Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:57:52 (22782): wrapper (7.7.26015): starting
02:57:52 (22782): wrapper: running run_atlas (--nthreads 8)
[2026-03-14 02:57:52] Arguments: --nthreads 8
[2026-03-14 02:57:52] Threads: 8
[2026-03-14 02:57:52] Checking for CVMFS
[2026-03-14 02:57:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 02:57:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 02:57:52] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 02:57:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 02:57:53] 2.11.2.0 11565 126944 132792 157260 1 118 21483725 25165824 694 130560 162 31055984 99.790 28618311 961 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-14 02:57:53] CVMFS is ok
[2026-03-14 02:57:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 02:57:53] Checking for apptainer binary...
[2026-03-14 02:57:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 02:57:53] Running /usr/bin/apptainer --version
[2026-03-14 02:57:53] apptainer version 1.3.2-1.el7
[2026-03-14 02:57:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 02:57:54] cg-vwn374.simple-grid.lan
[2026-03-14 02:57:54] apptainer works
[2026-03-14 02:57:54] Set ATHENA_PROC_NUMBER=8
[2026-03-14 02:57:54] Set ATHENA_CORE_NUMBER=8
[2026-03-14 02:57:54] Starting ATLAS job with PandaID=7044333844
[2026-03-14 02:57:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 05:56:48]  *** The last 200 lines of the pilot log: ***
[2026-03-14 05:56:48] 2026-03-14 04:55:43,680 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-7044333844/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 05:56:48] 2026-03-14 04:55:43,681 | INFO     | extracted standard info from prmon json
[2026-03-14 05:56:48] 2026-03-14 04:55:43,681 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 05:56:48] 2026-03-14 04:55:43,681 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 05:56:48] 2026-03-14 04:55:43,682 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 05:56:48] 2026-03-14 04:55:43,682 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 05:56:48] 2026-03-14 04:55:43,686 | INFO     | fitting pss+swap vs Time
[2026-03-14 05:56:48] 2026-03-14 04:55:43,686 | INFO     | sum of square deviations: 1633472487.5
[2026-03-14 05:56:48] 2026-03-14 04:55:43,688 | INFO     | sum of deviations: 5815602627.999989
[2026-03-14 05:56:48] 2026-03-14 04:55:43,688 | INFO     | mean x: 1773458797.5
[2026-03-14 05:56:48] 2026-03-14 04:55:43,688 | INFO     | mean y: 2470169.8505747127
[2026-03-14 05:56:48] 2026-03-14 04:55:43,688 | INFO     | intersect: -6311521478.1971245
[2026-03-14 05:56:48] 2026-03-14 04:55:43,689 | INFO     | chi2: 2.309176288891864
[2026-03-14 05:56:48] 2026-03-14 04:55:43,689 | INFO     | sum of square deviations: 1496660620.0
[2026-03-14 05:56:48] 2026-03-14 04:55:43,690 | INFO     | sum of deviations: 17223283022.0
[2026-03-14 05:56:48] 2026-03-14 04:55:43,690 | INFO     | mean x: 1773458645.0
[2026-03-14 05:56:48] 2026-03-14 04:55:43,691 | INFO     | mean y: 2482581.674556213
[2026-03-14 05:56:48] 2026-03-14 04:55:43,691 | INFO     | intersect: -20406138960.494183
[2026-03-14 05:56:48] 2026-03-14 04:55:43,691 | INFO     | chi2: 1.5065257611619671
[2026-03-14 05:56:48] 2026-03-14 04:55:43,691 | INFO     | current chi2=1.5065257611619671 (change=34.75917068744352 %)
[2026-03-14 05:56:48] 2026-03-14 04:55:43,695 | INFO     | sum of square deviations: 1367709365.0
[2026-03-14 05:56:48] 2026-03-14 04:55:43,696 | INFO     | sum of deviations: 16691232939.500002
[2026-03-14 05:56:48] 2026-03-14 04:55:43,696 | INFO     | mean x: 1773458492.5
[2026-03-14 05:56:48] 2026-03-14 04:55:43,696 | INFO     | mean y: 2481952.0670731706
[2026-03-14 05:56:48] 2026-03-14 04:55:43,697 | INFO     | intersect: -21640426668.984898
[2026-03-14 05:56:48] 2026-03-14 04:55:43,697 | INFO     | chi2: 1.5079838530122216
[2026-03-14 05:56:48] 2026-03-14 04:55:43,697 | INFO     | current chi2=1.5079838530122216 (change=-0.09678505922991068 %)
[2026-03-14 05:56:48] 2026-03-14 04:55:43,697 | INFO     | right removable region: 163
[2026-03-14 05:56:48] 2026-03-14 04:55:43,698 | INFO     | sum of square deviations: 1496660620.0
[2026-03-14 05:56:48] 2026-03-14 04:55:43,699 | INFO     | sum of deviations: -19210198568.0
[2026-03-14 05:56:48] 2026-03-14 04:55:43,699 | INFO     | mean x: 1773458950.0
[2026-03-14 05:56:48] 2026-03-14 04:55:43,699 | INFO     | mean y: 2497673.0591715975
[2026-03-14 05:56:48] 2026-03-14 04:55:43,699 | INFO     | intersect: 22765506284.655285
[2026-03-14 05:56:48] 2026-03-14 04:55:43,700 | INFO     | chi2: 0.9141638128030158
[2026-03-14 05:56:48] 2026-03-14 04:55:43,700 | INFO     | current chi2=0.9141638128030158 (change=60.411692377037696 %)
[2026-03-14 05:56:48] 2026-03-14 04:55:43,700 | INFO     | sum of square deviations: 1367709365.0
[2026-03-14 05:56:48] 2026-03-14 04:55:43,701 | INFO     | sum of deviations: -18063800344.5
[2026-03-14 05:56:48] 2026-03-14 04:55:43,702 | INFO     | mean x: 1773459102.5
[2026-03-14 05:56:48] 2026-03-14 04:55:43,702 | INFO     | mean y: 2496251.713414634
[2026-03-14 05:56:48] 2026-03-14 04:55:43,702 | INFO     | intersect: 23425170663.75574
[2026-03-14 05:56:48] 2026-03-14 04:55:43,702 | INFO     | chi2: 0.8984111155974712
[2026-03-14 05:56:48] 2026-03-14 04:55:43,702 | INFO     | current chi2=0.8984111155974712 (change=1.723181008143779 %)
[2026-03-14 05:56:48] 2026-03-14 04:55:43,703 | INFO     | left removable region: 20
[2026-03-14 05:56:48] 2026-03-14 04:55:43,703 | INFO     | sum of square deviations: 906703512.0
[2026-03-14 05:56:48] 2026-03-14 04:55:43,704 | INFO     | sum of deviations: 1527015317.9999998
[2026-03-14 05:56:48] 2026-03-14 04:55:43,704 | INFO     | mean x: 1773459072.0
[2026-03-14 05:56:48] 2026-03-14 04:55:43,704 | INFO     | mean y: 2498859.6643356644
[2026-03-14 05:56:48] 2026-03-14 04:55:43,704 | INFO     | intersect: -2984253847.200733
[2026-03-14 05:56:48] 2026-03-14 04:55:43,705 | INFO     | chi2: 0.00026484628795079386
[2026-03-14 05:56:48] 2026-03-14 04:55:43,705 | INFO     | current memory leak: 1.68 B/s (using 143 data points, chi2=0.00)
[2026-03-14 05:56:48] 2026-03-14 04:55:43,705 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-03-14 05:56:48] 2026-03-14 04:55:43,706 | INFO     | ..............................
[2026-03-14 05:56:48] 2026-03-14 04:55:43,706 | INFO     | . Timing measurements:
[2026-03-14 05:56:48] 2026-03-14 04:55:43,706 | INFO     | . get job = 0 s
[2026-03-14 05:56:48] 2026-03-14 04:55:43,706 | INFO     | . initial setup = 9 s
[2026-03-14 05:56:48] 2026-03-14 04:55:43,706 | INFO     | . payload setup = 9 s
[2026-03-14 05:56:48] 2026-03-14 04:55:43,706 | INFO     | . stage-in = 0 s
[2026-03-14 05:56:48] 2026-03-14 04:55:43,706 | INFO     | . payload execution = 10622 s
[2026-03-14 05:56:48] 2026-03-14 04:55:43,706 | INFO     | . stage-out = 3 s
[2026-03-14 05:56:48] 2026-03-14 04:55:43,707 | INFO     | . log creation = 1 s
[2026-03-14 05:56:48] 2026-03-14 04:55:43,707 | INFO     | ..............................
[2026-03-14 05:56:48] 2026-03-14 04:55:43,849 | INFO     | 
[2026-03-14 05:56:48] 2026-03-14 04:55:43,849 | INFO     | job summary report
[2026-03-14 05:56:48] 2026-03-14 04:55:43,850 | INFO     | --------------------------------------------------
[2026-03-14 05:56:48] 2026-03-14 04:55:43,850 | INFO     | PanDA job id: 7044333844
[2026-03-14 05:56:48] 2026-03-14 04:55:43,850 | INFO     | task id: 48955010
[2026-03-14 05:56:48] 2026-03-14 04:55:43,850 | INFO     | errors: (none)
[2026-03-14 05:56:48] 2026-03-14 04:55:43,850 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 05:56:48] 2026-03-14 04:55:43,850 | INFO     | pilot state: finished 
[2026-03-14 05:56:48] 2026-03-14 04:55:43,850 | INFO     | transexitcode: 0
[2026-03-14 05:56:48] 2026-03-14 04:55:43,850 | INFO     | exeerrorcode: 0
[2026-03-14 05:56:48] 2026-03-14 04:55:43,850 | INFO     | exeerrordiag: 
[2026-03-14 05:56:48] 2026-03-14 04:55:43,851 | INFO     | exitcode: 0
[2026-03-14 05:56:48] 2026-03-14 04:55:43,851 | INFO     | exitmsg: OK
[2026-03-14 05:56:48] 2026-03-14 04:55:43,851 | INFO     | cpuconsumptiontime: 51181 s
[2026-03-14 05:56:48] 2026-03-14 04:55:43,851 | INFO     | nevents: 400
[2026-03-14 05:56:48] 2026-03-14 04:55:43,851 | INFO     | neventsw: 0
[2026-03-14 05:56:48] 2026-03-14 04:55:43,851 | INFO     | pid: 31095
[2026-03-14 05:56:48] 2026-03-14 04:55:43,851 | INFO     | pgrp: 31095
[2026-03-14 05:56:48] 2026-03-14 04:55:43,851 | INFO     | corecount: 8
[2026-03-14 05:56:48] 2026-03-14 04:55:43,851 | INFO     | event service: False
[2026-03-14 05:56:48] 2026-03-14 04:55:43,851 | INFO     | sizes: {0: 2279087, 1: 2280206, 2: 2280206, 10635: 2309371, 10639: 2318371, 10641: 2318813}
[2026-03-14 05:56:48] 2026-03-14 04:55:43,852 | INFO     | --------------------------------------------------
[2026-03-14 05:56:48] 2026-03-14 04:55:43,852 | INFO     | 
[2026-03-14 05:56:48] 2026-03-14 04:55:43,852 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2026-03-14 05:56:48] 2026-03-14 04:55:44,234 | INFO     | time since job start (10643s) is within the limit (345600.0s)
[2026-03-14 05:56:48] 2026-03-14 04:55:44,286 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 05:56:48] 2026-03-14 04:55:44,286 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 05:56:48] 2026-03-14 04:55:44,286 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 05:56:48] 2026-03-14 04:55:44,286 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 05:56:48] 2026-03-14 04:55:44,286 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 05:56:48] 2026-03-14 04:55:44,286 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 05:56:48] 2026-03-14 04:55:44,287 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 05:56:48] 2026-03-14 04:55:44,287 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 05:56:48] 2026-03-14 04:55:44,287 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 05:56:48] 2026-03-14 04:55:44,287 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 05:56:48] 2026-03-14 04:55:44,287 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 05:56:48] 2026-03-14 04:55:44,287 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 05:56:48] 2026-03-14 04:55:44,287 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 05:56:48] 2026-03-14 04:55:44,287 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 05:56:48] 2026-03-14 04:55:44,287 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 05:56:48] 2026-03-14 04:55:44,288 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 05:56:48] 2026-03-14 04:55:44,288 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 05:56:48] 2026-03-14 04:55:44,288 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 05:56:48] 2026-03-14 04:55:44,288 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 05:56:48] 2026-03-14 04:55:44,288 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 05:56:48] 2026-03-14 04:55:44,288 | INFO     | job 7044333844 has completed (purged errors)
[2026-03-14 05:56:48] 2026-03-14 04:55:44,288 | INFO     | overall cleanup function is called
[2026-03-14 05:56:48] 2026-03-14 04:55:45,297 | INFO     | --- collectZombieJob: --- 10, [31095]
[2026-03-14 05:56:48] 2026-03-14 04:55:45,297 | INFO     | zombie collector waiting for pid 31095
[2026-03-14 05:56:48] 2026-03-14 04:55:45,297 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 05:56:48] 2026-03-14 04:55:45,297 | INFO     | collected zombie processes
[2026-03-14 05:56:48] 2026-03-14 04:55:45,297 | INFO     | will attempt to kill all subprocesses of pid=31095
[2026-03-14 05:56:48] 2026-03-14 04:55:45,380 | INFO     | process IDs to be killed: [31095] (in reverse order)
[2026-03-14 05:56:48] 2026-03-14 04:55:46,147 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 05:56:48] 2026-03-14 04:55:46,148 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 05:56:48] 2026-03-14 04:55:46,150 | INFO     | did not find any defunct processes belonging to 31095
[2026-03-14 05:56:48] 2026-03-14 04:55:46,152 | INFO     | did not find any defunct processes belonging to 31095
[2026-03-14 05:56:48] 2026-03-14 04:55:46,152 | INFO     | ready for new job
[2026-03-14 05:56:48] 2026-03-14 04:55:46,152 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 05:56:48] 2026-03-14 04:55:46,154 | INFO     | **************************************
[2026-03-14 05:56:48] 2026-03-14 04:55:46,155 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 05:56:48] 2026-03-14 04:55:46,155 | INFO     | **************************************
[2026-03-14 05:56:48] 2026-03-14 04:55:46,155 | INFO     | 
[2026-03-14 05:56:48] 2026-03-14 04:55:46,155 | INFO     | pilot is running in a VM
[2026-03-14 05:56:48] 2026-03-14 04:55:46,156 | INFO     | architecture information:
[2026-03-14 05:56:48] 2026-03-14 04:55:46,157 | INFO     | executing command: cat /etc/os-release
[2026-03-14 05:56:48] 2026-03-14 04:55:46,452 | INFO     | cat /etc/os-release:
[2026-03-14 05:56:48] NAME="CentOS Linux"
[2026-03-14 05:56:48] VERSION="7 (Core)"
[2026-03-14 05:56:48] ID="centos"
[2026-03-14 05:56:48] ID_LIKE="rhel fedora"
[2026-03-14 05:56:48] VERSION_ID="7"
[2026-03-14 05:56:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 05:56:48] ANSI_COLOR="0;31"
[2026-03-14 05:56:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 05:56:48] HOME_URL="https://www.centos.org/"
[2026-03-14 05:56:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 05:56:48] 
[2026-03-14 05:56:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 05:56:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 05:56:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 05:56:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 05:56:48] 
[2026-03-14 05:56:48] 2026-03-14 04:55:46,453 | INFO     | **************************************
[2026-03-14 05:56:48] 2026-03-14 04:55:46,956 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2026-03-14 05:56:48] 2026-03-14 04:55:47,264 | INFO     | sufficient remaining disk space (495845376000 B)
[2026-03-14 05:56:48] 2026-03-14 04:55:47,265 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 05:56:48] 2026-03-14 04:55:47,265 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 05:56:48] 2026-03-14 04:55:47,265 | INFO     | update_server=False
[2026-03-14 05:56:48] 2026-03-14 04:55:47,265 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 05:56:48] 2026-03-14 04:55:47,265 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 05:56:48] 2026-03-14 04:55:47,527 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-14 05:56:48] 2026-03-14 04:55:47,527 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-14 05:56:48] 2026-03-14 04:55:47,527 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 05:56:48] 2026-03-14 04:55:47,527 | INFO     | will abort loop
[2026-03-14 05:56:48] 2026-03-14 04:55:47,678 | INFO     | all data control threads have been joined
[2026-03-14 05:56:48] 2026-03-14 04:55:48,271 | INFO     | [job] retrieve thread has finished
[2026-03-14 05:56:48] 2026-03-14 04:55:48,421 | INFO     | [payload] failed_post thread has finished
[2026-03-14 05:56:48] 2026-03-14 04:55:48,461 | INFO     | all payload control threads have been joined
[2026-03-14 05:56:48] 2026-03-14 04:55:48,533 | INFO     | [job] job monitor thread has finished
[2026-03-14 05:56:48] 2026-03-14 04:55:48,590 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 05:56:48] 2026-03-14 04:55:48,684 | INFO     | [data] control thread has finished
[2026-03-14 05:56:48] 2026-03-14 04:55:48,781 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 05:56:48] 2026-03-14 04:55:48,797 | INFO     | all job control threads have been joined
[2026-03-14 05:56:48] 2026-03-14 04:55:48,846 | INFO     | [payload] validate_post thread has finished
[2026-03-14 05:56:48] 2026-03-14 04:55:48,870 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 05:56:48] 2026-03-14 04:55:48,977 | INFO     | [data] copytool_in thread has finished
[2026-03-14 05:56:48] 2026-03-14 04:55:49,128 | INFO     | [job] validate thread has finished
[2026-03-14 05:56:48] 2026-03-14 04:55:49,184 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 05:56:48] 2026-03-14 04:55:49,273 | INFO     | [data] copytool_out thread has finished
[2026-03-14 05:56:48] 2026-03-14 04:55:49,386 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 05:56:48] 2026-03-14 04:55:49,467 | INFO     | [payload] control thread has finished
[2026-03-14 05:56:48] 2026-03-14 04:55:49,592 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 05:56:48] 2026-03-14 04:55:49,803 | INFO     | [job] control thread has finished
[2026-03-14 05:56:48] 2026-03-14 04:55:49,876 | INFO     | [job] queue monitor thread has finished
[2026-03-14 05:56:48] 2026-03-14 04:55:53,601 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 05:56:48] 2026-03-14 04:56:17,395 | INFO     | PID=26655 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-14 05:56:48] 2026-03-14 04:56:17,395 | INFO     | .. there are 2 such processes running
[2026-03-14 05:56:48] 2026-03-14 04:56:17,395 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 05:56:48] 2026-03-14 04:56:17,395 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 05:56:48] 2026-03-14 04:56:17,395 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 05:56:48] 2026-03-14 04:56:39,017 | INFO     | [monitor] cgroup control has ended
[2026-03-14 05:56:48] 2026-03-14 04:56:39,430 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140273008379712)>', '<ExcThread(monitor, started 140271677335296)>']
[2026-03-14 05:56:48] 2026-03-14 04:56:39,526 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 05:56:48] 2026-03-14 04:56:39,526 | INFO     | [monitor] control thread has ended
[2026-03-14 05:56:48] 2026-03-14 04:56:44,456 | INFO     | all workflow threads have been joined
[2026-03-14 05:56:48] 2026-03-14 04:56:44,456 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 05:56:48] 2026-03-14 04:56:44,456 | INFO     | traces error code: 0
[2026-03-14 05:56:48] 2026-03-14 04:56:44,457 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 05:56:48] 2026-03-14 04:56:44,731 [wrapper] ==== pilot stdout END ====
[2026-03-14 05:56:48] 2026-03-14 04:56:44,790 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 05:56:48] 2026-03-14 04:56:44,887 [wrapper] pilotpid: 26655
[2026-03-14 05:56:48] 2026-03-14 04:56:44,946 [wrapper] Pilot exit status: 0
[2026-03-14 05:56:48] 2026-03-14 04:56:45,413 [wrapper] pandaids: 7044333844
[2026-03-14 05:56:48] 2026-03-14 04:56:46,158 [wrapper] cleanup supervisor_pilot 20163 26656
[2026-03-14 05:56:48] 2026-03-14 04:56:46,276 [wrapper] Test setup, not cleaning
[2026-03-14 05:56:48] 2026-03-14 04:56:46,420 [wrapper] apfmon messages muted
[2026-03-14 05:56:48] 2026-03-14 04:56:46,515 [wrapper] ==== wrapper stdout END ====
[2026-03-14 05:56:48] 2026-03-14 04:56:46,628 [wrapper] ==== wrapper stderr END ====
[2026-03-14 05:56:48]  *** Error codes and diagnostics ***
[2026-03-14 05:56:48]     "exeErrorCode": 0,
[2026-03-14 05:56:48]     "exeErrorDiag": "",
[2026-03-14 05:56:48]     "pilotErrorCode": 0,
[2026-03-14 05:56:48]     "pilotErrorDiag": "",
[2026-03-14 05:56:48]  *** Listing of results directory ***
[2026-03-14 05:56:48] total 614400
[2026-03-14 05:56:48] -rwx------. 1 boinc boinc     36322 Mar 13 14:59 runpilot2-wrapper.sh
[2026-03-14 05:56:48] -rw-r--r--. 1 boinc boinc      5111 Mar 13 14:59 queuedata.json
[2026-03-14 05:56:48] -rw-r--r--. 1 boinc boinc    585013 Mar 13 14:59 pilot3.tar.gz
[2026-03-14 05:56:48] -rw-r--r--. 1 boinc boinc       100 Mar 14 02:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 05:56:48] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 02:57 run_atlas
[2026-03-14 05:56:48] -rw-r--r--. 1 boinc boinc       105 Mar 14 02:57 job.xml
[2026-03-14 05:56:48] -rw-r--r--. 2 boinc boinc 438313907 Mar 14 02:57 EVNT.46701403._001620.pool.root.1
[2026-03-14 05:56:48] -rw-r--r--. 1 boinc boinc      6392 Mar 14 02:57 init_data.xml
[2026-03-14 05:56:48] -rw-r--r--. 2 boinc boinc     15845 Mar 14 02:57 start_atlas.sh
[2026-03-14 05:56:48] drwxrwx--x. 2 boinc boinc        68 Mar 14 02:57 shared
[2026-03-14 05:56:48] -rw-r--r--. 2 boinc boinc    597515 Mar 14 02:57 input.tar.gz
[2026-03-14 05:56:48] -rw-r--r--. 1 boinc boinc         0 Mar 14 02:57 boinc_lockfile
[2026-03-14 05:56:48] -rw-r--r--. 1 boinc boinc      2562 Mar 14 02:57 pandaJob.out
[2026-03-14 05:56:48] -rw-------. 1 boinc boinc   1006713 Mar 14 02:58 agis_schedconf.cvmfs.json
[2026-03-14 05:56:48] -rw-------. 1 boinc boinc   1511579 Mar 14 02:58 agis_ddmendpoints.agis.ALL.json
[2026-03-14 05:56:48] -rw-------. 1 boinc boinc       415 Mar 14 02:58 workernode_map.json
[2026-03-14 05:56:48] drwx------. 5 boinc boinc      4096 Mar 14 02:58 pilot3
[2026-03-14 05:56:48] -rw-------. 1 boinc boinc 183099568 Mar 14 05:54 HITS.48955010._031258.pool.root.1
[2026-03-14 05:56:48] -rw-r--r--. 1 boinc boinc       531 Mar 14 05:54 boinc_task_state.xml
[2026-03-14 05:56:48] -rw-------. 1 boinc boinc        95 Mar 14 05:55 pilot_heartbeat.json
[2026-03-14 05:56:48] -rw-------. 1 boinc boinc      1022 Mar 14 05:55 memory_monitor_summary.json
[2026-03-14 05:56:48] -rw-------. 1 boinc boinc    396832 Mar 14 05:55 log.48955010._031258.job.log.tgz.1
[2026-03-14 05:56:48] -rw-------. 1 boinc boinc      6323 Mar 14 05:55 heartbeat.json
[2026-03-14 05:56:48] -rw-r--r--. 1 boinc boinc      8192 Mar 14 05:56 boinc_mmap_file
[2026-03-14 05:56:48] -rw-r--r--. 1 boinc boinc        28 Mar 14 05:56 wrapper_checkpoint.txt
[2026-03-14 05:56:48] -rw-------. 1 boinc boinc      5067 Mar 14 05:56 pilotlog.txt
[2026-03-14 05:56:48] -rw-------. 1 boinc boinc   1507173 Mar 14 05:56 log.48955010._031258.job.log.1
[2026-03-14 05:56:48] -rw-------. 1 boinc boinc       357 Mar 14 05:56 output.list
[2026-03-14 05:56:48] -rw-r--r--. 1 boinc boinc       620 Mar 14 05:56 runtime_log
[2026-03-14 05:56:48] -rw-------. 1 boinc boinc   1925120 Mar 14 05:56 result.tar.gz
[2026-03-14 05:56:48] -rw-r--r--. 1 boinc boinc      8832 Mar 14 05:56 runtime_log.err
[2026-03-14 05:56:48] -rw-------. 1 boinc boinc       654 Mar 14 05:56 B9kNDmVEIL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmrfpLDmHooWFm.diag
[2026-03-14 05:56:48] -rw-r--r--. 1 boinc boinc     20718 Mar 14 05:56 stderr.txt
[2026-03-14 05:56:49] HITS file was successfully produced:
[2026-03-14 05:56:49] -rw-------. 1 boinc boinc 183099568 Mar 14 05:54 shared/HITS.pool.root.1
[2026-03-14 05:56:49]  *** Contents of shared directory: ***
[2026-03-14 05:56:49] total 609336
[2026-03-14 05:56:49] -rw-r--r--. 2 boinc boinc 438313907 Mar 14 02:57 ATLAS.root_0
[2026-03-14 05:56:49] -rw-r--r--. 2 boinc boinc     15845 Mar 14 02:57 start_atlas.sh
[2026-03-14 05:56:49] -rw-r--r--. 2 boinc boinc    597515 Mar 14 02:57 input.tar.gz
[2026-03-14 05:56:49] -rw-------. 1 boinc boinc 183099568 Mar 14 05:54 HITS.pool.root.1
[2026-03-14 05:56:49] -rw-------. 1 boinc boinc   1925120 Mar 14 05:56 result.tar.gz
05:56:50 (22782): run_atlas exited; CPU time 51277.139278
05:56:50 (22782): called boinc_finish(0)

</stderr_txt>
]]>

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