03-14 05:56:36,741 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 06:57:13] 2026-03-14 05:56:36,890 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-14 06:57:13] 2026-03-14 05:56:36,891 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-14 06:57:13] 2026-03-14 05:56:36,891 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 06:57:13] 2026-03-14 05:56:36,891 | INFO     | will abort loop
[2026-03-14 06:57:13] 2026-03-14 05:56:37,032 | INFO     | all data control threads have been joined
[2026-03-14 06:57:13] 2026-03-14 05:56:37,526 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 06:57:13] 2026-03-14 05:56:37,544 | INFO     | all job control threads have been joined
[2026-03-14 06:57:13] 2026-03-14 05:56:37,746 | INFO     | [job] retrieve thread has finished
[2026-03-14 06:57:13] 2026-03-14 05:56:37,746 | INFO     | [job] queue monitor thread has finished
[2026-03-14 06:57:13] 2026-03-14 05:56:37,896 | INFO     | [job] job monitor thread has finished
[2026-03-14 06:57:13] 2026-03-14 05:56:37,935 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 06:57:13] 2026-03-14 05:56:38,001 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 06:57:13] 2026-03-14 05:56:38,037 | INFO     | [data] control thread has finished
[2026-03-14 06:57:13] 2026-03-14 05:56:38,112 | INFO     | all payload control threads have been joined
[2026-03-14 06:57:13] 2026-03-14 05:56:38,295 | INFO     | [job] validate thread has finished
[2026-03-14 06:57:13] 2026-03-14 05:56:38,436 | INFO     | [payload] failed_post thread has finished
[2026-03-14 06:57:13] 2026-03-14 05:56:38,471 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 06:57:13] 2026-03-14 05:56:38,471 | INFO     | [data] copytool_in thread has finished
[2026-03-14 06:57:13] 2026-03-14 05:56:38,550 | INFO     | [job] control thread has finished
[2026-03-14 06:57:13] 2026-03-14 05:56:38,795 | INFO     | [payload] validate_post thread has finished
[2026-03-14 06:57:13] 2026-03-14 05:56:38,852 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 06:57:13] 2026-03-14 05:56:39,119 | INFO     | [payload] control thread has finished
[2026-03-14 06:57:13] 2026-03-14 05:56:39,532 | INFO     | [data] copytool_out thread has finished
[2026-03-14 06:57:13] 2026-03-14 05:56:40,748 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 06:57:13] 2026-03-14 05:57:05,835 | INFO     | [monitor] cgroup control has ended
[2026-03-14 06:57:13] 2026-03-14 05:57:07,473 | INFO     | PID=7177 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-14 06:57:13] 2026-03-14 05:57:07,473 | INFO     | .. there are 9 such processes running
[2026-03-14 06:57:13] 2026-03-14 05:57:07,474 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 06:57:13] 2026-03-14 05:57:07,474 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 06:57:13] 2026-03-14 05:57:07,474 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 06:57:13] 2026-03-14 05:57:07,592 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140192866842432)>', '<ExcThread(monitor, started 140192136546048)>']
[2026-03-14 06:57:13] 2026-03-14 05:57:08,479 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 06:57:13] 2026-03-14 05:57:08,480 | INFO     | [monitor] control thread has ended
[2026-03-14 06:57:13] 2026-03-14 05:57:12,617 | INFO     | all workflow threads have been joined
[2026-03-14 06:57:13] 2026-03-14 05:57:12,617 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 06:57:13] 2026-03-14 05:57:12,618 | INFO     | traces error code: 0
[2026-03-14 06:57:13] 2026-03-14 05:57:12,618 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 06:57:13] 2026-03-14 05:57:12,748 [wrapper] ==== pilot stdout END ====
[2026-03-14 06:57:13] 2026-03-14 05:57:12,760 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 06:57:13] 2026-03-14 05:57:12,768 [wrapper] pilotpid: 7177
[2026-03-14 06:57:13] 2026-03-14 05:57:12,775 [wrapper] Pilot exit status: 0
[2026-03-14 06:57:13] 2026-03-14 05:57:12,806 [wrapper] pandaids: 7044440096
[2026-03-14 06:57:13] 2026-03-14 05:57:12,850 [wrapper] cleanup supervisor_pilot 19281 7178
[2026-03-14 06:57:13] 2026-03-14 05:57:12,864 [wrapper] Test setup, not cleaning
[2026-03-14 06:57:13] 2026-03-14 05:57:12,868 [wrapper] apfmon messages muted
[2026-03-14 06:57:13] 2026-03-14 05:57:12,872 [wrapper] ==== wrapper stdout END ====
