Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:25:21 (368787): wrapper (7.7.26015): starting
06:25:21 (368787): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 06:25:21] Arguments: --nthreads 8
[2026-03-13 06:25:21] Threads: 8
[2026-03-13 06:25:21] Checking for CVMFS
[2026-03-13 06:25:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 06:25:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 06:25:21] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 06:25:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 06:25:22] 2.13.3.0 14106 183958 299672 157235 0 287 36987868 40960001 61701 16776704 0 2123756522 99.744 1421377235 45916 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-13 06:25:22] CVMFS is ok
[2026-03-13 06:25:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 06:25:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 06:25:22] Further information can be found at the LHC@home message board.
[2026-03-13 06:25:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 06:25:22] Checking for apptainer binary...
[2026-03-13 06:25:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 06:25:22] Running /usr/bin/apptainer --version
[2026-03-13 06:25:22] apptainer version 1.4.5-2.el9
[2026-03-13 06:25:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 06:25:22] c8-7-5.aglt2.org
[2026-03-13 06:25:22] apptainer works
[2026-03-13 06:25:22] Set ATHENA_PROC_NUMBER=8
[2026-03-13 06:25:22] Set ATHENA_CORE_NUMBER=8
[2026-03-13 06:25:22] Starting ATLAS job with PandaID=7052862899
[2026-03-13 06:25:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
08:20:08 (368787): BOINC client no longer exists - exiting
08:20:08 (368787): timer handler: client dead, exiting
08:32:30 (1093793): wrapper (7.7.26015): starting
08:32:30 (1093793): wrapper: running run_atlas (--nthreads 10)
[2026-03-13 08:32:30] Arguments: --nthreads 10
[2026-03-13 08:32:30] Threads: 10
[2026-03-13 08:32:30] This job has been restarted, cleaning up previous attempt
[2026-03-13 08:32:30] Checking for CVMFS
[2026-03-13 08:32:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 08:32:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 08:32:31] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 08:32:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 08:32:31] 2.13.3.0 14106 184085 302100 157240 1 460 39396383 40960000 59043 16776704 0 2124678533 99.744 1421924618 45917 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-13 08:32:31] CVMFS is ok
[2026-03-13 08:32:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 08:32:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 08:32:31] Further information can be found at the LHC@home message board.
[2026-03-13 08:32:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 08:32:31] Checking for apptainer binary...
[2026-03-13 08:32:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 08:32:31] Running /usr/bin/apptainer --version
[2026-03-13 08:32:32] apptainer version 1.4.5-2.el9
[2026-03-13 08:32:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 08:32:32] c8-7-5.aglt2.org
[2026-03-13 08:32:32] apptainer works
[2026-03-13 08:32:32] Set ATHENA_PROC_NUMBER=10
[2026-03-13 08:32:32] Set ATHENA_CORE_NUMBER=10
[2026-03-13 08:32:32] Starting ATLAS job with PandaID=7052862899
[2026-03-13 08:32:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 10:56:24]  *** The last 200 lines of the pilot log: ***
[2026-03-13 10:56:24] 2026-03-13 14:55:16,125 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 10:56:24] 2026-03-13 14:55:16,125 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 10:56:24] 2026-03-13 14:55:16,125 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 10:56:24] 2026-03-13 14:55:16,127 | INFO     | fitting pss+swap vs Time
[2026-03-13 10:56:24] 2026-03-13 14:55:16,127 | INFO     | sum of square deviations: 832753957.7841754
[2026-03-13 10:56:24] 2026-03-13 14:55:16,127 | INFO     | sum of deviations: 11035339201.654686
[2026-03-13 10:56:24] 2026-03-13 14:55:16,127 | INFO     | mean x: 1773409493.0935252
[2026-03-13 10:56:24] 2026-03-13 14:55:16,127 | INFO     | mean y: 2547202.9496402876
[2026-03-13 10:56:24] 2026-03-13 14:55:16,127 | INFO     | intersect: -23498001928.986805
[2026-03-13 10:56:24] 2026-03-13 14:55:16,127 | INFO     | chi2: 2.3951175556668884
[2026-03-13 10:56:24] 2026-03-13 14:55:16,128 | INFO     | sum of square deviations: 746086530.2388048
[2026-03-13 10:56:24] 2026-03-13 14:55:16,128 | INFO     | sum of deviations: 19447282889.2388
[2026-03-13 10:56:24] 2026-03-13 14:55:16,128 | INFO     | mean x: 1773409340.597015
[2026-03-13 10:56:24] 2026-03-13 14:55:16,128 | INFO     | mean y: 2561544.0970149254
[2026-03-13 10:56:24] 2026-03-13 14:55:16,128 | INFO     | intersect: -46222630477.49034
[2026-03-13 10:56:24] 2026-03-13 14:55:16,128 | INFO     | chi2: 1.7136235232227168
[2026-03-13 10:56:24] 2026-03-13 14:55:16,128 | INFO     | current chi2=1.7136235232227168 (change=28.453469051310037 %)
[2026-03-13 10:56:24] 2026-03-13 14:55:16,151 | INFO     | sum of square deviations: 665619076.3720928
[2026-03-13 10:56:24] 2026-03-13 14:55:16,151 | INFO     | sum of deviations: 18716639155.39535
[2026-03-13 10:56:24] 2026-03-13 14:55:16,151 | INFO     | mean x: 1773409188.0697675
[2026-03-13 10:56:24] 2026-03-13 14:55:16,151 | INFO     | mean y: 2560158.511627907
[2026-03-13 10:56:24] 2026-03-13 14:55:16,151 | INFO     | intersect: -49864189497.87807
[2026-03-13 10:56:24] 2026-03-13 14:55:16,151 | INFO     | chi2: 1.7162280939852241
[2026-03-13 10:56:24] 2026-03-13 14:55:16,151 | INFO     | current chi2=1.7162280939852241 (change=-0.15199200566580903 %)
[2026-03-13 10:56:24] 2026-03-13 14:55:16,151 | INFO     | right removable region: 128
[2026-03-13 10:56:24] 2026-03-13 14:55:16,152 | INFO     | sum of square deviations: 746078600.2388048
[2026-03-13 10:56:24] 2026-03-13 14:55:16,152 | INFO     | sum of deviations: -13727258668.79105
[2026-03-13 10:56:24] 2026-03-13 14:55:16,152 | INFO     | mean x: 1773409645.597015
[2026-03-13 10:56:24] 2026-03-13 14:55:16,152 | INFO     | mean y: 2590167.5223880596
[2026-03-13 10:56:24] 2026-03-13 14:55:16,152 | INFO     | intersect: 32631930994.410126
[2026-03-13 10:56:24] 2026-03-13 14:55:16,152 | INFO     | chi2: 0.7213444826506958
[2026-03-13 10:56:24] 2026-03-13 14:55:16,152 | INFO     | current chi2=0.7213444826506958 (change=69.88271072774768 %)
[2026-03-13 10:56:24] 2026-03-13 14:55:16,152 | INFO     | sum of square deviations: 665635917.6899253
[2026-03-13 10:56:24] 2026-03-13 14:55:16,153 | INFO     | sum of deviations: -13484771278.53489
[2026-03-13 10:56:24] 2026-03-13 14:55:16,153 | INFO     | mean x: 1773409798.1007752
[2026-03-13 10:56:24] 2026-03-13 14:55:16,153 | INFO     | mean y: 2589688.3488372094
[2026-03-13 10:56:24] 2026-03-13 14:55:16,153 | INFO     | intersect: 35929174890.50377
[2026-03-13 10:56:24] 2026-03-13 14:55:16,153 | INFO     | chi2: 0.7205662252607421
[2026-03-13 10:56:24] 2026-03-13 14:55:16,153 | INFO     | current chi2=0.7205662252607421 (change=0.10788983747320127 %)
[2026-03-13 10:56:24] 2026-03-13 14:55:16,153 | INFO     | left removable region: 20
[2026-03-13 10:56:24] 2026-03-13 14:55:16,153 | INFO     | sum of square deviations: 390578372.2499988
[2026-03-13 10:56:24] 2026-03-13 14:55:16,153 | INFO     | sum of deviations: -3067359911.0000033
[2026-03-13 10:56:24] 2026-03-13 14:55:16,154 | INFO     | mean x: 1773409767.5833333
[2026-03-13 10:56:24] 2026-03-13 14:55:16,154 | INFO     | mean y: 2603412.888888889
[2026-03-13 10:56:24] 2026-03-13 14:55:16,154 | INFO     | intersect: 13929862097.297436
[2026-03-13 10:56:24] 2026-03-13 14:55:16,154 | INFO     | chi2: 0.0075146930233860225
[2026-03-13 10:56:24] 2026-03-13 14:55:16,154 | INFO     | current memory leak: -7.85 B/s (using 108 data points, chi2=0.01)
[2026-03-13 10:56:24] 2026-03-13 14:55:16,154 | INFO     | could have reported an average CPU frequency of 3799 MHz (8 samples)
[2026-03-13 10:56:24] 2026-03-13 14:55:16,154 | INFO     | ..............................
[2026-03-13 10:56:24] 2026-03-13 14:55:16,154 | INFO     | . Timing measurements:
[2026-03-13 10:56:24] 2026-03-13 14:55:16,154 | INFO     | . get job = 0 s
[2026-03-13 10:56:24] 2026-03-13 14:55:16,154 | INFO     | . initial setup = 2 s
[2026-03-13 10:56:24] 2026-03-13 14:55:16,154 | INFO     | . payload setup = 35 s
[2026-03-13 10:56:24] 2026-03-13 14:55:16,154 | INFO     | . stage-in = 0 s
[2026-03-13 10:56:24] 2026-03-13 14:55:16,154 | INFO     | . payload execution = 8456 s
[2026-03-13 10:56:24] 2026-03-13 14:55:16,165 | INFO     | . stage-out = 4 s
[2026-03-13 10:56:24] 2026-03-13 14:55:16,165 | INFO     | . log creation = 0 s
[2026-03-13 10:56:24] 2026-03-13 14:55:16,165 | INFO     | ..............................
[2026-03-13 10:56:24] 2026-03-13 14:55:16,404 | INFO     | 
[2026-03-13 10:56:24] 2026-03-13 14:55:16,404 | INFO     | job summary report
[2026-03-13 10:56:24] 2026-03-13 14:55:16,404 | INFO     | --------------------------------------------------
[2026-03-13 10:56:24] 2026-03-13 14:55:16,404 | INFO     | PanDA job id: 7052862899
[2026-03-13 10:56:24] 2026-03-13 14:55:16,404 | INFO     | task id: 48967085
[2026-03-13 10:56:24] 2026-03-13 14:55:16,404 | INFO     | errors: (none)
[2026-03-13 10:56:24] 2026-03-13 14:55:16,404 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 10:56:24] 2026-03-13 14:55:16,404 | INFO     | pilot state: finished 
[2026-03-13 10:56:24] 2026-03-13 14:55:16,404 | INFO     | transexitcode: 0
[2026-03-13 10:56:24] 2026-03-13 14:55:16,404 | INFO     | exeerrorcode: 0
[2026-03-13 10:56:24] 2026-03-13 14:55:16,404 | INFO     | exeerrordiag: 
[2026-03-13 10:56:24] 2026-03-13 14:55:16,404 | INFO     | exitcode: 0
[2026-03-13 10:56:24] 2026-03-13 14:55:16,404 | INFO     | exitmsg: OK
[2026-03-13 10:56:24] 2026-03-13 14:55:16,404 | INFO     | cpuconsumptiontime: 26492 s
[2026-03-13 10:56:24] 2026-03-13 14:55:16,404 | INFO     | nevents: 400
[2026-03-13 10:56:24] 2026-03-13 14:55:16,404 | INFO     | neventsw: 0
[2026-03-13 10:56:24] 2026-03-13 14:55:16,404 | INFO     | pid: 1125979
[2026-03-13 10:56:24] 2026-03-13 14:55:16,404 | INFO     | pgrp: 1125979
[2026-03-13 10:56:24] 2026-03-13 14:55:16,405 | INFO     | corecount: 10
[2026-03-13 10:56:24] 2026-03-13 14:55:16,405 | INFO     | event service: False
[2026-03-13 10:56:24] 2026-03-13 14:55:16,405 | INFO     | sizes: {0: 2265032, 1: 2280270, 8496: 2308042, 8501: 2317040, 8505: 2317290}
[2026-03-13 10:56:24] 2026-03-13 14:55:16,405 | INFO     | --------------------------------------------------
[2026-03-13 10:56:24] 2026-03-13 14:55:16,405 | INFO     | 
[2026-03-13 10:56:24] 2026-03-13 14:55:16,405 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-13 10:56:24] 2026-03-13 14:55:16,578 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 10:56:24] 2026-03-13 14:55:16,578 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 10:56:24] 2026-03-13 14:55:16,578 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 10:56:24] 2026-03-13 14:55:16,578 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 10:56:24] 2026-03-13 14:55:16,578 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 10:56:24] 2026-03-13 14:55:16,578 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 10:56:24] 2026-03-13 14:55:16,578 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 10:56:24] 2026-03-13 14:55:16,578 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 10:56:24] 2026-03-13 14:55:16,578 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 10:56:24] 2026-03-13 14:55:16,578 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 10:56:24] 2026-03-13 14:55:16,578 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 10:56:24] 2026-03-13 14:55:16,578 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 10:56:24] 2026-03-13 14:55:16,578 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 10:56:24] 2026-03-13 14:55:16,578 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 10:56:24] 2026-03-13 14:55:16,578 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 10:56:24] 2026-03-13 14:55:16,578 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 10:56:24] 2026-03-13 14:55:16,579 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 10:56:24] 2026-03-13 14:55:16,579 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 10:56:24] 2026-03-13 14:55:16,579 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 10:56:24] 2026-03-13 14:55:16,579 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 10:56:24] 2026-03-13 14:55:16,579 | INFO     | job 7052862899 has completed (purged errors)
[2026-03-13 10:56:24] 2026-03-13 14:55:16,579 | INFO     | overall cleanup function is called
[2026-03-13 10:56:24] 2026-03-13 14:55:17,312 | WARNING  | process 1125979 can no longer be monitored (due to stat problems) - aborting
[2026-03-13 10:56:24] 2026-03-13 14:55:17,590 | INFO     | --- collectZombieJob: --- 10, [1125979]
[2026-03-13 10:56:24] 2026-03-13 14:55:17,590 | INFO     | zombie collector waiting for pid 1125979
[2026-03-13 10:56:24] 2026-03-13 14:55:17,590 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 10:56:24] 2026-03-13 14:55:17,590 | INFO     | collected zombie processes
[2026-03-13 10:56:24] 2026-03-13 14:55:17,590 | INFO     | will attempt to kill all subprocesses of pid=1125979
[2026-03-13 10:56:24] 2026-03-13 14:55:21,638 | INFO     | using path: /tmp/boinchome/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 10:56:24] 2026-03-13 14:55:22,501 | INFO     | PID=1114906 has CPU usage=13.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-13 10:56:24] 2026-03-13 14:55:22,501 | INFO     | .. there are 90 such processes running
[2026-03-13 10:56:24] 2026-03-13 14:55:24,429 | INFO     | process IDs to be killed: [1125979] (in reverse order)
[2026-03-13 10:56:24] 2026-03-13 14:55:25,224 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 10:56:24] 2026-03-13 14:55:25,224 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 10:56:24] 2026-03-13 14:55:25,256 | INFO     | did not find any defunct processes belonging to 1125979
[2026-03-13 10:56:24] 2026-03-13 14:55:25,288 | INFO     | did not find any defunct processes belonging to 1125979
[2026-03-13 10:56:24] 2026-03-13 14:55:25,288 | INFO     | ready for new job
[2026-03-13 10:56:24] 2026-03-13 14:55:25,289 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 10:56:24] 2026-03-13 14:55:25,290 | INFO     | **************************************
[2026-03-13 10:56:24] 2026-03-13 14:55:25,290 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 10:56:24] 2026-03-13 14:55:25,290 | INFO     | **************************************
[2026-03-13 10:56:24] 2026-03-13 14:55:25,290 | INFO     | 
[2026-03-13 10:56:24] 2026-03-13 14:55:25,348 | INFO     | architecture information:
[2026-03-13 10:56:24] 2026-03-13 14:55:25,367 | INFO     | executing command: cat /etc/os-release
[2026-03-13 10:56:24] 2026-03-13 14:55:25,540 | INFO     | cat /etc/os-release:
[2026-03-13 10:56:24] NAME="CentOS Linux"
[2026-03-13 10:56:24] VERSION="7 (Core)"
[2026-03-13 10:56:24] ID="centos"
[2026-03-13 10:56:24] ID_LIKE="rhel fedora"
[2026-03-13 10:56:24] VERSION_ID="7"
[2026-03-13 10:56:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 10:56:24] ANSI_COLOR="0;31"
[2026-03-13 10:56:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 10:56:24] HOME_URL="https://www.centos.org/"
[2026-03-13 10:56:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 10:56:24] 
[2026-03-13 10:56:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 10:56:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 10:56:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 10:56:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 10:56:24] 
[2026-03-13 10:56:24] 2026-03-13 14:55:25,540 | INFO     | **************************************
[2026-03-13 10:56:24] 2026-03-13 14:55:25,850 | INFO     | number of running child processes to parent process 1125979: 1
[2026-03-13 10:56:24] 2026-03-13 14:55:25,850 | INFO     | maximum number of monitored processes: 6
[2026-03-13 10:56:24] 2026-03-13 14:55:25,850 | INFO     | aborting job monitoring since job object (job id=7052862899) has expired
[2026-03-13 10:56:24] 2026-03-13 14:55:26,044 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-13 10:56:24] 2026-03-13 14:55:26,146 | INFO     | sufficient remaining disk space (169019965440 B)
[2026-03-13 10:56:24] 2026-03-13 14:55:26,146 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 10:56:24] 2026-03-13 14:55:26,146 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 10:56:24] 2026-03-13 14:55:26,147 | INFO     | update_server=False
[2026-03-13 10:56:24] 2026-03-13 14:55:26,147 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 10:56:24] 2026-03-13 14:55:26,147 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 10:56:24] 2026-03-13 14:55:26,152 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 10:56:24] 2026-03-13 14:55:26,153 | INFO     | will abort loop
[2026-03-13 10:56:24] 2026-03-13 14:55:26,280 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 10:56:24] 2026-03-13 14:55:26,312 | INFO     | all job control threads have been joined
[2026-03-13 10:56:24] 2026-03-13 14:55:26,417 | INFO     | all payload control threads have been joined
[2026-03-13 10:56:24] 2026-03-13 14:55:26,682 | INFO     | all data control threads have been joined
[2026-03-13 10:56:24] 2026-03-13 14:55:27,153 | INFO     | [job] retrieve thread has finished
[2026-03-13 10:56:24] 2026-03-13 14:55:27,153 | INFO     | [job] queue monitor thread has finished
[2026-03-13 10:56:24] 2026-03-13 14:55:27,155 | INFO     | [data] copytool_in thread has finished
[2026-03-13 10:56:24] 2026-03-13 14:55:27,159 | INFO     | [job] job monitor thread has finished
[2026-03-13 10:56:24] 2026-03-13 14:55:27,318 | INFO     | [job] control thread has finished
[2026-03-13 10:56:24] 2026-03-13 14:55:27,423 | INFO     | [payload] control thread has finished
[2026-03-13 10:56:24] 2026-03-13 14:55:27,470 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 10:56:24] 2026-03-13 14:55:27,653 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 10:56:24] 2026-03-13 14:55:27,661 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 10:56:24] 2026-03-13 14:55:27,688 | INFO     | [data] control thread has finished
[2026-03-13 10:56:24] 2026-03-13 14:55:27,708 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 10:56:24] 2026-03-13 14:55:27,809 | INFO     | [job] validate thread has finished
[2026-03-13 10:56:24] 2026-03-13 14:55:28,085 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 10:56:24] 2026-03-13 14:55:28,285 | INFO     | [payload] validate_post thread has finished
[2026-03-13 10:56:24] 2026-03-13 14:55:28,312 | INFO     | [payload] failed_post thread has finished
[2026-03-13 10:56:24] 2026-03-13 14:55:29,477 | INFO     | [data] copytool_out thread has finished
[2026-03-13 10:56:24] 2026-03-13 14:55:30,297 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 10:56:24] 2026-03-13 14:55:43,935 | INFO     | [monitor] cgroup control has ended
[2026-03-13 10:56:24] 2026-03-13 14:55:46,033 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140586602997568)>', '<ExcThread(monitor, started 140586241726208)>']
[2026-03-13 10:56:24] 2026-03-13 14:55:51,059 | INFO     | all workflow threads have been joined
[2026-03-13 10:56:24] 2026-03-13 14:55:51,059 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 10:56:24] 2026-03-13 14:55:51,071 | INFO     | traces error code: 0
[2026-03-13 10:56:24] 2026-03-13 14:55:51,071 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 10:56:24] 2026-03-13 14:55:56,908 | INFO     | PID=1114906 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-13 10:56:24] 2026-03-13 14:55:56,908 | INFO     | .. there are 90 such processes running
[2026-03-13 10:56:24] 2026-03-13 14:55:56,909 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 10:56:24] 2026-03-13 14:55:56,909 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 10:56:24] 2026-03-13 14:55:56,909 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 10:56:24] 2026-03-13 14:55:56,909 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 10:56:24] 2026-03-13 14:55:56,909 | INFO     | [monitor] control thread has ended
[2026-03-13 10:56:24] 2026-03-13 14:55:58,496 [wrapper] ==== pilot stdout END ====
[2026-03-13 10:56:24] 2026-03-13 14:55:58,627 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 10:56:24] 2026-03-13 14:55:58,647 [wrapper] pilotpid: 1114906
[2026-03-13 10:56:24] 2026-03-13 14:55:58,673 [wrapper] Pilot exit status: 0
[2026-03-13 10:56:24] 2026-03-13 14:55:58,853 [wrapper] pandaids: 7052862899 7052862899
[2026-03-13 10:56:24] 2026-03-13 14:55:59,431 [wrapper] cleanup supervisor_pilot 1790991 1114907
[2026-03-13 10:56:24] 2026-03-13 14:55:59,434 [wrapper] Test setup, not cleaning
[2026-03-13 10:56:24] 2026-03-13 14:55:59,436 [wrapper] apfmon messages muted
[2026-03-13 10:56:24] 2026-03-13 14:55:59,438 [wrapper] ==== wrapper stdout END ====
[2026-03-13 10:56:24] 2026-03-13 14:55:59,452 [wrapper] ==== wrapper stderr END ====
[2026-03-13 10:56:24]  *** Error codes and diagnostics ***
[2026-03-13 10:56:24]     "exeErrorCode": 0,
[2026-03-13 10:56:24]     "exeErrorDiag": "",
[2026-03-13 10:56:24]     "pilotErrorCode": 0,
[2026-03-13 10:56:24]     "pilotErrorDiag": "",
[2026-03-13 10:56:24]  *** Listing of results directory ***
[2026-03-13 10:56:24] total 611772
[2026-03-13 10:56:24] drwx------. 5 boincer umatlas      4096 Mar 10 12:00 pilot3
[2026-03-13 10:56:24] -rw-r--r--. 1 boincer umatlas    585013 Mar 12 23:13 pilot3.tar.gz
[2026-03-13 10:56:24] -rwx------. 1 boincer umatlas     36322 Mar 12 23:17 runpilot2-wrapper.sh
[2026-03-13 10:56:24] -rw-r--r--. 1 boincer umatlas      5111 Mar 12 23:18 queuedata.json
[2026-03-13 10:56:24] -rw-r--r--. 1 boincer umatlas       100 Mar 13 06:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 10:56:24] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 13 06:25 run_atlas
[2026-03-13 10:56:24] -rw-r--r--. 1 boincer umatlas       105 Mar 13 06:25 job.xml
[2026-03-13 10:56:24] -rw-r--r--. 3 boincer umatlas 211893570 Mar 13 06:25 EVNT.48967083._000709.pool.root.1
[2026-03-13 10:56:24] -rw-r--r--. 3 boincer umatlas 211893570 Mar 13 06:25 ATLAS.root_0
[2026-03-13 10:56:24] -rw-r--r--. 2 boincer umatlas     15845 Mar 13 06:25 start_atlas.sh
[2026-03-13 10:56:24] drwxrwx--x. 2 boincer umatlas      4096 Mar 13 06:25 shared
[2026-03-13 10:56:24] -rw-r--r--. 2 boincer umatlas    597527 Mar 13 06:25 input.tar.gz
[2026-03-13 10:56:24] -rw-r--r--. 1 boincer umatlas         0 Mar 13 06:25 boinc_lockfile
[2026-03-13 10:56:24] -rw-r--r--. 1 boincer umatlas      2563 Mar 13 08:32 pandaJob.out
[2026-03-13 10:56:24] -rw-------. 1 boincer umatlas        57 Mar 13 08:32 setup.sh.local
[2026-03-13 10:56:24] -rw-------. 1 boincer umatlas   1006473 Mar 13 08:33 agis_schedconf.cvmfs.json
[2026-03-13 10:56:24] -rw-------. 1 boincer umatlas       430 Mar 13 08:33 workernode_map.json
[2026-03-13 10:56:24] -rw-------. 1 boincer umatlas 195878728 Mar 13 10:54 HITS.48967085._017482.pool.root.1
[2026-03-13 10:56:24] -rw-r--r--. 1 boincer umatlas       531 Mar 13 10:54 boinc_task_state.xml
[2026-03-13 10:56:24] -rw-------. 1 boincer umatlas      1034 Mar 13 10:55 memory_monitor_summary.json
[2026-03-13 10:56:24] -rw-------. 1 boincer umatlas   1511578 Mar 13 10:55 agis_ddmendpoints.agis.ALL.json
[2026-03-13 10:56:24] -rw-------. 1 boincer umatlas    395419 Mar 13 10:55 log.48967085._017482.job.log.tgz.1
[2026-03-13 10:56:24] -rw-------. 1 boincer umatlas      6325 Mar 13 10:55 heartbeat.json
[2026-03-13 10:56:24] -rw-------. 1 boincer umatlas        96 Mar 13 10:55 pilot_heartbeat.json
[2026-03-13 10:56:24] -rw-------. 1 boincer umatlas       823 Mar 13 10:55 pilotlog.txt
[2026-03-13 10:56:24] -rw-r--r--. 1 boincer umatlas      7173 Mar 13 10:55 init_data.xml
[2026-03-13 10:56:24] -rw-------. 1 boincer umatlas   1027949 Mar 13 10:55 log.48967085._017482.job.log.1
[2026-03-13 10:56:24] -rw-------. 1 boincer umatlas       357 Mar 13 10:55 output.list
[2026-03-13 10:56:24] -rw-r--r--. 1 boincer umatlas       620 Mar 13 10:55 runtime_log
[2026-03-13 10:56:24] -rw-------. 1 boincer umatlas   1443840 Mar 13 10:55 result.tar.gz
[2026-03-13 10:56:24] -rw-------. 1 boincer umatlas       774 Mar 13 10:55 xs2KDmjC8K9n9Rq4apOajLDm4fhM0noT9bVooX4SDml0lLDmagQfgn.diag
[2026-03-13 10:56:24] -rw-r--r--. 1 boincer umatlas      9418 Mar 13 10:55 runtime_log.err
[2026-03-13 10:56:24] -rw-r--r--. 1 boincer umatlas      8192 Mar 13 10:56 boinc_mmap_file
[2026-03-13 10:56:24] -rw-r--r--. 1 boincer umatlas        28 Mar 13 10:56 wrapper_checkpoint.txt
[2026-03-13 10:56:24] -rw-r--r--. 1 boincer umatlas     23539 Mar 13 10:56 stderr.txt
[2026-03-13 10:56:24] HITS file was successfully produced:
[2026-03-13 10:56:24] -rw-------. 1 boincer umatlas 195878728 Mar 13 10:54 shared/HITS.pool.root.1
[2026-03-13 10:56:24]  *** Contents of shared directory: ***
[2026-03-13 10:56:24] total 400236
[2026-03-13 10:56:24] -rw-r--r--. 3 boincer umatlas 211893570 Mar 13 06:25 ATLAS.root_0
[2026-03-13 10:56:24] -rw-r--r--. 2 boincer umatlas     15845 Mar 13 06:25 start_atlas.sh
[2026-03-13 10:56:24] -rw-r--r--. 2 boincer umatlas    597527 Mar 13 06:25 input.tar.gz
[2026-03-13 10:56:24] -rw-------. 1 boincer umatlas 195878728 Mar 13 10:54 HITS.pool.root.1
[2026-03-13 10:56:24] -rw-------. 1 boincer umatlas   1443840 Mar 13 10:55 result.tar.gz
10:56:26 (1093793): run_atlas exited; CPU time 26825.986418
10:56:26 (1093793): called boinc_finish(0)

</stderr_txt>
]]>

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