Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:12:11 (3716271): wrapper (7.7.26015): starting
16:12:11 (3716271): wrapper: running run_atlas (--nthreads 4)
[2026-03-14 16:12:11] Arguments: --nthreads 4
[2026-03-14 16:12:11] Threads: 4
[2026-03-14 16:12:11] Checking for CVMFS
[2026-03-14 16:12:11] No cvmfs_config command found, will try listing directly
[2026-03-14 16:12:11] CVMFS is ok
[2026-03-14 16:12:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 16:12:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 16:12:11] Further information can be found at the LHC@home message board.
[2026-03-14 16:12:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 16:12:11] Checking for apptainer binary...
[2026-03-14 16:12:11] which: no apptainer in ((null))
[2026-03-14 16:12:11] apptainer is not installed, using version from CVMFS
[2026-03-14 16:12:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 16:12:11] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot224/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut20.grid.cesnet.cz
[2026-03-14 16:12:11] apptainer works
[2026-03-14 16:12:11] Set ATHENA_PROC_NUMBER=4
[2026-03-14 16:12:11] Set ATHENA_CORE_NUMBER=4
[2026-03-14 16:12:11] Starting ATLAS job with PandaID=7053355448
[2026-03-14 16:12:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot224/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 17:51:40]  *** The last 200 lines of the pilot log: ***
[2026-03-14 17:51:40]  status_code=0
[2026-03-14 17:51:40]  storage_token=
[2026-03-14 17:51:40]  surl=/var/lib/boinc/var/slot224/slots/0/PanDA_Pilot-7053355448/log.48967085._020807.job.log.tgz.1
[2026-03-14 17:51:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/09/80/log.48967085._020807.job.log.tgz.1
[2026-03-14 17:51:40]  workdir=None
[2026-03-14 17:51:40] ]
[2026-03-14 17:51:40] 2026-03-14 16:50:41,945 | INFO     | transferring file log.48967085._020807.job.log.tgz.1 from /var/lib/boinc/var/slot224/slots/0/PanDA_Pilot-7053355448/log.48967085._020807.job.log.tgz.1 to /var/lib/
[2026-03-14 17:51:40] 2026-03-14 16:50:41,946 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot224/slots/0/PanDA_Pilot-7053355448/log.48967085._020807.job.log.tgz.1 /var/lib/boinc/var/slot224/slots/0/
[2026-03-14 17:51:40] 2026-03-14 16:50:41,964 | INFO     | adding to output.list: log.48967085._020807.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/09/80/log.48967085._020807.job.log.tg
[2026-03-14 17:51:40] 2026-03-14 16:50:41,964 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-14 17:51:40] 2026-03-14 16:50:41,965 | INFO     | summary of transferred files:
[2026-03-14 17:51:40] 2026-03-14 16:50:41,965 | INFO     |  -- lfn=log.48967085._020807.job.log.tgz.1, status_code=0, status=transferred
[2026-03-14 17:51:40] 2026-03-14 16:50:41,965 | INFO     | stage-out finished correctly
[2026-03-14 17:51:40] 2026-03-14 16:50:42,367 | INFO     | time since job start (5898s) is within the limit (345600.0s)
[2026-03-14 17:51:40] 2026-03-14 16:50:44,372 | INFO     | time since job start (5900s) is within the limit (345600.0s)
[2026-03-14 17:51:40] 2026-03-14 16:50:44,950 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 17:51:40] 2026-03-14 16:50:45,703 | WARNING  | process 3736839 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 17:51:40] 2026-03-14 16:50:45,703 | INFO     | using path: /var/lib/boinc/var/slot224/slots/0/PanDA_Pilot-7053355448/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 17:51:40] 2026-03-14 16:50:45,704 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2557677 B
[2026-03-14 17:51:40] 2026-03-14 16:50:45,704 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15857 B
[2026-03-14 17:51:40] 2026-03-14 16:50:45,704 | INFO     | executing command: df -mP /var/lib/boinc/var/slot224/slots/0
[2026-03-14 17:51:40] 2026-03-14 16:50:45,716 | INFO     | sufficient remaining disk space (20113784832 B)
[2026-03-14 17:51:40] 2026-03-14 16:50:45,716 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-03-14 17:51:40] 2026-03-14 16:50:45,716 | INFO     | size of work directory /var/lib/boinc/var/slot224/slots/0/PanDA_Pilot-7053355448: 2865397 B (within 5033164800 B limit)
[2026-03-14 17:51:40] 2026-03-14 16:50:45,716 | INFO     | pfn file=/var/lib/boinc/var/slot224/slots/0/PanDA_Pilot-7053355448/HITS.48967085._020807.pool.root.1 does not exist (skip from workdir size calculation)
[2026-03-14 17:51:40] 2026-03-14 16:50:45,716 | INFO     | total size of present files: 0 B (workdir size: 2865397 B)
[2026-03-14 17:51:40] 2026-03-14 16:50:45,717 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot224/slots/0/PanDA_Pilot-7053355448/HITS.48967085._020807.pool.root.1 since it does not exist
[2026-03-14 17:51:40] 2026-03-14 16:50:46,194 | INFO     | number of running child processes to parent process 3736839: 1
[2026-03-14 17:51:40] 2026-03-14 16:50:46,194 | INFO     | maximum number of monitored processes: 6
[2026-03-14 17:51:40] 2026-03-14 16:50:46,377 | INFO     | time since job start (5902s) is within the limit (345600.0s)
[2026-03-14 17:51:40] 2026-03-14 16:50:46,732 | INFO     | job 7053355448 has state=finished
[2026-03-14 17:51:40] 2026-03-14 16:50:46,732 | INFO     | preparing for final server update for job 7053355448 in state='finished'
[2026-03-14 17:51:40] 2026-03-14 16:50:46,733 | INFO     | reading metadata from: /var/lib/boinc/var/slot224/slots/0/PanDA_Pilot-7053355448/jobReport.json
[2026-03-14 17:51:40] 2026-03-14 16:50:46,734 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot224/slots/0/workernode_map.json
[2026-03-14 17:51:40] 2026-03-14 16:50:46,734 | INFO     | this job has now completed (state=finished)
[2026-03-14 17:51:40] 2026-03-14 16:50:46,735 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 17:51:40] 2026-03-14 16:50:46,735 | INFO     | log transfer has been attempted: DONE
[2026-03-14 17:51:40] 2026-03-14 16:50:46,735 | INFO     | job 7053355448 has finished - writing final server update
[2026-03-14 17:51:40] 2026-03-14 16:50:46,735 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2118595/.job.ad'
[2026-03-14 17:51:40] 2026-03-14 16:50:46,735 | INFO     | total number of processed events: 400 (read)
[2026-03-14 17:51:40] 2026-03-14 16:50:46,753 | INFO     | using path: /var/lib/boinc/var/slot224/slots/0/PanDA_Pilot-7053355448/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 17:51:40] 2026-03-14 16:50:46,753 | INFO     | extracted standard info from prmon json
[2026-03-14 17:51:40] 2026-03-14 16:50:46,753 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 17:51:40] 2026-03-14 16:50:46,753 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 17:51:40] 2026-03-14 16:50:46,753 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 17:51:40] 2026-03-14 16:50:46,753 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 17:51:40] 2026-03-14 16:50:46,755 | INFO     | fitting pss+swap vs Time
[2026-03-14 17:51:40] 2026-03-14 16:50:46,755 | INFO     | sum of square deviations: 226022842.5
[2026-03-14 17:51:40] 2026-03-14 16:50:46,755 | INFO     | sum of deviations: 1381593300.5
[2026-03-14 17:51:40] 2026-03-14 16:50:46,755 | INFO     | mean x: 1773504184.5
[2026-03-14 17:51:40] 2026-03-14 16:50:46,755 | INFO     | mean y: 2327441.5222222223
[2026-03-14 17:51:40] 2026-03-14 16:50:46,755 | INFO     | intersect: -10838441892.284895
[2026-03-14 17:51:40] 2026-03-14 16:50:46,755 | INFO     | chi2: 0.0005124705186014087
[2026-03-14 17:51:40] 2026-03-14 16:50:46,755 | INFO     | current memory leak: 6.11 B/s (using 90 data points, chi2=0.00)
[2026-03-14 17:51:40] 2026-03-14 16:50:46,756 | INFO     | could have reported an average CPU frequency of 3561 MHz (7 samples)
[2026-03-14 17:51:40] 2026-03-14 16:50:46,756 | INFO     | ..............................