[2026-03-14 06:57:13] 2026-03-14 05:57:12,880 [wrapper] ==== wrapper stderr END ====
[2026-03-14 06:57:13]  *** Error codes and diagnostics ***
[2026-03-14 06:57:13]     "exeErrorCode": 0,
[2026-03-14 06:57:13]     "exeErrorDiag": "",
[2026-03-14 06:57:13]     "pilotErrorCode": 0,
[2026-03-14 06:57:13]     "pilotErrorDiag": "",
[2026-03-14 06:57:13]  *** Listing of results directory ***
[2026-03-14 06:57:13] total 617696
[2026-03-14 06:57:13] -rw-r--r--. 1 boinc boinc    585013 Mar 13 14:59 pilot3.tar.gz
[2026-03-14 06:57:13] -rw-r--r--. 1 boinc boinc      5111 Mar 13 15:00 queuedata.json
[2026-03-14 06:57:13] -rwx------. 1 boinc boinc     36322 Mar 13 15:01 runpilot2-wrapper.sh
[2026-03-14 06:57:13] -rw-r--r--. 1 boinc boinc       100 Mar 14 03:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 06:57:13] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 03:10 run_atlas
[2026-03-14 06:57:13] -rw-r--r--. 1 boinc boinc       105 Mar 14 03:10 job.xml
[2026-03-14 06:57:13] -rw-r--r--. 1 boinc boinc      6391 Mar 14 03:10 init_data.xml
[2026-03-14 06:57:13] -rw-r--r--. 2 boinc boinc 438986295 Mar 14 03:10 EVNT.46701403._001621.pool.root.1
[2026-03-14 06:57:13] -rw-r--r--. 2 boinc boinc     15845 Mar 14 03:10 start_atlas.sh
[2026-03-14 06:57:13] drwxrwx--x. 2 boinc boinc        68 Mar 14 03:10 shared
[2026-03-14 06:57:13] -rw-r--r--. 2 boinc boinc    597526 Mar 14 03:10 input.tar.gz
[2026-03-14 06:57:13] -rw-r--r--. 1 boinc boinc         0 Mar 14 03:10 boinc_lockfile
[2026-03-14 06:57:13] -rw-r--r--. 1 boinc boinc      2564 Mar 14 03:10 pandaJob.out
[2026-03-14 06:57:13] -rw-------. 1 boinc boinc       413 Mar 14 03:16 workernode_map.json
[2026-03-14 06:57:13] -rw-------. 1 boinc boinc   1006013 Mar 14 03:16 agis_schedconf.cvmfs.json
[2026-03-14 06:57:13] drwx------. 5 boinc boinc      4096 Mar 14 03:16 pilot3
[2026-03-14 06:57:13] -rw-------. 1 boinc boinc 184978813 Mar 14 06:55 HITS.48955010._031344.pool.root.1
[2026-03-14 06:57:13] -rw-r--r--. 1 boinc boinc       532 Mar 14 06:56 boinc_task_state.xml
[2026-03-14 06:57:13] -rw-------. 1 boinc boinc      1018 Mar 14 06:56 memory_monitor_summary.json
[2026-03-14 06:57:13] -rw-------. 1 boinc boinc   1511579 Mar 14 06:56 agis_ddmendpoints.agis.ALL.json
[2026-03-14 06:57:13] -rw-------. 1 boinc boinc    473886 Mar 14 06:56 log.48955010._031344.job.log.tgz.1
[2026-03-14 06:57:13] -rw-------. 1 boinc boinc      6329 Mar 14 06:56 heartbeat.json
[2026-03-14 06:57:13] -rw-------. 1 boinc boinc        95 Mar 14 06:57 pilot_heartbeat.json
[2026-03-14 06:57:13] -rw-r--r--. 1 boinc boinc      8192 Mar 14 06:57 boinc_mmap_file
[2026-03-14 06:57:13] -rw-r--r--. 1 boinc boinc        28 Mar 14 06:57 wrapper_checkpoint.txt
[2026-03-14 06:57:13] -rw-------. 1 boinc boinc      5065 Mar 14 06:57 pilotlog.txt
[2026-03-14 06:57:13] -rw-------. 1 boinc boinc   1845274 Mar 14 06:57 log.48955010._031344.job.log.1
[2026-03-14 06:57:13] -rw-------. 1 boinc boinc       357 Mar 14 06:57 output.list
[2026-03-14 06:57:13] -rw-r--r--. 1 boinc boinc       620 Mar 14 06:57 runtime_log
[2026-03-14 06:57:13] -rw-------. 1 boinc boinc   2334720 Mar 14 06:57 result.tar.gz
[2026-03-14 06:57:13] -rw-r--r--. 1 boinc boinc      8816 Mar 14 06:57 runtime_log.err
[2026-03-14 06:57:13] -rw-------. 1 boinc boinc       656 Mar 14 06:57 AfiNDmgFIL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmu8mLDmTQkU3n.diag
[2026-03-14 06:57:13] -rw-r--r--. 1 boinc boinc     20700 Mar 14 06:57 stderr.txt
[2026-03-14 06:57:13] HITS file was successfully produced:
[2026-03-14 06:57:13] -rw-------. 1 boinc boinc 184978813 Mar 14 06:55 shared/HITS.pool.root.1
[2026-03-14 06:57:13]  *** Contents of shared directory: ***
[2026-03-14 06:57:13] total 612224
[2026-03-14 06:57:13] -rw-r--r--. 2 boinc boinc 438986295 Mar 14 03:10 ATLAS.root_0
[2026-03-14 06:57:13] -rw-r--r--. 2 boinc boinc     15845 Mar 14 03:10 start_atlas.sh
[2026-03-14 06:57:13] -rw-r--r--. 2 boinc boinc    597526 Mar 14 03:10 input.tar.gz
[2026-03-14 06:57:13] -rw-------. 1 boinc boinc 184978813 Mar 14 06:55 HITS.pool.root.1
[2026-03-14 06:57:13] -rw-------. 1 boinc boinc   2334720 Mar 14 06:57 result.tar.gz
06:57:15 (3087): run_atlas exited; CPU time 50425.794980
06:57:15 (3087): called boinc_finish(0)

</stderr_txt>
]]>

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