Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:10:50 (3254530): wrapper (7.7.26015): starting
13:10:50 (3254530): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 13:10:50] Arguments: --nthreads 4
[2026-03-15 13:10:50] Threads: 4
[2026-03-15 13:10:50] Checking for CVMFS
[2026-03-15 13:10:50] No cvmfs_config command found, will try listing directly
[2026-03-15 13:10:50] CVMFS is ok
[2026-03-15 13:10:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 13:10:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 13:10:50] Further information can be found at the LHC@home message board.
[2026-03-15 13:10:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 13:10:50] Checking for apptainer binary...
[2026-03-15 13:10:50] which: no apptainer in ((null))
[2026-03-15 13:10:50] apptainer is not installed, using version from CVMFS
[2026-03-15 13:10:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 13:10:50] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2026-03-15 13:10:50] apptainer works
[2026-03-15 13:10:50] Set ATHENA_PROC_NUMBER=4
[2026-03-15 13:10:50] Set ATHENA_CORE_NUMBER=4
[2026-03-15 13:10:50] Starting ATLAS job with PandaID=7044117511
[2026-03-15 13:10:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 16:04:29]  *** The last 200 lines of the pilot log: ***
[2026-03-15 16:04:29] 2026-03-15 15:03:26,477 | INFO     | extracted standard info from prmon json
[2026-03-15 16:04:29] 2026-03-15 15:03:26,477 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 16:04:29] 2026-03-15 15:03:26,477 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 16:04:29] 2026-03-15 15:03:26,478 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 16:04:29] 2026-03-15 15:03:26,478 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 16:04:29] 2026-03-15 15:03:26,481 | INFO     | fitting pss+swap vs Time
[2026-03-15 16:04:29] 2026-03-15 15:03:26,482 | INFO     | sum of square deviations: 1523386702.5
[2026-03-15 16:04:29] 2026-03-15 15:03:26,483 | INFO     | sum of deviations: 9701711541.499998
[2026-03-15 16:04:29] 2026-03-15 15:03:26,483 | INFO     | mean x: 1773581841.5
[2026-03-15 16:04:29] 2026-03-15 15:03:26,483 | INFO     | mean y: 2298151.1588235293
[2026-03-15 16:04:29] 2026-03-15 15:03:26,483 | INFO     | intersect: -11292784964.137945
[2026-03-15 16:04:29] 2026-03-15 15:03:26,484 | INFO     | chi2: 2.063668623882773
[2026-03-15 16:04:29] 2026-03-15 15:03:26,484 | INFO     | sum of square deviations: 1392881930.0
[2026-03-15 16:04:29] 2026-03-15 15:03:26,486 | INFO     | sum of deviations: 19864753029.000004
[2026-03-15 16:04:29] 2026-03-15 15:03:26,486 | INFO     | mean x: 1773581689.0
[2026-03-15 16:04:29] 2026-03-15 15:03:26,486 | INFO     | mean y: 2309731.484848485
[2026-03-15 16:04:29] 2026-03-15 15:03:26,486 | INFO     | intersect: -25291838659.64382
[2026-03-15 16:04:29] 2026-03-15 15:03:26,487 | INFO     | chi2: 1.2645490172613205
[2026-03-15 16:04:29] 2026-03-15 15:03:26,487 | INFO     | current chi2=1.2645490172613205 (change=38.72325223988318 %)
[2026-03-15 16:04:29] 2026-03-15 15:03:26,487 | INFO     | sum of square deviations: 1270051720.0
[2026-03-15 16:04:29] 2026-03-15 15:03:26,488 | INFO     | sum of deviations: 19226162664.5
[2026-03-15 16:04:29] 2026-03-15 15:03:26,488 | INFO     | mean x: 1773581536.5
[2026-03-15 16:04:29] 2026-03-15 15:03:26,488 | INFO     | mean y: 2308938.44375
[2026-03-15 16:04:29] 2026-03-15 15:03:26,488 | INFO     | intersect: -26846335555.73704
[2026-03-15 16:04:29] 2026-03-15 15:03:26,488 | INFO     | chi2: 1.265451492029394
[2026-03-15 16:04:29] 2026-03-15 15:03:26,489 | INFO     | current chi2=1.265451492029394 (change=-0.07136732192699041 %)
[2026-03-15 16:04:29] 2026-03-15 15:03:26,489 | INFO     | right removable region: 159
[2026-03-15 16:04:29] 2026-03-15 15:03:26,489 | INFO     | sum of square deviations: 1392881930.0
[2026-03-15 16:04:29] 2026-03-15 15:03:26,490 | INFO     | sum of deviations: -10639190255.0
[2026-03-15 16:04:29] 2026-03-15 15:03:26,490 | INFO     | mean x: 1773581994.0
[2026-03-15 16:04:29] 2026-03-15 15:03:26,490 | INFO     | mean y: 2321556.1818181816
[2026-03-15 16:04:29] 2026-03-15 15:03:26,490 | INFO     | intersect: 13549396768.083138
[2026-03-15 16:04:29] 2026-03-15 15:03:26,490 | INFO     | chi2: 0.8225481710373301
[2026-03-15 16:04:29] 2026-03-15 15:03:26,491 | INFO     | current chi2=0.8225481710373301 (change=60.141460624152266 %)
[2026-03-15 16:04:29] 2026-03-15 15:03:26,491 | INFO     | sum of square deviations: 1270051720.0
[2026-03-15 16:04:29] 2026-03-15 15:03:26,492 | INFO     | sum of deviations: -9927047219.0
[2026-03-15 16:04:29] 2026-03-15 15:03:26,492 | INFO     | mean x: 1773582146.5
[2026-03-15 16:04:29] 2026-03-15 15:03:26,492 | INFO     | mean y: 2320678.025
[2026-03-15 16:04:29] 2026-03-15 15:03:26,492 | INFO     | intersect: 13865089758.862806
[2026-03-15 16:04:29] 2026-03-15 15:03:26,492 | INFO     | chi2: 0.8224172677580261
[2026-03-15 16:04:29] 2026-03-15 15:03:26,492 | INFO     | current chi2=0.8224172677580261 (change=0.01591436026645101 %)
[2026-03-15 16:04:29] 2026-03-15 15:03:26,493 | INFO     | left removable region: 20
[2026-03-15 16:04:29] 2026-03-15 15:03:26,493 | INFO     | sum of square deviations: 832722590.0
[2026-03-15 16:04:29] 2026-03-15 15:03:26,494 | INFO     | sum of deviations: 164311308.00000006
[2026-03-15 16:04:29] 2026-03-15 15:03:26,494 | INFO     | mean x: 1773582116.0
[2026-03-15 16:04:29] 2026-03-15 15:03:26,494 | INFO     | mean y: 2333667.2446043165
[2026-03-15 16:04:29] 2026-03-15 15:03:26,494 | INFO     | intersect: -347626332.4299186
[2026-03-15 16:04:29] 2026-03-15 15:03:26,494 | INFO     | chi2: 0.0005553983900803257
[2026-03-15 16:04:29] 2026-03-15 15:03:26,495 | INFO     | current memory leak: 0.20 B/s (using 139 data points, chi2=0.00)
[2026-03-15 16:04:29] 2026-03-15 15:03:26,495 | INFO     | could have reported an average CPU frequency of 2501 MHz (9 samples)
[2026-03-15 16:04:29] 2026-03-15 15:03:26,495 | INFO     | ..............................
[2026-03-15 16:04:29] 2026-03-15 15:03:26,495 | INFO     | . Timing measurements:
[2026-03-15 16:04:29] 2026-03-15 15:03:26,496 | INFO     | . get job = 0 s
[2026-03-15 16:04:29] 2026-03-15 15:03:26,496 | INFO     | . initial setup = 5 s
[2026-03-15 16:04:29] 2026-03-15 15:03:26,496 | INFO     | . payload setup = 5 s
[2026-03-15 16:04:29] 2026-03-15 15:03:26,496 | INFO     | . stage-in = 0 s
[2026-03-15 16:04:29] 2026-03-15 15:03:26,496 | INFO     | . payload execution = 10318 s
[2026-03-15 16:04:29] 2026-03-15 15:03:26,496 | INFO     | . stage-out = 0 s
[2026-03-15 16:04:29] 2026-03-15 15:03:26,496 | INFO     | . log creation = 0 s
[2026-03-15 16:04:29] 2026-03-15 15:03:26,496 | INFO     | ..............................
[2026-03-15 16:04:29] 2026-03-15 15:03:26,585 | INFO     | 
[2026-03-15 16:04:29] 2026-03-15 15:03:26,586 | INFO     | job summary report
[2026-03-15 16:04:29] 2026-03-15 15:03:26,586 | INFO     | --------------------------------------------------
[2026-03-15 16:04:29] 2026-03-15 15:03:26,586 | INFO     | PanDA job id: 7044117511
[2026-03-15 16:04:29] 2026-03-15 15:03:26,586 | INFO     | task id: 48955010
[2026-03-15 16:04:29] 2026-03-15 15:03:26,586 | INFO     | errors: (none)
[2026-03-15 16:04:29] 2026-03-15 15:03:26,586 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 16:04:29] 2026-03-15 15:03:26,586 | INFO     | pilot state: finished 
[2026-03-15 16:04:29] 2026-03-15 15:03:26,586 | INFO     | transexitcode: 0
[2026-03-15 16:04:29] 2026-03-15 15:03:26,586 | INFO     | exeerrorcode: 0
[2026-03-15 16:04:29] 2026-03-15 15:03:26,586 | INFO     | exeerrordiag: 
[2026-03-15 16:04:29] 2026-03-15 15:03:26,586 | INFO     | exitcode: 0
[2026-03-15 16:04:29] 2026-03-15 15:03:26,586 | INFO     | exitmsg: OK
[2026-03-15 16:04:29] 2026-03-15 15:03:26,587 | INFO     | cpuconsumptiontime: 39018 s
[2026-03-15 16:04:29] 2026-03-15 15:03:26,587 | INFO     | nevents: 400
[2026-03-15 16:04:29] 2026-03-15 15:03:26,587 | INFO     | neventsw: 0
[2026-03-15 16:04:29] 2026-03-15 15:03:26,587 | INFO     | pid: 3263150
[2026-03-15 16:04:29] 2026-03-15 15:03:26,587 | INFO     | pgrp: 3263150
[2026-03-15 16:04:29] 2026-03-15 15:03:26,587 | INFO     | corecount: 4
[2026-03-15 16:04:29] 2026-03-15 15:03:26,587 | INFO     | event service: False
[2026-03-15 16:04:29] 2026-03-15 15:03:26,587 | INFO     | sizes: {0: 2279701, 1: 2280218, 12: 2280218, 10327: 2309281, 10328: 2318301, 10329: 2318743}
[2026-03-15 16:04:29] 2026-03-15 15:03:26,587 | INFO     | --------------------------------------------------
[2026-03-15 16:04:29] 2026-03-15 15:03:26,587 | INFO     | 
[2026-03-15 16:04:29] 2026-03-15 15:03:26,587 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot40/slots/0
[2026-03-15 16:04:29] 2026-03-15 15:03:26,626 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 16:04:29] 2026-03-15 15:03:26,626 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 16:04:29] 2026-03-15 15:03:26,627 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 16:04:29] 2026-03-15 15:03:26,627 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 16:04:29] 2026-03-15 15:03:26,627 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 16:04:29] 2026-03-15 15:03:26,627 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 16:04:29] 2026-03-15 15:03:26,627 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 16:04:29] 2026-03-15 15:03:26,627 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 16:04:29] 2026-03-15 15:03:26,627 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 16:04:29] 2026-03-15 15:03:26,627 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 16:04:29] 2026-03-15 15:03:26,627 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 16:04:29] 2026-03-15 15:03:26,627 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 16:04:29] 2026-03-15 15:03:26,627 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 16:04:29] 2026-03-15 15:03:26,628 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 16:04:29] 2026-03-15 15:03:26,628 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 16:04:29] 2026-03-15 15:03:26,628 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 16:04:29] 2026-03-15 15:03:26,628 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 16:04:29] 2026-03-15 15:03:26,628 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 16:04:29] 2026-03-15 15:03:26,628 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 16:04:29] 2026-03-15 15:03:26,628 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 16:04:29] 2026-03-15 15:03:26,628 | INFO     | job 7044117511 has completed (purged errors)
[2026-03-15 16:04:29] 2026-03-15 15:03:26,628 | INFO     | overall cleanup function is called
[2026-03-15 16:04:29] 2026-03-15 15:03:26,674 | WARNING  | process 3263150 can no longer be monitored (due to stat problems) - aborting
[2026-03-15 16:04:29] 2026-03-15 15:03:26,940 | INFO     | using path: /var/lib/boinc/var/slot40/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 16:04:29] 2026-03-15 15:03:27,310 | INFO     | number of running child processes to parent process 3263150: 1
[2026-03-15 16:04:29] 2026-03-15 15:03:27,311 | INFO     | maximum number of monitored processes: 6
[2026-03-15 16:04:29] 2026-03-15 15:03:27,311 | INFO     | aborting job monitoring since job object (job id=7044117511) has expired
[2026-03-15 16:04:29] 2026-03-15 15:03:27,638 | INFO     | --- collectZombieJob: --- 10, [3263150]
[2026-03-15 16:04:29] 2026-03-15 15:03:27,638 | INFO     | zombie collector waiting for pid 3263150
[2026-03-15 16:04:29] 2026-03-15 15:03:27,638 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 16:04:29] 2026-03-15 15:03:27,638 | INFO     | collected zombie processes
[2026-03-15 16:04:29] 2026-03-15 15:03:27,638 | INFO     | will attempt to kill all subprocesses of pid=3263150
[2026-03-15 16:04:29] 2026-03-15 15:03:27,989 | INFO     | process IDs to be killed: [3263150] (in reverse order)
[2026-03-15 16:04:29] 2026-03-15 15:03:28,120 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 16:04:29] 2026-03-15 15:03:28,120 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 16:04:29] 2026-03-15 15:03:28,132 | INFO     | did not find any defunct processes belonging to 3263150
[2026-03-15 16:04:29] 2026-03-15 15:03:28,143 | INFO     | did not find any defunct processes belonging to 3263150
[2026-03-15 16:04:29] 2026-03-15 15:03:28,143 | INFO     | ready for new job
[2026-03-15 16:04:29] 2026-03-15 15:03:28,143 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 16:04:29] 2026-03-15 15:03:28,145 | INFO     | **************************************
[2026-03-15 16:04:29] 2026-03-15 15:03:28,146 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 16:04:29] 2026-03-15 15:03:28,146 | INFO     | **************************************
[2026-03-15 16:04:29] 2026-03-15 15:03:28,146 | INFO     | 
[2026-03-15 16:04:29] 2026-03-15 15:03:28,149 | INFO     | architecture information:
[2026-03-15 16:04:29] 2026-03-15 15:03:28,150 | INFO     | executing command: cat /etc/os-release
[2026-03-15 16:04:29] 2026-03-15 15:03:28,165 | INFO     | cat /etc/os-release:
[2026-03-15 16:04:29] NAME="CentOS Linux"
[2026-03-15 16:04:29] VERSION="7 (Core)"
[2026-03-15 16:04:29] ID="centos"
[2026-03-15 16:04:29] ID_LIKE="rhel fedora"
[2026-03-15 16:04:29] VERSION_ID="7"
[2026-03-15 16:04:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 16:04:29] ANSI_COLOR="0;31"
[2026-03-15 16:04:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 16:04:29] HOME_URL="https://www.centos.org/"
[2026-03-15 16:04:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 16:04:29] 
[2026-03-15 16:04:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 16:04:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 16:04:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 16:04:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 16:04:29] 
[2026-03-15 16:04:29] 2026-03-15 15:03:28,166 | INFO     | **************************************
[2026-03-15 16:04:29] 2026-03-15 15:03:28,669 | INFO     | executing command: df -mP /var/lib/boinc/var/slot40/slots/0
[2026-03-15 16:04:29] 2026-03-15 15:03:28,686 | INFO     | sufficient remaining disk space (36453744640 B)
[2026-03-15 16:04:29] 2026-03-15 15:03:28,687 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 16:04:29] 2026-03-15 15:03:28,687 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 16:04:29] 2026-03-15 15:03:28,687 | INFO     | update_server=False
[2026-03-15 16:04:29] 2026-03-15 15:03:28,687 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 16:04:29] 2026-03-15 15:03:28,687 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 16:04:29] 2026-03-15 15:03:28,687 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 16:04:29] 2026-03-15 15:03:28,688 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 16:04:29] 2026-03-15 15:03:28,688 | INFO     | aborting loop
[2026-03-15 16:04:29] 2026-03-15 15:03:29,276 | INFO     | all data control threads have been joined
[2026-03-15 16:04:29] 2026-03-15 15:03:29,376 | INFO     | all payload control threads have been joined
[2026-03-15 16:04:29] 2026-03-15 15:03:29,382 | INFO     | all job control threads have been joined
[2026-03-15 16:04:29] 2026-03-15 15:03:29,692 | INFO     | [job] retrieve thread has finished
[2026-03-15 16:04:29] 2026-03-15 15:03:29,693 | INFO     | [job] job monitor thread has finished
[2026-03-15 16:04:29] 2026-03-15 15:03:29,732 | INFO     | [job] validate thread has finished
[2026-03-15 16:04:29] 2026-03-15 15:03:29,841 | INFO     | [payload] validate_post thread has finished
[2026-03-15 16:04:29] 2026-03-15 15:03:30,193 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 16:04:29] 2026-03-15 15:03:30,282 | INFO     | [data] control thread has finished
[2026-03-15 16:04:29] 2026-03-15 15:03:30,381 | INFO     | [payload] control thread has finished
[2026-03-15 16:04:29] 2026-03-15 15:03:30,388 | INFO     | [job] control thread has finished
[2026-03-15 16:04:29] 2026-03-15 15:03:30,571 | INFO     | [payload] failed_post thread has finished
[2026-03-15 16:04:29] 2026-03-15 15:03:30,656 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 16:04:29] 2026-03-15 15:03:30,692 | INFO     | [data] copytool_out thread has finished
[2026-03-15 16:04:29] 2026-03-15 15:03:30,756 | INFO     | [data] copytool_in thread has finished
[2026-03-15 16:04:29] 2026-03-15 15:03:30,929 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 16:04:29] 2026-03-15 15:03:31,054 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 16:04:29] 2026-03-15 15:03:31,595 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 16:04:29] 2026-03-15 15:03:32,600 | INFO     | [job] queue monitor thread has finished
[2026-03-15 16:04:29] 2026-03-15 15:03:32,695 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 16:04:29] 2026-03-15 15:03:58,787 | INFO     | PID=3258304 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 16:04:29] 2026-03-15 15:03:58,788 | INFO     | .. there are 13 such processes running
[2026-03-15 16:04:29] 2026-03-15 15:03:58,788 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 16:04:29] 2026-03-15 15:03:58,788 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 16:04:29] 2026-03-15 15:03:58,788 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 16:04:29] 2026-03-15 15:04:22,124 | INFO     | [monitor] cgroup control has ended
[2026-03-15 16:04:29] 2026-03-15 15:04:23,716 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23282525288256)>', '<ExcThread(monitor, started 23282287130368)>']
[2026-03-15 16:04:29] 2026-03-15 15:04:23,915 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 16:04:29] 2026-03-15 15:04:23,916 | INFO     | [monitor] control thread has ended
[2026-03-15 16:04:29] 2026-03-15 15:04:28,741 | INFO     | all workflow threads have been joined
[2026-03-15 16:04:29] 2026-03-15 15:04:28,741 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 16:04:29] 2026-03-15 15:04:28,741 | INFO     | traces error code: 0
[2026-03-15 16:04:29] 2026-03-15 15:04:28,741 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 16:04:29] 2026-03-15 15:04:28,874 [wrapper] ==== pilot stdout END ====
[2026-03-15 16:04:29] 2026-03-15 15:04:28,877 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 16:04:29] 2026-03-15 15:04:28,879 [wrapper] pilotpid: 3258304
[2026-03-15 16:04:29] 2026-03-15 15:04:28,882 [wrapper] Pilot exit status: 0
[2026-03-15 16:04:29] 2026-03-15 15:04:28,893 [wrapper] pandaids: 7044117511
[2026-03-15 16:04:29] 2026-03-15 15:04:28,969 [wrapper] cleanup supervisor_pilot 3481315 3258305
[2026-03-15 16:04:29] 2026-03-15 15:04:28,972 [wrapper] Test setup, not cleaning
[2026-03-15 16:04:29] 2026-03-15 15:04:28,975 [wrapper] apfmon messages muted
[2026-03-15 16:04:29] 2026-03-15 15:04:28,978 [wrapper] ==== wrapper stdout END ====
[2026-03-15 16:04:29] 2026-03-15 15:04:28,981 [wrapper] ==== wrapper stderr END ====
[2026-03-15 16:04:29]  *** Error codes and diagnostics ***
[2026-03-15 16:04:29]     "exeErrorCode": 0,
[2026-03-15 16:04:29]     "exeErrorDiag": "",
[2026-03-15 16:04:29]     "pilotErrorCode": 0,
[2026-03-15 16:04:29]     "pilotErrorDiag": "",
[2026-03-15 16:04:29]  *** Listing of results directory ***
[2026-03-15 16:04:29] total 610316
[2026-03-15 16:04:29] -rw-r--r--. 1 boinc boinc    585013 Mar 13 13:53 pilot3.tar.gz
[2026-03-15 16:04:29] -rwx------. 1 boinc boinc     36322 Mar 13 14:08 runpilot2-wrapper.sh
[2026-03-15 16:04:29] -rw-r--r--. 1 boinc boinc      5111 Mar 13 14:08 queuedata.json
[2026-03-15 16:04:29] -rw-r--r--. 1 boinc boinc       100 Mar 15 13:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 16:04:29] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 13:10 run_atlas
[2026-03-15 16:04:29] -rw-r--r--. 1 boinc boinc       105 Mar 15 13:10 job.xml
[2026-03-15 16:04:29] -rw-r--r--. 1 boinc boinc      6563 Mar 15 13:10 init_data.xml
[2026-03-15 16:04:29] -rw-r--r--. 2 boinc boinc 437363224 Mar 15 13:10 EVNT.46701403._001602.pool.root.1
[2026-03-15 16:04:29] -rw-r--r--. 2 boinc boinc     15845 Mar 15 13:10 start_atlas.sh
[2026-03-15 16:04:29] drwxrwx--x. 2 boinc boinc      4096 Mar 15 13:10 shared
[2026-03-15 16:04:29] -rw-r--r--. 2 boinc boinc    597532 Mar 15 13:10 input.tar.gz
[2026-03-15 16:04:29] -rw-r--r--. 1 boinc boinc         0 Mar 15 13:10 boinc_lockfile
[2026-03-15 16:04:29] -rw-r--r--. 1 boinc boinc      2563 Mar 15 13:10 pandaJob.out
[2026-03-15 16:04:29] -rw-------. 1 boinc boinc   1006481 Mar 15 13:10 agis_schedconf.cvmfs.json
[2026-03-15 16:04:29] -rw-------. 1 boinc boinc   1511579 Mar 15 13:10 agis_ddmendpoints.agis.ALL.json
[2026-03-15 16:04:29] -rw-------. 1 boinc boinc       452 Mar 15 13:11 workernode_map.json
[2026-03-15 16:04:29] drwx------. 5 boinc boinc      4096 Mar 15 13:11 pilot3
[2026-03-15 16:04:29] -rw-------. 1 boinc boinc 180048840 Mar 15 16:02 HITS.48955010._030412.pool.root.1
[2026-03-15 16:04:29] -rw-r--r--. 1 boinc boinc       531 Mar 15 16:02 boinc_task_state.xml
[2026-03-15 16:04:29] -rw-------. 1 boinc boinc        95 Mar 15 16:03 pilot_heartbeat.json
[2026-03-15 16:04:29] -rw-------. 1 boinc boinc      1031 Mar 15 16:03 memory_monitor_summary.json
[2026-03-15 16:04:29] -rw-------. 1 boinc boinc    340641 Mar 15 16:03 log.48955010._030412.job.log.tgz.1
[2026-03-15 16:04:29] -rw-------. 1 boinc boinc      6407 Mar 15 16:03 heartbeat.json
[2026-03-15 16:04:29] -rw-r--r--. 1 boinc boinc        28 Mar 15 16:04 wrapper_checkpoint.txt
[2026-03-15 16:04:29] -rw-r--r--. 1 boinc boinc      8192 Mar 15 16:04 boinc_mmap_file
[2026-03-15 16:04:29] -rw-------. 1 boinc boinc      4829 Mar 15 16:04 pilotlog.txt
[2026-03-15 16:04:29] -rw-------. 1 boinc boinc   1464631 Mar 15 16:04 log.48955010._030412.job.log.1
[2026-03-15 16:04:29] -rw-------. 1 boinc boinc       357 Mar 15 16:04 output.list
[2026-03-15 16:04:29] -rw-r--r--. 1 boinc boinc       620 Mar 15 16:04 runtime_log
[2026-03-15 16:04:29] -rw-------. 1 boinc boinc   1822720 Mar 15 16:04 result.tar.gz
[2026-03-15 16:04:29] -rw-r--r--. 1 boinc boinc      9205 Mar 15 16:04 runtime_log.err
[2026-03-15 16:04:29] -rw-------. 1 boinc boinc       664 Mar 15 16:04 S0KNDmoQHL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmKzmLDmgSr1Ln.diag
[2026-03-15 16:04:29] -rw-r--r--. 1 boinc boinc     20839 Mar 15 16:04 stderr.txt
[2026-03-15 16:04:29] HITS file was successfully produced:
[2026-03-15 16:04:29] -rw-------. 1 boinc boinc 180048840 Mar 15 16:02 shared/HITS.pool.root.1
[2026-03-15 16:04:29]  *** Contents of shared directory: ***
[2026-03-15 16:04:29] total 605336
[2026-03-15 16:04:29] -rw-r--r--. 2 boinc boinc 437363224 Mar 15 13:10 ATLAS.root_0
[2026-03-15 16:04:29] -rw-r--r--. 2 boinc boinc     15845 Mar 15 13:10 start_atlas.sh
[2026-03-15 16:04:29] -rw-r--r--. 2 boinc boinc    597532 Mar 15 13:10 input.tar.gz
[2026-03-15 16:04:29] -rw-------. 1 boinc boinc 180048840 Mar 15 16:02 HITS.pool.root.1
[2026-03-15 16:04:29] -rw-------. 1 boinc boinc   1822720 Mar 15 16:04 result.tar.gz
16:04:30 (3254530): run_atlas exited; CPU time 39426.856845
16:04:30 (3254530): called boinc_finish(0)

</stderr_txt>
]]>

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