Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
05:18:53 (604925): wrapper (7.7.26015): starting
05:18:53 (604925): wrapper: running run_atlas (--nthreads 4)
[2026-03-13 05:18:53] Arguments: --nthreads 4
[2026-03-13 05:18:53] Threads: 4
[2026-03-13 05:18:53] Checking for CVMFS
[2026-03-13 05:18:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 05:18:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 05:18:54] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 05:18:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 05:18:54] 2.13.3.0 196114 10036 51612 157234 3 49 2596891 4096000 2748 130560 0 12329412 99.994 357883 923 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2026-03-13 05:18:54] CVMFS is ok
[2026-03-13 05:18:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 05:18:54] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-13 05:18:54] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-13 05:18:54] Further information can be found at the LHC@home message board.
[2026-03-13 05:18:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 05:18:54] Checking for apptainer binary...
[2026-03-13 05:18:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 05:18:54] Running /usr/bin/apptainer --version
[2026-03-13 05:18:54] apptainer version 1.4.5
[2026-03-13 05:18:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 05:18:54] Taichi-Ubuntu
[2026-03-13 05:18:54] apptainer works
[2026-03-13 05:18:54] Set ATHENA_PROC_NUMBER=4
[2026-03-13 05:18:54] Set ATHENA_CORE_NUMBER=4
[2026-03-13 05:18:54] Starting ATLAS job with PandaID=7052859307
[2026-03-13 05:18:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 07:22:28]  *** The last 200 lines of the pilot log: ***
[2026-03-13 07:22:28] 2026-03-13 11:21:39,814 | INFO     | this job has now completed (state=finished)
[2026-03-13 07:22:28] 2026-03-13 11:21:39,814 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-13 07:22:28] 2026-03-13 11:21:39,814 | INFO     | log transfer has been attempted: DONE
[2026-03-13 07:22:28] 2026-03-13 11:21:39,814 | INFO     | job 7052859307 has finished - writing final server update
[2026-03-13 07:22:28] 2026-03-13 11:21:39,815 | INFO     | total number of processed events: 400 (read)
[2026-03-13 07:22:28] 2026-03-13 11:21:39,822 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/13/PanDA_Pilot-7052859307/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 07:22:28] 2026-03-13 11:21:39,822 | INFO     | extracted standard info from prmon json
[2026-03-13 07:22:28] 2026-03-13 11:21:39,822 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 07:22:28] 2026-03-13 11:21:39,822 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 07:22:28] 2026-03-13 11:21:39,823 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 07:22:28] 2026-03-13 11:21:39,823 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 07:22:28] 2026-03-13 11:21:39,825 | INFO     | fitting pss+swap vs Time
[2026-03-13 07:22:28] 2026-03-13 11:21:39,825 | INFO     | sum of square deviations: 535786790.0
[2026-03-13 07:22:28] 2026-03-13 11:21:39,825 | INFO     | sum of deviations: -15248366389.500002
[2026-03-13 07:22:28] 2026-03-13 11:21:39,825 | INFO     | mean x: 1773397203.5
[2026-03-13 07:22:28] 2026-03-13 11:21:39,825 | INFO     | mean y: 2405994.3583333334
[2026-03-13 07:22:28] 2026-03-13 11:21:39,826 | INFO     | intersect: 50472874504.94385
[2026-03-13 07:22:28] 2026-03-13 11:21:39,826 | INFO     | chi2: 1.3385093578293905
[2026-03-13 07:22:28] 2026-03-13 11:21:39,826 | INFO     | sum of square deviations: 471562330.0
[2026-03-13 07:22:28] 2026-03-13 11:21:39,826 | INFO     | sum of deviations: -13671043853.0
[2026-03-13 07:22:28] 2026-03-13 11:21:39,827 | INFO     | mean x: 1773397051.0
[2026-03-13 07:22:28] 2026-03-13 11:21:39,827 | INFO     | mean y: 2409741.886956522
[2026-03-13 07:22:28] 2026-03-13 11:21:39,827 | INFO     | intersect: 51414889727.304535
[2026-03-13 07:22:28] 2026-03-13 11:21:39,827 | INFO     | chi2: 1.3369887825755697
[2026-03-13 07:22:28] 2026-03-13 11:21:39,827 | INFO     | current chi2=1.3369887825755697 (change=0.11360213844799898 %)
[2026-03-13 07:22:28] 2026-03-13 11:21:39,827 | INFO     | right removable region: 114
[2026-03-13 07:22:28] 2026-03-13 11:21:39,827 | INFO     | sum of square deviations: 471562330.0
[2026-03-13 07:22:28] 2026-03-13 11:21:39,828 | INFO     | sum of deviations: -26784374832.0
[2026-03-13 07:22:28] 2026-03-13 11:21:39,828 | INFO     | mean x: 1773397356.0
[2026-03-13 07:22:28] 2026-03-13 11:21:39,828 | INFO     | mean y: 2432469.6782608693
[2026-03-13 07:22:28] 2026-03-13 11:21:39,828 | INFO     | intersect: 100730027715.00192
[2026-03-13 07:22:28] 2026-03-13 11:21:39,828 | INFO     | chi2: 0.07115920432146237
[2026-03-13 07:22:28] 2026-03-13 11:21:39,828 | INFO     | current chi2=0.07115920432146237 (change=94.68369765924845 %)
[2026-03-13 07:22:28] 2026-03-13 11:21:39,828 | INFO     | sum of square deviations: 412686807.5
[2026-03-13 07:22:28] 2026-03-13 11:21:39,829 | INFO     | sum of deviations: -22109135606.0
[2026-03-13 07:22:28] 2026-03-13 11:21:39,829 | INFO     | mean x: 1773397508.5
[2026-03-13 07:22:28] 2026-03-13 11:21:39,829 | INFO     | mean y: 2420338.7636363637
[2026-03-13 07:22:28] 2026-03-13 11:21:39,829 | INFO     | intersect: 95009784970.28033
[2026-03-13 07:22:28] 2026-03-13 11:21:39,829 | INFO     | chi2: 0.06543593399060306
[2026-03-13 07:22:28] 2026-03-13 11:21:39,829 | INFO     | current chi2=0.06543593399060306 (change=8.04290939651937 %)
[2026-03-13 07:22:28] 2026-03-13 11:21:39,830 | INFO     | left removable region: 20
[2026-03-13 07:22:28] 2026-03-13 11:21:39,830 | INFO     | sum of square deviations: 257521107.5
[2026-03-13 07:22:28] 2026-03-13 11:21:39,830 | INFO     | sum of deviations: -13086726957.5
[2026-03-13 07:22:28] 2026-03-13 11:21:39,830 | INFO     | mean x: 1773397630.5
[2026-03-13 07:22:28] 2026-03-13 11:21:39,830 | INFO     | mean y: 2403173.1808510637
[2026-03-13 07:22:28] 2026-03-13 11:21:39,830 | INFO     | intersect: 90123056981.8438
[2026-03-13 07:22:28] 2026-03-13 11:21:39,830 | INFO     | chi2: 0.03945520989061642
[2026-03-13 07:22:28] 2026-03-13 11:21:39,831 | INFO     | current memory leak: -50.82 B/s (using 94 data points, chi2=0.04)
[2026-03-13 07:22:28] 2026-03-13 11:21:39,831 | INFO     | could have reported an average CPU frequency of 3371 MHz (8 samples)
[2026-03-13 07:22:28] 2026-03-13 11:21:39,831 | INFO     | ..............................
[2026-03-13 07:22:28] 2026-03-13 11:21:39,831 | INFO     | . Timing measurements:
[2026-03-13 07:22:28] 2026-03-13 11:21:39,831 | INFO     | . get job = 0 s
[2026-03-13 07:22:28] 2026-03-13 11:21:39,831 | INFO     | . initial setup = 7 s
[2026-03-13 07:22:28] 2026-03-13 11:21:39,831 | INFO     | . payload setup = 6 s
[2026-03-13 07:22:28] 2026-03-13 11:21:39,831 | INFO     | . stage-in = 0 s
[2026-03-13 07:22:28] 2026-03-13 11:21:39,831 | INFO     | . payload execution = 7324 s
[2026-03-13 07:22:28] 2026-03-13 11:21:39,831 | INFO     | . stage-out = 0 s
[2026-03-13 07:22:28] 2026-03-13 11:21:39,831 | INFO     | . log creation = 0 s
[2026-03-13 07:22:28] 2026-03-13 11:21:39,831 | INFO     | ..............................
[2026-03-13 07:22:28] 2026-03-13 11:21:39,896 | INFO     | 
[2026-03-13 07:22:28] 2026-03-13 11:21:39,897 | INFO     | job summary report
[2026-03-13 07:22:28] 2026-03-13 11:21:39,897 | INFO     | --------------------------------------------------
[2026-03-13 07:22:28] 2026-03-13 11:21:39,897 | INFO     | PanDA job id: 7052859307
[2026-03-13 07:22:28] 2026-03-13 11:21:39,897 | INFO     | task id: 48967085
[2026-03-13 07:22:28] 2026-03-13 11:21:39,897 | INFO     | errors: (none)
[2026-03-13 07:22:28] 2026-03-13 11:21:39,897 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 07:22:28] 2026-03-13 11:21:39,897 | INFO     | pilot state: finished 
[2026-03-13 07:22:28] 2026-03-13 11:21:39,897 | INFO     | transexitcode: 0
[2026-03-13 07:22:28] 2026-03-13 11:21:39,897 | INFO     | exeerrorcode: 0
[2026-03-13 07:22:28] 2026-03-13 11:21:39,897 | INFO     | exeerrordiag: 
[2026-03-13 07:22:28] 2026-03-13 11:21:39,897 | INFO     | exitcode: 0
[2026-03-13 07:22:28] 2026-03-13 11:21:39,897 | INFO     | exitmsg: OK
[2026-03-13 07:22:28] 2026-03-13 11:21:39,898 | INFO     | cpuconsumptiontime: 28417 s
[2026-03-13 07:22:28] 2026-03-13 11:21:39,898 | INFO     | nevents: 400
[2026-03-13 07:22:28] 2026-03-13 11:21:39,898 | INFO     | neventsw: 0
[2026-03-13 07:22:28] 2026-03-13 11:21:39,898 | INFO     | pid: 613815
[2026-03-13 07:22:28] 2026-03-13 11:21:39,898 | INFO     | pgrp: 613815
[2026-03-13 07:22:28] 2026-03-13 11:21:39,898 | INFO     | corecount: 4
[2026-03-13 07:22:28] 2026-03-13 11:21:39,898 | INFO     | event service: False
[2026-03-13 07:22:28] 2026-03-13 11:21:39,898 | INFO     | sizes: {0: 2280251, 11: 2280251, 7333: 2307732, 7334: 2307731, 7336: 2316871, 7337: 2317009}
[2026-03-13 07:22:28] 2026-03-13 11:21:39,898 | INFO     | --------------------------------------------------
[2026-03-13 07:22:28] 2026-03-13 11:21:39,898 | INFO     | 
[2026-03-13 07:22:28] 2026-03-13 11:21:39,898 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/13
[2026-03-13 07:22:28] 2026-03-13 11:21:39,922 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 07:22:28] 2026-03-13 11:21:39,922 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 07:22:28] 2026-03-13 11:21:39,922 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 07:22:28] 2026-03-13 11:21:39,922 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 07:22:28] 2026-03-13 11:21:39,922 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 07:22:28] 2026-03-13 11:21:39,922 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 07:22:28] 2026-03-13 11:21:39,922 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 07:22:28] 2026-03-13 11:21:39,923 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 07:22:28] 2026-03-13 11:21:39,923 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 07:22:28] 2026-03-13 11:21:39,923 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 07:22:28] 2026-03-13 11:21:39,923 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 07:22:28] 2026-03-13 11:21:39,923 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 07:22:28] 2026-03-13 11:21:39,923 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 07:22:28] 2026-03-13 11:21:39,923 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 07:22:28] 2026-03-13 11:21:39,923 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 07:22:28] 2026-03-13 11:21:39,923 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 07:22:28] 2026-03-13 11:21:39,923 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 07:22:28] 2026-03-13 11:21:39,923 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 07:22:28] 2026-03-13 11:21:39,923 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 07:22:28] 2026-03-13 11:21:39,924 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 07:22:28] 2026-03-13 11:21:39,924 | INFO     | job 7052859307 has completed (purged errors)
[2026-03-13 07:22:28] 2026-03-13 11:21:39,924 | INFO     | overall cleanup function is called
[2026-03-13 07:22:28] 2026-03-13 11:21:40,932 | INFO     | --- collectZombieJob: --- 10, [613815]
[2026-03-13 07:22:28] 2026-03-13 11:21:40,933 | INFO     | zombie collector waiting for pid 613815
[2026-03-13 07:22:28] 2026-03-13 11:21:40,933 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 07:22:28] 2026-03-13 11:21:40,933 | INFO     | collected zombie processes
[2026-03-13 07:22:28] 2026-03-13 11:21:40,933 | INFO     | will attempt to kill all subprocesses of pid=613815
[2026-03-13 07:22:28] 2026-03-13 11:21:41,122 | INFO     | process IDs to be killed: [613815] (in reverse order)
[2026-03-13 07:22:28] 2026-03-13 11:21:41,192 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 07:22:28] 2026-03-13 11:21:41,193 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 07:22:28] 2026-03-13 11:21:41,198 | INFO     | did not find any defunct processes belonging to 613815
[2026-03-13 07:22:28] 2026-03-13 11:21:41,204 | INFO     | did not find any defunct processes belonging to 613815
[2026-03-13 07:22:28] 2026-03-13 11:21:41,205 | INFO     | ready for new job
[2026-03-13 07:22:28] 2026-03-13 11:21:41,205 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 07:22:28] 2026-03-13 11:21:41,206 | INFO     | **************************************
[2026-03-13 07:22:28] 2026-03-13 11:21:41,206 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 07:22:28] 2026-03-13 11:21:41,206 | INFO     | **************************************
[2026-03-13 07:22:28] 2026-03-13 11:21:41,206 | INFO     | 
[2026-03-13 07:22:28] 2026-03-13 11:21:41,208 | INFO     | architecture information:
[2026-03-13 07:22:28] 2026-03-13 11:21:41,209 | INFO     | executing command: cat /etc/os-release
[2026-03-13 07:22:28] 2026-03-13 11:21:41,225 | INFO     | cat /etc/os-release:
[2026-03-13 07:22:28] NAME="CentOS Linux"
[2026-03-13 07:22:28] VERSION="7 (Core)"
[2026-03-13 07:22:28] ID="centos"
[2026-03-13 07:22:28] ID_LIKE="rhel fedora"
[2026-03-13 07:22:28] VERSION_ID="7"
[2026-03-13 07:22:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 07:22:28] ANSI_COLOR="0;31"
[2026-03-13 07:22:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 07:22:28] HOME_URL="https://www.centos.org/"
[2026-03-13 07:22:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 07:22:28] 
[2026-03-13 07:22:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 07:22:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 07:22:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 07:22:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 07:22:28] 
[2026-03-13 07:22:28] 2026-03-13 11:21:41,225 | INFO     | **************************************
[2026-03-13 07:22:28] 2026-03-13 11:21:41,728 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/13
[2026-03-13 07:22:28] 2026-03-13 11:21:41,750 | INFO     | sufficient remaining disk space (392673886208 B)
[2026-03-13 07:22:28] 2026-03-13 11:21:41,750 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 07:22:28] 2026-03-13 11:21:41,751 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 07:22:28] 2026-03-13 11:21:41,751 | INFO     | update_server=False
[2026-03-13 07:22:28] 2026-03-13 11:21:41,751 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 07:22:28] 2026-03-13 11:21:41,751 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 07:22:28] 2026-03-13 11:21:41,832 | WARNING  | process 613815 can no longer be monitored (due to stat problems) - aborting
[2026-03-13 07:22:28] 2026-03-13 11:21:41,941 | INFO     | job.realtimelogging is not enabled
[2026-03-13 07:22:28] 2026-03-13 11:21:41,954 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/13/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 07:22:28] 2026-03-13 11:21:42,066 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 07:22:28] 2026-03-13 11:21:42,139 | INFO     | number of running child processes to parent process 613815: 1
[2026-03-13 07:22:28] 2026-03-13 11:21:42,139 | INFO     | maximum number of monitored processes: 6
[2026-03-13 07:22:28] 2026-03-13 11:21:42,139 | INFO     | aborting job monitoring since job object (job id=7052859307) has expired
[2026-03-13 07:22:28] 2026-03-13 11:21:42,139 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 07:22:28] 2026-03-13 11:21:42,139 | INFO     | will abort loop
[2026-03-13 07:22:28] 2026-03-13 11:21:42,757 | INFO     | [job] retrieve thread has finished
[2026-03-13 07:22:28] 2026-03-13 11:21:42,757 | INFO     | [job] queue monitor thread has finished
[2026-03-13 07:22:28] 2026-03-13 11:21:42,824 | INFO     | all data control threads have been joined
[2026-03-13 07:22:28] 2026-03-13 11:21:42,831 | INFO     | all payload control threads have been joined
[2026-03-13 07:22:28] 2026-03-13 11:21:42,946 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 07:22:28] 2026-03-13 11:21:43,145 | INFO     | [job] job monitor thread has finished
[2026-03-13 07:22:28] 2026-03-13 11:21:43,156 | INFO     | [payload] validate_post thread has finished
[2026-03-13 07:22:28] 2026-03-13 11:21:43,244 | INFO     | all job control threads have been joined
[2026-03-13 07:22:28] 2026-03-13 11:21:43,464 | INFO     | [job] validate thread has finished
[2026-03-13 07:22:28] 2026-03-13 11:21:43,584 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 07:22:28] 2026-03-13 11:21:43,693 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 07:22:28] 2026-03-13 11:21:43,829 | INFO     | [data] control thread has finished
[2026-03-13 07:22:28] 2026-03-13 11:21:43,836 | INFO     | [payload] control thread has finished
[2026-03-13 07:22:28] 2026-03-13 11:21:43,840 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 07:22:28] 2026-03-13 11:21:44,051 | INFO     | [payload] failed_post thread has finished
[2026-03-13 07:22:28] 2026-03-13 11:21:44,071 | INFO     | [data] copytool_out thread has finished
[2026-03-13 07:22:28] 2026-03-13 11:21:44,161 | INFO     | [data] copytool_in thread has finished
[2026-03-13 07:22:28] 2026-03-13 11:21:44,250 | INFO     | [job] control thread has finished
[2026-03-13 07:22:28] 2026-03-13 11:21:45,145 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 07:22:28] 2026-03-13 11:21:49,150 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 07:22:28] 2026-03-13 11:22:11,607 | INFO     | PID=609180 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-13 07:22:28] 2026-03-13 11:22:11,607 | INFO     | .. there are 4 such processes running
[2026-03-13 07:22:28] 2026-03-13 11:22:11,608 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 07:22:28] 2026-03-13 11:22:11,608 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 07:22:28] 2026-03-13 11:22:11,608 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 07:22:28] 2026-03-13 11:22:22,244 | INFO     | [monitor] cgroup control has ended
[2026-03-13 07:22:28] 2026-03-13 11:22:22,752 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125889806014272)>', '<ExcThread(monitor, started 125889140467456)>']
[2026-03-13 07:22:28] 2026-03-13 11:22:23,669 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 07:22:28] 2026-03-13 11:22:23,669 | INFO     | [monitor] control thread has ended
[2026-03-13 07:22:28] 2026-03-13 11:22:27,776 | INFO     | all workflow threads have been joined
[2026-03-13 07:22:28] 2026-03-13 11:22:27,777 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 07:22:28] 2026-03-13 11:22:27,777 | INFO     | traces error code: 0
[2026-03-13 07:22:28] 2026-03-13 11:22:27,777 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 07:22:28] 2026-03-13 11:22:27,942 [wrapper] ==== pilot stdout END ====
[2026-03-13 07:22:28] 2026-03-13 11:22:27,946 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 07:22:28] 2026-03-13 11:22:27,949 [wrapper] pilotpid: 609180
[2026-03-13 07:22:28] 2026-03-13 11:22:27,952 [wrapper] Pilot exit status: 0
[2026-03-13 07:22:28] 2026-03-13 11:22:27,965 [wrapper] pandaids: 7052859307
[2026-03-13 07:22:28] 2026-03-13 11:22:28,020 [wrapper] cleanup supervisor_pilot  664261 609181
[2026-03-13 07:22:28] 2026-03-13 11:22:28,024 [wrapper] Test setup, not cleaning
[2026-03-13 07:22:28] 2026-03-13 11:22:28,027 [wrapper] apfmon messages muted
[2026-03-13 07:22:28] 2026-03-13 11:22:28,030 [wrapper] ==== wrapper stdout END ====
[2026-03-13 07:22:28] 2026-03-13 11:22:28,033 [wrapper] ==== wrapper stderr END ====
[2026-03-13 07:22:28]  *** Error codes and diagnostics ***
[2026-03-13 07:22:28]     "exeErrorCode": 0,
[2026-03-13 07:22:28]     "exeErrorDiag": "",
[2026-03-13 07:22:28]     "pilotErrorCode": 0,
[2026-03-13 07:22:28]     "pilotErrorDiag": "",
[2026-03-13 07:22:28]  *** Listing of results directory ***
[2026-03-13 07:22:28] total 406092
[2026-03-13 07:22:28] -rw-r--r-- 1 whitlerd whitlerd    585013 Mar 12 23:13 pilot3.tar.gz
[2026-03-13 07:22:28] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar 12 23:13 queuedata.json
[2026-03-13 07:22:28] -rwx------ 1 whitlerd whitlerd     36322 Mar 12 23:13 runpilot2-wrapper.sh
[2026-03-13 07:22:28] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar 13 05:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 07:22:28] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar 13 05:18 run_atlas
[2026-03-13 07:22:28] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar 13 05:18 job.xml
[2026-03-13 07:22:28] -rw-r--r-- 2 whitlerd whitlerd 216548334 Mar 13 05:18 EVNT.48967083._000668.pool.root.1
[2026-03-13 07:22:28] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 13 05:18 start_atlas.sh
[2026-03-13 07:22:28] drwxrwx--x 2 whitlerd whitlerd      4096 Mar 13 05:18 shared
[2026-03-13 07:22:28] -rw-r--r-- 2 whitlerd whitlerd    597514 Mar 13 05:18 input.tar.gz
[2026-03-13 07:22:28] -rw-rw-r-- 1 whitlerd whitlerd      9344 Mar 13 05:18 init_data.xml
[2026-03-13 07:22:28] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 13 05:18 boinc_setup_complete
[2026-03-13 07:22:28] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 13 05:18 boinc_lockfile
[2026-03-13 07:22:28] -rw-rw-r-- 1 whitlerd whitlerd      2560 Mar 13 05:18 pandaJob.out
[2026-03-13 07:22:28] -rw------- 1 whitlerd whitlerd   1006487 Mar 13 05:19 agis_schedconf.cvmfs.json
[2026-03-13 07:22:28] -rw------- 1 whitlerd whitlerd   1511578 Mar 13 05:19 agis_ddmendpoints.agis.ALL.json
[2026-03-13 07:22:28] -rw------- 1 whitlerd whitlerd       439 Mar 13 05:19 workernode_map.json
[2026-03-13 07:22:28] drwx------ 5 whitlerd whitlerd      4096 Mar 13 05:19 pilot3
[2026-03-13 07:22:28] -rw------- 1 whitlerd whitlerd 192613172 Mar 13 07:21 HITS.48967085._016672.pool.root.1
[2026-03-13 07:22:28] -rw-rw-r-- 1 whitlerd whitlerd       529 Mar 13 07:21 boinc_task_state.xml
[2026-03-13 07:22:28] -rw------- 1 whitlerd whitlerd      1037 Mar 13 07:21 memory_monitor_summary.json
[2026-03-13 07:22:28] -rw------- 1 whitlerd whitlerd    292283 Mar 13 07:21 log.48967085._016672.job.log.tgz.1
[2026-03-13 07:22:28] -rw------- 1 whitlerd whitlerd      6349 Mar 13 07:21 heartbeat.json
[2026-03-13 07:22:28] -rw------- 1 whitlerd whitlerd        95 Mar 13 07:22 pilot_heartbeat.json
[2026-03-13 07:22:28] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar 13 07:22 boinc_mmap_file
[2026-03-13 07:22:28] -rw-rw-r-- 1 whitlerd whitlerd        27 Mar 13 07:22 wrapper_checkpoint.txt
[2026-03-13 07:22:28] -rw------- 1 whitlerd whitlerd      5440 Mar 13 07:22 pilotlog.txt
[2026-03-13 07:22:28] -rw------- 1 whitlerd whitlerd   1073547 Mar 13 07:22 log.48967085._016672.job.log.1
[2026-03-13 07:22:28] -rw------- 1 whitlerd whitlerd       357 Mar 13 07:22 output.list
[2026-03-13 07:22:28] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar 13 07:22 runtime_log
[2026-03-13 07:22:28] -rw------- 1 whitlerd whitlerd   1382400 Mar 13 07:22 result.tar.gz
[2026-03-13 07:22:28] -rw-rw-r-- 1 whitlerd whitlerd      9040 Mar 13 07:22 runtime_log.err
[2026-03-13 07:22:28] -rw------- 1 whitlerd whitlerd       650 Mar 13 07:22 01PODmj87K9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmbOoLDmN4T3vm.diag
[2026-03-13 07:22:28] -rw-rw-r-- 1 whitlerd whitlerd     21329 Mar 13 07:22 stderr.txt
[2026-03-13 07:22:28] HITS file was successfully produced:
[2026-03-13 07:22:28] -rw------- 1 whitlerd whitlerd 192613172 Mar 13 07:21 shared/HITS.pool.root.1
[2026-03-13 07:22:28]  *** Contents of shared directory: ***
[2026-03-13 07:22:28] total 401536
[2026-03-13 07:22:28] -rw-r--r-- 2 whitlerd whitlerd 216548334 Mar 13 05:18 ATLAS.root_0
[2026-03-13 07:22:28] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 13 05:18 start_atlas.sh
[2026-03-13 07:22:28] -rw-r--r-- 2 whitlerd whitlerd    597514 Mar 13 05:18 input.tar.gz
[2026-03-13 07:22:28] -rw------- 1 whitlerd whitlerd 192613172 Mar 13 07:21 HITS.pool.root.1
[2026-03-13 07:22:28] -rw------- 1 whitlerd whitlerd   1382400 Mar 13 07:22 result.tar.gz
07:22:29 (604925): run_atlas exited; CPU time 28518.508118
07:22:29 (604925): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN