Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:13:02 (1392333): wrapper (7.7.26015): starting
13:13:02 (1392333): wrapper: running run_atlas (--nthreads 12)
[2026-03-14 13:13:02] Arguments: --nthreads 12
[2026-03-14 13:13:02] Threads: 12
[2026-03-14 13:13:02] Checking for CVMFS
[2026-03-14 13:13:02] No cvmfs_config command found, will try listing directly
[2026-03-14 13:13:02] CVMFS is ok
[2026-03-14 13:13:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 13:13:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 13:13:02] Further information can be found at the LHC@home message board.
[2026-03-14 13:13:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 13:13:02] Checking for apptainer binary...
[2026-03-14 13:13:02] which: no apptainer in ((null))
[2026-03-14 13:13:02] apptainer is not installed, using version from CVMFS
[2026-03-14 13:13:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 13:13:03] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut18.grid.cesnet.cz
[2026-03-14 13:13:03] apptainer works
[2026-03-14 13:13:03] Set ATHENA_PROC_NUMBER=12
[2026-03-14 13:13:03] Set ATHENA_CORE_NUMBER=12
[2026-03-14 13:13:03] Starting ATLAS job with PandaID=7043761993
[2026-03-14 13:13:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 13:39:21]  *** The last 200 lines of the pilot log: ***
[2026-03-14 13:39:21]  filesize=344878
[2026-03-14 13:39:21]  filetype=log
[2026-03-14 13:39:21]  guid=ef86bbe0-e5b7-42bd-a06e-c728ec0040bb
[2026-03-14 13:39:21]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-14 13:39:21]  is_altstaged=None
[2026-03-14 13:39:21]  is_tar=False
[2026-03-14 13:39:21]  lfn=log.48955010._027901.job.log.tgz.1
[2026-03-14 13:39:21]  mtime=0
[2026-03-14 13:39:21]  protocol_id=None
[2026-03-14 13:39:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-14 13:39:21]  replicas=None
[2026-03-14 13:39:21]  scope=mc23_13p6TeV
[2026-03-14 13:39:21]  status=None
[2026-03-14 13:39:21]  status_code=0
[2026-03-14 13:39:21]  storage_token=
[2026-03-14 13:39:21]  surl=/var/lib/boinc/var/slot128/slots/0/PanDA_Pilot-7043761993/log.48955010._027901.job.log.tgz.1
[2026-03-14 13:39:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/45/cf/log.48955010._027901.job.log.tgz.1
[2026-03-14 13:39:21]  workdir=None
[2026-03-14 13:39:21] ]
[2026-03-14 13:39:21] 2026-03-14 12:38:39,058 | INFO     | transferring file log.48955010._027901.job.log.tgz.1 from /var/lib/boinc/var/slot128/slots/0/PanDA_Pilot-7043761993/log.48955010._027901.job.log.tgz.1 to /var/lib/
[2026-03-14 13:39:21] 2026-03-14 12:38:39,058 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot128/slots/0/PanDA_Pilot-7043761993/log.48955010._027901.job.log.tgz.1 /var/lib/boinc/var/slot128/slots/0/
[2026-03-14 13:39:21] 2026-03-14 12:38:39,070 | INFO     | adding to output.list: log.48955010._027901.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/45/cf/log.48955010._027901.job.log.tg
[2026-03-14 13:39:21] 2026-03-14 12:38:39,071 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-14 13:39:21] 2026-03-14 12:38:39,071 | INFO     | summary of transferred files:
[2026-03-14 13:39:21] 2026-03-14 12:38:39,071 | INFO     |  -- lfn=log.48955010._027901.job.log.tgz.1, status_code=0, status=transferred
[2026-03-14 13:39:21] 2026-03-14 12:38:39,071 | INFO     | stage-out finished correctly
[2026-03-14 13:39:21] 2026-03-14 12:38:39,777 | INFO     | monitor loop #117: job 0:7043761993 is in state 'finished'
[2026-03-14 13:39:21] 2026-03-14 12:38:39,777 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-14 13:39:21] 2026-03-14 12:38:40,225 | INFO     | time since job start (1527s) is within the limit (345600.0s)
[2026-03-14 13:39:21] 2026-03-14 12:38:42,016 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 13:39:21] 2026-03-14 12:38:42,063 | INFO     | job 7043761993 has state=finished
[2026-03-14 13:39:21] 2026-03-14 12:38:42,063 | INFO     | preparing for final server update for job 7043761993 in state='finished'
[2026-03-14 13:39:21] 2026-03-14 12:38:42,063 | INFO     | reading metadata from: /var/lib/boinc/var/slot128/slots/0/PanDA_Pilot-7043761993/jobReport.json
[2026-03-14 13:39:21] 2026-03-14 12:38:42,067 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot128/slots/0/workernode_map.json
[2026-03-14 13:39:21] 2026-03-14 12:38:42,067 | INFO     | this job has now completed (state=finished)
[2026-03-14 13:39:21] 2026-03-14 12:38:42,067 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 13:39:21] 2026-03-14 12:38:42,067 | INFO     | log transfer has been attempted: DONE
[2026-03-14 13:39:21] 2026-03-14 12:38:42,067 | INFO     | job 7043761993 has finished - writing final server update
[2026-03-14 13:39:21] 2026-03-14 12:38:42,067 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_17529/.job.ad'
[2026-03-14 13:39:21] 2026-03-14 12:38:42,067 | INFO     | total number of processed events: 400 (read)
[2026-03-14 13:39:21] 2026-03-14 12:38:42,085 | INFO     | using path: /var/lib/boinc/var/slot128/slots/0/PanDA_Pilot-7043761993/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 13:39:21] 2026-03-14 12:38:42,085 | INFO     | extracted standard info from prmon json
[2026-03-14 13:39:21] 2026-03-14 12:38:42,085 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 13:39:21] 2026-03-14 12:38:42,086 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 13:39:21] 2026-03-14 12:38:42,086 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 13:39:21] 2026-03-14 12:38:42,086 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 13:39:21] 2026-03-14 12:38:42,086 | INFO     | fitting pss+swap vs Time
[2026-03-14 13:39:21] 2026-03-14 12:38:42,086 | INFO     | sum of square deviations: 1802824.5
[2026-03-14 13:39:21] 2026-03-14 12:38:42,087 | INFO     | sum of deviations: 19827257.0
[2026-03-14 13:39:21] 2026-03-14 12:38:42,087 | INFO     | mean x: 1773491235.5
[2026-03-14 13:39:21] 2026-03-14 12:38:42,087 | INFO     | mean y: 2750940.0
[2026-03-14 13:39:21] 2026-03-14 12:38:42,087 | INFO     | intersect: -19501902182.64506
[2026-03-14 13:39:21] 2026-03-14 12:38:42,087 | INFO     | chi2: 0.00015309884395443653
[2026-03-14 13:39:21] 2026-03-14 12:38:42,087 | INFO     | current memory leak: 11.00 B/s (using 18 data points, chi2=0.00)
[2026-03-14 13:39:21] 2026-03-14 12:38:42,087 | INFO     | could have reported an average CPU frequency of 3625 MHz (4 samples)
[2026-03-14 13:39:21] 2026-03-14 12:38:42,087 | INFO     | ..............................
[2026-03-14 13:39:21] 2026-03-14 12:38:42,087 | INFO     | . Timing measurements:
[2026-03-14 13:39:21] 2026-03-14 12:38:42,087 | INFO     | . get job = 0 s
[2026-03-14 13:39:21] 2026-03-14 12:38:42,087 | INFO     | . initial setup = 4 s
[2026-03-14 13:39:21] 2026-03-14 12:38:42,087 | INFO     | . payload setup = 4 s
[2026-03-14 13:39:21] 2026-03-14 12:38:42,087 | INFO     | . stage-in = 0 s
[2026-03-14 13:39:21] 2026-03-14 12:38:42,087 | INFO     | . payload execution = 1506 s
[2026-03-14 13:39:21] 2026-03-14 12:38:42,087 | INFO     | . stage-out = 0 s
[2026-03-14 13:39:21] 2026-03-14 12:38:42,088 | INFO     | . log creation = 0 s
[2026-03-14 13:39:21] 2026-03-14 12:38:42,088 | INFO     | ..............................
[2026-03-14 13:39:21] 2026-03-14 12:38:42,135 | INFO     | 
[2026-03-14 13:39:21] 2026-03-14 12:38:42,135 | INFO     | job summary report
[2026-03-14 13:39:21] 2026-03-14 12:38:42,135 | INFO     | --------------------------------------------------
[2026-03-14 13:39:21] 2026-03-14 12:38:42,135 | INFO     | PanDA job id: 7043761993
[2026-03-14 13:39:21] 2026-03-14 12:38:42,135 | INFO     | task id: 48955010
[2026-03-14 13:39:21] 2026-03-14 12:38:42,135 | INFO     | errors: (none)
[2026-03-14 13:39:21] 2026-03-14 12:38:42,135 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 13:39:21] 2026-03-14 12:38:42,135 | INFO     | pilot state: finished 
[2026-03-14 13:39:21] 2026-03-14 12:38:42,135 | INFO     | transexitcode: 0
[2026-03-14 13:39:21] 2026-03-14 12:38:42,135 | INFO     | exeerrorcode: 0
[2026-03-14 13:39:21] 2026-03-14 12:38:42,135 | INFO     | exeerrordiag: 
[2026-03-14 13:39:21] 2026-03-14 12:38:42,135 | INFO     | exitcode: 0
[2026-03-14 13:39:21] 2026-03-14 12:38:42,136 | INFO     | exitmsg: OK
[2026-03-14 13:39:21] 2026-03-14 12:38:42,136 | INFO     | cpuconsumptiontime: 15866 s
[2026-03-14 13:39:21] 2026-03-14 12:38:42,136 | INFO     | nevents: 400
[2026-03-14 13:39:21] 2026-03-14 12:38:42,136 | INFO     | neventsw: 0
[2026-03-14 13:39:21] 2026-03-14 12:38:42,136 | INFO     | pid: 1404024
[2026-03-14 13:39:21] 2026-03-14 12:38:42,136 | INFO     | pgrp: 1404024
[2026-03-14 13:39:21] 2026-03-14 12:38:42,136 | INFO     | corecount: 12
[2026-03-14 13:39:21] 2026-03-14 12:38:42,136 | INFO     | event service: False
[2026-03-14 13:39:21] 2026-03-14 12:38:42,136 | INFO     | sizes: {0: 2279815, 1: 2280219, 11: 2280219, 1514: 2305016, 1515: 2314038, 1518: 2314416}
[2026-03-14 13:39:21] 2026-03-14 12:38:42,136 | INFO     | --------------------------------------------------
[2026-03-14 13:39:21] 2026-03-14 12:38:42,136 | INFO     | 
[2026-03-14 13:39:21] 2026-03-14 12:38:42,136 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot128/slots/0
[2026-03-14 13:39:21] 2026-03-14 12:38:42,152 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 13:39:21] 2026-03-14 12:38:42,152 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 13:39:21] 2026-03-14 12:38:42,152 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 13:39:21] 2026-03-14 12:38:42,152 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 13:39:21] 2026-03-14 12:38:42,152 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 13:39:21] 2026-03-14 12:38:42,152 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 13:39:21] 2026-03-14 12:38:42,152 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 13:39:21] 2026-03-14 12:38:42,152 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 13:39:21] 2026-03-14 12:38:42,152 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 13:39:21] 2026-03-14 12:38:42,152 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 13:39:21] 2026-03-14 12:38:42,152 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 13:39:21] 2026-03-14 12:38:42,152 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 13:39:21] 2026-03-14 12:38:42,152 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 13:39:21] 2026-03-14 12:38:42,152 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 13:39:21] 2026-03-14 12:38:42,152 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 13:39:21] 2026-03-14 12:38:42,153 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 13:39:21] 2026-03-14 12:38:42,153 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 13:39:21] 2026-03-14 12:38:42,153 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 13:39:21] 2026-03-14 12:38:42,153 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 13:39:21] 2026-03-14 12:38:42,153 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 13:39:21] 2026-03-14 12:38:42,153 | INFO     | job 7043761993 has completed (purged errors)
[2026-03-14 13:39:21] 2026-03-14 12:38:42,153 | INFO     | overall cleanup function is called
[2026-03-14 13:39:21] 2026-03-14 12:38:43,159 | INFO     | --- collectZombieJob: --- 10, [1404024]
[2026-03-14 13:39:21] 2026-03-14 12:38:43,160 | INFO     | zombie collector waiting for pid 1404024
[2026-03-14 13:39:21] 2026-03-14 12:38:43,160 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 13:39:21] 2026-03-14 12:38:43,160 | INFO     | collected zombie processes
[2026-03-14 13:39:21] 2026-03-14 12:38:43,160 | INFO     | will attempt to kill all subprocesses of pid=1404024
[2026-03-14 13:39:21] 2026-03-14 12:38:43,512 | INFO     | process IDs to be killed: [1404024] (in reverse order)
[2026-03-14 13:39:21] 2026-03-14 12:38:43,657 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 13:39:21] 2026-03-14 12:38:43,657 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 13:39:21] 2026-03-14 12:38:43,681 | INFO     | did not find any defunct processes belonging to 1404024
[2026-03-14 13:39:21] 2026-03-14 12:38:43,702 | INFO     | did not find any defunct processes belonging to 1404024
[2026-03-14 13:39:21] 2026-03-14 12:38:43,702 | INFO     | ready for new job
[2026-03-14 13:39:21] 2026-03-14 12:38:43,702 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 13:39:21] 2026-03-14 12:38:43,703 | INFO     | **************************************
[2026-03-14 13:39:21] 2026-03-14 12:38:43,703 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 13:39:21] 2026-03-14 12:38:43,703 | INFO     | **************************************
[2026-03-14 13:39:21] 2026-03-14 12:38:43,703 | INFO     | 
[2026-03-14 13:39:21] 2026-03-14 12:38:43,709 | INFO     | architecture information:
[2026-03-14 13:39:21] 2026-03-14 12:38:43,709 | INFO     | executing command: cat /etc/os-release
[2026-03-14 13:39:21] 2026-03-14 12:38:43,722 | INFO     | cat /etc/os-release:
[2026-03-14 13:39:21] NAME="CentOS Linux"
[2026-03-14 13:39:21] VERSION="7 (Core)"
[2026-03-14 13:39:21] ID="centos"
[2026-03-14 13:39:21] ID_LIKE="rhel fedora"
[2026-03-14 13:39:21] VERSION_ID="7"
[2026-03-14 13:39:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 13:39:21] ANSI_COLOR="0;31"
[2026-03-14 13:39:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 13:39:21] HOME_URL="https://www.centos.org/"
[2026-03-14 13:39:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 13:39:21] 
[2026-03-14 13:39:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 13:39:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 13:39:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 13:39:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 13:39:21] 
[2026-03-14 13:39:21] 2026-03-14 12:38:43,722 | INFO     | **************************************
[2026-03-14 13:39:21] 2026-03-14 12:38:44,225 | INFO     | executing command: df -mP /var/lib/boinc/var/slot128/slots/0
[2026-03-14 13:39:21] 2026-03-14 12:38:44,239 | INFO     | sufficient remaining disk space (110116208640 B)
[2026-03-14 13:39:21] 2026-03-14 12:38:44,239 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 13:39:21] 2026-03-14 12:38:44,239 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 13:39:21] 2026-03-14 12:38:44,239 | INFO     | update_server=False
[2026-03-14 13:39:21] 2026-03-14 12:38:44,239 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 13:39:21] 2026-03-14 12:38:44,239 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 13:39:21] 2026-03-14 12:38:44,240 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 13:39:21] 2026-03-14 12:38:44,240 | INFO     | aborting loop
[2026-03-14 13:39:21] 2026-03-14 12:38:44,482 | INFO     | all job control threads have been joined
[2026-03-14 13:39:21] 2026-03-14 12:38:44,629 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 13:39:21] 2026-03-14 12:38:44,680 | INFO     | all payload control threads have been joined
[2026-03-14 13:39:21] 2026-03-14 12:38:44,981 | INFO     | all data control threads have been joined
[2026-03-14 13:39:21] 2026-03-14 12:38:45,243 | INFO     | [job] job monitor thread has finished
[2026-03-14 13:39:21] 2026-03-14 12:38:45,244 | INFO     | [job] retrieve thread has finished
[2026-03-14 13:39:21] 2026-03-14 12:38:45,370 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 13:39:21] 2026-03-14 12:38:45,488 | INFO     | [job] control thread has finished
[2026-03-14 13:39:21] 2026-03-14 12:38:45,533 | INFO     | [payload] validate_post thread has finished
[2026-03-14 13:39:21] 2026-03-14 12:38:45,686 | INFO     | [payload] control thread has finished
[2026-03-14 13:39:21] 2026-03-14 12:38:45,728 | INFO     | [job] validate thread has finished
[2026-03-14 13:39:21] 2026-03-14 12:38:45,872 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 13:39:21] 2026-03-14 12:38:45,905 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 13:39:21] 2026-03-14 12:38:45,987 | INFO     | [data] control thread has finished
[2026-03-14 13:39:21] 2026-03-14 12:38:46,108 | INFO     | [data] copytool_in thread has finished
[2026-03-14 13:39:21] 2026-03-14 12:38:46,529 | INFO     | [payload] failed_post thread has finished
[2026-03-14 13:39:21] 2026-03-14 12:38:46,588 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 13:39:21] 2026-03-14 12:38:46,635 | INFO     | [data] copytool_out thread has finished
[2026-03-14 13:39:21] 2026-03-14 12:38:47,146 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 13:39:21] 2026-03-14 12:38:48,148 | INFO     | [job] queue monitor thread has finished
[2026-03-14 13:39:21] 2026-03-14 12:38:48,246 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 13:39:21] 2026-03-14 12:39:13,768 | INFO     | PID=1396900 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 13:39:21] 2026-03-14 12:39:13,768 | INFO     | .. there are 12 such processes running
[2026-03-14 13:39:21] 2026-03-14 12:39:13,769 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 13:39:21] 2026-03-14 12:39:13,769 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 13:39:21] 2026-03-14 12:39:13,769 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 13:39:21] 2026-03-14 12:39:15,465 | INFO     | [monitor] cgroup control has ended
[2026-03-14 13:39:21] 2026-03-14 12:39:16,633 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23022149601088)>', '<ExcThread(monitor, started 23021902624512)>']
[2026-03-14 13:39:21] 2026-03-14 12:39:16,784 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 13:39:21] 2026-03-14 12:39:16,785 | INFO     | [monitor] control thread has ended
[2026-03-14 13:39:21] 2026-03-14 12:39:21,652 | INFO     | all workflow threads have been joined
[2026-03-14 13:39:21] 2026-03-14 12:39:21,652 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 13:39:21] 2026-03-14 12:39:21,652 | INFO     | traces error code: 0
[2026-03-14 13:39:21] 2026-03-14 12:39:21,652 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 13:39:21] 2026-03-14 12:39:21,812 [wrapper] ==== pilot stdout END ====
[2026-03-14 13:39:21] 2026-03-14 12:39:21,814 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 13:39:21] 2026-03-14 12:39:21,817 [wrapper] pilotpid: 1396900
[2026-03-14 13:39:21] 2026-03-14 12:39:21,819 [wrapper] Pilot exit status: 0
[2026-03-14 13:39:21] 2026-03-14 12:39:21,827 [wrapper] pandaids: 7043761993
[2026-03-14 13:39:21] 2026-03-14 12:39:21,931 [wrapper] cleanup supervisor_pilot 1482993 1396901
[2026-03-14 13:39:21] 2026-03-14 12:39:21,933 [wrapper] Test setup, not cleaning
[2026-03-14 13:39:21] 2026-03-14 12:39:21,935 [wrapper] apfmon messages muted
[2026-03-14 13:39:21] 2026-03-14 12:39:21,938 [wrapper] ==== wrapper stdout END ====
[2026-03-14 13:39:21] 2026-03-14 12:39:21,940 [wrapper] ==== wrapper stderr END ====
[2026-03-14 13:39:21]  *** Error codes and diagnostics ***
[2026-03-14 13:39:21]     "exeErrorCode": 0,
[2026-03-14 13:39:21]     "exeErrorDiag": "",
[2026-03-14 13:39:21]     "pilotErrorCode": 0,
[2026-03-14 13:39:21]     "pilotErrorDiag": "",
[2026-03-14 13:39:21]  *** Listing of results directory ***
[2026-03-14 13:39:21] total 617916
[2026-03-14 13:39:21] -rw-r--r--. 1 boinc boinc    585013 Mar 13 05:05 pilot3.tar.gz
[2026-03-14 13:39:21] -rwx------. 1 boinc boinc     36322 Mar 13 05:38 runpilot2-wrapper.sh
[2026-03-14 13:39:21] -rw-r--r--. 1 boinc boinc      5111 Mar 13 05:38 queuedata.json
[2026-03-14 13:39:21] -rw-r--r--. 1 boinc boinc       100 Mar 14 13:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 13:39:21] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 13:12 run_atlas
[2026-03-14 13:39:21] -rw-r--r--. 1 boinc boinc       105 Mar 14 13:12 job.xml
[2026-03-14 13:39:21] -rw-r--r--. 1 boinc boinc      6709 Mar 14 13:13 init_data.xml
[2026-03-14 13:39:21] -rw-r--r--. 2 boinc boinc 440224061 Mar 14 13:13 EVNT.46701403._001552.pool.root.1
[2026-03-14 13:39:21] -rw-r--r--. 2 boinc boinc     15845 Mar 14 13:13 start_atlas.sh
[2026-03-14 13:39:21] drwxrwx--x. 2 boinc boinc      4096 Mar 14 13:13 shared
[2026-03-14 13:39:21] -rw-r--r--. 2 boinc boinc    597537 Mar 14 13:13 input.tar.gz
[2026-03-14 13:39:21] -rw-r--r--. 1 boinc boinc         0 Mar 14 13:13 boinc_lockfile
[2026-03-14 13:39:21] -rw-r--r--. 1 boinc boinc      2563 Mar 14 13:13 pandaJob.out
[2026-03-14 13:39:21] -rw-------. 1 boinc boinc   1004579 Mar 14 13:13 agis_schedconf.cvmfs.json
[2026-03-14 13:39:21] -rw-------. 1 boinc boinc   1511579 Mar 14 13:13 agis_ddmendpoints.agis.ALL.json
[2026-03-14 13:39:21] -rw-------. 1 boinc boinc       445 Mar 14 13:13 workernode_map.json
[2026-03-14 13:39:21] drwx------. 5 boinc boinc      4096 Mar 14 13:13 pilot3
[2026-03-14 13:39:21] -rw-r--r--. 1 boinc boinc       529 Mar 14 13:38 boinc_task_state.xml
[2026-03-14 13:39:21] -rw-------. 1 boinc boinc 187364096 Mar 14 13:38 HITS.48955010._027901.pool.root.1
[2026-03-14 13:39:21] -rw-------. 1 boinc boinc      1028 Mar 14 13:38 memory_monitor_summary.json
[2026-03-14 13:39:21] -rw-------. 1 boinc boinc    344878 Mar 14 13:38 log.48955010._027901.job.log.tgz.1
[2026-03-14 13:39:21] -rw-------. 1 boinc boinc      6367 Mar 14 13:38 heartbeat.json
[2026-03-14 13:39:21] -rw-------. 1 boinc boinc        95 Mar 14 13:39 pilot_heartbeat.json
[2026-03-14 13:39:21] -rw-r--r--. 1 boinc boinc        26 Mar 14 13:39 wrapper_checkpoint.txt
[2026-03-14 13:39:21] -rw-r--r--. 1 boinc boinc      8192 Mar 14 13:39 boinc_mmap_file
[2026-03-14 13:39:21] -rw-------. 1 boinc boinc      4831 Mar 14 13:39 pilotlog.txt
[2026-03-14 13:39:21] -rw-------. 1 boinc boinc    262758 Mar 14 13:39 log.48955010._027901.job.log.1
[2026-03-14 13:39:21] -rw-------. 1 boinc boinc       357 Mar 14 13:39 output.list
[2026-03-14 13:39:21] -rw-r--r--. 1 boinc boinc       620 Mar 14 13:39 runtime_log
[2026-03-14 13:39:21] -rw-------. 1 boinc boinc    624640 Mar 14 13:39 result.tar.gz
[2026-03-14 13:39:21] -rw-r--r--. 1 boinc boinc      9223 Mar 14 13:39 runtime_log.err
[2026-03-14 13:39:21] -rw-------. 1 boinc boinc       659 Mar 14 13:39 fxIKDm0S9K9n9Rq4apOajLDm4fhM0noT9bVooX4SDmDEmLDmOts0Sm.diag
[2026-03-14 13:39:21] -rw-r--r--. 1 boinc boinc     21086 Mar 14 13:39 stderr.txt
[2026-03-14 13:39:21] HITS file was successfully produced:
[2026-03-14 13:39:21] -rw-------. 1 boinc boinc 187364096 Mar 14 13:38 shared/HITS.pool.root.1
[2026-03-14 13:39:21]  *** Contents of shared directory: ***
[2026-03-14 13:39:22] total 614104
[2026-03-14 13:39:22] -rw-r--r--. 2 boinc boinc 440224061 Mar 14 13:13 ATLAS.root_0
[2026-03-14 13:39:22] -rw-r--r--. 2 boinc boinc     15845 Mar 14 13:13 start_atlas.sh
[2026-03-14 13:39:22] -rw-r--r--. 2 boinc boinc    597537 Mar 14 13:13 input.tar.gz
[2026-03-14 13:39:22] -rw-------. 1 boinc boinc 187364096 Mar 14 13:38 HITS.pool.root.1
[2026-03-14 13:39:22] -rw-------. 1 boinc boinc    624640 Mar 14 13:39 result.tar.gz
13:39:23 (1392333): run_atlas exited; CPU time 15912.702207
13:39:23 (1392333): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN