Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:05:08 (41872): wrapper (7.7.26015): starting
06:05:08 (41872): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 06:05:08] Arguments: --nthreads 8
[2026-03-13 06:05:08] Threads: 8
[2026-03-13 06:05:08] Checking for CVMFS
[2026-03-13 06:05:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 06:05:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 06:05:08] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 06:05:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 06:05:09] 2.11.2.0 5808 324308 123400 157234 2 50 10781897 18432001 2231 130560 0 242130821 99.968 14832353 8688 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2026-03-13 06:05:09] CVMFS is ok
[2026-03-13 06:05:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 06:05:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 06:05:09] Further information can be found at the LHC@home message board.
[2026-03-13 06:05:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 06:05:09] Checking for apptainer binary...
[2026-03-13 06:05:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 06:05:09] Running /usr/bin/apptainer --version
[2026-03-13 06:05:09] apptainer version 1.3.2-1.el7
[2026-03-13 06:05:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 06:05:09] c-9-34.aglt2.org
[2026-03-13 06:05:09] apptainer works
[2026-03-13 06:05:09] Set ATHENA_PROC_NUMBER=8
[2026-03-13 06:05:09] Set ATHENA_CORE_NUMBER=8
[2026-03-13 06:05:09] Starting ATLAS job with PandaID=7052855040
[2026-03-13 06:05:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 09:22:49]  *** The last 200 lines of the pilot log: ***
[2026-03-13 09:22:49] 2026-03-13 13:22:00,017 | INFO     | intersect: -22956973464.7912
[2026-03-13 09:22:49] 2026-03-13 13:22:00,018 | INFO     | chi2: 1.1814477580467133
[2026-03-13 09:22:49] 2026-03-13 13:22:00,018 | INFO     | sum of square deviations: 2060343747.0
[2026-03-13 09:22:49] 2026-03-13 13:22:00,020 | INFO     | sum of deviations: 27969235507.500004
[2026-03-13 09:22:49] 2026-03-13 13:22:00,020 | INFO     | mean x: 1773402046.5
[2026-03-13 09:22:49] 2026-03-13 13:22:00,020 | INFO     | mean y: 2465936.111702128
[2026-03-13 09:22:49] 2026-03-13 13:22:00,020 | INFO     | intersect: -24071526357.77758
[2026-03-13 09:22:49] 2026-03-13 13:22:00,021 | INFO     | chi2: 1.1818774170347546
[2026-03-13 09:22:49] 2026-03-13 13:22:00,021 | INFO     | current chi2=1.1818774170347546 (change=-0.03636715928528353 %)
[2026-03-13 09:22:49] 2026-03-13 13:22:00,021 | INFO     | right removable region: 187
[2026-03-13 09:22:49] 2026-03-13 13:22:00,021 | INFO     | sum of square deviations: 2060343747.0
[2026-03-13 09:22:49] 2026-03-13 13:22:00,023 | INFO     | sum of deviations: 4340160308.999999
[2026-03-13 09:22:49] 2026-03-13 13:22:00,023 | INFO     | mean x: 1773402351.5
[2026-03-13 09:22:49] 2026-03-13 13:22:00,023 | INFO     | mean y: 2488614.329787234
[2026-03-13 09:22:49] 2026-03-13 13:22:00,023 | INFO     | intersect: -3733223210.0076327
[2026-03-13 09:22:49] 2026-03-13 13:22:00,024 | INFO     | chi2: 0.006874658919041079
[2026-03-13 09:22:49] 2026-03-13 13:22:00,024 | INFO     | current chi2=0.006874658919041079 (change=99.41811570827245 %)
[2026-03-13 09:22:49] 2026-03-13 13:22:00,024 | INFO     | sum of square deviations: 1900284932.0
[2026-03-13 09:22:49] 2026-03-13 13:22:00,025 | INFO     | sum of deviations: 6133908131.000001
[2026-03-13 09:22:49] 2026-03-13 13:22:00,026 | INFO     | mean x: 1773402504.0
[2026-03-13 09:22:49] 2026-03-13 13:22:00,026 | INFO     | mean y: 2486898.2513661203
[2026-03-13 09:22:49] 2026-03-13 13:22:00,026 | INFO     | intersect: -5721858885.710974
[2026-03-13 09:22:49] 2026-03-13 13:22:00,026 | INFO     | chi2: 0.0015993028868659836
[2026-03-13 09:22:49] 2026-03-13 13:22:00,027 | INFO     | current chi2=0.0015993028868659836 (change=76.73625839914303 %)
[2026-03-13 09:22:49] 2026-03-13 13:22:00,027 | INFO     | sum of square deviations: 1748737904.5
[2026-03-13 09:22:49] 2026-03-13 13:22:00,028 | INFO     | sum of deviations: 4798282021.0
[2026-03-13 09:22:49] 2026-03-13 13:22:00,028 | INFO     | mean x: 1773402656.5
[2026-03-13 09:22:49] 2026-03-13 13:22:00,029 | INFO     | mean y: 2488241.0
[2026-03-13 09:22:49] 2026-03-13 13:22:00,029 | INFO     | intersect: -4863470265.864164
[2026-03-13 09:22:49] 2026-03-13 13:22:00,029 | INFO     | chi2: 0.0007456461885914479
[2026-03-13 09:22:49] 2026-03-13 13:22:00,029 | INFO     | current chi2=0.0007456461885914479 (change=53.37679968472847 %)
[2026-03-13 09:22:49] 2026-03-13 13:22:00,030 | INFO     | sum of square deviations: 1605470102.0
[2026-03-13 09:22:49] 2026-03-13 13:22:00,031 | INFO     | sum of deviations: 3962458618.0000005
[2026-03-13 09:22:49] 2026-03-13 13:22:00,031 | INFO     | mean x: 1773402809.0
[2026-03-13 09:22:49] 2026-03-13 13:22:00,031 | INFO     | mean y: 2489127.976878613
[2026-03-13 09:22:49] 2026-03-13 13:22:00,031 | INFO     | intersect: -4374443980.247057
[2026-03-13 09:22:49] 2026-03-13 13:22:00,032 | INFO     | chi2: 0.00046698126792208615
[2026-03-13 09:22:49] 2026-03-13 13:22:00,032 | INFO     | current chi2=0.00046698126792208615 (change=37.37227185399682 %)
[2026-03-13 09:22:49] 2026-03-13 13:22:00,032 | INFO     | sum of square deviations: 1470248962.0
[2026-03-13 09:22:49] 2026-03-13 13:22:00,033 | INFO     | sum of deviations: 3366818597.4999995
[2026-03-13 09:22:49] 2026-03-13 13:22:00,034 | INFO     | mean x: 1773402961.5
[2026-03-13 09:22:49] 2026-03-13 13:22:00,034 | INFO     | mean y: 2489799.351190476
[2026-03-13 09:22:49] 2026-03-13 13:22:00,034 | INFO     | intersect: -4058540832.8471236
[2026-03-13 09:22:49] 2026-03-13 13:22:00,034 | INFO     | chi2: 0.0003761011158485052
[2026-03-13 09:22:49] 2026-03-13 13:22:00,035 | INFO     | current chi2=0.0003761011158485052 (change=19.461198621085572 %)
[2026-03-13 09:22:49] 2026-03-13 13:22:00,035 | INFO     | left removable region: 50
[2026-03-13 09:22:49] 2026-03-13 13:22:00,035 | INFO     | sum of square deviations: 797291228.0
[2026-03-13 09:22:49] 2026-03-13 13:22:00,036 | INFO     | sum of deviations: 1240090777.0
[2026-03-13 09:22:49] 2026-03-13 13:22:00,036 | INFO     | mean x: 1773403541.0
[2026-03-13 09:22:49] 2026-03-13 13:22:00,036 | INFO     | mean y: 2492304.576642336
[2026-03-13 09:22:49] 2026-03-13 13:22:00,036 | INFO     | intersect: -2755823976.6771646
[2026-03-13 09:22:49] 2026-03-13 13:22:00,037 | INFO     | chi2: 8.552559213939827e-05
[2026-03-13 09:22:49] 2026-03-13 13:22:00,037 | INFO     | current memory leak: 1.56 B/s (using 137 data points, chi2=0.00)
[2026-03-13 09:22:49] 2026-03-13 13:22:00,037 | INFO     | could have reported an average CPU frequency of 2999 MHz (10 samples)
[2026-03-13 09:22:49] 2026-03-13 13:22:00,038 | INFO     | ..............................
[2026-03-13 09:22:49] 2026-03-13 13:22:00,038 | INFO     | . Timing measurements:
[2026-03-13 09:22:49] 2026-03-13 13:22:00,038 | INFO     | . get job = 0 s
[2026-03-13 09:22:49] 2026-03-13 13:22:00,038 | INFO     | . initial setup = 5 s
[2026-03-13 09:22:49] 2026-03-13 13:22:00,038 | INFO     | . payload setup = 4 s
[2026-03-13 09:22:49] 2026-03-13 13:22:00,038 | INFO     | . stage-in = 0 s
[2026-03-13 09:22:49] 2026-03-13 13:22:00,039 | INFO     | . payload execution = 11771 s
[2026-03-13 09:22:49] 2026-03-13 13:22:00,039 | INFO     | . stage-out = 2 s
[2026-03-13 09:22:49] 2026-03-13 13:22:00,039 | INFO     | . log creation = 0 s
[2026-03-13 09:22:49] 2026-03-13 13:22:00,039 | INFO     | ..............................
[2026-03-13 09:22:49] 2026-03-13 13:22:00,155 | INFO     | 
[2026-03-13 09:22:49] 2026-03-13 13:22:00,155 | INFO     | job summary report
[2026-03-13 09:22:49] 2026-03-13 13:22:00,155 | INFO     | --------------------------------------------------
[2026-03-13 09:22:49] 2026-03-13 13:22:00,155 | INFO     | PanDA job id: 7052855040
[2026-03-13 09:22:49] 2026-03-13 13:22:00,156 | INFO     | task id: 48967085
[2026-03-13 09:22:49] 2026-03-13 13:22:00,156 | INFO     | errors: (none)
[2026-03-13 09:22:49] 2026-03-13 13:22:00,156 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 09:22:49] 2026-03-13 13:22:00,156 | INFO     | pilot state: finished 
[2026-03-13 09:22:49] 2026-03-13 13:22:00,156 | INFO     | transexitcode: 0
[2026-03-13 09:22:49] 2026-03-13 13:22:00,156 | INFO     | exeerrorcode: 0
[2026-03-13 09:22:49] 2026-03-13 13:22:00,157 | INFO     | exeerrordiag: 
[2026-03-13 09:22:49] 2026-03-13 13:22:00,157 | INFO     | exitcode: 0
[2026-03-13 09:22:49] 2026-03-13 13:22:00,157 | INFO     | exitmsg: OK
[2026-03-13 09:22:49] 2026-03-13 13:22:00,157 | INFO     | cpuconsumptiontime: 89502 s
[2026-03-13 09:22:49] 2026-03-13 13:22:00,157 | INFO     | nevents: 400
[2026-03-13 09:22:49] 2026-03-13 13:22:00,157 | INFO     | neventsw: 0
[2026-03-13 09:22:49] 2026-03-13 13:22:00,157 | INFO     | pid: 2468
[2026-03-13 09:22:49] 2026-03-13 13:22:00,158 | INFO     | pgrp: 2468
[2026-03-13 09:22:49] 2026-03-13 13:22:00,158 | INFO     | corecount: 8
[2026-03-13 09:22:49] 2026-03-13 13:22:00,158 | INFO     | event service: False
[2026-03-13 09:22:49] 2026-03-13 13:22:00,158 | INFO     | sizes: {0: 2279809, 1: 2280270, 11: 2280270, 11780: 2309731, 11781: 2309730, 11783: 2318968, 11786: 2319134}
[2026-03-13 09:22:49] 2026-03-13 13:22:00,158 | INFO     | --------------------------------------------------
[2026-03-13 09:22:49] 2026-03-13 13:22:00,158 | INFO     | 
[2026-03-13 09:22:49] 2026-03-13 13:22:00,159 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-03-13 09:22:49] 2026-03-13 13:22:00,175 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 09:22:49] 2026-03-13 13:22:00,176 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 09:22:49] 2026-03-13 13:22:00,176 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 09:22:49] 2026-03-13 13:22:00,176 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 09:22:49] 2026-03-13 13:22:00,176 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 09:22:49] 2026-03-13 13:22:00,176 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 09:22:49] 2026-03-13 13:22:00,177 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 09:22:49] 2026-03-13 13:22:00,177 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 09:22:49] 2026-03-13 13:22:00,177 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 09:22:49] 2026-03-13 13:22:00,177 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 09:22:49] 2026-03-13 13:22:00,177 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 09:22:49] 2026-03-13 13:22:00,177 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 09:22:49] 2026-03-13 13:22:00,178 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 09:22:49] 2026-03-13 13:22:00,178 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 09:22:49] 2026-03-13 13:22:00,178 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 09:22:49] 2026-03-13 13:22:00,178 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 09:22:49] 2026-03-13 13:22:00,178 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 09:22:49] 2026-03-13 13:22:00,178 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 09:22:49] 2026-03-13 13:22:00,179 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 09:22:49] 2026-03-13 13:22:00,179 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 09:22:49] 2026-03-13 13:22:00,179 | INFO     | job 7052855040 has completed (purged errors)
[2026-03-13 09:22:49] 2026-03-13 13:22:00,179 | INFO     | overall cleanup function is called
[2026-03-13 09:22:49] 2026-03-13 13:22:01,186 | INFO     | --- collectZombieJob: --- 10, [2468]
[2026-03-13 09:22:49] 2026-03-13 13:22:01,186 | INFO     | zombie collector waiting for pid 2468
[2026-03-13 09:22:49] 2026-03-13 13:22:01,187 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 09:22:49] 2026-03-13 13:22:01,187 | INFO     | collected zombie processes
[2026-03-13 09:22:49] 2026-03-13 13:22:01,187 | INFO     | will attempt to kill all subprocesses of pid=2468
[2026-03-13 09:22:49] 2026-03-13 13:22:01,360 | INFO     | process IDs to be killed: [2468] (in reverse order)
[2026-03-13 09:22:49] 2026-03-13 13:22:01,410 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 09:22:49] 2026-03-13 13:22:01,410 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 09:22:49] 2026-03-13 13:22:01,417 | INFO     | did not find any defunct processes belonging to 2468
[2026-03-13 09:22:49] 2026-03-13 13:22:01,424 | INFO     | did not find any defunct processes belonging to 2468
[2026-03-13 09:22:49] 2026-03-13 13:22:01,425 | INFO     | ready for new job
[2026-03-13 09:22:49] 2026-03-13 13:22:01,425 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 09:22:49] 2026-03-13 13:22:01,427 | INFO     | **************************************
[2026-03-13 09:22:49] 2026-03-13 13:22:01,427 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 09:22:49] 2026-03-13 13:22:01,427 | INFO     | **************************************
[2026-03-13 09:22:49] 2026-03-13 13:22:01,428 | INFO     | 
[2026-03-13 09:22:49] 2026-03-13 13:22:01,429 | INFO     | architecture information:
[2026-03-13 09:22:49] 2026-03-13 13:22:01,429 | INFO     | executing command: cat /etc/os-release
[2026-03-13 09:22:49] 2026-03-13 13:22:01,439 | INFO     | cat /etc/os-release:
[2026-03-13 09:22:49] NAME="CentOS Linux"
[2026-03-13 09:22:49] VERSION="7 (Core)"
[2026-03-13 09:22:49] ID="centos"
[2026-03-13 09:22:49] ID_LIKE="rhel fedora"
[2026-03-13 09:22:49] VERSION_ID="7"
[2026-03-13 09:22:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 09:22:49] ANSI_COLOR="0;31"
[2026-03-13 09:22:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 09:22:49] HOME_URL="https://www.centos.org/"
[2026-03-13 09:22:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 09:22:49] 
[2026-03-13 09:22:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 09:22:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 09:22:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 09:22:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 09:22:49] 
[2026-03-13 09:22:49] 2026-03-13 13:22:01,439 | INFO     | **************************************
[2026-03-13 09:22:49] 2026-03-13 13:22:01,941 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-03-13 09:22:49] 2026-03-13 13:22:01,957 | INFO     | sufficient remaining disk space (104452849664 B)
[2026-03-13 09:22:49] 2026-03-13 13:22:01,958 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 09:22:49] 2026-03-13 13:22:01,958 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 09:22:49] 2026-03-13 13:22:01,958 | INFO     | update_server=False
[2026-03-13 09:22:49] 2026-03-13 13:22:01,958 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 09:22:49] 2026-03-13 13:22:01,959 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 09:22:49] 2026-03-13 13:22:01,990 | INFO     | all payload control threads have been joined
[2026-03-13 09:22:49] 2026-03-13 13:22:02,385 | INFO     | all job control threads have been joined
[2026-03-13 09:22:49] 2026-03-13 13:22:02,560 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 09:22:49] 2026-03-13 13:22:02,560 | INFO     | aborting loop
[2026-03-13 09:22:49] 2026-03-13 13:22:02,639 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 09:22:49] 2026-03-13 13:22:02,964 | INFO     | [job] retrieve thread has finished
[2026-03-13 09:22:49] 2026-03-13 13:22:02,964 | INFO     | [job] queue monitor thread has finished
[2026-03-13 09:22:49] 2026-03-13 13:22:02,995 | INFO     | [payload] control thread has finished
[2026-03-13 09:22:49] 2026-03-13 13:22:03,025 | INFO     | all data control threads have been joined
[2026-03-13 09:22:49] 2026-03-13 13:22:03,248 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 09:22:49] 2026-03-13 13:22:03,273 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 09:22:49] 2026-03-13 13:22:03,374 | INFO     | [payload] failed_post thread has finished
[2026-03-13 09:22:49] 2026-03-13 13:22:03,390 | INFO     | [job] control thread has finished
[2026-03-13 09:22:49] 2026-03-13 13:22:03,565 | INFO     | [job] job monitor thread has finished
[2026-03-13 09:22:49] 2026-03-13 13:22:03,779 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 09:22:49] 2026-03-13 13:22:03,914 | INFO     | [payload] validate_post thread has finished
[2026-03-13 09:22:49] 2026-03-13 13:22:04,029 | INFO     | [data] control thread has finished
[2026-03-13 09:22:49] 2026-03-13 13:22:04,203 | INFO     | [job] validate thread has finished
[2026-03-13 09:22:49] 2026-03-13 13:22:04,208 | INFO     | [data] copytool_in thread has finished
[2026-03-13 09:22:49] 2026-03-13 13:22:04,363 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 09:22:49] 2026-03-13 13:22:04,645 | INFO     | [data] copytool_out thread has finished
[2026-03-13 09:22:49] 2026-03-13 13:22:07,254 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 09:22:49] 2026-03-13 13:22:12,835 | INFO     | job.realtimelogging is not enabled
[2026-03-13 09:22:49] 2026-03-13 13:22:13,841 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 09:22:49] 2026-03-13 13:22:32,915 | INFO     | PID=45888 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-13 09:22:49] 2026-03-13 13:22:32,915 | INFO     | .. there are 4 such processes running
[2026-03-13 09:22:49] 2026-03-13 13:22:32,916 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 09:22:49] 2026-03-13 13:22:32,916 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 09:22:49] 2026-03-13 13:22:32,916 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 09:22:49] 2026-03-13 13:22:42,299 | INFO     | [monitor] cgroup control has ended
[2026-03-13 09:22:49] 2026-03-13 13:22:43,833 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140021312448320)>', '<ExcThread(monitor, started 140020866332416)>']
[2026-03-13 09:22:49] 2026-03-13 13:22:43,964 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 09:22:49] 2026-03-13 13:22:43,964 | INFO     | [monitor] control thread has ended
[2026-03-13 09:22:49] 2026-03-13 13:22:48,859 | INFO     | all workflow threads have been joined
[2026-03-13 09:22:49] 2026-03-13 13:22:48,859 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 09:22:49] 2026-03-13 13:22:48,859 | INFO     | traces error code: 0
[2026-03-13 09:22:49] 2026-03-13 13:22:48,860 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 09:22:49] 2026-03-13 13:22:48,959 [wrapper] ==== pilot stdout END ====
[2026-03-13 09:22:49] 2026-03-13 13:22:48,962 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 09:22:49] 2026-03-13 13:22:48,965 [wrapper] pilotpid: 45888
[2026-03-13 09:22:49] 2026-03-13 13:22:48,967 [wrapper] Pilot exit status: 0
[2026-03-13 09:22:49] 2026-03-13 13:22:48,976 [wrapper] pandaids: 7052855040
[2026-03-13 09:22:49] 2026-03-13 13:22:49,030 [wrapper] cleanup supervisor_pilot 26710 45889
[2026-03-13 09:22:49] 2026-03-13 13:22:49,033 [wrapper] Test setup, not cleaning
[2026-03-13 09:22:49] 2026-03-13 13:22:49,035 [wrapper] apfmon messages muted
[2026-03-13 09:22:49] 2026-03-13 13:22:49,038 [wrapper] ==== wrapper stdout END ====
[2026-03-13 09:22:49] 2026-03-13 13:22:49,040 [wrapper] ==== wrapper stderr END ====
[2026-03-13 09:22:49]  *** Error codes and diagnostics ***
[2026-03-13 09:22:49]     "exeErrorCode": 0,
[2026-03-13 09:22:49]     "exeErrorDiag": "",
[2026-03-13 09:22:49]     "pilotErrorCode": 0,
[2026-03-13 09:22:49]     "pilotErrorDiag": "",
[2026-03-13 09:22:49]  *** Listing of results directory ***
[2026-03-13 09:22:49] total 413024
[2026-03-13 09:22:49] -rw-r--r-- 1 boincer umatlas    585013 Mar 12 23:13 pilot3.tar.gz
[2026-03-13 09:22:49] -rwx------ 1 boincer umatlas     36322 Mar 12 23:13 runpilot2-wrapper.sh
[2026-03-13 09:22:49] -rw-r--r-- 1 boincer umatlas      5111 Mar 12 23:13 queuedata.json
[2026-03-13 09:22:49] -rw-r--r-- 1 boincer umatlas       100 Mar 13 06:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 09:22:49] -rwxr-xr-x 1 boincer umatlas      7986 Mar 13 06:05 run_atlas
[2026-03-13 09:22:49] -rw-r--r-- 1 boincer umatlas       105 Mar 13 06:05 job.xml
[2026-03-13 09:22:49] -rw-r--r-- 2 boincer umatlas 216114183 Mar 13 06:05 EVNT.48967083._000658.pool.root.1
[2026-03-13 09:22:49] -rw-r--r-- 2 boincer umatlas     15845 Mar 13 06:05 start_atlas.sh
[2026-03-13 09:22:49] drwxrwx--x 2 boincer umatlas      4096 Mar 13 06:05 shared
[2026-03-13 09:22:49] -rw-r--r-- 2 boincer umatlas    597523 Mar 13 06:05 input.tar.gz
[2026-03-13 09:22:49] -rw-r--r-- 1 boincer umatlas         0 Mar 13 06:05 boinc_lockfile
[2026-03-13 09:22:49] -rw-r--r-- 1 boincer umatlas      2563 Mar 13 06:05 pandaJob.out
[2026-03-13 09:22:49] -rw------- 1 boincer umatlas        57 Mar 13 06:05 setup.sh.local
[2026-03-13 09:22:49] -rw------- 1 boincer umatlas   1006487 Mar 13 06:05 agis_schedconf.cvmfs.json
[2026-03-13 09:22:49] -rw------- 1 boincer umatlas       437 Mar 13 06:05 workernode_map.json
[2026-03-13 09:22:49] drwx------ 5 boincer umatlas      4096 Mar 13 06:05 pilot3
[2026-03-13 09:22:49] -rw-r--r-- 1 boincer umatlas      6037 Mar 13 09:19 init_data.xml
[2026-03-13 09:22:49] -rw------- 1 boincer umatlas 198743549 Mar 13 09:21 HITS.48967085._016526.pool.root.1
[2026-03-13 09:22:49] -rw-r--r-- 1 boincer umatlas       530 Mar 13 09:21 boinc_task_state.xml
[2026-03-13 09:22:49] -rw------- 1 boincer umatlas      1048 Mar 13 09:21 memory_monitor_summary.json
[2026-03-13 09:22:49] -rw------- 1 boincer umatlas   1511578 Mar 13 09:21 agis_ddmendpoints.agis.ALL.json
[2026-03-13 09:22:49] -rw------- 1 boincer umatlas    422406 Mar 13 09:21 log.48967085._016526.job.log.tgz.1
[2026-03-13 09:22:49] -rw------- 1 boincer umatlas      6394 Mar 13 09:22 heartbeat.json
[2026-03-13 09:22:49] -rw------- 1 boincer umatlas        95 Mar 13 09:22 pilot_heartbeat.json
[2026-03-13 09:22:49] -rw-r--r-- 1 boincer umatlas      8192 Mar 13 09:22 boinc_mmap_file
[2026-03-13 09:22:49] -rw-r--r-- 1 boincer umatlas        28 Mar 13 09:22 wrapper_checkpoint.txt
[2026-03-13 09:22:49] -rw------- 1 boincer umatlas      4890 Mar 13 09:22 pilotlog.txt
[2026-03-13 09:22:49] -rw------- 1 boincer umatlas   1645090 Mar 13 09:22 log.48967085._016526.job.log.1
[2026-03-13 09:22:49] -rw------- 1 boincer umatlas       357 Mar 13 09:22 output.list
[2026-03-13 09:22:49] -rw-r--r-- 1 boincer umatlas       620 Mar 13 09:22 runtime_log
[2026-03-13 09:22:49] -rw------- 1 boincer umatlas   2088960 Mar 13 09:22 result.tar.gz
[2026-03-13 09:22:49] -rw-r--r-- 1 boincer umatlas      9332 Mar 13 09:22 runtime_log.err
[2026-03-13 09:22:49] -rw------- 1 boincer umatlas       658 Mar 13 09:22 rd3LDmi87K9n9Rq4apOajLDm4fhM0noT9bVooX4SDmkrlLDm67ra1m.diag
[2026-03-13 09:22:49] -rw-r--r-- 1 boincer umatlas     20886 Mar 13 09:22 stderr.txt
[2026-03-13 09:22:49] HITS file was successfully produced:
[2026-03-13 09:22:49] -rw------- 1 boincer umatlas 198743549 Mar 13 09:21 shared/HITS.pool.root.1
[2026-03-13 09:22:49]  *** Contents of shared directory: ***
[2026-03-13 09:22:49] total 407784
[2026-03-13 09:22:49] -rw-r--r-- 2 boincer umatlas 216114183 Mar 13 06:05 ATLAS.root_0
[2026-03-13 09:22:49] -rw-r--r-- 2 boincer umatlas     15845 Mar 13 06:05 start_atlas.sh
[2026-03-13 09:22:49] -rw-r--r-- 2 boincer umatlas    597523 Mar 13 06:05 input.tar.gz
[2026-03-13 09:22:49] -rw------- 1 boincer umatlas 198743549 Mar 13 09:21 HITS.pool.root.1
[2026-03-13 09:22:49] -rw------- 1 boincer umatlas   2088960 Mar 13 09:22 result.tar.gz
09:22:50 (41872): run_atlas exited; CPU time 89792.233986
09:22:50 (41872): called boinc_finish(0)

</stderr_txt>
]]>

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