Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:25:28 (20006): wrapper (7.7.26015): starting
05:25:28 (20006): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 05:25:28] Arguments: --nthreads 8
[2026-03-13 05:25:28] Threads: 8
[2026-03-13 05:25:28] Checking for CVMFS
[2026-03-13 05:25:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 05:25:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 05:25:28] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 05:25:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 05:25:28] 2.11.2.0 14729 271565 162176 157234 1 49 11759558 18432000 1833 130560 0 177768388 99.983 9992844 26310 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-13 05:25:28] CVMFS is ok
[2026-03-13 05:25:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 05:25:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 05:25:28] Further information can be found at the LHC@home message board.
[2026-03-13 05:25:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 05:25:28] Checking for apptainer binary...
[2026-03-13 05:25:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 05:25:28] Running /usr/bin/apptainer --version
[2026-03-13 05:25:28] apptainer version 1.3.2-1.el7
[2026-03-13 05:25:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 05:25:29] c-206-30.aglt2.org
[2026-03-13 05:25:29] apptainer works
[2026-03-13 05:25:29] Set ATHENA_PROC_NUMBER=8
[2026-03-13 05:25:29] Set ATHENA_CORE_NUMBER=8
[2026-03-13 05:25:29] Starting ATLAS job with PandaID=7052862499
[2026-03-13 05:25:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
07:00:02 (20006): BOINC client no longer exists - exiting
07:00:02 (20006): timer handler: client dead, exiting
07:14:01 (6440): wrapper (7.7.26015): starting
07:14:01 (6440): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 07:14:01] Arguments: --nthreads 8
[2026-03-13 07:14:01] Threads: 8
[2026-03-13 07:14:01] This job has been restarted, cleaning up previous attempt
[2026-03-13 07:14:01] Checking for CVMFS
[2026-03-13 07:14:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 07:14:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 07:14:02] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 07:14:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 07:14:02] 2.11.2.0 14729 271673 158688 157237 2 1 11779870 18432001 1 130560 0 177873431 99.983 9998405 26314 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-13 07:14:02] CVMFS is ok
[2026-03-13 07:14:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 07:14:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 07:14:02] Further information can be found at the LHC@home message board.
[2026-03-13 07:14:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 07:14:02] Checking for apptainer binary...
[2026-03-13 07:14:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 07:14:02] Running /usr/bin/apptainer --version
[2026-03-13 07:14:02] apptainer version 1.3.2-1.el7
[2026-03-13 07:14:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 07:14:03] c-206-30.aglt2.org
[2026-03-13 07:14:03] apptainer works
[2026-03-13 07:14:03] Set ATHENA_PROC_NUMBER=8
[2026-03-13 07:14:03] Set ATHENA_CORE_NUMBER=8
[2026-03-13 07:14:03] Starting ATLAS job with PandaID=7052862499
[2026-03-13 07:14:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 10:54:42]  *** The last 200 lines of the pilot log: ***
[2026-03-13 10:54:42] 2026-03-13 14:53:59,254 | INFO     | log transfer has been attempted: DONE
[2026-03-13 10:54:42] 2026-03-13 14:53:59,254 | INFO     | job 7052862499 has finished - writing final server update
[2026-03-13 10:54:42] 2026-03-13 14:53:59,254 | INFO     | total number of processed events: 400 (read)
[2026-03-13 10:54:42] 2026-03-13 14:53:59,259 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7052862499/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 10:54:42] 2026-03-13 14:53:59,260 | INFO     | extracted standard info from prmon json
[2026-03-13 10:54:42] 2026-03-13 14:53:59,260 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 10:54:42] 2026-03-13 14:53:59,260 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 10:54:42] 2026-03-13 14:53:59,261 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 10:54:42] 2026-03-13 14:53:59,261 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 10:54:42] 2026-03-13 14:53:59,267 | INFO     | fitting pss+swap vs Time
[2026-03-13 10:54:42] 2026-03-13 14:53:59,268 | INFO     | sum of square deviations: 3124858590.0
[2026-03-13 10:54:42] 2026-03-13 14:53:59,270 | INFO     | sum of deviations: 38960212427.0
[2026-03-13 10:54:42] 2026-03-13 14:53:59,270 | INFO     | mean x: 1773407036.5
[2026-03-13 10:54:42] 2026-03-13 14:53:59,270 | INFO     | mean y: 2465113.462962963
[2026-03-13 10:54:42] 2026-03-13 14:53:59,270 | INFO     | intersect: -22108076170.767292
[2026-03-13 10:54:42] 2026-03-13 14:53:59,271 | INFO     | chi2: 1.3239407522964928
[2026-03-13 10:54:42] 2026-03-13 14:53:59,271 | INFO     | sum of square deviations: 2912836010.0
[2026-03-13 10:54:42] 2026-03-13 14:53:59,273 | INFO     | sum of deviations: 37843253748.99999
[2026-03-13 10:54:42] 2026-03-13 14:53:59,273 | INFO     | mean x: 1773406884.0
[2026-03-13 10:54:42] 2026-03-13 14:53:59,273 | INFO     | mean y: 2464309.924170616
[2026-03-13 10:54:42] 2026-03-13 14:53:59,274 | INFO     | intersect: -23037448160.615284
[2026-03-13 10:54:42] 2026-03-13 14:53:59,274 | INFO     | chi2: 1.3242502619841392
[2026-03-13 10:54:42] 2026-03-13 14:53:59,274 | INFO     | current chi2=1.3242502619841392 (change=-0.02337791076447744 %)
[2026-03-13 10:54:42] 2026-03-13 14:53:59,274 | INFO     | right removable region: 210
[2026-03-13 10:54:42] 2026-03-13 14:53:59,275 | INFO     | sum of square deviations: 2912836010.0
[2026-03-13 10:54:42] 2026-03-13 14:53:59,277 | INFO     | sum of deviations: 7000651763.0
[2026-03-13 10:54:42] 2026-03-13 14:53:59,277 | INFO     | mean x: 1773407189.0
[2026-03-13 10:54:42] 2026-03-13 14:53:59,278 | INFO     | mean y: 2487889.644549763
[2026-03-13 10:54:42] 2026-03-13 14:53:59,278 | INFO     | intersect: -4259683451.813744
[2026-03-13 10:54:42] 2026-03-13 14:53:59,278 | INFO     | chi2: 0.02296666079131131
[2026-03-13 10:54:42] 2026-03-13 14:53:59,279 | INFO     | current chi2=0.02296666079131131 (change=98.26528031926856 %)
[2026-03-13 10:54:42] 2026-03-13 14:53:59,279 | INFO     | sum of square deviations: 2710627567.5
[2026-03-13 10:54:42] 2026-03-13 14:53:59,281 | INFO     | sum of deviations: 3124593758.5
[2026-03-13 10:54:42] 2026-03-13 14:53:59,281 | INFO     | mean x: 1773407341.5
[2026-03-13 10:54:42] 2026-03-13 14:53:59,281 | INFO     | mean y: 2490784.2475728155
[2026-03-13 10:54:42] 2026-03-13 14:53:59,281 | INFO     | intersect: -2041750769.615019
[2026-03-13 10:54:42] 2026-03-13 14:53:59,282 | INFO     | chi2: 0.002182839380725407
[2026-03-13 10:54:42] 2026-03-13 14:53:59,282 | INFO     | current chi2=0.002182839380725407 (change=90.49561710097963 %)
[2026-03-13 10:54:42] 2026-03-13 14:53:59,283 | INFO     | sum of square deviations: 2518000700.0
[2026-03-13 10:54:42] 2026-03-13 14:53:59,284 | INFO     | sum of deviations: 2207549312.9999995
[2026-03-13 10:54:42] 2026-03-13 14:53:59,284 | INFO     | mean x: 1773407494.0
[2026-03-13 10:54:42] 2026-03-13 14:53:59,285 | INFO     | mean y: 2491508.4925373136
[2026-03-13 10:54:42] 2026-03-13 14:53:59,285 | INFO     | intersect: -1552267588.6946678
[2026-03-13 10:54:42] 2026-03-13 14:53:59,285 | INFO     | chi2: 0.0017193548050060822
[2026-03-13 10:54:42] 2026-03-13 14:53:59,286 | INFO     | current chi2=0.0017193548050060822 (change=21.233104909684126 %)
[2026-03-13 10:54:42] 2026-03-13 14:53:59,286 | INFO     | left removable region: 30
[2026-03-13 10:54:42] 2026-03-13 14:53:59,286 | INFO     | sum of square deviations: 1808350185.0
[2026-03-13 10:54:42] 2026-03-13 14:53:59,288 | INFO     | sum of deviations: 1493107583.5000005
[2026-03-13 10:54:42] 2026-03-13 14:53:59,288 | INFO     | mean x: 1773407768.5
[2026-03-13 10:54:42] 2026-03-13 14:53:59,288 | INFO     | mean y: 2491657.783333333
[2026-03-13 10:54:42] 2026-03-13 14:53:59,288 | INFO     | intersect: -1461764883.7587926
[2026-03-13 10:54:42] 2026-03-13 14:53:59,289 | INFO     | chi2: 0.0015692685425110634
[2026-03-13 10:54:42] 2026-03-13 14:53:59,289 | INFO     | current memory leak: 0.83 B/s (using 180 data points, chi2=0.00)
[2026-03-13 10:54:42] 2026-03-13 14:53:59,290 | INFO     | could have reported an average CPU frequency of 2483 MHz (11 samples)
[2026-03-13 10:54:42] 2026-03-13 14:53:59,290 | INFO     | ..............................
[2026-03-13 10:54:42] 2026-03-13 14:53:59,290 | INFO     | . Timing measurements:
[2026-03-13 10:54:42] 2026-03-13 14:53:59,290 | INFO     | . get job = 0 s
[2026-03-13 10:54:42] 2026-03-13 14:53:59,290 | INFO     | . initial setup = 1 s
[2026-03-13 10:54:42] 2026-03-13 14:53:59,291 | INFO     | . payload setup = 6 s
[2026-03-13 10:54:42] 2026-03-13 14:53:59,291 | INFO     | . stage-in = 0 s
[2026-03-13 10:54:42] 2026-03-13 14:53:59,291 | INFO     | . payload execution = 13159 s
[2026-03-13 10:54:42] 2026-03-13 14:53:59,291 | INFO     | . stage-out = 1 s
[2026-03-13 10:54:42] 2026-03-13 14:53:59,291 | INFO     | . log creation = 0 s
[2026-03-13 10:54:42] 2026-03-13 14:53:59,291 | INFO     | ..............................
[2026-03-13 10:54:42] 2026-03-13 14:53:59,429 | INFO     | 
[2026-03-13 10:54:42] 2026-03-13 14:53:59,429 | INFO     | job summary report
[2026-03-13 10:54:42] 2026-03-13 14:53:59,430 | INFO     | --------------------------------------------------
[2026-03-13 10:54:42] 2026-03-13 14:53:59,430 | INFO     | PanDA job id: 7052862499
[2026-03-13 10:54:42] 2026-03-13 14:53:59,430 | INFO     | task id: 48967085
[2026-03-13 10:54:42] 2026-03-13 14:53:59,430 | INFO     | errors: (none)
[2026-03-13 10:54:42] 2026-03-13 14:53:59,430 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 10:54:42] 2026-03-13 14:53:59,430 | INFO     | pilot state: finished 
[2026-03-13 10:54:42] 2026-03-13 14:53:59,431 | INFO     | transexitcode: 0
[2026-03-13 10:54:42] 2026-03-13 14:53:59,431 | INFO     | exeerrorcode: 0
[2026-03-13 10:54:42] 2026-03-13 14:53:59,431 | INFO     | exeerrordiag: 
[2026-03-13 10:54:42] 2026-03-13 14:53:59,431 | INFO     | exitcode: 0
[2026-03-13 10:54:42] 2026-03-13 14:53:59,431 | INFO     | exitmsg: OK
[2026-03-13 10:54:42] 2026-03-13 14:53:59,431 | INFO     | cpuconsumptiontime: 101016 s
[2026-03-13 10:54:42] 2026-03-13 14:53:59,431 | INFO     | nevents: 400
[2026-03-13 10:54:42] 2026-03-13 14:53:59,432 | INFO     | neventsw: 0
[2026-03-13 10:54:42] 2026-03-13 14:53:59,432 | INFO     | pid: 24747
[2026-03-13 10:54:42] 2026-03-13 14:53:59,432 | INFO     | pgrp: 24747
[2026-03-13 10:54:42] 2026-03-13 14:53:59,432 | INFO     | corecount: 8
[2026-03-13 10:54:42] 2026-03-13 14:53:59,432 | INFO     | event service: False
[2026-03-13 10:54:42] 2026-03-13 14:53:59,432 | INFO     | sizes: {0: 2280242, 11: 2280242, 13169: 2310317, 13171: 2319371, 13173: 2319509}
[2026-03-13 10:54:42] 2026-03-13 14:53:59,432 | INFO     | --------------------------------------------------
[2026-03-13 10:54:42] 2026-03-13 14:53:59,433 | INFO     | 
[2026-03-13 10:54:42] 2026-03-13 14:53:59,433 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-13 10:54:42] 2026-03-13 14:53:59,451 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 10:54:42] 2026-03-13 14:53:59,452 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 10:54:42] 2026-03-13 14:53:59,452 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 10:54:42] 2026-03-13 14:53:59,452 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 10:54:42] 2026-03-13 14:53:59,452 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 10:54:42] 2026-03-13 14:53:59,453 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 10:54:42] 2026-03-13 14:53:59,453 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 10:54:42] 2026-03-13 14:53:59,453 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 10:54:42] 2026-03-13 14:53:59,453 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 10:54:42] 2026-03-13 14:53:59,453 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 10:54:42] 2026-03-13 14:53:59,454 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 10:54:42] 2026-03-13 14:53:59,454 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 10:54:42] 2026-03-13 14:53:59,454 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 10:54:42] 2026-03-13 14:53:59,454 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 10:54:42] 2026-03-13 14:53:59,454 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 10:54:42] 2026-03-13 14:53:59,454 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 10:54:42] 2026-03-13 14:53:59,455 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 10:54:42] 2026-03-13 14:53:59,455 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 10:54:42] 2026-03-13 14:53:59,455 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 10:54:42] 2026-03-13 14:53:59,455 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 10:54:42] 2026-03-13 14:53:59,455 | INFO     | job 7052862499 has completed (purged errors)
[2026-03-13 10:54:42] 2026-03-13 14:53:59,456 | INFO     | overall cleanup function is called
[2026-03-13 10:54:42] 2026-03-13 14:54:00,461 | INFO     | --- collectZombieJob: --- 10, [24747]
[2026-03-13 10:54:42] 2026-03-13 14:54:00,461 | INFO     | zombie collector waiting for pid 24747
[2026-03-13 10:54:42] 2026-03-13 14:54:00,461 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 10:54:42] 2026-03-13 14:54:00,461 | INFO     | collected zombie processes
[2026-03-13 10:54:42] 2026-03-13 14:54:00,462 | INFO     | will attempt to kill all subprocesses of pid=24747
[2026-03-13 10:54:42] 2026-03-13 14:54:00,619 | INFO     | process IDs to be killed: [24747] (in reverse order)
[2026-03-13 10:54:42] 2026-03-13 14:54:00,678 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 10:54:42] 2026-03-13 14:54:00,678 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 10:54:42] 2026-03-13 14:54:00,684 | INFO     | did not find any defunct processes belonging to 24747
[2026-03-13 10:54:42] 2026-03-13 14:54:00,689 | INFO     | did not find any defunct processes belonging to 24747
[2026-03-13 10:54:42] 2026-03-13 14:54:00,689 | INFO     | ready for new job
[2026-03-13 10:54:42] 2026-03-13 14:54:00,689 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 10:54:42] 2026-03-13 14:54:00,691 | INFO     | **************************************
[2026-03-13 10:54:42] 2026-03-13 14:54:00,691 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 10:54:42] 2026-03-13 14:54:00,691 | INFO     | **************************************
[2026-03-13 10:54:42] 2026-03-13 14:54:00,692 | INFO     | 
[2026-03-13 10:54:42] 2026-03-13 14:54:00,693 | INFO     | architecture information:
[2026-03-13 10:54:42] 2026-03-13 14:54:00,693 | INFO     | executing command: cat /etc/os-release
[2026-03-13 10:54:42] 2026-03-13 14:54:00,707 | INFO     | cat /etc/os-release:
[2026-03-13 10:54:42] NAME="CentOS Linux"
[2026-03-13 10:54:42] VERSION="7 (Core)"
[2026-03-13 10:54:42] ID="centos"
[2026-03-13 10:54:42] ID_LIKE="rhel fedora"
[2026-03-13 10:54:42] VERSION_ID="7"
[2026-03-13 10:54:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 10:54:42] ANSI_COLOR="0;31"
[2026-03-13 10:54:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 10:54:42] HOME_URL="https://www.centos.org/"
[2026-03-13 10:54:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 10:54:42] 
[2026-03-13 10:54:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 10:54:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 10:54:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 10:54:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 10:54:42] 
[2026-03-13 10:54:42] 2026-03-13 14:54:00,707 | INFO     | **************************************
[2026-03-13 10:54:42] 2026-03-13 14:54:01,210 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-13 10:54:42] 2026-03-13 14:54:01,226 | INFO     | sufficient remaining disk space (27564965888 B)
[2026-03-13 10:54:42] 2026-03-13 14:54:01,226 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 10:54:42] 2026-03-13 14:54:01,227 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 10:54:42] 2026-03-13 14:54:01,227 | INFO     | update_server=False
[2026-03-13 10:54:42] 2026-03-13 14:54:01,227 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 10:54:42] 2026-03-13 14:54:01,227 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 10:54:42] 2026-03-13 14:54:01,254 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 10:54:42] 2026-03-13 14:54:01,400 | INFO     | all payload control threads have been joined
[2026-03-13 10:54:42] 2026-03-13 14:54:01,538 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 10:54:42] 2026-03-13 14:54:01,539 | INFO     | aborting loop
[2026-03-13 10:54:42] 2026-03-13 14:54:01,899 | INFO     | all data control threads have been joined
[2026-03-13 10:54:42] 2026-03-13 14:54:02,232 | INFO     | [job] retrieve thread has finished
[2026-03-13 10:54:42] 2026-03-13 14:54:02,233 | INFO     | [job] queue monitor thread has finished
[2026-03-13 10:54:42] 2026-03-13 14:54:02,406 | INFO     | [payload] control thread has finished
[2026-03-13 10:54:42] 2026-03-13 14:54:02,544 | INFO     | [job] job monitor thread has finished
[2026-03-13 10:54:42] 2026-03-13 14:54:02,725 | INFO     | all job control threads have been joined
[2026-03-13 10:54:42] 2026-03-13 14:54:02,904 | INFO     | [data] control thread has finished
[2026-03-13 10:54:42] 2026-03-13 14:54:03,077 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 10:54:42] 2026-03-13 14:54:03,102 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 10:54:42] 2026-03-13 14:54:03,259 | INFO     | [data] copytool_out thread has finished
[2026-03-13 10:54:42] 2026-03-13 14:54:03,327 | INFO     | [payload] failed_post thread has finished
[2026-03-13 10:54:42] 2026-03-13 14:54:03,441 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 10:54:42] 2026-03-13 14:54:03,520 | INFO     | [job] validate thread has finished
[2026-03-13 10:54:42] 2026-03-13 14:54:03,531 | INFO     | [data] copytool_in thread has finished
[2026-03-13 10:54:42] 2026-03-13 14:54:03,594 | INFO     | [payload] validate_post thread has finished
[2026-03-13 10:54:42] 2026-03-13 14:54:03,731 | INFO     | [job] control thread has finished
[2026-03-13 10:54:42] 2026-03-13 14:54:04,359 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 10:54:42] 2026-03-13 14:54:08,366 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 10:54:42] 2026-03-13 14:54:11,405 | INFO     | job.realtimelogging is not enabled
[2026-03-13 10:54:42] 2026-03-13 14:54:12,411 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 10:54:42] 2026-03-13 14:54:32,297 | INFO     | PID=17590 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-13 10:54:42] 2026-03-13 14:54:32,297 | INFO     | .. there are 3 such processes running
[2026-03-13 10:54:42] 2026-03-13 14:54:32,298 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 10:54:42] 2026-03-13 14:54:32,298 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 10:54:42] 2026-03-13 14:54:32,298 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 10:54:42] 2026-03-13 14:54:36,617 | INFO     | [monitor] cgroup control has ended
[2026-03-13 10:54:42] 2026-03-13 14:54:37,260 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139640784910144)>', '<ExcThread(monitor, started 139639981598464)>']
[2026-03-13 10:54:42] 2026-03-13 14:54:37,324 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 10:54:42] 2026-03-13 14:54:37,324 | INFO     | [monitor] control thread has ended
[2026-03-13 10:54:42] 2026-03-13 14:54:42,284 | INFO     | all workflow threads have been joined
[2026-03-13 10:54:42] 2026-03-13 14:54:42,285 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 10:54:42] 2026-03-13 14:54:42,285 | INFO     | traces error code: 0
[2026-03-13 10:54:42] 2026-03-13 14:54:42,285 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 10:54:42] 2026-03-13 14:54:42,401 [wrapper] ==== pilot stdout END ====
[2026-03-13 10:54:42] 2026-03-13 14:54:42,403 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 10:54:42] 2026-03-13 14:54:42,405 [wrapper] pilotpid: 17590
[2026-03-13 10:54:42] 2026-03-13 14:54:42,407 [wrapper] Pilot exit status: 0
[2026-03-13 10:54:42] 2026-03-13 14:54:42,416 [wrapper] pandaids: 7052862499 7052862499
[2026-03-13 10:54:42] 2026-03-13 14:54:42,443 [wrapper] cleanup supervisor_pilot  2969 17591
[2026-03-13 10:54:42] 2026-03-13 14:54:42,445 [wrapper] Test setup, not cleaning
[2026-03-13 10:54:42] 2026-03-13 14:54:42,447 [wrapper] apfmon messages muted
[2026-03-13 10:54:42] 2026-03-13 14:54:42,449 [wrapper] ==== wrapper stdout END ====
[2026-03-13 10:54:42] 2026-03-13 14:54:42,451 [wrapper] ==== wrapper stderr END ====
[2026-03-13 10:54:42]  *** Error codes and diagnostics ***
[2026-03-13 10:54:42]     "exeErrorCode": 0,
[2026-03-13 10:54:42]     "exeErrorDiag": "",
[2026-03-13 10:54:42]     "pilotErrorCode": 0,
[2026-03-13 10:54:42]     "pilotErrorDiag": "",
[2026-03-13 10:54:42]  *** Listing of results directory ***
[2026-03-13 10:54:42] total 622800
[2026-03-13 10:54:42] drwx------ 5 boincer umatlas      4096 Mar 10 12:00 pilot3
[2026-03-13 10:54:42] -rw-r--r-- 1 boincer umatlas    585013 Mar 12 23:13 pilot3.tar.gz
[2026-03-13 10:54:42] -rwx------ 1 boincer umatlas     36322 Mar 12 23:16 runpilot2-wrapper.sh
[2026-03-13 10:54:42] -rw-r--r-- 1 boincer umatlas      5111 Mar 12 23:18 queuedata.json
[2026-03-13 10:54:42] -rw-r--r-- 1 boincer umatlas       100 Mar 13 05:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 10:54:42] -rwxr-xr-x 1 boincer umatlas      7986 Mar 13 05:25 run_atlas
[2026-03-13 10:54:42] -rw-r--r-- 1 boincer umatlas       105 Mar 13 05:25 job.xml
[2026-03-13 10:54:42] -rw-r--r-- 3 boincer umatlas 213149050 Mar 13 05:25 EVNT.48967083._000700.pool.root.1
[2026-03-13 10:54:42] -rw-r--r-- 3 boincer umatlas 213149050 Mar 13 05:25 ATLAS.root_0
[2026-03-13 10:54:42] -rw-r--r-- 2 boincer umatlas     15845 Mar 13 05:25 start_atlas.sh
[2026-03-13 10:54:42] drwxrwx--x 2 boincer umatlas      4096 Mar 13 05:25 shared
[2026-03-13 10:54:42] -rw-r--r-- 2 boincer umatlas    597523 Mar 13 05:25 input.tar.gz
[2026-03-13 10:54:42] -rw-r--r-- 1 boincer umatlas         0 Mar 13 05:25 boinc_lockfile
[2026-03-13 10:54:42] -rw-r--r-- 1 boincer umatlas      2563 Mar 13 07:14 pandaJob.out
[2026-03-13 10:54:42] -rw------- 1 boincer umatlas        57 Mar 13 07:14 setup.sh.local
[2026-03-13 10:54:42] -rw------- 1 boincer umatlas   1006495 Mar 13 07:14 agis_schedconf.cvmfs.json
[2026-03-13 10:54:42] -rw------- 1 boincer umatlas       433 Mar 13 07:14 workernode_map.json
[2026-03-13 10:54:42] -rw-r--r-- 1 boincer umatlas       531 Mar 13 10:53 boinc_task_state.xml
[2026-03-13 10:54:42] -rw------- 1 boincer umatlas 202929533 Mar 13 10:53 HITS.48967085._017250.pool.root.1
[2026-03-13 10:54:42] -rw------- 1 boincer umatlas      1050 Mar 13 10:53 memory_monitor_summary.json
[2026-03-13 10:54:42] -rw------- 1 boincer umatlas   1511578 Mar 13 10:53 agis_ddmendpoints.agis.ALL.json
[2026-03-13 10:54:42] -rw------- 1 boincer umatlas    438127 Mar 13 10:53 log.48967085._017250.job.log.tgz.1
[2026-03-13 10:54:42] -rw------- 1 boincer umatlas      6414 Mar 13 10:53 heartbeat.json
[2026-03-13 10:54:42] -rw-r--r-- 1 boincer umatlas      5952 Mar 13 10:54 init_data.xml
[2026-03-13 10:54:42] -rw-r--r-- 1 boincer umatlas        29 Mar 13 10:54 wrapper_checkpoint.txt
[2026-03-13 10:54:42] -rw-r--r-- 1 boincer umatlas      8192 Mar 13 10:54 boinc_mmap_file
[2026-03-13 10:54:42] -rw------- 1 boincer umatlas        96 Mar 13 10:54 pilot_heartbeat.json
[2026-03-13 10:54:42] -rw------- 1 boincer umatlas      4889 Mar 13 10:54 pilotlog.txt
[2026-03-13 10:54:42] -rw------- 1 boincer umatlas   1852379 Mar 13 10:54 log.48967085._017250.job.log.1
[2026-03-13 10:54:42] -rw------- 1 boincer umatlas       357 Mar 13 10:54 output.list
[2026-03-13 10:54:42] -rw-r--r-- 1 boincer umatlas       620 Mar 13 10:54 runtime_log
[2026-03-13 10:54:42] -rw------- 1 boincer umatlas   2304000 Mar 13 10:54 result.tar.gz
[2026-03-13 10:54:42] -rw-r--r-- 1 boincer umatlas      9427 Mar 13 10:54 runtime_log.err
[2026-03-13 10:54:42] -rw------- 1 boincer umatlas       788 Mar 13 10:54 KhkMDmtB8K9n9Rq4apOajLDm4fhM0noT9bVooX4SDmPzlLDm9GfMYn.diag
[2026-03-13 10:54:42] -rw-r--r-- 1 boincer umatlas     23249 Mar 13 10:54 stderr.txt
[2026-03-13 10:54:42] HITS file was successfully produced:
[2026-03-13 10:54:42] -rw------- 1 boincer umatlas 202929533 Mar 13 10:53 shared/HITS.pool.root.1
[2026-03-13 10:54:42]  *** Contents of shared directory: ***
[2026-03-13 10:54:42] total 409188
[2026-03-13 10:54:42] -rw-r--r-- 3 boincer umatlas 213149050 Mar 13 05:25 ATLAS.root_0
[2026-03-13 10:54:42] -rw-r--r-- 2 boincer umatlas     15845 Mar 13 05:25 start_atlas.sh
[2026-03-13 10:54:42] -rw-r--r-- 2 boincer umatlas    597523 Mar 13 05:25 input.tar.gz
[2026-03-13 10:54:42] -rw------- 1 boincer umatlas 202929533 Mar 13 10:53 HITS.pool.root.1
[2026-03-13 10:54:42] -rw------- 1 boincer umatlas   2304000 Mar 13 10:54 result.tar.gz
10:54:43 (6440): run_atlas exited; CPU time 101212.541713
10:54:43 (6440): called boinc_finish(0)

</stderr_txt>
]]>

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