Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:47:50 (5273): wrapper (7.7.26015): starting
23:47:50 (5273): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 23:47:50] Arguments: --nthreads 8
[2026-03-13 23:47:50] Threads: 8
[2026-03-13 23:47:50] Checking for CVMFS
[2026-03-13 23:47:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 23:47:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 23:47:54] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 23:47:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 23:47:55] 2.11.2.0 28971 126755 106956 157256 3 53 20759759 25165825 4216 130560 153 44320096 99.845 30443809 1081 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-13 23:47:55] CVMFS is ok
[2026-03-13 23:47:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 23:47:55] Checking for apptainer binary...
[2026-03-13 23:47:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 23:47:55] Running /usr/bin/apptainer --version
[2026-03-13 23:47:55] apptainer version 1.3.2-1.el7
[2026-03-13 23:47:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 23:48:06] cg-vwn489.simple-grid.lan
[2026-03-13 23:48:06] apptainer works
[2026-03-13 23:48:06] Set ATHENA_PROC_NUMBER=8
[2026-03-13 23:48:06] Set ATHENA_CORE_NUMBER=8
[2026-03-13 23:48:06] Starting ATLAS job with PandaID=7053277285
[2026-03-13 23:48:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 08:36:43]  *** The last 200 lines of the pilot log: ***
[2026-03-14 08:36:44] 2026-03-14 07:35:46,865 | INFO     | log transfer has been attempted: DONE
[2026-03-14 08:36:44] 2026-03-14 07:35:46,865 | INFO     | job 7053277285 has finished - writing final server update
[2026-03-14 08:36:44] 2026-03-14 07:35:46,866 | INFO     | total number of processed events: 400 (read)
[2026-03-14 08:36:44] 2026-03-14 07:35:46,868 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-7053277285/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 08:36:44] 2026-03-14 07:35:46,869 | INFO     | extracted standard info from prmon json
[2026-03-14 08:36:44] 2026-03-14 07:35:46,869 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 08:36:44] 2026-03-14 07:35:46,869 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 08:36:44] 2026-03-14 07:35:46,869 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 08:36:44] 2026-03-14 07:35:46,869 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 08:36:44] 2026-03-14 07:35:46,879 | INFO     | fitting pss+swap vs Time
[2026-03-14 08:36:44] 2026-03-14 07:35:46,880 | INFO     | sum of square deviations: 40891222510.0
[2026-03-14 08:36:44] 2026-03-14 07:35:46,887 | INFO     | sum of deviations: 305244640683.00006
[2026-03-14 08:36:44] 2026-03-14 07:35:46,888 | INFO     | mean x: 1773458192.0
[2026-03-14 08:36:44] 2026-03-14 07:35:46,888 | INFO     | mean y: 2483666.3497053045
[2026-03-14 08:36:44] 2026-03-14 07:35:46,888 | INFO     | intersect: -13236020231.423904
[2026-03-14 08:36:44] 2026-03-14 07:35:46,889 | INFO     | chi2: 6.5141042952489965
[2026-03-14 08:36:44] 2026-03-14 07:35:46,890 | INFO     | sum of square deviations: 39697972230.0
[2026-03-14 08:36:44] 2026-03-14 07:35:46,905 | INFO     | sum of deviations: 336114950424.5002
[2026-03-14 08:36:44] 2026-03-14 07:35:46,905 | INFO     | mean x: 1773458039.5
[2026-03-14 08:36:44] 2026-03-14 07:35:46,905 | INFO     | mean y: 2487576.910714286
[2026-03-14 08:36:44] 2026-03-14 07:35:46,905 | INFO     | intersect: -15013034061.648146
[2026-03-14 08:36:44] 2026-03-14 07:35:46,906 | INFO     | chi2: 5.762422923542613
[2026-03-14 08:36:44] 2026-03-14 07:35:46,906 | INFO     | current chi2=5.762422923542613 (change=11.539289787770448 %)
[2026-03-14 08:36:44] 2026-03-14 07:35:46,906 | INFO     | right removable region: 503
[2026-03-14 08:36:44] 2026-03-14 07:35:46,907 | INFO     | sum of square deviations: 39697972230.0
[2026-03-14 08:36:44] 2026-03-14 07:35:46,915 | INFO     | sum of deviations: 128289014051.00003
[2026-03-14 08:36:44] 2026-03-14 07:35:46,915 | INFO     | mean x: 1773458344.5
[2026-03-14 08:36:44] 2026-03-14 07:35:46,915 | INFO     | mean y: 2506271.8492063493
[2026-03-14 08:36:44] 2026-03-14 07:35:46,916 | INFO     | intersect: -5728648487.347514
[2026-03-14 08:36:44] 2026-03-14 07:35:46,916 | INFO     | chi2: 2.0910579378300023
[2026-03-14 08:36:44] 2026-03-14 07:35:46,917 | INFO     | current chi2=2.0910579378300023 (change=67.89953241376413 %)
[2026-03-14 08:36:44] 2026-03-14 07:35:46,917 | INFO     | sum of square deviations: 38528164250.0
[2026-03-14 08:36:44] 2026-03-14 07:35:46,924 | INFO     | sum of deviations: 43300716958.99997
[2026-03-14 08:36:44] 2026-03-14 07:35:46,925 | INFO     | mean x: 1773458497.0
[2026-03-14 08:36:44] 2026-03-14 07:35:46,925 | INFO     | mean y: 2517317.635270541
[2026-03-14 08:36:44] 2026-03-14 07:35:46,925 | INFO     | intersect: -1990622659.6251435
[2026-03-14 08:36:44] 2026-03-14 07:35:46,926 | INFO     | chi2: 0.8400997420568415
[2026-03-14 08:36:44] 2026-03-14 07:35:46,926 | INFO     | current chi2=0.8400997420568415 (change=59.82417670699952 %)
[2026-03-14 08:36:44] 2026-03-14 07:35:46,927 | INFO     | sum of square deviations: 37381566007.5
[2026-03-14 08:36:44] 2026-03-14 07:35:46,937 | INFO     | sum of deviations: 26774453731.0
[2026-03-14 08:36:44] 2026-03-14 07:35:46,938 | INFO     | mean x: 1773458649.5
[2026-03-14 08:36:44] 2026-03-14 07:35:46,938 | INFO     | mean y: 2519508.809716599
[2026-03-14 08:36:44] 2026-03-14 07:35:46,938 | INFO     | intersect: -1267715840.4892595
[2026-03-14 08:36:44] 2026-03-14 07:35:46,939 | INFO     | chi2: 0.7943299798379149
[2026-03-14 08:36:44] 2026-03-14 07:35:46,939 | INFO     | current chi2=0.7943299798379149 (change=5.448134302108832 %)
[2026-03-14 08:36:44] 2026-03-14 07:35:46,939 | INFO     | left removable region: 30
[2026-03-14 08:36:44] 2026-03-14 07:35:46,940 | INFO     | sum of square deviations: 32814055252.0
[2026-03-14 08:36:44] 2026-03-14 07:35:46,947 | INFO     | sum of deviations: 43025667349.00001
[2026-03-14 08:36:44] 2026-03-14 07:35:46,947 | INFO     | mean x: 1773458924.0
[2026-03-14 08:36:44] 2026-03-14 07:35:46,947 | INFO     | mean y: 2526187.2177589852
[2026-03-14 08:36:44] 2026-03-14 07:35:46,948 | INFO     | intersect: -2322826565.8982635
[2026-03-14 08:36:44] 2026-03-14 07:35:46,948 | INFO     | chi2: 0.004041585095606975
[2026-03-14 08:36:44] 2026-03-14 07:35:46,949 | INFO     | current memory leak: 1.31 B/s (using 473 data points, chi2=0.00)
[2026-03-14 08:36:44] 2026-03-14 07:35:46,949 | INFO     | could have reported an average CPU frequency of 2249 MHz (21 samples)
[2026-03-14 08:36:44] 2026-03-14 07:35:46,949 | INFO     | ..............................
[2026-03-14 08:36:44] 2026-03-14 07:35:46,950 | INFO     | . Timing measurements:
[2026-03-14 08:36:44] 2026-03-14 07:35:46,950 | INFO     | . get job = 0 s
[2026-03-14 08:36:44] 2026-03-14 07:35:46,950 | INFO     | . initial setup = 109 s
[2026-03-14 08:36:44] 2026-03-14 07:35:46,950 | INFO     | . payload setup = 138 s
[2026-03-14 08:36:44] 2026-03-14 07:35:46,950 | INFO     | . stage-in = 0 s
[2026-03-14 08:36:44] 2026-03-14 07:35:46,950 | INFO     | . payload execution = 31163 s
[2026-03-14 08:36:44] 2026-03-14 07:35:46,950 | INFO     | . stage-out = 3 s
[2026-03-14 08:36:44] 2026-03-14 07:35:46,950 | INFO     | . log creation = 1 s
[2026-03-14 08:36:44] 2026-03-14 07:35:46,950 | INFO     | ..............................
[2026-03-14 08:36:44] 2026-03-14 07:35:47,106 | INFO     | 
[2026-03-14 08:36:44] 2026-03-14 07:35:47,106 | INFO     | job summary report
[2026-03-14 08:36:44] 2026-03-14 07:35:47,106 | INFO     | --------------------------------------------------
[2026-03-14 08:36:44] 2026-03-14 07:35:47,107 | INFO     | PanDA job id: 7053277285
[2026-03-14 08:36:44] 2026-03-14 07:35:47,107 | INFO     | task id: 48967067
[2026-03-14 08:36:44] 2026-03-14 07:35:47,107 | INFO     | errors: (none)
[2026-03-14 08:36:44] 2026-03-14 07:35:47,107 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 08:36:44] 2026-03-14 07:35:47,107 | INFO     | pilot state: finished 
[2026-03-14 08:36:44] 2026-03-14 07:35:47,107 | INFO     | transexitcode: 0
[2026-03-14 08:36:44] 2026-03-14 07:35:47,107 | INFO     | exeerrorcode: 0
[2026-03-14 08:36:44] 2026-03-14 07:35:47,107 | INFO     | exeerrordiag: 
[2026-03-14 08:36:44] 2026-03-14 07:35:47,107 | INFO     | exitcode: 0
[2026-03-14 08:36:44] 2026-03-14 07:35:47,107 | INFO     | exitmsg: OK
[2026-03-14 08:36:44] 2026-03-14 07:35:47,108 | INFO     | cpuconsumptiontime: 123268 s
[2026-03-14 08:36:44] 2026-03-14 07:35:47,108 | INFO     | nevents: 400
[2026-03-14 08:36:44] 2026-03-14 07:35:47,108 | INFO     | neventsw: 0
[2026-03-14 08:36:44] 2026-03-14 07:35:47,108 | INFO     | pid: 13921
[2026-03-14 08:36:44] 2026-03-14 07:35:47,108 | INFO     | pgrp: 13921
[2026-03-14 08:36:44] 2026-03-14 07:35:47,108 | INFO     | corecount: 8
[2026-03-14 08:36:44] 2026-03-14 07:35:47,108 | INFO     | event service: False
[2026-03-14 08:36:44] 2026-03-14 07:35:47,108 | INFO     | sizes: {0: 2279742, 1: 2280199, 2: 2280259, 12: 2280287, 31306: 2318577, 31312: 2327577, 31314: 2327761, 31315: 2327955}
[2026-03-14 08:36:44] 2026-03-14 07:35:47,108 | INFO     | --------------------------------------------------
[2026-03-14 08:36:44] 2026-03-14 07:35:47,108 | INFO     | 
[2026-03-14 08:36:44] 2026-03-14 07:35:47,109 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-03-14 08:36:44] 2026-03-14 07:35:47,638 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 08:36:44] 2026-03-14 07:35:47,638 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 08:36:44] 2026-03-14 07:35:47,638 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 08:36:44] 2026-03-14 07:35:47,638 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 08:36:44] 2026-03-14 07:35:47,638 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 08:36:44] 2026-03-14 07:35:47,639 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 08:36:44] 2026-03-14 07:35:47,639 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 08:36:44] 2026-03-14 07:35:47,639 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 08:36:44] 2026-03-14 07:35:47,639 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 08:36:44] 2026-03-14 07:35:47,639 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 08:36:44] 2026-03-14 07:35:47,639 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 08:36:44] 2026-03-14 07:35:47,639 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 08:36:44] 2026-03-14 07:35:47,639 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 08:36:44] 2026-03-14 07:35:47,640 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 08:36:44] 2026-03-14 07:35:47,640 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 08:36:44] 2026-03-14 07:35:47,640 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 08:36:44] 2026-03-14 07:35:47,640 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 08:36:44] 2026-03-14 07:35:47,640 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 08:36:44] 2026-03-14 07:35:47,640 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 08:36:44] 2026-03-14 07:35:47,640 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 08:36:44] 2026-03-14 07:35:47,640 | INFO     | job 7053277285 has completed (purged errors)
[2026-03-14 08:36:44] 2026-03-14 07:35:47,641 | INFO     | overall cleanup function is called
[2026-03-14 08:36:44] 2026-03-14 07:35:48,649 | INFO     | --- collectZombieJob: --- 10, [13921]
[2026-03-14 08:36:44] 2026-03-14 07:35:48,649 | INFO     | zombie collector waiting for pid 13921
[2026-03-14 08:36:44] 2026-03-14 07:35:48,650 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 08:36:44] 2026-03-14 07:35:48,650 | INFO     | collected zombie processes
[2026-03-14 08:36:44] 2026-03-14 07:35:48,650 | INFO     | will attempt to kill all subprocesses of pid=13921
[2026-03-14 08:36:44] 2026-03-14 07:35:48,762 | INFO     | process IDs to be killed: [13921] (in reverse order)
[2026-03-14 08:36:44] 2026-03-14 07:35:49,685 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 08:36:44] 2026-03-14 07:35:49,685 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 08:36:44] 2026-03-14 07:35:49,688 | INFO     | did not find any defunct processes belonging to 13921
[2026-03-14 08:36:44] 2026-03-14 07:35:49,690 | INFO     | did not find any defunct processes belonging to 13921
[2026-03-14 08:36:44] 2026-03-14 07:35:49,691 | INFO     | ready for new job
[2026-03-14 08:36:44] 2026-03-14 07:35:49,691 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 08:36:44] 2026-03-14 07:35:49,693 | INFO     | **************************************
[2026-03-14 08:36:44] 2026-03-14 07:35:49,693 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 08:36:44] 2026-03-14 07:35:49,694 | INFO     | **************************************
[2026-03-14 08:36:44] 2026-03-14 07:35:49,694 | INFO     | 
[2026-03-14 08:36:44] 2026-03-14 07:35:49,694 | INFO     | pilot is running in a VM
[2026-03-14 08:36:44] 2026-03-14 07:35:49,694 | INFO     | architecture information:
[2026-03-14 08:36:44] 2026-03-14 07:35:49,708 | INFO     | executing command: cat /etc/os-release
[2026-03-14 08:36:44] 2026-03-14 07:35:50,040 | INFO     | cat /etc/os-release:
[2026-03-14 08:36:44] NAME="CentOS Linux"
[2026-03-14 08:36:44] VERSION="7 (Core)"
[2026-03-14 08:36:44] ID="centos"
[2026-03-14 08:36:44] ID_LIKE="rhel fedora"
[2026-03-14 08:36:44] VERSION_ID="7"
[2026-03-14 08:36:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 08:36:44] ANSI_COLOR="0;31"
[2026-03-14 08:36:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 08:36:44] HOME_URL="https://www.centos.org/"
[2026-03-14 08:36:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 08:36:44] 
[2026-03-14 08:36:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 08:36:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 08:36:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 08:36:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 08:36:44] 
[2026-03-14 08:36:44] 2026-03-14 07:35:50,040 | INFO     | **************************************
[2026-03-14 08:36:44] 2026-03-14 07:35:50,543 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-03-14 08:36:44] 2026-03-14 07:35:50,840 | INFO     | sufficient remaining disk space (496628662272 B)
[2026-03-14 08:36:44] 2026-03-14 07:35:50,840 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 08:36:44] 2026-03-14 07:35:50,840 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 08:36:44] 2026-03-14 07:35:50,841 | INFO     | update_server=False
[2026-03-14 08:36:44] 2026-03-14 07:35:50,841 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 08:36:44] 2026-03-14 07:35:50,842 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 08:36:44] 2026-03-14 07:35:50,842 | INFO     | aborting loop
[2026-03-14 08:36:44] 2026-03-14 07:35:51,431 | INFO     | all payload control threads have been joined
[2026-03-14 08:36:44] 2026-03-14 07:35:51,742 | INFO     | all job control threads have been joined
[2026-03-14 08:36:44] 2026-03-14 07:35:51,843 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 08:36:44] 2026-03-14 07:35:51,846 | INFO     | [job] retrieve thread has finished
[2026-03-14 08:36:44] 2026-03-14 07:35:51,848 | INFO     | [job] job monitor thread has finished
[2026-03-14 08:36:44] 2026-03-14 07:35:51,866 | INFO     | [payload] failed_post thread has finished
[2026-03-14 08:36:44] 2026-03-14 07:35:51,919 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 08:36:44] 2026-03-14 07:35:51,948 | INFO     | all data control threads have been joined
[2026-03-14 08:36:44] 2026-03-14 07:35:51,951 | INFO     | [data] copytool_in thread has finished
[2026-03-14 08:36:44] 2026-03-14 07:35:52,001 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 08:36:44] 2026-03-14 07:35:52,123 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 08:36:44] 2026-03-14 07:35:52,337 | INFO     | [payload] validate_post thread has finished
[2026-03-14 08:36:44] 2026-03-14 07:35:52,437 | INFO     | [payload] control thread has finished
[2026-03-14 08:36:44] 2026-03-14 07:35:52,748 | INFO     | [job] control thread has finished
[2026-03-14 08:36:44] 2026-03-14 07:35:52,749 | INFO     | [job] validate thread has finished
[2026-03-14 08:36:44] 2026-03-14 07:35:52,876 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 08:36:44] 2026-03-14 07:35:52,884 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 08:36:44] 2026-03-14 07:35:52,954 | INFO     | [data] control thread has finished
[2026-03-14 08:36:44] 2026-03-14 07:35:53,069 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 08:36:44] 2026-03-14 07:35:53,129 | INFO     | [job] queue monitor thread has finished
[2026-03-14 08:36:44] 2026-03-14 07:35:53,850 | INFO     | [data] copytool_out thread has finished
[2026-03-14 08:36:44] 2026-03-14 07:35:56,010 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 08:36:44] 2026-03-14 07:36:19,326 | INFO     | PID=9392 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-14 08:36:44] 2026-03-14 07:36:19,326 | INFO     | .. there are 9 such processes running
[2026-03-14 08:36:44] 2026-03-14 07:36:19,326 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 08:36:44] 2026-03-14 07:36:19,327 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 08:36:44] 2026-03-14 07:36:19,327 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 08:36:44] 2026-03-14 07:36:33,587 | INFO     | [monitor] cgroup control has ended
[2026-03-14 08:36:44] 2026-03-14 07:36:34,949 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140077533853504)>', '<ExcThread(monitor, started 140077103560448)>']
[2026-03-14 08:36:44] 2026-03-14 07:36:35,420 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 08:36:44] 2026-03-14 07:36:35,420 | INFO     | [monitor] control thread has ended
[2026-03-14 08:36:44] 2026-03-14 07:36:39,975 | INFO     | all workflow threads have been joined
[2026-03-14 08:36:44] 2026-03-14 07:36:39,975 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 08:36:44] 2026-03-14 07:36:39,976 | INFO     | traces error code: 0
[2026-03-14 08:36:44] 2026-03-14 07:36:39,976 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 08:36:44] 2026-03-14 07:36:40,362 [wrapper] ==== pilot stdout END ====
[2026-03-14 08:36:44] 2026-03-14 07:36:40,430 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 08:36:44] 2026-03-14 07:36:40,482 [wrapper] pilotpid: 9392
[2026-03-14 08:36:44] 2026-03-14 07:36:40,566 [wrapper] Pilot exit status: 0
[2026-03-14 08:36:44] 2026-03-14 07:36:41,009 [wrapper] pandaids: 7053277285
[2026-03-14 08:36:44] 2026-03-14 07:36:41,389 [wrapper] cleanup supervisor_pilot 26703 9393
[2026-03-14 08:36:44] 2026-03-14 07:36:41,497 [wrapper] Test setup, not cleaning
[2026-03-14 08:36:44] 2026-03-14 07:36:41,590 [wrapper] apfmon messages muted
[2026-03-14 08:36:44] 2026-03-14 07:36:41,674 [wrapper] ==== wrapper stdout END ====
[2026-03-14 08:36:44] 2026-03-14 07:36:41,771 [wrapper] ==== wrapper stderr END ====
[2026-03-14 08:36:44]  *** Error codes and diagnostics ***
[2026-03-14 08:36:44]     "exeErrorCode": 0,
[2026-03-14 08:36:44]     "exeErrorDiag": "",
[2026-03-14 08:36:44]     "pilotErrorCode": 0,
[2026-03-14 08:36:44]     "pilotErrorDiag": "",
[2026-03-14 08:36:44]  *** Listing of results directory ***
[2026-03-14 08:36:44] total 518948
[2026-03-14 08:36:44] -rw-r--r--. 1 boinc boinc      5111 Mar 13 11:33 queuedata.json
[2026-03-14 08:36:44] -rw-r--r--. 1 boinc boinc    585013 Mar 13 11:33 pilot3.tar.gz
[2026-03-14 08:36:44] -rwx------. 1 boinc boinc     36322 Mar 13 11:33 runpilot2-wrapper.sh
[2026-03-14 08:36:44] -rw-r--r--. 1 boinc boinc       100 Mar 13 23:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 08:36:44] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 23:47 run_atlas
[2026-03-14 08:36:44] -rw-r--r--. 1 boinc boinc       105 Mar 13 23:47 job.xml
[2026-03-14 08:36:44] -rw-r--r--. 2 boinc boinc 235221400 Mar 13 23:47 EVNT.48967065._000073.pool.root.1
[2026-03-14 08:36:44] -rw-r--r--. 1 boinc boinc      6391 Mar 13 23:47 init_data.xml
[2026-03-14 08:36:44] -rw-r--r--. 2 boinc boinc     15845 Mar 13 23:47 start_atlas.sh
[2026-03-14 08:36:44] drwxrwx--x. 2 boinc boinc        68 Mar 13 23:47 shared
[2026-03-14 08:36:44] -rw-r--r--. 2 boinc boinc    597546 Mar 13 23:47 input.tar.gz
[2026-03-14 08:36:44] -rw-r--r--. 1 boinc boinc         0 Mar 13 23:47 boinc_lockfile
[2026-03-14 08:36:44] -rw-r--r--. 1 boinc boinc      2614 Mar 13 23:48 pandaJob.out
[2026-03-14 08:36:44] -rw-------. 1 boinc boinc       415 Mar 13 23:53 workernode_map.json
[2026-03-14 08:36:44] -rw-------. 1 boinc boinc   1006717 Mar 13 23:53 agis_schedconf.cvmfs.json
[2026-03-14 08:36:44] drwx------. 5 boinc boinc      4096 Mar 13 23:53 pilot3
[2026-03-14 08:36:44] -rw-------. 1 boinc boinc 282180828 Mar 14 08:34 HITS.48967067._002601.pool.root.1
[2026-03-14 08:36:44] -rw-r--r--. 1 boinc boinc       532 Mar 14 08:34 boinc_task_state.xml
[2026-03-14 08:36:44] -rw-------. 1 boinc boinc        95 Mar 14 08:35 pilot_heartbeat.json
[2026-03-14 08:36:44] -rw-------. 1 boinc boinc      1014 Mar 14 08:35 memory_monitor_summary.json
[2026-03-14 08:36:44] -rw-------. 1 boinc boinc   1511579 Mar 14 08:35 agis_ddmendpoints.agis.ALL.json
[2026-03-14 08:36:44] -rw-------. 1 boinc boinc    708381 Mar 14 08:35 log.48967067._002601.job.log.tgz.1
[2026-03-14 08:36:44] -rw-------. 1 boinc boinc      6318 Mar 14 08:35 heartbeat.json
[2026-03-14 08:36:44] -rw-r--r--. 1 boinc boinc        29 Mar 14 08:36 wrapper_checkpoint.txt
[2026-03-14 08:36:44] -rw-r--r--. 1 boinc boinc      8192 Mar 14 08:36 boinc_mmap_file
[2026-03-14 08:36:44] -rw-------. 1 boinc boinc      4880 Mar 14 08:36 pilotlog.txt
[2026-03-14 08:36:44] -rw-------. 1 boinc boinc   4330631 Mar 14 08:36 log.48967067._002601.job.log.1
[2026-03-14 08:36:44] -rw-------. 1 boinc boinc       357 Mar 14 08:36 output.list
[2026-03-14 08:36:44] -rw-r--r--. 1 boinc boinc       620 Mar 14 08:36 runtime_log
[2026-03-14 08:36:44] -rw-------. 1 boinc boinc   5058560 Mar 14 08:36 result.tar.gz
[2026-03-14 08:36:44] -rw-r--r--. 1 boinc boinc      8832 Mar 14 08:36 runtime_log.err
[2026-03-14 08:36:44] -rw-------. 1 boinc boinc       658 Mar 14 08:36 QGNLDmb0EL9n9Rq4apOajLDm4fhM0noT9bVooX4SDm5bmLDmL7SJUn.diag
[2026-03-14 08:36:44] -rw-r--r--. 1 boinc boinc     20726 Mar 14 08:36 stderr.txt
[2026-03-14 08:36:44] HITS file was successfully produced:
[2026-03-14 08:36:44] -rw-------. 1 boinc boinc 282180828 Mar 14 08:34 shared/HITS.pool.root.1
[2026-03-14 08:36:44]  *** Contents of shared directory: ***
[2026-03-14 08:36:44] total 510820
[2026-03-14 08:36:44] -rw-r--r--. 2 boinc boinc 235221400 Mar 13 23:47 ATLAS.root_0
[2026-03-14 08:36:44] -rw-r--r--. 2 boinc boinc     15845 Mar 13 23:47 start_atlas.sh
[2026-03-14 08:36:44] -rw-r--r--. 2 boinc boinc    597546 Mar 13 23:47 input.tar.gz
[2026-03-14 08:36:44] -rw-------. 1 boinc boinc 282180828 Mar 14 08:34 HITS.pool.root.1
[2026-03-14 08:36:44] -rw-------. 1 boinc boinc   5058560 Mar 14 08:36 result.tar.gz
08:36:45 (5273): run_atlas exited; CPU time 123745.259078
08:36:45 (5273): called boinc_finish(0)

</stderr_txt>
]]>

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