Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:02:56 (3328034): wrapper (7.7.26015): starting
14:02:56 (3328034): wrapper: running run_atlas (--nthreads 3)
[2026-03-13 14:02:56] Arguments: --nthreads 3
[2026-03-13 14:02:56] Threads: 3
[2026-03-13 14:02:56] Checking for CVMFS
[2026-03-13 14:02:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 14:02:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 14:02:56] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 14:02:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 14:02:57] 2.9.2.0 37031 22804 88924 157240 1 50 22163579 36864001 0 130560 0 9275707 99.983 850467 14603 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-13 14:02:57] CVMFS is ok
[2026-03-13 14:02:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 14:02:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 14:02:57] Further information can be found at the LHC@home message board.
[2026-03-13 14:02:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 14:02:57] Checking for apptainer binary...
[2026-03-13 14:02:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 14:02:57] Running /usr/bin/apptainer --version
[2026-03-13 14:02:57] apptainer version 1.4.1-1.1
[2026-03-13 14:02:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 14:02:57] cosA125b
[2026-03-13 14:02:57] apptainer works
[2026-03-13 14:02:57] Set ATHENA_PROC_NUMBER=3
[2026-03-13 14:02:57] Set ATHENA_CORE_NUMBER=3
[2026-03-13 14:02:57] Starting ATLAS job with PandaID=7043760097
[2026-03-13 14:02:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 15:20:17]  *** The last 200 lines of the pilot log: ***
[2026-03-13 15:20:17] 2026-03-13 14:19:20,726 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 15:20:17] 2026-03-13 14:19:20,775 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-13 15:20:17] 2026-03-13 14:19:20,775 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-13 15:20:17] 2026-03-13 14:19:20,775 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 15:20:17] 2026-03-13 14:19:20,775 | INFO     | will abort loop
[2026-03-13 15:20:17] 2026-03-13 14:19:21,621 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 15:20:17] 2026-03-13 14:19:21,641 | INFO     | all data control threads have been joined
[2026-03-13 15:20:17] 2026-03-13 14:19:21,729 | INFO     | [job] queue monitor thread has finished
[2026-03-13 15:20:17] 2026-03-13 14:19:21,731 | INFO     | [job] retrieve thread has finished
[2026-03-13 15:20:17] 2026-03-13 14:19:21,781 | INFO     | [job] job monitor thread has finished
[2026-03-13 15:20:17] 2026-03-13 14:19:21,869 | INFO     | [data] copytool_in thread has finished
[2026-03-13 15:20:17] 2026-03-13 14:19:21,908 | INFO     | all payload control threads have been joined
[2026-03-13 15:20:17] 2026-03-13 14:19:22,050 | INFO     | all job control threads have been joined
[2026-03-13 15:20:17] 2026-03-13 14:19:22,315 | INFO     | [payload] failed_post thread has finished
[2026-03-13 15:20:17] 2026-03-13 14:19:22,647 | INFO     | [data] control thread has finished
[2026-03-13 15:20:17] 2026-03-13 14:19:22,820 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 15:20:17] 2026-03-13 14:19:22,914 | INFO     | [payload] control thread has finished
[2026-03-13 15:20:17] 2026-03-13 14:19:23,017 | INFO     | [job] validate thread has finished
[2026-03-13 15:20:17] 2026-03-13 14:19:23,056 | INFO     | [job] control thread has finished
[2026-03-13 15:20:17] 2026-03-13 14:19:23,103 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 15:20:17] 2026-03-13 14:19:23,107 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 15:20:17] 2026-03-13 14:19:23,245 | INFO     | [payload] validate_post thread has finished
[2026-03-13 15:20:17] 2026-03-13 14:19:23,627 | INFO     | [data] copytool_out thread has finished
[2026-03-13 15:20:17] 2026-03-13 14:19:24,732 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 15:20:17] 2026-03-13 14:19:31,157 | INFO     | job.realtimelogging is not enabled
[2026-03-13 15:20:17] 2026-03-13 14:19:32,163 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 15:20:17] 2026-03-13 14:19:50,640 | INFO     | PID=3332075 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-13 15:20:17] 2026-03-13 14:19:50,640 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 15:20:17] 2026-03-13 14:19:50,640 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 15:20:17] 2026-03-13 14:19:50,640 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 15:20:17] 2026-03-13 14:20:11,097 | INFO     | [monitor] cgroup control has ended
[2026-03-13 15:20:17] 2026-03-13 14:20:12,404 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140430190167872)>', '<ExcThread(monitor, started 140429710317312)>']
[2026-03-13 15:20:17] 2026-03-13 14:20:12,749 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 15:20:17] 2026-03-13 14:20:12,749 | INFO     | [monitor] control thread has ended
[2026-03-13 15:20:17] 2026-03-13 14:20:17,427 | INFO     | all workflow threads have been joined
[2026-03-13 15:20:17] 2026-03-13 14:20:17,428 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 15:20:17] 2026-03-13 14:20:17,428 | INFO     | traces error code: 0
[2026-03-13 15:20:17] 2026-03-13 14:20:17,428 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 15:20:17] 2026-03-13 14:20:17,478 [wrapper] ==== pilot stdout END ====
[2026-03-13 15:20:17] 2026-03-13 14:20:17,480 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 15:20:17] 2026-03-13 14:20:17,483 [wrapper] pilotpid: 3332075
[2026-03-13 15:20:17] 2026-03-13 14:20:17,485 [wrapper] Pilot exit status: 0
[2026-03-13 15:20:17] 2026-03-13 14:20:17,492 [wrapper] pandaids: 7043760097
[2026-03-13 15:20:17] 2026-03-13 14:20:17,508 [wrapper] cleanup supervisor_pilot 3341708 3332076
[2026-03-13 15:20:17] 2026-03-13 14:20:17,510 [wrapper] Test setup, not cleaning
[2026-03-13 15:20:17] 2026-03-13 14:20:17,513 [wrapper] apfmon messages muted
[2026-03-13 15:20:17] 2026-03-13 14:20:17,515 [wrapper] ==== wrapper stdout END ====
[2026-03-13 15:20:17] 2026-03-13 14:20:17,517 [wrapper] ==== wrapper stderr END ====
[2026-03-13 15:20:17]  *** Error codes and diagnostics ***
[2026-03-13 15:20:17]     "exeErrorCode": 0,
[2026-03-13 15:20:17]     "exeErrorDiag": "",
[2026-03-13 15:20:17]     "pilotErrorCode": 0,
[2026-03-13 15:20:17]     "pilotErrorDiag": "",
[2026-03-13 15:20:17]  *** Listing of results directory ***
[2026-03-13 15:20:17] total 611440
[2026-03-13 15:20:17] -rw-r--r-- 1 boinc boinc    585013 Mar 13 05:05 pilot3.tar.gz
[2026-03-13 15:20:17] -rwx------ 1 boinc boinc     36322 Mar 13 05:09 runpilot2-wrapper.sh
[2026-03-13 15:20:17] -rw-r--r-- 1 boinc boinc      5111 Mar 13 05:10 queuedata.json
[2026-03-13 15:20:17] -rw-r--r-- 1 boinc boinc       100 Mar 13 14:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 15:20:17] -rwxr-xr-x 1 boinc boinc      7986 Mar 13 14:02 run_atlas
[2026-03-13 15:20:17] -rw-r--r-- 1 boinc boinc       105 Mar 13 14:02 job.xml
[2026-03-13 15:20:17] -rw-r--r-- 2 boinc boinc 438540105 Mar 13 14:02 EVNT.46701403._001535.pool.root.1
[2026-03-13 15:20:17] -rw-r--r-- 2 boinc boinc    597529 Mar 13 14:02 input.tar.gz
[2026-03-13 15:20:17] -rw-r--r-- 2 boinc boinc     15845 Mar 13 14:02 start_atlas.sh
[2026-03-13 15:20:17] drwxrwx--x 2 boinc boinc      4096 Mar 13 14:02 shared
[2026-03-13 15:20:17] -rw-r--r-- 1 boinc boinc         0 Mar 13 14:02 boinc_setup_complete
[2026-03-13 15:20:17] -rw-r--r-- 1 boinc boinc      6440 Mar 13 14:02 init_data.xml
[2026-03-13 15:20:17] -rw-r--r-- 1 boinc boinc         0 Mar 13 14:02 boinc_lockfile
[2026-03-13 15:20:17] -rw-r--r-- 1 boinc boinc      2563 Mar 13 14:02 pandaJob.out
[2026-03-13 15:20:17] -rw------- 1 boinc boinc   1006473 Mar 13 14:03 agis_schedconf.cvmfs.json
[2026-03-13 15:20:17] -rw------- 1 boinc boinc   1511578 Mar 13 14:03 agis_ddmendpoints.agis.ALL.json
[2026-03-13 15:20:17] -rw------- 1 boinc boinc       421 Mar 13 14:03 workernode_map.json
[2026-03-13 15:20:17] drwx------ 5 boinc boinc      4096 Mar 13 14:03 pilot3
[2026-03-13 15:20:17] -rw------- 1 boinc boinc 181782643 Mar 13 15:18 HITS.48955010._027058.pool.root.1
[2026-03-13 15:20:17] -rw-r--r-- 1 boinc boinc       530 Mar 13 15:19 boinc_task_state.xml
[2026-03-13 15:20:17] -rw------- 1 boinc boinc      1016 Mar 13 15:19 memory_monitor_summary.json
[2026-03-13 15:20:17] -rw------- 1 boinc boinc    260426 Mar 13 15:19 log.48955010._027058.job.log.tgz.1
[2026-03-13 15:20:17] -rw------- 1 boinc boinc      6306 Mar 13 15:19 heartbeat.json
[2026-03-13 15:20:17] -rw------- 1 boinc boinc        95 Mar 13 15:19 pilot_heartbeat.json
[2026-03-13 15:20:17] -rw-r--r-- 1 boinc boinc        27 Mar 13 15:19 wrapper_checkpoint.txt
[2026-03-13 15:20:17] -rw-r--r-- 1 boinc boinc      8192 Mar 13 15:19 boinc_mmap_file
[2026-03-13 15:20:17] -rw------- 1 boinc boinc      5006 Mar 13 15:20 pilotlog.txt
[2026-03-13 15:20:17] -rw------- 1 boinc boinc    675094 Mar 13 15:20 log.48955010._027058.job.log.1
[2026-03-13 15:20:17] -rw------- 1 boinc boinc       357 Mar 13 15:20 output.list
[2026-03-13 15:20:17] -rw-r--r-- 1 boinc boinc       620 Mar 13 15:20 runtime_log
[2026-03-13 15:20:17] -rw------- 1 boinc boinc    952320 Mar 13 15:20 result.tar.gz
[2026-03-13 15:20:17] -rw-r--r-- 1 boinc boinc      8906 Mar 13 15:20 runtime_log.err
[2026-03-13 15:20:17] -rw------- 1 boinc boinc       659 Mar 13 15:20 YxaMDmO18K9n9Rq4apOajLDm4fhM0noT9bVooX4SDmB6lLDmiBqxJn.diag
[2026-03-13 15:20:17] -rw-r--r-- 1 boinc boinc      7392 Mar 13 15:20 stderr.txt
[2026-03-13 15:20:17] HITS file was successfully produced:
[2026-03-13 15:20:17] -rw------- 1 boinc boinc 181782643 Mar 13 15:18 shared/HITS.pool.root.1
[2026-03-13 15:20:17]  *** Contents of shared directory: ***
[2026-03-13 15:20:17] total 607328
[2026-03-13 15:20:17] -rw-r--r-- 2 boinc boinc 438540105 Mar 13 14:02 ATLAS.root_0
[2026-03-13 15:20:17] -rw-r--r-- 2 boinc boinc    597529 Mar 13 14:02 input.tar.gz
[2026-03-13 15:20:17] -rw-r--r-- 2 boinc boinc     15845 Mar 13 14:02 start_atlas.sh
[2026-03-13 15:20:17] -rw------- 1 boinc boinc 181782643 Mar 13 15:18 HITS.pool.root.1
[2026-03-13 15:20:17] -rw------- 1 boinc boinc    952320 Mar 13 15:20 result.tar.gz
15:20:19 (3328034): run_atlas exited; CPU time 13037.194929
15:20:19 (3328034): called boinc_finish(0)

</stderr_txt>
]]>

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