Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:49:00 (12234): wrapper (7.7.26015): starting
00:49:00 (12234): wrapper: running run_atlas (--nthreads 8)
[2026-03-14 00:49:00] Arguments: --nthreads 8
[2026-03-14 00:49:00] Threads: 8
[2026-03-14 00:49:00] Checking for CVMFS
[2026-03-14 00:49:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 00:49:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 00:49:03] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 00:49:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 00:49:04] 2.11.2.0 14084 126815 137768 157258 3 54 17801335 25165824 4511 130560 159 40008407 99.798 29857062 1042 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-14 00:49:04] CVMFS is ok
[2026-03-14 00:49:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 00:49:04] Checking for apptainer binary...
[2026-03-14 00:49:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 00:49:04] Running /usr/bin/apptainer --version
[2026-03-14 00:49:04] apptainer version 1.3.2-1.el7
[2026-03-14 00:49:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 00:49:16] cg-vwn482.simple-grid.lan
[2026-03-14 00:49:16] apptainer works
[2026-03-14 00:49:16] Set ATHENA_PROC_NUMBER=8
[2026-03-14 00:49:16] Set ATHENA_CORE_NUMBER=8
[2026-03-14 00:49:16] Starting ATLAS job with PandaID=7053290573
[2026-03-14 00:49:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 05:29:17]  *** The last 200 lines of the pilot log: ***
[2026-03-14 05:29:17] 2026-03-14 04:28:13,118 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-7053290573/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 05:29:17] 2026-03-14 04:28:13,118 | INFO     | extracted standard info from prmon json
[2026-03-14 05:29:17] 2026-03-14 04:28:13,119 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 05:29:17] 2026-03-14 04:28:13,119 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 05:29:17] 2026-03-14 04:28:13,119 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 05:29:17] 2026-03-14 04:28:13,119 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 05:29:17] 2026-03-14 04:28:13,124 | INFO     | fitting pss+swap vs Time
[2026-03-14 05:29:17] 2026-03-14 04:28:13,125 | INFO     | sum of square deviations: 5770452380.0
[2026-03-14 05:29:17] 2026-03-14 04:28:13,127 | INFO     | sum of deviations: 85363650222.00002
[2026-03-14 05:29:17] 2026-03-14 04:28:13,128 | INFO     | mean x: 1773454413.0
[2026-03-14 05:29:17] 2026-03-14 04:28:13,128 | INFO     | mean y: 2438939.837735849
[2026-03-14 05:29:17] 2026-03-14 04:28:13,128 | INFO     | intersect: -26232686528.08864
[2026-03-14 05:29:17] 2026-03-14 04:28:13,128 | INFO     | chi2: 4.964360982183123
[2026-03-14 05:29:17] 2026-03-14 04:28:13,129 | INFO     | sum of square deviations: 5449944045.0
[2026-03-14 05:29:17] 2026-03-14 04:28:13,131 | INFO     | sum of deviations: 100877917929.5
[2026-03-14 05:29:17] 2026-03-14 04:28:13,131 | INFO     | mean x: 1773454260.5
[2026-03-14 05:29:17] 2026-03-14 04:28:13,132 | INFO     | mean y: 2446194.934615385
[2026-03-14 05:29:17] 2026-03-14 04:28:13,132 | INFO     | intersect: -32824014382.504417
[2026-03-14 05:29:17] 2026-03-14 04:28:13,132 | INFO     | chi2: 4.224774211733857
[2026-03-14 05:29:17] 2026-03-14 04:28:13,132 | INFO     | current chi2=4.224774211733857 (change=14.897924891111083 %)
[2026-03-14 05:29:17] 2026-03-14 04:28:13,132 | INFO     | right removable region: 259
[2026-03-14 05:29:17] 2026-03-14 04:28:13,133 | INFO     | sum of square deviations: 5449944045.0
[2026-03-14 05:29:17] 2026-03-14 04:28:13,135 | INFO     | sum of deviations: 2700413178.5
[2026-03-14 05:29:17] 2026-03-14 04:28:13,136 | INFO     | mean x: 1773454565.5
[2026-03-14 05:29:17] 2026-03-14 04:28:13,136 | INFO     | mean y: 2478206.4961538464
[2026-03-14 05:29:17] 2026-03-14 04:28:13,136 | INFO     | intersect: -876257435.6689926
[2026-03-14 05:29:17] 2026-03-14 04:28:13,136 | INFO     | chi2: 1.161221619008764
[2026-03-14 05:29:17] 2026-03-14 04:28:13,136 | INFO     | current chi2=1.161221619008764 (change=76.6088400264135 %)
[2026-03-14 05:29:17] 2026-03-14 04:28:13,137 | INFO     | sum of square deviations: 5141528960.0
[2026-03-14 05:29:17] 2026-03-14 04:28:13,139 | INFO     | sum of deviations: -15082964920.000002
[2026-03-14 05:29:17] 2026-03-14 04:28:13,139 | INFO     | mean x: 1773454718.0
[2026-03-14 05:29:17] 2026-03-14 04:28:13,140 | INFO     | mean y: 2486913.066666667
[2026-03-14 05:29:17] 2026-03-14 04:28:13,140 | INFO     | intersect: 5205016259.279373
[2026-03-14 05:29:17] 2026-03-14 04:28:13,140 | INFO     | chi2: 0.8297260321868603
[2026-03-14 05:29:17] 2026-03-14 04:28:13,140 | INFO     | current chi2=0.8297260321868603 (change=28.547142198822765 %)
[2026-03-14 05:29:17] 2026-03-14 04:28:13,141 | INFO     | sum of square deviations: 4844974562.5
[2026-03-14 05:29:17] 2026-03-14 04:28:13,143 | INFO     | sum of deviations: -11183003547.0
[2026-03-14 05:29:17] 2026-03-14 04:28:13,143 | INFO     | mean x: 1773454870.5
[2026-03-14 05:29:17] 2026-03-14 04:28:13,144 | INFO     | mean y: 2484879.936
[2026-03-14 05:29:17] 2026-03-14 04:28:13,144 | INFO     | intersect: 4095912379.173964
[2026-03-14 05:29:17] 2026-03-14 04:28:13,144 | INFO     | chi2: 0.8071792503406882
[2026-03-14 05:29:17] 2026-03-14 04:28:13,144 | INFO     | current chi2=0.8071792503406882 (change=2.7173766968292967 %)
[2026-03-14 05:29:17] 2026-03-14 04:28:13,144 | INFO     | left removable region: 30
[2026-03-14 05:29:17] 2026-03-14 04:28:13,145 | INFO     | sum of square deviations: 3723716330.0
[2026-03-14 05:29:17] 2026-03-14 04:28:13,147 | INFO     | sum of deviations: 4532241196.0
[2026-03-14 05:29:17] 2026-03-14 04:28:13,147 | INFO     | mean x: 1773455145.0
[2026-03-14 05:29:17] 2026-03-14 04:28:13,147 | INFO     | mean y: 2493967.1834061136
[2026-03-14 05:29:17] 2026-03-14 04:28:13,147 | INFO     | intersect: -2156028797.472825
[2026-03-14 05:29:17] 2026-03-14 04:28:13,148 | INFO     | chi2: 0.000490648285548568
[2026-03-14 05:29:17] 2026-03-14 04:28:13,148 | INFO     | current memory leak: 1.22 B/s (using 229 data points, chi2=0.00)
[2026-03-14 05:29:17] 2026-03-14 04:28:13,148 | INFO     | could have reported an average CPU frequency of 2249 MHz (13 samples)
[2026-03-14 05:29:17] 2026-03-14 04:28:13,148 | INFO     | ..............................
[2026-03-14 05:29:17] 2026-03-14 04:28:13,149 | INFO     | . Timing measurements:
[2026-03-14 05:29:17] 2026-03-14 04:28:13,149 | INFO     | . get job = 0 s
[2026-03-14 05:29:17] 2026-03-14 04:28:13,149 | INFO     | . initial setup = 102 s
[2026-03-14 05:29:17] 2026-03-14 04:28:13,149 | INFO     | . payload setup = 142 s
[2026-03-14 05:29:17] 2026-03-14 04:28:13,149 | INFO     | . stage-in = 0 s
[2026-03-14 05:29:17] 2026-03-14 04:28:13,149 | INFO     | . payload execution = 16248 s
[2026-03-14 05:29:17] 2026-03-14 04:28:13,149 | INFO     | . stage-out = 3 s
[2026-03-14 05:29:17] 2026-03-14 04:28:13,149 | INFO     | . log creation = 1 s
[2026-03-14 05:29:17] 2026-03-14 04:28:13,149 | INFO     | ..............................
[2026-03-14 05:29:17] 2026-03-14 04:28:13,260 | INFO     | 
[2026-03-14 05:29:17] 2026-03-14 04:28:13,260 | INFO     | job summary report
[2026-03-14 05:29:17] 2026-03-14 04:28:13,260 | INFO     | --------------------------------------------------
[2026-03-14 05:29:17] 2026-03-14 04:28:13,260 | INFO     | PanDA job id: 7053290573
[2026-03-14 05:29:17] 2026-03-14 04:28:13,260 | INFO     | task id: 48967085
[2026-03-14 05:29:17] 2026-03-14 04:28:13,261 | INFO     | errors: (none)
[2026-03-14 05:29:17] 2026-03-14 04:28:13,261 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 05:29:17] 2026-03-14 04:28:13,261 | INFO     | pilot state: finished 
[2026-03-14 05:29:17] 2026-03-14 04:28:13,261 | INFO     | transexitcode: 0
[2026-03-14 05:29:17] 2026-03-14 04:28:13,261 | INFO     | exeerrorcode: 0
[2026-03-14 05:29:17] 2026-03-14 04:28:13,261 | INFO     | exeerrordiag: 
[2026-03-14 05:29:17] 2026-03-14 04:28:13,261 | INFO     | exitcode: 0
[2026-03-14 05:29:17] 2026-03-14 04:28:13,261 | INFO     | exitmsg: OK
[2026-03-14 05:29:17] 2026-03-14 04:28:13,261 | INFO     | cpuconsumptiontime: 63193 s
[2026-03-14 05:29:17] 2026-03-14 04:28:13,261 | INFO     | nevents: 400
[2026-03-14 05:29:17] 2026-03-14 04:28:13,262 | INFO     | neventsw: 0
[2026-03-14 05:29:17] 2026-03-14 04:28:13,262 | INFO     | pid: 21173
[2026-03-14 05:29:17] 2026-03-14 04:28:13,262 | INFO     | pgrp: 21173
[2026-03-14 05:29:17] 2026-03-14 04:28:13,262 | INFO     | corecount: 8
[2026-03-14 05:29:17] 2026-03-14 04:28:13,262 | INFO     | event service: False
[2026-03-14 05:29:17] 2026-03-14 04:28:13,262 | INFO     | sizes: {0: 2279152, 1: 2279837, 2: 2280298, 13: 2280298, 16394: 2311828, 16395: 2311827, 16400: 2321009, 16402: 2321259}
[2026-03-14 05:29:17] 2026-03-14 04:28:13,262 | INFO     | --------------------------------------------------
[2026-03-14 05:29:17] 2026-03-14 04:28:13,262 | INFO     | 
[2026-03-14 05:29:17] 2026-03-14 04:28:13,262 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2026-03-14 05:29:17] 2026-03-14 04:28:13,514 | INFO     | time since job start (16415s) is within the limit (345600.0s)
[2026-03-14 05:29:17] 2026-03-14 04:28:13,731 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 05:29:17] 2026-03-14 04:28:13,732 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 05:29:17] 2026-03-14 04:28:13,732 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 05:29:17] 2026-03-14 04:28:13,732 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 05:29:17] 2026-03-14 04:28:13,732 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 05:29:17] 2026-03-14 04:28:13,732 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 05:29:17] 2026-03-14 04:28:13,732 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 05:29:17] 2026-03-14 04:28:13,732 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 05:29:17] 2026-03-14 04:28:13,732 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 05:29:17] 2026-03-14 04:28:13,732 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 05:29:17] 2026-03-14 04:28:13,733 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 05:29:17] 2026-03-14 04:28:13,733 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 05:29:17] 2026-03-14 04:28:13,733 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 05:29:17] 2026-03-14 04:28:13,733 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 05:29:17] 2026-03-14 04:28:13,733 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 05:29:17] 2026-03-14 04:28:13,733 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 05:29:17] 2026-03-14 04:28:13,733 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 05:29:17] 2026-03-14 04:28:13,733 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 05:29:17] 2026-03-14 04:28:13,733 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 05:29:17] 2026-03-14 04:28:13,734 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 05:29:17] 2026-03-14 04:28:13,734 | INFO     | job 7053290573 has completed (purged errors)
[2026-03-14 05:29:17] 2026-03-14 04:28:13,734 | INFO     | overall cleanup function is called
[2026-03-14 05:29:17] 2026-03-14 04:28:14,745 | INFO     | --- collectZombieJob: --- 10, [21173]
[2026-03-14 05:29:17] 2026-03-14 04:28:14,745 | INFO     | zombie collector waiting for pid 21173
[2026-03-14 05:29:17] 2026-03-14 04:28:14,745 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 05:29:17] 2026-03-14 04:28:14,745 | INFO     | collected zombie processes
[2026-03-14 05:29:17] 2026-03-14 04:28:14,745 | INFO     | will attempt to kill all subprocesses of pid=21173
[2026-03-14 05:29:17] 2026-03-14 04:28:14,889 | INFO     | process IDs to be killed: [21173] (in reverse order)
[2026-03-14 05:29:17] 2026-03-14 04:28:15,790 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 05:29:17] 2026-03-14 04:28:15,791 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 05:29:17] 2026-03-14 04:28:15,794 | INFO     | did not find any defunct processes belonging to 21173
[2026-03-14 05:29:17] 2026-03-14 04:28:15,797 | INFO     | did not find any defunct processes belonging to 21173
[2026-03-14 05:29:17] 2026-03-14 04:28:15,797 | INFO     | ready for new job
[2026-03-14 05:29:17] 2026-03-14 04:28:15,797 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 05:29:17] 2026-03-14 04:28:15,799 | INFO     | **************************************
[2026-03-14 05:29:17] 2026-03-14 04:28:15,799 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 05:29:17] 2026-03-14 04:28:15,799 | INFO     | **************************************
[2026-03-14 05:29:17] 2026-03-14 04:28:15,799 | INFO     | 
[2026-03-14 05:29:17] 2026-03-14 04:28:15,800 | INFO     | pilot is running in a VM
[2026-03-14 05:29:17] 2026-03-14 04:28:15,800 | INFO     | architecture information:
[2026-03-14 05:29:17] 2026-03-14 04:28:15,800 | INFO     | executing command: cat /etc/os-release
[2026-03-14 05:29:17] 2026-03-14 04:28:15,820 | INFO     | cat /etc/os-release:
[2026-03-14 05:29:17] NAME="CentOS Linux"
[2026-03-14 05:29:17] VERSION="7 (Core)"
[2026-03-14 05:29:17] ID="centos"
[2026-03-14 05:29:17] ID_LIKE="rhel fedora"
[2026-03-14 05:29:17] VERSION_ID="7"
[2026-03-14 05:29:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 05:29:17] ANSI_COLOR="0;31"
[2026-03-14 05:29:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 05:29:17] HOME_URL="https://www.centos.org/"
[2026-03-14 05:29:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 05:29:17] 
[2026-03-14 05:29:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 05:29:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 05:29:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 05:29:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 05:29:17] 
[2026-03-14 05:29:17] 2026-03-14 04:28:15,820 | INFO     | **************************************
[2026-03-14 05:29:17] 2026-03-14 04:28:16,323 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2026-03-14 05:29:17] 2026-03-14 04:28:16,400 | INFO     | sufficient remaining disk space (495354642432 B)
[2026-03-14 05:29:17] 2026-03-14 04:28:16,401 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 05:29:17] 2026-03-14 04:28:16,401 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 05:29:17] 2026-03-14 04:28:16,401 | INFO     | update_server=False
[2026-03-14 05:29:17] 2026-03-14 04:28:16,401 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 05:29:17] 2026-03-14 04:28:16,484 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 05:29:17] 2026-03-14 04:28:16,494 | INFO     | all data control threads have been joined
[2026-03-14 05:29:17] 2026-03-14 04:28:16,716 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-14 05:29:17] 2026-03-14 04:28:16,716 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-14 05:29:17] 2026-03-14 04:28:16,716 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 05:29:17] 2026-03-14 04:28:16,716 | INFO     | will abort loop
[2026-03-14 05:29:17] 2026-03-14 04:28:17,407 | INFO     | [job] retrieve thread has finished
[2026-03-14 05:29:17] 2026-03-14 04:28:17,464 | INFO     | [job] validate thread has finished
[2026-03-14 05:29:17] 2026-03-14 04:28:17,500 | INFO     | [data] control thread has finished
[2026-03-14 05:29:17] 2026-03-14 04:28:17,665 | INFO     | all job control threads have been joined
[2026-03-14 05:29:17] 2026-03-14 04:28:17,722 | INFO     | [job] job monitor thread has finished
[2026-03-14 05:29:17] 2026-03-14 04:28:17,807 | INFO     | all payload control threads have been joined
[2026-03-14 05:29:17] 2026-03-14 04:28:17,947 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 05:29:17] 2026-03-14 04:28:18,007 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 05:29:17] 2026-03-14 04:28:18,048 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 05:29:17] 2026-03-14 04:28:18,228 | INFO     | [payload] validate_post thread has finished
[2026-03-14 05:29:17] 2026-03-14 04:28:18,270 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 05:29:17] 2026-03-14 04:28:18,291 | INFO     | [data] copytool_in thread has finished
[2026-03-14 05:29:17] 2026-03-14 04:28:18,492 | INFO     | [data] copytool_out thread has finished
[2026-03-14 05:29:17] 2026-03-14 04:28:18,671 | INFO     | [job] control thread has finished
[2026-03-14 05:29:17] 2026-03-14 04:28:18,813 | INFO     | [payload] control thread has finished
[2026-03-14 05:29:17] 2026-03-14 04:28:18,899 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 05:29:17] 2026-03-14 04:28:18,983 | INFO     | [payload] failed_post thread has finished
[2026-03-14 05:29:17] 2026-03-14 04:28:19,122 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 05:29:17] 2026-03-14 04:28:19,276 | INFO     | [job] queue monitor thread has finished
[2026-03-14 05:29:17] 2026-03-14 04:28:23,131 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 05:29:17] 2026-03-14 04:28:46,698 | INFO     | PID=16560 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-14 05:29:17] 2026-03-14 04:28:46,698 | INFO     | .. there are 9 such processes running
[2026-03-14 05:29:17] 2026-03-14 04:28:46,699 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 05:29:17] 2026-03-14 04:28:46,699 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 05:29:17] 2026-03-14 04:28:46,699 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 05:29:17] 2026-03-14 04:29:06,434 | INFO     | [monitor] cgroup control has ended
[2026-03-14 05:29:17] 2026-03-14 04:29:07,419 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140273650755392)>', '<ExcThread(monitor, started 140273229231872)>']
[2026-03-14 05:29:17] 2026-03-14 04:29:07,825 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 05:29:17] 2026-03-14 04:29:07,825 | INFO     | [monitor] control thread has ended
[2026-03-14 05:29:17] 2026-03-14 04:29:12,445 | INFO     | all workflow threads have been joined
[2026-03-14 05:29:17] 2026-03-14 04:29:12,445 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 05:29:17] 2026-03-14 04:29:12,445 | INFO     | traces error code: 0
[2026-03-14 05:29:17] 2026-03-14 04:29:12,446 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 05:29:17] 2026-03-14 04:29:12,828 [wrapper] ==== pilot stdout END ====
[2026-03-14 05:29:17] 2026-03-14 04:29:12,925 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 05:29:17] 2026-03-14 04:29:13,010 [wrapper] pilotpid: 16560
[2026-03-14 05:29:17] 2026-03-14 04:29:13,106 [wrapper] Pilot exit status: 0
[2026-03-14 05:29:17] 2026-03-14 04:29:13,572 [wrapper] pandaids: 7053290573
[2026-03-14 05:29:17] 2026-03-14 04:29:14,312 [wrapper] cleanup supervisor_pilot 29052 16561
[2026-03-14 05:29:17] 2026-03-14 04:29:14,433 [wrapper] Test setup, not cleaning
[2026-03-14 05:29:17] 2026-03-14 04:29:14,546 [wrapper] apfmon messages muted
[2026-03-14 05:29:17] 2026-03-14 04:29:14,646 [wrapper] ==== wrapper stdout END ====
[2026-03-14 05:29:17] 2026-03-14 04:29:14,750 [wrapper] ==== wrapper stderr END ====
[2026-03-14 05:29:17]  *** Error codes and diagnostics ***
[2026-03-14 05:29:17]     "exeErrorCode": 0,
[2026-03-14 05:29:17]     "exeErrorDiag": "",
[2026-03-14 05:29:17]     "pilotErrorCode": 0,
[2026-03-14 05:29:17]     "pilotErrorDiag": "",
[2026-03-14 05:29:17]  *** Listing of results directory ***
[2026-03-14 05:29:17] total 413956
[2026-03-14 05:29:17] -rw-r--r--. 1 boinc boinc      5111 Mar 13 11:33 queuedata.json
[2026-03-14 05:29:17] -rw-r--r--. 1 boinc boinc    585013 Mar 13 11:33 pilot3.tar.gz
[2026-03-14 05:29:17] -rwx------. 1 boinc boinc     36322 Mar 13 11:33 runpilot2-wrapper.sh
[2026-03-14 05:29:17] -rw-r--r--. 1 boinc boinc       100 Mar 14 00:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 05:29:17] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 00:49 run_atlas
[2026-03-14 05:29:17] -rw-r--r--. 1 boinc boinc       105 Mar 14 00:49 job.xml
[2026-03-14 05:29:17] -rw-r--r--. 2 boinc boinc 212775870 Mar 14 00:49 EVNT.48967083._000768.pool.root.1
[2026-03-14 05:29:17] -rw-r--r--. 1 boinc boinc      6391 Mar 14 00:49 init_data.xml
[2026-03-14 05:29:17] -rw-r--r--. 2 boinc boinc     15845 Mar 14 00:49 start_atlas.sh
[2026-03-14 05:29:17] drwxrwx--x. 2 boinc boinc        68 Mar 14 00:49 shared
[2026-03-14 05:29:17] -rw-r--r--. 2 boinc boinc    597519 Mar 14 00:49 input.tar.gz
[2026-03-14 05:29:17] -rw-r--r--. 1 boinc boinc         0 Mar 14 00:49 boinc_lockfile
[2026-03-14 05:29:17] -rw-r--r--. 1 boinc boinc      2563 Mar 14 00:49 pandaJob.out
[2026-03-14 05:29:17] -rw-------. 1 boinc boinc       415 Mar 14 00:54 workernode_map.json
[2026-03-14 05:29:17] -rw-------. 1 boinc boinc   1006713 Mar 14 00:54 agis_schedconf.cvmfs.json
[2026-03-14 05:29:17] drwx------. 5 boinc boinc      4096 Mar 14 00:54 pilot3
[2026-03-14 05:29:17] -rw-------. 1 boinc boinc 201620918 Mar 14 05:26 HITS.48967085._019144.pool.root.1
[2026-03-14 05:29:17] -rw-r--r--. 1 boinc boinc       531 Mar 14 05:27 boinc_task_state.xml
[2026-03-14 05:29:17] -rw-------. 1 boinc boinc      1016 Mar 14 05:28 memory_monitor_summary.json
[2026-03-14 05:29:17] -rw-------. 1 boinc boinc   1511579 Mar 14 05:28 agis_ddmendpoints.agis.ALL.json
[2026-03-14 05:29:17] -rw-------. 1 boinc boinc    489122 Mar 14 05:28 log.48967085._019144.job.log.tgz.1
[2026-03-14 05:29:17] -rw-------. 1 boinc boinc      6317 Mar 14 05:28 heartbeat.json
[2026-03-14 05:29:17] -rw-------. 1 boinc boinc        95 Mar 14 05:28 pilot_heartbeat.json
[2026-03-14 05:29:17] -rw-r--r--. 1 boinc boinc      8192 Mar 14 05:28 boinc_mmap_file
[2026-03-14 05:29:17] -rw-r--r--. 1 boinc boinc        28 Mar 14 05:28 wrapper_checkpoint.txt
[2026-03-14 05:29:17] -rw-------. 1 boinc boinc      5066 Mar 14 05:29 pilotlog.txt
[2026-03-14 05:29:17] -rw-------. 1 boinc boinc   2297516 Mar 14 05:29 log.48967085._019144.job.log.1
[2026-03-14 05:29:17] -rw-------. 1 boinc boinc       357 Mar 14 05:29 output.list
[2026-03-14 05:29:17] -rw-r--r--. 1 boinc boinc       620 Mar 14 05:29 runtime_log
[2026-03-14 05:29:17] -rw-------. 1 boinc boinc   2805760 Mar 14 05:29 result.tar.gz
[2026-03-14 05:29:17] -rw-r--r--. 1 boinc boinc      8816 Mar 14 05:29 runtime_log.err
[2026-03-14 05:29:17] -rw-------. 1 boinc boinc       655 Mar 14 05:29 JiwNDmh0EL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmhcmLDmn9XxMo.diag
[2026-03-14 05:29:17] -rw-r--r--. 1 boinc boinc     20725 Mar 14 05:29 stderr.txt
[2026-03-14 05:29:17] HITS file was successfully produced:
[2026-03-14 05:29:17] -rw-------. 1 boinc boinc 201620918 Mar 14 05:26 shared/HITS.pool.root.1
[2026-03-14 05:29:17]  *** Contents of shared directory: ***
[2026-03-14 05:29:17] total 408028
[2026-03-14 05:29:17] -rw-r--r--. 2 boinc boinc 212775870 Mar 14 00:49 ATLAS.root_0
[2026-03-14 05:29:17] -rw-r--r--. 2 boinc boinc     15845 Mar 14 00:49 start_atlas.sh
[2026-03-14 05:29:17] -rw-r--r--. 2 boinc boinc    597519 Mar 14 00:49 input.tar.gz
[2026-03-14 05:29:17] -rw-------. 1 boinc boinc 201620918 Mar 14 05:26 HITS.pool.root.1
[2026-03-14 05:29:17] -rw-------. 1 boinc boinc   2805760 Mar 14 05:29 result.tar.gz
05:29:19 (12234): run_atlas exited; CPU time 63441.268077
05:29:19 (12234): called boinc_finish(0)

</stderr_txt>
]]>

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