Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:45:17 (16239): wrapper (7.7.26015): starting
08:45:17 (16239): wrapper: running run_atlas (--nthreads 8)
[2026-03-14 08:45:17] Arguments: --nthreads 8
[2026-03-14 08:45:17] Threads: 8
[2026-03-14 08:45:17] Checking for CVMFS
[2026-03-14 08:45:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 08:45:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 08:45:21] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 08:45:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 08:45:22] 2.11.2.0 5913 127275 138952 157270 0 53 18208272 25165825 4784 130560 152 45793941 99.812 36982698 1159 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-14 08:45:22] CVMFS is ok
[2026-03-14 08:45:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 08:45:22] Checking for apptainer binary...
[2026-03-14 08:45:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 08:45:22] Running /usr/bin/apptainer --version
[2026-03-14 08:45:22] apptainer version 1.3.2-1.el7
[2026-03-14 08:45:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 08:45:47] cg-vwn443.simple-grid.lan
[2026-03-14 08:45:47] apptainer works
[2026-03-14 08:45:47] Set ATHENA_PROC_NUMBER=8
[2026-03-14 08:45:47] Set ATHENA_CORE_NUMBER=8
[2026-03-14 08:45:47] Starting ATLAS job with PandaID=7044119565
[2026-03-14 08:45:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 12:38:27]  *** The last 200 lines of the pilot log: ***
[2026-03-14 12:38:27] 2026-03-14 11:37:31,330 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-7044119565/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 12:38:27] 2026-03-14 11:37:31,331 | INFO     | extracted standard info from prmon json
[2026-03-14 12:38:27] 2026-03-14 11:37:31,331 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 12:38:27] 2026-03-14 11:37:31,331 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 12:38:27] 2026-03-14 11:37:31,331 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 12:38:27] 2026-03-14 11:37:31,331 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 12:38:27] 2026-03-14 11:37:31,336 | INFO     | fitting pss+swap vs Time
[2026-03-14 12:38:27] 2026-03-14 11:37:31,337 | INFO     | sum of square deviations: 3256879670.0
[2026-03-14 12:38:27] 2026-03-14 11:37:31,339 | INFO     | sum of deviations: 88962797537.00002
[2026-03-14 12:38:27] 2026-03-14 11:37:31,339 | INFO     | mean x: 1773481570.0
[2026-03-14 12:38:27] 2026-03-14 11:37:31,339 | INFO     | mean y: 2415692.529680365
[2026-03-14 12:38:27] 2026-03-14 11:37:31,339 | INFO     | intersect: -48440848361.960526
[2026-03-14 12:38:27] 2026-03-14 11:37:31,339 | INFO     | chi2: 6.540053334728727
[2026-03-14 12:38:27] 2026-03-14 11:37:31,340 | INFO     | sum of square deviations: 3038856977.5
[2026-03-14 12:38:27] 2026-03-14 11:37:31,342 | INFO     | sum of deviations: 101008773177.5
[2026-03-14 12:38:27] 2026-03-14 11:37:31,342 | INFO     | mean x: 1773481417.5
[2026-03-14 12:38:27] 2026-03-14 11:37:31,342 | INFO     | mean y: 2423930.855140187
[2026-03-14 12:38:27] 2026-03-14 11:37:31,342 | INFO     | intersect: -58946445187.07909
[2026-03-14 12:38:27] 2026-03-14 11:37:31,342 | INFO     | chi2: 5.824162890099176
[2026-03-14 12:38:27] 2026-03-14 11:37:31,343 | INFO     | current chi2=5.824162890099176 (change=10.94624780547367 %)
[2026-03-14 12:38:27] 2026-03-14 11:37:31,347 | INFO     | right removable region: 213
[2026-03-14 12:38:27] 2026-03-14 11:37:31,347 | INFO     | sum of square deviations: 3038856977.5
[2026-03-14 12:38:27] 2026-03-14 11:37:31,349 | INFO     | sum of deviations: 14750685475.999998
[2026-03-14 12:38:27] 2026-03-14 11:37:31,349 | INFO     | mean x: 1773481722.5
[2026-03-14 12:38:27] 2026-03-14 11:37:31,349 | INFO     | mean y: 2467549.0654205605
[2026-03-14 12:38:27] 2026-03-14 11:37:31,349 | INFO     | intersect: -8606055747.596445
[2026-03-14 12:38:27] 2026-03-14 11:37:31,350 | INFO     | chi2: 1.8569984570756435
[2026-03-14 12:38:27] 2026-03-14 11:37:31,350 | INFO     | current chi2=1.8569984570756435 (change=71.60575973876718 %)
[2026-03-14 12:38:27] 2026-03-14 11:37:31,350 | INFO     | sum of square deviations: 2830787960.0
[2026-03-14 12:38:27] 2026-03-14 11:37:31,352 | INFO     | sum of deviations: -14137225007.000002
[2026-03-14 12:38:27] 2026-03-14 11:37:31,352 | INFO     | mean x: 1773481875.0
[2026-03-14 12:38:27] 2026-03-14 11:37:31,352 | INFO     | mean y: 2488527.5693779904
[2026-03-14 12:38:27] 2026-03-14 11:37:31,352 | INFO     | intersect: 8859426124.799814
[2026-03-14 12:38:27] 2026-03-14 11:37:31,353 | INFO     | chi2: 0.8474015075868493
[2026-03-14 12:38:27] 2026-03-14 11:37:31,353 | INFO     | current chi2=0.8474015075868493 (change=54.36713992098212 %)
[2026-03-14 12:38:27] 2026-03-14 11:37:31,353 | INFO     | sum of square deviations: 2632440055.0
[2026-03-14 12:38:27] 2026-03-14 11:37:31,355 | INFO     | sum of deviations: -12798373522.0
[2026-03-14 12:38:27] 2026-03-14 11:37:31,355 | INFO     | mean x: 1773482027.5
[2026-03-14 12:38:27] 2026-03-14 11:37:31,355 | INFO     | mean y: 2487457.794117647
[2026-03-14 12:38:27] 2026-03-14 11:37:31,356 | INFO     | intersect: 8624786521.88387
[2026-03-14 12:38:27] 2026-03-14 11:37:31,356 | INFO     | chi2: 0.8317920583741857
[2026-03-14 12:38:27] 2026-03-14 11:37:31,356 | INFO     | current chi2=0.8317920583741857 (change=1.8420369887132648 %)
[2026-03-14 12:38:27] 2026-03-14 11:37:31,356 | INFO     | left removable region: 30
[2026-03-14 12:38:27] 2026-03-14 11:37:31,357 | INFO     | sum of square deviations: 1900284932.0
[2026-03-14 12:38:27] 2026-03-14 11:37:31,358 | INFO     | sum of deviations: 4082554441.999996
[2026-03-14 12:38:27] 2026-03-14 11:37:31,358 | INFO     | mean x: 1773482302.0
[2026-03-14 12:38:27] 2026-03-14 11:37:31,358 | INFO     | mean y: 2495276.081967213
[2026-03-14 12:38:27] 2026-03-14 11:37:31,358 | INFO     | intersect: -3807637577.1097975
[2026-03-14 12:38:27] 2026-03-14 11:37:31,359 | INFO     | chi2: 0.0006651438935895227
[2026-03-14 12:38:27] 2026-03-14 11:37:31,359 | INFO     | current memory leak: 2.15 B/s (using 183 data points, chi2=0.00)
[2026-03-14 12:38:27] 2026-03-14 11:37:31,360 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-03-14 12:38:27] 2026-03-14 11:37:31,360 | INFO     | ..............................
[2026-03-14 12:38:27] 2026-03-14 11:37:31,360 | INFO     | . Timing measurements:
[2026-03-14 12:38:27] 2026-03-14 11:37:31,360 | INFO     | . get job = 0 s
[2026-03-14 12:38:27] 2026-03-14 11:37:31,360 | INFO     | . initial setup = 103 s
[2026-03-14 12:38:27] 2026-03-14 11:37:31,360 | INFO     | . payload setup = 130 s
[2026-03-14 12:38:27] 2026-03-14 11:37:31,360 | INFO     | . stage-in = 0 s
[2026-03-14 12:38:27] 2026-03-14 11:37:31,361 | INFO     | . payload execution = 13438 s
[2026-03-14 12:38:27] 2026-03-14 11:37:31,361 | INFO     | . stage-out = 4 s
[2026-03-14 12:38:27] 2026-03-14 11:37:31,361 | INFO     | . log creation = 1 s
[2026-03-14 12:38:27] 2026-03-14 11:37:31,361 | INFO     | ..............................
[2026-03-14 12:38:27] 2026-03-14 11:37:31,374 | INFO     | time since job start (13596s) is within the limit (345600.0s)
[2026-03-14 12:38:27] 2026-03-14 11:37:31,503 | INFO     | 
[2026-03-14 12:38:27] 2026-03-14 11:37:31,504 | INFO     | job summary report
[2026-03-14 12:38:27] 2026-03-14 11:37:31,504 | INFO     | --------------------------------------------------
[2026-03-14 12:38:27] 2026-03-14 11:37:31,504 | INFO     | PanDA job id: 7044119565
[2026-03-14 12:38:27] 2026-03-14 11:37:31,504 | INFO     | task id: 48955010
[2026-03-14 12:38:27] 2026-03-14 11:37:31,504 | INFO     | errors: (none)
[2026-03-14 12:38:27] 2026-03-14 11:37:31,504 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 12:38:27] 2026-03-14 11:37:31,504 | INFO     | pilot state: finished 
[2026-03-14 12:38:27] 2026-03-14 11:37:31,504 | INFO     | transexitcode: 0
[2026-03-14 12:38:27] 2026-03-14 11:37:31,504 | INFO     | exeerrorcode: 0
[2026-03-14 12:38:27] 2026-03-14 11:37:31,505 | INFO     | exeerrordiag: 
[2026-03-14 12:38:27] 2026-03-14 11:37:31,505 | INFO     | exitcode: 0
[2026-03-14 12:38:27] 2026-03-14 11:37:31,505 | INFO     | exitmsg: OK
[2026-03-14 12:38:27] 2026-03-14 11:37:31,505 | INFO     | cpuconsumptiontime: 51145 s
[2026-03-14 12:38:27] 2026-03-14 11:37:31,505 | INFO     | nevents: 400
[2026-03-14 12:38:27] 2026-03-14 11:37:31,505 | INFO     | neventsw: 0
[2026-03-14 12:38:27] 2026-03-14 11:37:31,505 | INFO     | pid: 24802
[2026-03-14 12:38:27] 2026-03-14 11:37:31,505 | INFO     | pgrp: 24802
[2026-03-14 12:38:27] 2026-03-14 11:37:31,505 | INFO     | corecount: 8
[2026-03-14 12:38:27] 2026-03-14 11:37:31,506 | INFO     | event service: False
[2026-03-14 12:38:27] 2026-03-14 11:37:31,506 | INFO     | sizes: {0: 2279089, 1: 2279774, 2: 2280235, 13: 2280235, 13573: 2310408, 13578: 2319406, 13581: 2319590, 13583: 2319784}
[2026-03-14 12:38:27] 2026-03-14 11:37:31,506 | INFO     | --------------------------------------------------
[2026-03-14 12:38:27] 2026-03-14 11:37:31,506 | INFO     | 
[2026-03-14 12:38:27] 2026-03-14 11:37:31,506 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2026-03-14 12:38:27] 2026-03-14 11:37:31,984 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 12:38:27] 2026-03-14 11:37:31,985 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 12:38:27] 2026-03-14 11:37:31,985 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 12:38:27] 2026-03-14 11:37:31,985 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 12:38:27] 2026-03-14 11:37:31,985 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 12:38:27] 2026-03-14 11:37:31,985 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 12:38:27] 2026-03-14 11:37:31,985 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 12:38:27] 2026-03-14 11:37:31,985 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 12:38:27] 2026-03-14 11:37:31,986 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 12:38:27] 2026-03-14 11:37:31,986 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 12:38:27] 2026-03-14 11:37:31,986 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 12:38:27] 2026-03-14 11:37:31,986 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 12:38:27] 2026-03-14 11:37:31,986 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 12:38:27] 2026-03-14 11:37:31,986 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 12:38:27] 2026-03-14 11:37:31,986 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 12:38:27] 2026-03-14 11:37:31,986 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 12:38:27] 2026-03-14 11:37:31,987 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 12:38:27] 2026-03-14 11:37:31,987 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 12:38:27] 2026-03-14 11:37:31,987 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 12:38:27] 2026-03-14 11:37:31,987 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 12:38:27] 2026-03-14 11:37:31,987 | INFO     | job 7044119565 has completed (purged errors)
[2026-03-14 12:38:27] 2026-03-14 11:37:31,987 | INFO     | overall cleanup function is called
[2026-03-14 12:38:27] 2026-03-14 11:37:32,996 | INFO     | --- collectZombieJob: --- 10, [24802]
[2026-03-14 12:38:27] 2026-03-14 11:37:32,996 | INFO     | zombie collector waiting for pid 24802
[2026-03-14 12:38:27] 2026-03-14 11:37:32,996 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 12:38:27] 2026-03-14 11:37:32,996 | INFO     | collected zombie processes
[2026-03-14 12:38:27] 2026-03-14 11:37:32,996 | INFO     | will attempt to kill all subprocesses of pid=24802
[2026-03-14 12:38:27] 2026-03-14 11:37:33,142 | INFO     | process IDs to be killed: [24802] (in reverse order)
[2026-03-14 12:38:27] 2026-03-14 11:37:33,760 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 12:38:27] 2026-03-14 11:37:33,761 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 12:38:27] 2026-03-14 11:37:33,764 | INFO     | did not find any defunct processes belonging to 24802
[2026-03-14 12:38:27] 2026-03-14 11:37:33,767 | INFO     | did not find any defunct processes belonging to 24802
[2026-03-14 12:38:27] 2026-03-14 11:37:33,768 | INFO     | ready for new job
[2026-03-14 12:38:27] 2026-03-14 11:37:33,768 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 12:38:27] 2026-03-14 11:37:33,770 | INFO     | **************************************
[2026-03-14 12:38:27] 2026-03-14 11:37:33,770 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 12:38:27] 2026-03-14 11:37:33,770 | INFO     | **************************************
[2026-03-14 12:38:27] 2026-03-14 11:37:33,770 | INFO     | 
[2026-03-14 12:38:27] 2026-03-14 11:37:33,771 | INFO     | pilot is running in a VM
[2026-03-14 12:38:27] 2026-03-14 11:37:33,771 | INFO     | architecture information:
[2026-03-14 12:38:27] 2026-03-14 11:37:33,774 | INFO     | executing command: cat /etc/os-release
[2026-03-14 12:38:27] 2026-03-14 11:37:33,981 | INFO     | cat /etc/os-release:
[2026-03-14 12:38:27] NAME="CentOS Linux"
[2026-03-14 12:38:27] VERSION="7 (Core)"
[2026-03-14 12:38:27] ID="centos"
[2026-03-14 12:38:27] ID_LIKE="rhel fedora"
[2026-03-14 12:38:27] VERSION_ID="7"
[2026-03-14 12:38:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 12:38:27] ANSI_COLOR="0;31"
[2026-03-14 12:38:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 12:38:27] HOME_URL="https://www.centos.org/"
[2026-03-14 12:38:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 12:38:27] 
[2026-03-14 12:38:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 12:38:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 12:38:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 12:38:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 12:38:27] 
[2026-03-14 12:38:27] 2026-03-14 11:37:33,982 | INFO     | **************************************
[2026-03-14 12:38:27] 2026-03-14 11:37:34,485 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2026-03-14 12:38:27] 2026-03-14 11:37:34,740 | INFO     | sufficient remaining disk space (495308505088 B)
[2026-03-14 12:38:27] 2026-03-14 11:37:34,741 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 12:38:27] 2026-03-14 11:37:34,741 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 12:38:27] 2026-03-14 11:37:34,741 | INFO     | update_server=False
[2026-03-14 12:38:27] 2026-03-14 11:37:34,741 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 12:38:27] 2026-03-14 11:37:34,857 | INFO     | all data control threads have been joined
[2026-03-14 12:38:27] 2026-03-14 11:37:35,014 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 12:38:27] 2026-03-14 11:37:35,030 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-14 12:38:27] 2026-03-14 11:37:35,030 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-14 12:38:27] 2026-03-14 11:37:35,030 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 12:38:27] 2026-03-14 11:37:35,030 | INFO     | will abort loop
[2026-03-14 12:38:27] 2026-03-14 11:37:35,527 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 12:38:27] 2026-03-14 11:37:35,747 | INFO     | [job] retrieve thread has finished
[2026-03-14 12:38:27] 2026-03-14 11:37:35,773 | INFO     | all job control threads have been joined
[2026-03-14 12:38:27] 2026-03-14 11:37:35,863 | INFO     | [data] control thread has finished
[2026-03-14 12:38:27] 2026-03-14 11:37:35,870 | INFO     | all payload control threads have been joined
[2026-03-14 12:38:27] 2026-03-14 11:37:36,035 | INFO     | [job] job monitor thread has finished
[2026-03-14 12:38:27] 2026-03-14 11:37:36,394 | INFO     | [job] validate thread has finished
[2026-03-14 12:38:27] 2026-03-14 11:37:36,521 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 12:38:27] 2026-03-14 11:37:36,588 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 12:38:27] 2026-03-14 11:37:36,599 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 12:38:27] 2026-03-14 11:37:36,779 | INFO     | [job] control thread has finished
[2026-03-14 12:38:27] 2026-03-14 11:37:36,795 | INFO     | [payload] validate_post thread has finished
[2026-03-14 12:38:27] 2026-03-14 11:37:36,876 | INFO     | [payload] control thread has finished
[2026-03-14 12:38:27] 2026-03-14 11:37:36,896 | INFO     | [data] copytool_in thread has finished
[2026-03-14 12:38:27] 2026-03-14 11:37:36,975 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 12:38:27] 2026-03-14 11:37:37,020 | INFO     | [data] copytool_out thread has finished
[2026-03-14 12:38:27] 2026-03-14 11:37:37,133 | INFO     | [payload] failed_post thread has finished
[2026-03-14 12:38:27] 2026-03-14 11:37:37,187 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 12:38:27] 2026-03-14 11:37:37,527 | INFO     | [job] queue monitor thread has finished
[2026-03-14 12:38:27] 2026-03-14 11:37:39,536 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 12:38:27] 2026-03-14 11:38:04,579 | INFO     | PID=20316 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-14 12:38:27] 2026-03-14 11:38:04,579 | INFO     | .. there are 9 such processes running
[2026-03-14 12:38:27] 2026-03-14 11:38:04,579 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 12:38:27] 2026-03-14 11:38:04,579 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 12:38:27] 2026-03-14 11:38:04,579 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 12:38:27] 2026-03-14 11:38:18,420 | INFO     | [monitor] cgroup control has ended
[2026-03-14 12:38:27] 2026-03-14 11:38:19,612 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139772363822912)>', '<ExcThread(monitor, started 139771624011520)>']
[2026-03-14 12:38:27] 2026-03-14 11:38:19,668 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 12:38:27] 2026-03-14 11:38:19,668 | INFO     | [monitor] control thread has ended
[2026-03-14 12:38:27] 2026-03-14 11:38:24,638 | INFO     | all workflow threads have been joined
[2026-03-14 12:38:27] 2026-03-14 11:38:24,638 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 12:38:27] 2026-03-14 11:38:24,638 | INFO     | traces error code: 0
[2026-03-14 12:38:27] 2026-03-14 11:38:24,639 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 12:38:27] 2026-03-14 11:38:24,956 [wrapper] ==== pilot stdout END ====
[2026-03-14 12:38:27] 2026-03-14 11:38:25,010 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 12:38:27] 2026-03-14 11:38:25,100 [wrapper] pilotpid: 20316
[2026-03-14 12:38:27] 2026-03-14 11:38:25,198 [wrapper] Pilot exit status: 0
[2026-03-14 12:38:27] 2026-03-14 11:38:25,495 [wrapper] pandaids: 7044119565
[2026-03-14 12:38:27] 2026-03-14 11:38:25,799 [wrapper] cleanup supervisor_pilot 32721 20317
[2026-03-14 12:38:27] 2026-03-14 11:38:25,870 [wrapper] Test setup, not cleaning
[2026-03-14 12:38:27] 2026-03-14 11:38:25,926 [wrapper] apfmon messages muted
[2026-03-14 12:38:27] 2026-03-14 11:38:25,964 [wrapper] ==== wrapper stdout END ====
[2026-03-14 12:38:27] 2026-03-14 11:38:26,009 [wrapper] ==== wrapper stderr END ====
[2026-03-14 12:38:27]  *** Error codes and diagnostics ***
[2026-03-14 12:38:27]     "exeErrorCode": 0,
[2026-03-14 12:38:27]     "exeErrorDiag": "",
[2026-03-14 12:38:27]     "pilotErrorCode": 0,
[2026-03-14 12:38:27]     "pilotErrorDiag": "",
[2026-03-14 12:38:27]  *** Listing of results directory ***
[2026-03-14 12:38:27] total 615336
[2026-03-14 12:38:27] -rw-r--r--. 1 boinc boinc    585013 Mar 13 13:53 pilot3.tar.gz
[2026-03-14 12:38:27] -rwx------. 1 boinc boinc     36322 Mar 13 14:11 runpilot2-wrapper.sh
[2026-03-14 12:38:27] -rw-r--r--. 1 boinc boinc      5111 Mar 13 14:13 queuedata.json
[2026-03-14 12:38:27] -rw-r--r--. 1 boinc boinc       100 Mar 14 08:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 12:38:27] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 08:45 run_atlas
[2026-03-14 12:38:27] -rw-r--r--. 1 boinc boinc       105 Mar 14 08:45 job.xml
[2026-03-14 12:38:27] -rw-r--r--. 2 boinc boinc 440949889 Mar 14 08:45 EVNT.46701403._001611.pool.root.1
[2026-03-14 12:38:27] -rw-r--r--. 2 boinc boinc     15845 Mar 14 08:45 start_atlas.sh
[2026-03-14 12:38:27] drwxrwx--x. 2 boinc boinc        68 Mar 14 08:45 shared
[2026-03-14 12:38:27] -rw-r--r--. 2 boinc boinc    597529 Mar 14 08:45 input.tar.gz
[2026-03-14 12:38:27] -rw-r--r--. 1 boinc boinc      6390 Mar 14 08:45 init_data.xml
[2026-03-14 12:38:27] -rw-r--r--. 1 boinc boinc         0 Mar 14 08:45 boinc_lockfile
[2026-03-14 12:38:27] -rw-r--r--. 1 boinc boinc      2563 Mar 14 08:45 pandaJob.out
[2026-03-14 12:38:27] -rw-------. 1 boinc boinc       415 Mar 14 08:50 workernode_map.json
[2026-03-14 12:38:27] -rw-------. 1 boinc boinc   1004579 Mar 14 08:50 agis_schedconf.cvmfs.json
[2026-03-14 12:38:27] drwx------. 5 boinc boinc      4096 Mar 14 08:50 pilot3
[2026-03-14 12:38:27] -rw-------. 1 boinc boinc 180536451 Mar 14 12:36 HITS.48955010._030809.pool.root.1
[2026-03-14 12:38:27] -rw-r--r--. 1 boinc boinc       532 Mar 14 12:36 boinc_task_state.xml
[2026-03-14 12:38:27] -rw-------. 1 boinc boinc      1013 Mar 14 12:37 memory_monitor_summary.json
[2026-03-14 12:38:27] -rw-------. 1 boinc boinc   1511579 Mar 14 12:37 agis_ddmendpoints.agis.ALL.json
[2026-03-14 12:38:27] -rw-------. 1 boinc boinc    444223 Mar 14 12:37 log.48955010._030809.job.log.tgz.1
[2026-03-14 12:38:27] -rw-------. 1 boinc boinc      6317 Mar 14 12:37 heartbeat.json
[2026-03-14 12:38:27] -rw-------. 1 boinc boinc        95 Mar 14 12:37 pilot_heartbeat.json
[2026-03-14 12:38:27] -rw-r--r--. 1 boinc boinc        28 Mar 14 12:38 wrapper_checkpoint.txt
[2026-03-14 12:38:27] -rw-r--r--. 1 boinc boinc      8192 Mar 14 12:38 boinc_mmap_file
[2026-03-14 12:38:27] -rw-------. 1 boinc boinc      5066 Mar 14 12:38 pilotlog.txt
[2026-03-14 12:38:27] -rw-------. 1 boinc boinc   1903935 Mar 14 12:38 log.48955010._030809.job.log.1
[2026-03-14 12:38:27] -rw-------. 1 boinc boinc       357 Mar 14 12:38 output.list
[2026-03-14 12:38:27] -rw-r--r--. 1 boinc boinc       620 Mar 14 12:38 runtime_log
[2026-03-14 12:38:27] -rw-------. 1 boinc boinc   2365440 Mar 14 12:38 result.tar.gz
[2026-03-14 12:38:27] -rw-r--r--. 1 boinc boinc      8816 Mar 14 12:38 runtime_log.err
[2026-03-14 12:38:27] -rw-------. 1 boinc boinc       655 Mar 14 12:38 rL7LDmYTHL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmPepLDmSCDM4m.diag
[2026-03-14 12:38:27] -rw-r--r--. 1 boinc boinc     20743 Mar 14 12:38 stderr.txt
[2026-03-14 12:38:27] HITS file was successfully produced:
[2026-03-14 12:38:27] -rw-------. 1 boinc boinc 180536451 Mar 14 12:36 shared/HITS.pool.root.1
[2026-03-14 12:38:27]  *** Contents of shared directory: ***
[2026-03-14 12:38:27] total 609836
[2026-03-14 12:38:27] -rw-r--r--. 2 boinc boinc 440949889 Mar 14 08:45 ATLAS.root_0
[2026-03-14 12:38:27] -rw-r--r--. 2 boinc boinc     15845 Mar 14 08:45 start_atlas.sh
[2026-03-14 12:38:27] -rw-r--r--. 2 boinc boinc    597529 Mar 14 08:45 input.tar.gz
[2026-03-14 12:38:27] -rw-------. 1 boinc boinc 180536451 Mar 14 12:36 HITS.pool.root.1
[2026-03-14 12:38:27] -rw-------. 1 boinc boinc   2365440 Mar 14 12:38 result.tar.gz
12:38:28 (16239): run_atlas exited; CPU time 51354.980871
12:38:28 (16239): called boinc_finish(0)

</stderr_txt>
]]>

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