[2026-03-14 17:51:40] 2026-03-14 16:50:46,756 | INFO     | . Timing measurements:
[2026-03-14 17:51:40] 2026-03-14 16:50:46,756 | INFO     | . get job = 0 s
[2026-03-14 17:51:40] 2026-03-14 16:50:46,756 | INFO     | . initial setup = 5 s
[2026-03-14 17:51:40] 2026-03-14 16:50:46,756 | INFO     | . payload setup = 5 s
[2026-03-14 17:51:40] 2026-03-14 16:50:46,756 | INFO     | . stage-in = 0 s
[2026-03-14 17:51:40] 2026-03-14 16:50:46,756 | INFO     | . payload execution = 5877 s
[2026-03-14 17:51:40] 2026-03-14 16:50:46,756 | INFO     | . stage-out = 0 s
[2026-03-14 17:51:40] 2026-03-14 16:50:46,756 | INFO     | . log creation = 0 s
[2026-03-14 17:51:40] 2026-03-14 16:50:46,756 | INFO     | ..............................
[2026-03-14 17:51:40] 2026-03-14 16:50:46,806 | INFO     | 
[2026-03-14 17:51:40] 2026-03-14 16:50:46,806 | INFO     | job summary report
[2026-03-14 17:51:40] 2026-03-14 16:50:46,806 | INFO     | --------------------------------------------------
[2026-03-14 17:51:40] 2026-03-14 16:50:46,806 | INFO     | PanDA job id: 7053355448
[2026-03-14 17:51:40] 2026-03-14 16:50:46,806 | INFO     | task id: 48967085
[2026-03-14 17:51:40] 2026-03-14 16:50:46,806 | INFO     | errors: (none)
[2026-03-14 17:51:40] 2026-03-14 16:50:46,806 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 17:51:40] 2026-03-14 16:50:46,806 | INFO     | pilot state: finished 
[2026-03-14 17:51:40] 2026-03-14 16:50:46,806 | INFO     | transexitcode: 0
[2026-03-14 17:51:40] 2026-03-14 16:50:46,806 | INFO     | exeerrorcode: 0
[2026-03-14 17:51:40] 2026-03-14 16:50:46,807 | INFO     | exeerrordiag: 
[2026-03-14 17:51:40] 2026-03-14 16:50:46,807 | INFO     | exitcode: 0
[2026-03-14 17:51:40] 2026-03-14 16:50:46,807 | INFO     | exitmsg: OK
[2026-03-14 17:51:40] 2026-03-14 16:50:46,807 | INFO     | cpuconsumptiontime: 22679 s
[2026-03-14 17:51:40] 2026-03-14 16:50:46,807 | INFO     | nevents: 400
[2026-03-14 17:51:40] 2026-03-14 16:50:46,807 | INFO     | neventsw: 0
[2026-03-14 17:51:40] 2026-03-14 16:50:46,807 | INFO     | pid: 3736839
[2026-03-14 17:51:40] 2026-03-14 16:50:46,807 | INFO     | pgrp: 3736839
[2026-03-14 17:51:40] 2026-03-14 16:50:46,807 | INFO     | corecount: 4
[2026-03-14 17:51:40] 2026-03-14 16:50:46,807 | INFO     | event service: False
[2026-03-14 17:51:40] 2026-03-14 16:50:46,807 | INFO     | sizes: {0: 2280204, 11: 2280204, 5886: 2306938, 5887: 2315960, 5890: 2316016, 5891: 2316238}
[2026-03-14 17:51:40] 2026-03-14 16:50:46,807 | INFO     | --------------------------------------------------
[2026-03-14 17:51:40] 2026-03-14 16:50:46,807 | INFO     | 
[2026-03-14 17:51:40] 2026-03-14 16:50:46,807 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot224/slots/0
[2026-03-14 17:51:40] 2026-03-14 16:50:46,823 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 17:51:40] 2026-03-14 16:50:46,823 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 17:51:40] 2026-03-14 16:50:46,823 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 17:51:40] 2026-03-14 16:50:46,823 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 17:51:40] 2026-03-14 16:50:46,823 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 17:51:40] 2026-03-14 16:50:46,823 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 17:51:40] 2026-03-14 16:50:46,823 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 17:51:40] 2026-03-14 16:50:46,823 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 17:51:40] 2026-03-14 16:50:46,823 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 17:51:40] 2026-03-14 16:50:46,823 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 17:51:40] 2026-03-14 16:50:46,823 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 17:51:40] 2026-03-14 16:50:46,823 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 17:51:40] 2026-03-14 16:50:46,823 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 17:51:40] 2026-03-14 16:50:46,823 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 17:51:40] 2026-03-14 16:50:46,823 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 17:51:40] 2026-03-14 16:50:46,824 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 17:51:40] 2026-03-14 16:50:46,824 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 17:51:40] 2026-03-14 16:50:46,824 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 17:51:40] 2026-03-14 16:50:46,824 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 17:51:40] 2026-03-14 16:50:46,824 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 17:51:40] 2026-03-14 16:50:46,824 | INFO     | job 7053355448 has completed (purged errors)
[2026-03-14 17:51:40] 2026-03-14 16:50:46,824 | INFO     | overall cleanup function is called
[2026-03-14 17:51:40] 2026-03-14 16:50:47,831 | INFO     | --- collectZombieJob: --- 10, [3736839]
[2026-03-14 17:51:40] 2026-03-14 16:50:47,831 | INFO     | zombie collector waiting for pid 3736839
[2026-03-14 17:51:40] 2026-03-14 16:50:47,831 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 17:51:40] 2026-03-14 16:50:47,831 | INFO     | collected zombie processes
[2026-03-14 17:51:40] 2026-03-14 16:50:47,831 | INFO     | will attempt to kill all subprocesses of pid=3736839
[2026-03-14 17:51:40] 2026-03-14 16:50:48,307 | INFO     | process IDs to be killed: [3736839] (in reverse order)
[2026-03-14 17:51:40] 2026-03-14 16:50:48,555 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 17:51:40] 2026-03-14 16:50:48,555 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 17:51:40] 2026-03-14 16:50:48,587 | INFO     | did not find any defunct processes belonging to 3736839
[2026-03-14 17:51:40] 2026-03-14 16:50:48,617 | INFO     | did not find any defunct processes belonging to 3736839
[2026-03-14 17:51:40] 2026-03-14 16:50:48,625 | INFO     | ready for new job
[2026-03-14 17:51:40] 2026-03-14 16:50:48,625 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 17:51:40] 2026-03-14 16:50:48,626 | INFO     | **************************************
[2026-03-14 17:51:40] 2026-03-14 16:50:48,627 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 17:51:40] 2026-03-14 16:50:48,627 | INFO     | **************************************
[2026-03-14 17:51:40] 2026-03-14 16:50:48,627 | INFO     | 
[2026-03-14 17:51:40] 2026-03-14 16:50:48,633 | INFO     | architecture information:
[2026-03-14 17:51:40] 2026-03-14 16:50:48,634 | INFO     | executing command: cat /etc/os-release
[2026-03-14 17:51:40] 2026-03-14 16:50:48,654 | INFO     | cat /etc/os-release:
[2026-03-14 17:51:40] NAME="CentOS Linux"
[2026-03-14 17:51:40] VERSION="7 (Core)"
[2026-03-14 17:51:40] ID="centos"
[2026-03-14 17:51:40] ID_LIKE="rhel fedora"
[2026-03-14 17:51:40] VERSION_ID="7"
[2026-03-14 17:51:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 17:51:40] ANSI_COLOR="0;31"
[2026-03-14 17:51:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 17:51:40] HOME_URL="https://www.centos.org/"
[2026-03-14 17:51:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 17:51:40] 
[2026-03-14 17:51:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 17:51:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 17:51:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 17:51:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 17:51:40] 
[2026-03-14 17:51:40] 2026-03-14 16:50:48,655 | INFO     | **************************************
[2026-03-14 17:51:40] 2026-03-14 16:50:49,157 | INFO     | executing command: df -mP /var/lib/boinc/var/slot224/slots/0
[2026-03-14 17:51:40] 2026-03-14 16:50:49,173 | INFO     | sufficient remaining disk space (20113784832 B)
[2026-03-14 17:51:40] 2026-03-14 16:50:49,173 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 17:51:40] 2026-03-14 16:50:49,173 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 17:51:40] 2026-03-14 16:50:49,173 | INFO     | update_server=False
[2026-03-14 17:51:40] 2026-03-14 16:50:49,173 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 17:51:40] 2026-03-14 16:50:49,231 | INFO     | all payload control threads have been joined
[2026-03-14 17:51:40] 2026-03-14 16:50:49,703 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 17:51:40] 2026-03-14 16:50:49,703 | INFO     | aborting loop
[2026-03-14 17:51:40] 2026-03-14 16:50:50,021 | INFO     | all data control threads have been joined
[2026-03-14 17:51:40] 2026-03-14 16:50:50,024 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 17:51:40] 2026-03-14 16:50:50,178 | INFO     | [job] retrieve thread has finished
[2026-03-14 17:51:40] 2026-03-14 16:50:50,187 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 17:51:40] 2026-03-14 16:50:50,220 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 17:51:40] 2026-03-14 16:50:50,236 | INFO     | [payload] control thread has finished
[2026-03-14 17:51:40] 2026-03-14 16:50:50,246 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 17:51:40] 2026-03-14 16:50:50,309 | INFO     | [job] validate thread has finished
[2026-03-14 17:51:40] 2026-03-14 16:50:50,310 | INFO     | all job control threads have been joined
[2026-03-14 17:51:40] 2026-03-14 16:50:50,418 | INFO     | [payload] validate_post thread has finished
[2026-03-14 17:51:40] 2026-03-14 16:50:50,708 | INFO     | [job] job monitor thread has finished
[2026-03-14 17:51:40] 2026-03-14 16:50:50,775 | INFO     | [data] copytool_in thread has finished
[2026-03-14 17:51:40] 2026-03-14 16:50:50,973 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 17:51:40] 2026-03-14 16:50:51,004 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 17:51:40] 2026-03-14 16:50:51,026 | INFO     | [data] control thread has finished
[2026-03-14 17:51:40] 2026-03-14 16:50:51,315 | INFO     | [job] control thread has finished
[2026-03-14 17:51:40] 2026-03-14 16:50:51,543 | INFO     | [payload] failed_post thread has finished
[2026-03-14 17:51:40] 2026-03-14 16:50:51,820 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 17:51:40] 2026-03-14 16:50:52,029 | INFO     | [data] copytool_out thread has finished
[2026-03-14 17:51:40] 2026-03-14 16:50:52,825 | INFO     | [job] queue monitor thread has finished
[2026-03-14 17:51:40] 2026-03-14 16:50:55,009 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 17:51:40] 2026-03-14 16:51:20,026 | INFO     | PID=3722478 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 17:51:40] 2026-03-14 16:51:20,026 | INFO     | .. there are 49 such processes running
[2026-03-14 17:51:40] 2026-03-14 16:51:20,027 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 17:51:40] 2026-03-14 16:51:20,027 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 17:51:40] 2026-03-14 16:51:20,027 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 17:51:40] 2026-03-14 16:51:33,410 | INFO     | [monitor] cgroup control has ended
[2026-03-14 17:51:40] 2026-03-14 16:51:34,633 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22423411418944)>', '<ExcThread(monitor, started 22423165728512)>']
[2026-03-14 17:51:40] 2026-03-14 16:51:35,101 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 17:51:40] 2026-03-14 16:51:35,101 | INFO     | [monitor] control thread has ended
[2026-03-14 17:51:40] 2026-03-14 16:51:39,658 | INFO     | all workflow threads have been joined
[2026-03-14 17:51:40] 2026-03-14 16:51:39,658 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 17:51:40] 2026-03-14 16:51:39,658 | INFO     | traces error code: 0
[2026-03-14 17:51:40] 2026-03-14 16:51:39,658 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 17:51:40] 2026-03-14 16:51:39,835 [wrapper] ==== pilot stdout END ====
[2026-03-14 17:51:40] 2026-03-14 16:51:39,838 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 17:51:40] 2026-03-14 16:51:39,840 [wrapper] pilotpid: 3722478
[2026-03-14 17:51:40] 2026-03-14 16:51:39,843 [wrapper] Pilot exit status: 0
[2026-03-14 17:51:40] 2026-03-14 16:51:39,852 [wrapper] pandaids: 7053355448
[2026-03-14 17:51:40] 2026-03-14 16:51:39,987 [wrapper] cleanup supervisor_pilot  459326 3722479
[2026-03-14 17:51:40] 2026-03-14 16:51:39,989 [wrapper] Test setup, not cleaning
[2026-03-14 17:51:40] 2026-03-14 16:51:39,992 [wrapper] apfmon messages muted
[2026-03-14 17:51:40] 2026-03-14 16:51:39,994 [wrapper] ==== wrapper stdout END ====
[2026-03-14 17:51:40] 2026-03-14 16:51:39,996 [wrapper] ==== wrapper stderr END ====
[2026-03-14 17:51:40]  *** Error codes and diagnostics ***
[2026-03-14 17:51:40]     "exeErrorCode": 0,
[2026-03-14 17:51:40]     "exeErrorDiag": "",
[2026-03-14 17:51:40]     "pilotErrorCode": 0,
[2026-03-14 17:51:40]     "pilotErrorDiag": "",
[2026-03-14 17:51:40]  *** Listing of results directory ***
[2026-03-14 17:51:40] total 408560
[2026-03-14 17:51:40] -rw-r--r--. 1 boinc boinc    585013 Mar 13 12:56 pilot3.tar.gz
[2026-03-14 17:51:40] -rwx------. 1 boinc boinc     36322 Mar 13 12:57 runpilot2-wrapper.sh
[2026-03-14 17:51:40] -rw-r--r--. 1 boinc boinc      5111 Mar 13 12:57 queuedata.json
[2026-03-14 17:51:40] -rw-r--r--. 1 boinc boinc       100 Mar 14 16:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 17:51:40] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 16:12 run_atlas
[2026-03-14 17:51:40] -rw-r--r--. 1 boinc boinc       105 Mar 14 16:12 job.xml
[2026-03-14 17:51:40] -rw-r--r--. 1 boinc boinc      6709 Mar 14 16:12 init_data.xml
[2026-03-14 17:51:40] -rw-r--r--. 2 boinc boinc 213290260 Mar 14 16:12 EVNT.48967083._000696.pool.root.1
[2026-03-14 17:51:40] -rw-r--r--. 2 boinc boinc     15845 Mar 14 16:12 start_atlas.sh
[2026-03-14 17:51:40] drwxrwx--x. 2 boinc boinc      4096 Mar 14 16:12 shared
[2026-03-14 17:51:40] -rw-r--r--. 2 boinc boinc    597528 Mar 14 16:12 input.tar.gz
[2026-03-14 17:51:40] -rw-r--r--. 1 boinc boinc         0 Mar 14 16:12 boinc_lockfile
[2026-03-14 17:51:40] -rw-r--r--. 1 boinc boinc      2563 Mar 14 16:12 pandaJob.out
[2026-03-14 17:51:40] -rw-------. 1 boinc boinc   1004579 Mar 14 16:12 agis_schedconf.cvmfs.json
[2026-03-14 17:51:40] -rw-------. 1 boinc boinc   1511579 Mar 14 16:12 agis_ddmendpoints.agis.ALL.json
[2026-03-14 17:51:40] -rw-------. 1 boinc boinc       444 Mar 14 16:12 workernode_map.json
[2026-03-14 17:51:40] drwx------. 5 boinc boinc      4096 Mar 14 16:12 pilot3
[2026-03-14 17:51:40] -rw-------. 1 boinc boinc 198854682 Mar 14 17:50 HITS.48967085._020807.pool.root.1
[2026-03-14 17:51:40] -rw-r--r--. 1 boinc boinc       529 Mar 14 17:50 boinc_task_state.xml
[2026-03-14 17:51:40] -rw-------. 1 boinc boinc      1031 Mar 14 17:50 memory_monitor_summary.json
[2026-03-14 17:51:40] -rw-------. 1 boinc boinc    290643 Mar 14 17:50 log.48967085._020807.job.log.tgz.1
[2026-03-14 17:51:40] -rw-------. 1 boinc boinc      6354 Mar 14 17:50 heartbeat.json
[2026-03-14 17:51:40] -rw-r--r--. 1 boinc boinc        27 Mar 14 17:51 wrapper_checkpoint.txt
[2026-03-14 17:51:40] -rw-r--r--. 1 boinc boinc      8192 Mar 14 17:51 boinc_mmap_file
[2026-03-14 17:51:40] -rw-------. 1 boinc boinc        95 Mar 14 17:51 pilot_heartbeat.json
[2026-03-14 17:51:40] -rw-------. 1 boinc boinc      4830 Mar 14 17:51 pilotlog.txt
[2026-03-14 17:51:40] -rw-------. 1 boinc boinc    852665 Mar 14 17:51 log.48967085._020807.job.log.1
[2026-03-14 17:51:40] -rw-------. 1 boinc boinc       357 Mar 14 17:51 output.list
[2026-03-14 17:51:40] -rw-r--r--. 1 boinc boinc       620 Mar 14 17:51 runtime_log
[2026-03-14 17:51:40] -rw-------. 1 boinc boinc   1157120 Mar 14 17:51 result.tar.gz
[2026-03-14 17:51:40] -rw-r--r--. 1 boinc boinc      9221 Mar 14 17:51 runtime_log.err
[2026-03-14 17:51:40] -rw-------. 1 boinc boinc       663 Mar 14 17:51 HBiLDm1JGL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmKqmLDmG7t2hn.diag
[2026-03-14 17:51:40] -rw-r--r--. 1 boinc boinc     22311 Mar 14 17:51 stderr.txt
[2026-03-14 17:51:40] HITS file was successfully produced:
[2026-03-14 17:51:40] -rw-------. 1 boinc boinc 198854682 Mar 14 17:50 shared/HITS.pool.root.1
[2026-03-14 17:51:40]  *** Contents of shared directory: ***
[2026-03-14 17:51:40] total 404228
[2026-03-14 17:51:40] -rw-r--r--. 2 boinc boinc 213290260 Mar 14 16:12 ATLAS.root_0
[2026-03-14 17:51:40] -rw-r--r--. 2 boinc boinc     15845 Mar 14 16:12 start_atlas.sh
[2026-03-14 17:51:40] -rw-r--r--. 2 boinc boinc    597528 Mar 14 16:12 input.tar.gz
[2026-03-14 17:51:40] -rw-------. 1 boinc boinc 198854682 Mar 14 17:50 HITS.pool.root.1
[2026-03-14 17:51:40] -rw-------. 1 boinc boinc   1157120 Mar 14 17:51 result.tar.gz
17:51:41 (3716271): run_atlas exited; CPU time 22952.141491
17:51:41 (3716271): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN