Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:06:47 (18751): wrapper (7.7.26015): starting
22:06:47 (18751): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 22:06:47] Arguments: --nthreads 8
[2026-03-13 22:06:47] Threads: 8
[2026-03-13 22:06:47] Checking for CVMFS
[2026-03-13 22:06:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 22:06:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 22:06:50] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 22:06:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 22:06:51] 2.11.2.0 7658 126636 130460 157253 2 54 19029210 25165824 188 130560 155 42199039 99.852 27895151 998 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-13 22:06:51] CVMFS is ok
[2026-03-13 22:06:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 22:06:51] Checking for apptainer binary...
[2026-03-13 22:06:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 22:06:51] Running /usr/bin/apptainer --version
[2026-03-13 22:06:51] apptainer version 1.3.2-1.el7
[2026-03-13 22:06:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 22:07:00] cg-vwn458.simple-grid.lan
[2026-03-13 22:07:00] apptainer works
[2026-03-13 22:07:00] Set ATHENA_PROC_NUMBER=8
[2026-03-13 22:07:00] Set ATHENA_CORE_NUMBER=8
[2026-03-13 22:07:00] Starting ATLAS job with PandaID=7043994564
[2026-03-13 22:07:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 01:50:53]  *** The last 200 lines of the pilot log: ***
[2026-03-14 01:50:53] 2026-03-14 00:50:03,019 | INFO     | job 7043994564 has finished - writing final server update
[2026-03-14 01:50:53] 2026-03-14 00:50:03,020 | INFO     | total number of processed events: 400 (read)
[2026-03-14 01:50:53] 2026-03-14 00:50:03,021 | INFO     | using path: /var/lib/boinc/slots/17/PanDA_Pilot-7043994564/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 01:50:53] 2026-03-14 00:50:03,022 | INFO     | extracted standard info from prmon json
[2026-03-14 01:50:53] 2026-03-14 00:50:03,022 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 01:50:53] 2026-03-14 00:50:03,022 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 01:50:53] 2026-03-14 00:50:03,023 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 01:50:53] 2026-03-14 00:50:03,023 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 01:50:53] 2026-03-14 00:50:03,027 | INFO     | fitting pss+swap vs Time
[2026-03-14 01:50:53] 2026-03-14 00:50:03,028 | INFO     | sum of square deviations: 2830787960.0
[2026-03-14 01:50:53] 2026-03-14 00:50:03,029 | INFO     | sum of deviations: 56994872065.000046
[2026-03-14 01:50:53] 2026-03-14 00:50:03,029 | INFO     | mean x: 1773443042.0
[2026-03-14 01:50:53] 2026-03-14 00:50:03,030 | INFO     | mean y: 2424571.3923444976
[2026-03-14 01:50:53] 2026-03-14 00:50:03,030 | INFO     | intersect: -35703944369.556
[2026-03-14 01:50:53] 2026-03-14 00:50:03,030 | INFO     | chi2: 9.769629430918167
[2026-03-14 01:50:53] 2026-03-14 00:50:03,031 | INFO     | sum of square deviations: 2632440055.0
[2026-03-14 01:50:53] 2026-03-14 00:50:03,032 | INFO     | sum of deviations: 83923377087.00003
[2026-03-14 01:50:53] 2026-03-14 00:50:03,032 | INFO     | mean x: 1773442889.5
[2026-03-14 01:50:53] 2026-03-14 00:50:03,033 | INFO     | mean y: 2444963.1078431373
[2026-03-14 01:50:53] 2026-03-14 00:50:03,033 | INFO     | intersect: -56535714785.32655
[2026-03-14 01:50:53] 2026-03-14 00:50:03,033 | INFO     | chi2: 8.29872438016423
[2026-03-14 01:50:53] 2026-03-14 00:50:03,033 | INFO     | current chi2=8.29872438016423 (change=15.055893994289383 %)
[2026-03-14 01:50:53] 2026-03-14 00:50:03,033 | INFO     | right removable region: 203
[2026-03-14 01:50:53] 2026-03-14 00:50:03,034 | INFO     | sum of square deviations: 2632440055.0
[2026-03-14 01:50:53] 2026-03-14 00:50:03,035 | INFO     | sum of deviations: -15543780330.99998
[2026-03-14 01:50:53] 2026-03-14 00:50:03,035 | INFO     | mean x: 1773443194.5
[2026-03-14 01:50:53] 2026-03-14 00:50:03,036 | INFO     | mean y: 2480303.225490196
[2026-03-14 01:50:53] 2026-03-14 00:50:03,036 | INFO     | intersect: 10474138106.964111
[2026-03-14 01:50:53] 2026-03-14 00:50:03,036 | INFO     | chi2: 4.596061808376772
[2026-03-14 01:50:53] 2026-03-14 00:50:03,036 | INFO     | current chi2=4.596061808376772 (change=52.95561780642865 %)
[2026-03-14 01:50:53] 2026-03-14 00:50:03,037 | INFO     | sum of square deviations: 2443580700.0
[2026-03-14 01:50:53] 2026-03-14 00:50:03,038 | INFO     | sum of deviations: -68257564670.000015
[2026-03-14 01:50:53] 2026-03-14 00:50:03,038 | INFO     | mean x: 1773443347.0
[2026-03-14 01:50:53] 2026-03-14 00:50:03,038 | INFO     | mean y: 2522781.894472362
[2026-03-14 01:50:53] 2026-03-14 00:50:03,039 | INFO     | intersect: 49540859676.77737
[2026-03-14 01:50:53] 2026-03-14 00:50:03,039 | INFO     | chi2: 2.0148711452096535
[2026-03-14 01:50:53] 2026-03-14 00:50:03,039 | INFO     | current chi2=2.0148711452096535 (change=56.160921475482475 %)
[2026-03-14 01:50:53] 2026-03-14 00:50:03,039 | INFO     | sum of square deviations: 2263977332.5
[2026-03-14 01:50:53] 2026-03-14 00:50:03,041 | INFO     | sum of deviations: -75531535381.50002
[2026-03-14 01:50:53] 2026-03-14 00:50:03,041 | INFO     | mean x: 1773443499.5
[2026-03-14 01:50:53] 2026-03-14 00:50:03,041 | INFO     | mean y: 2528900.7577319588
[2026-03-14 01:50:53] 2026-03-14 00:50:03,041 | INFO     | intersect: 59168717760.81136
[2026-03-14 01:50:53] 2026-03-14 00:50:03,042 | INFO     | chi2: 1.8947759149879
[2026-03-14 01:50:53] 2026-03-14 00:50:03,042 | INFO     | current chi2=1.8947759149879 (change=5.960442210276292 %)
[2026-03-14 01:50:53] 2026-03-14 00:50:03,042 | INFO     | left removable region: 30
[2026-03-14 01:50:53] 2026-03-14 00:50:03,042 | INFO     | sum of square deviations: 1605470102.0
[2026-03-14 01:50:53] 2026-03-14 00:50:03,043 | INFO     | sum of deviations: -33641948716.000004
[2026-03-14 01:50:53] 2026-03-14 00:50:03,044 | INFO     | mean x: 1773443774.0
[2026-03-14 01:50:53] 2026-03-14 00:50:03,044 | INFO     | mean y: 2540199.7572254334
[2026-03-14 01:50:53] 2026-03-14 00:50:03,044 | INFO     | intersect: 37164306352.42115
[2026-03-14 01:50:53] 2026-03-14 00:50:03,044 | INFO     | chi2: 0.1769500208221126
[2026-03-14 01:50:53] 2026-03-14 00:50:03,044 | INFO     | current memory leak: -20.95 B/s (using 173 data points, chi2=0.18)
[2026-03-14 01:50:53] 2026-03-14 00:50:03,045 | INFO     | could have reported an average CPU frequency of 2250 MHz (11 samples)
[2026-03-14 01:50:53] 2026-03-14 00:50:03,045 | INFO     | ..............................
[2026-03-14 01:50:53] 2026-03-14 00:50:03,045 | INFO     | . Timing measurements:
[2026-03-14 01:50:53] 2026-03-14 00:50:03,046 | INFO     | . get job = 0 s
[2026-03-14 01:50:53] 2026-03-14 00:50:03,046 | INFO     | . initial setup = 122 s
[2026-03-14 01:50:53] 2026-03-14 00:50:03,046 | INFO     | . payload setup = 157 s
[2026-03-14 01:50:53] 2026-03-14 00:50:03,046 | INFO     | . stage-in = 0 s
[2026-03-14 01:50:53] 2026-03-14 00:50:03,046 | INFO     | . payload execution = 12820 s
[2026-03-14 01:50:53] 2026-03-14 00:50:03,046 | INFO     | . stage-out = 5 s
[2026-03-14 01:50:53] 2026-03-14 00:50:03,046 | INFO     | . log creation = 1 s
[2026-03-14 01:50:53] 2026-03-14 00:50:03,046 | INFO     | ..............................
[2026-03-14 01:50:53] 2026-03-14 00:50:03,219 | INFO     | 
[2026-03-14 01:50:53] 2026-03-14 00:50:03,219 | INFO     | job summary report
[2026-03-14 01:50:53] 2026-03-14 00:50:03,220 | INFO     | --------------------------------------------------
[2026-03-14 01:50:53] 2026-03-14 00:50:03,220 | INFO     | PanDA job id: 7043994564
[2026-03-14 01:50:53] 2026-03-14 00:50:03,220 | INFO     | task id: 48955015
[2026-03-14 01:50:53] 2026-03-14 00:50:03,220 | INFO     | errors: (none)
[2026-03-14 01:50:53] 2026-03-14 00:50:03,220 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 01:50:53] 2026-03-14 00:50:03,220 | INFO     | pilot state: finished 
[2026-03-14 01:50:53] 2026-03-14 00:50:03,220 | INFO     | transexitcode: 0
[2026-03-14 01:50:53] 2026-03-14 00:50:03,220 | INFO     | exeerrorcode: 0
[2026-03-14 01:50:53] 2026-03-14 00:50:03,220 | INFO     | exeerrordiag: 
[2026-03-14 01:50:53] 2026-03-14 00:50:03,221 | INFO     | exitcode: 0
[2026-03-14 01:50:53] 2026-03-14 00:50:03,221 | INFO     | exitmsg: OK
[2026-03-14 01:50:53] 2026-03-14 00:50:03,221 | INFO     | cpuconsumptiontime: 47392 s
[2026-03-14 01:50:53] 2026-03-14 00:50:03,221 | INFO     | nevents: 400
[2026-03-14 01:50:53] 2026-03-14 00:50:03,221 | INFO     | neventsw: 0
[2026-03-14 01:50:53] 2026-03-14 00:50:03,221 | INFO     | pid: 27179
[2026-03-14 01:50:53] 2026-03-14 00:50:03,221 | INFO     | pgrp: 27179
[2026-03-14 01:50:53] 2026-03-14 00:50:03,221 | INFO     | corecount: 8
[2026-03-14 01:50:53] 2026-03-14 00:50:03,221 | INFO     | event service: False
[2026-03-14 01:50:53] 2026-03-14 00:50:03,221 | INFO     | sizes: {0: 2279146, 1: 2279832, 2: 2280233, 3: 2280321, 13: 2280321, 12982: 2310510, 12989: 2319510, 12990: 2319566, 12991: 2319760}
[2026-03-14 01:50:53] 2026-03-14 00:50:03,222 | INFO     | --------------------------------------------------
[2026-03-14 01:50:53] 2026-03-14 00:50:03,222 | INFO     | 
[2026-03-14 01:50:53] 2026-03-14 00:50:03,222 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2026-03-14 01:50:53] 2026-03-14 00:50:03,226 | INFO     | time since job start (13004s) is within the limit (345600.0s)
[2026-03-14 01:50:53] 2026-03-14 00:50:03,928 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 01:50:53] 2026-03-14 00:50:03,929 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 01:50:53] 2026-03-14 00:50:03,929 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 01:50:53] 2026-03-14 00:50:03,929 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 01:50:53] 2026-03-14 00:50:03,929 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 01:50:53] 2026-03-14 00:50:03,929 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 01:50:53] 2026-03-14 00:50:03,929 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 01:50:53] 2026-03-14 00:50:03,929 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 01:50:53] 2026-03-14 00:50:03,929 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 01:50:53] 2026-03-14 00:50:03,930 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 01:50:53] 2026-03-14 00:50:03,930 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 01:50:53] 2026-03-14 00:50:03,930 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 01:50:53] 2026-03-14 00:50:03,930 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 01:50:53] 2026-03-14 00:50:03,930 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 01:50:53] 2026-03-14 00:50:03,930 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 01:50:53] 2026-03-14 00:50:03,930 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 01:50:53] 2026-03-14 00:50:03,930 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 01:50:53] 2026-03-14 00:50:03,930 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 01:50:53] 2026-03-14 00:50:03,930 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 01:50:53] 2026-03-14 00:50:03,930 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 01:50:53] 2026-03-14 00:50:03,931 | INFO     | job 7043994564 has completed (purged errors)
[2026-03-14 01:50:53] 2026-03-14 00:50:03,931 | INFO     | overall cleanup function is called
[2026-03-14 01:50:53] 2026-03-14 00:50:04,939 | INFO     | --- collectZombieJob: --- 10, [27179]
[2026-03-14 01:50:53] 2026-03-14 00:50:04,939 | INFO     | zombie collector waiting for pid 27179
[2026-03-14 01:50:53] 2026-03-14 00:50:04,940 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 01:50:53] 2026-03-14 00:50:04,940 | INFO     | collected zombie processes
[2026-03-14 01:50:53] 2026-03-14 00:50:04,940 | INFO     | will attempt to kill all subprocesses of pid=27179
[2026-03-14 01:50:53] 2026-03-14 00:50:05,017 | INFO     | process IDs to be killed: [27179] (in reverse order)
[2026-03-14 01:50:53] 2026-03-14 00:50:05,759 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 01:50:53] 2026-03-14 00:50:05,759 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 01:50:53] 2026-03-14 00:50:05,761 | INFO     | did not find any defunct processes belonging to 27179
[2026-03-14 01:50:53] 2026-03-14 00:50:05,763 | INFO     | did not find any defunct processes belonging to 27179
[2026-03-14 01:50:53] 2026-03-14 00:50:05,763 | INFO     | ready for new job
[2026-03-14 01:50:53] 2026-03-14 00:50:05,763 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 01:50:53] 2026-03-14 00:50:05,765 | INFO     | **************************************
[2026-03-14 01:50:53] 2026-03-14 00:50:05,765 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 01:50:53] 2026-03-14 00:50:05,765 | INFO     | **************************************
[2026-03-14 01:50:53] 2026-03-14 00:50:05,765 | INFO     | 
[2026-03-14 01:50:53] 2026-03-14 00:50:05,766 | INFO     | pilot is running in a VM
[2026-03-14 01:50:53] 2026-03-14 00:50:05,766 | INFO     | architecture information:
[2026-03-14 01:50:53] 2026-03-14 00:50:05,774 | INFO     | executing command: cat /etc/os-release
[2026-03-14 01:50:53] 2026-03-14 00:50:06,040 | INFO     | cat /etc/os-release:
[2026-03-14 01:50:53] NAME="CentOS Linux"
[2026-03-14 01:50:53] VERSION="7 (Core)"
[2026-03-14 01:50:53] ID="centos"
[2026-03-14 01:50:53] ID_LIKE="rhel fedora"
[2026-03-14 01:50:53] VERSION_ID="7"
[2026-03-14 01:50:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 01:50:53] ANSI_COLOR="0;31"
[2026-03-14 01:50:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 01:50:53] HOME_URL="https://www.centos.org/"
[2026-03-14 01:50:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 01:50:53] 
[2026-03-14 01:50:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 01:50:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 01:50:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 01:50:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 01:50:53] 
[2026-03-14 01:50:53] 2026-03-14 00:50:06,040 | INFO     | **************************************
[2026-03-14 01:50:53] 2026-03-14 00:50:06,543 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2026-03-14 01:50:53] 2026-03-14 00:50:06,762 | INFO     | sufficient remaining disk space (495444819968 B)
[2026-03-14 01:50:53] 2026-03-14 00:50:06,762 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 01:50:53] 2026-03-14 00:50:06,762 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 01:50:53] 2026-03-14 00:50:06,762 | INFO     | update_server=False
[2026-03-14 01:50:53] 2026-03-14 00:50:06,762 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 01:50:53] 2026-03-14 00:50:06,767 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 01:50:53] 2026-03-14 00:50:06,768 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 01:50:53] 2026-03-14 00:50:06,768 | INFO     | aborting loop
[2026-03-14 01:50:53] 2026-03-14 00:50:06,867 | INFO     | all job control threads have been joined
[2026-03-14 01:50:53] 2026-03-14 00:50:07,244 | INFO     | all data control threads have been joined
[2026-03-14 01:50:53] 2026-03-14 00:50:07,657 | INFO     | all payload control threads have been joined
[2026-03-14 01:50:53] 2026-03-14 00:50:07,768 | INFO     | [job] retrieve thread has finished
[2026-03-14 01:50:53] 2026-03-14 00:50:07,774 | INFO     | [job] job monitor thread has finished
[2026-03-14 01:50:53] 2026-03-14 00:50:07,872 | INFO     | [job] control thread has finished
[2026-03-14 01:50:53] 2026-03-14 00:50:08,000 | INFO     | [payload] validate_post thread has finished
[2026-03-14 01:50:53] 2026-03-14 00:50:08,089 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 01:50:53] 2026-03-14 00:50:08,124 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 01:50:53] 2026-03-14 00:50:08,232 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 01:50:53] 2026-03-14 00:50:08,250 | INFO     | [data] control thread has finished
[2026-03-14 01:50:53] 2026-03-14 00:50:08,269 | INFO     | [payload] failed_post thread has finished
[2026-03-14 01:50:53] 2026-03-14 00:50:08,576 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 01:50:53] 2026-03-14 00:50:08,621 | INFO     | [job] validate thread has finished
[2026-03-14 01:50:53] 2026-03-14 00:50:08,663 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 01:50:53] 2026-03-14 00:50:08,664 | INFO     | [payload] control thread has finished
[2026-03-14 01:50:53] 2026-03-14 00:50:08,777 | INFO     | [data] copytool_out thread has finished
[2026-03-14 01:50:53] 2026-03-14 00:50:08,948 | INFO     | [data] copytool_in thread has finished
[2026-03-14 01:50:53] 2026-03-14 00:50:09,177 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 01:50:53] 2026-03-14 00:50:09,238 | INFO     | [job] queue monitor thread has finished
[2026-03-14 01:50:53] 2026-03-14 00:50:12,098 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 01:50:53] 2026-03-14 00:50:36,351 | INFO     | PID=22732 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-14 01:50:53] 2026-03-14 00:50:36,351 | INFO     | .. there are 2 such processes running
[2026-03-14 01:50:53] 2026-03-14 00:50:36,352 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 01:50:53] 2026-03-14 00:50:36,353 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 01:50:53] 2026-03-14 00:50:36,353 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 01:50:53] 2026-03-14 00:50:40,725 | INFO     | [monitor] cgroup control has ended
[2026-03-14 01:50:53] 2026-03-14 00:50:42,695 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139763466442560)>', '<ExcThread(monitor, started 139763017291520)>']
[2026-03-14 01:50:53] 2026-03-14 00:50:43,394 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 01:50:53] 2026-03-14 00:50:43,394 | INFO     | [monitor] control thread has ended
[2026-03-14 01:50:53] 2026-03-14 00:50:47,721 | INFO     | all workflow threads have been joined
[2026-03-14 01:50:53] 2026-03-14 00:50:47,721 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 01:50:53] 2026-03-14 00:50:47,722 | INFO     | traces error code: 0
[2026-03-14 01:50:53] 2026-03-14 00:50:47,722 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 01:50:53] 2026-03-14 00:50:48,217 [wrapper] ==== pilot stdout END ====
[2026-03-14 01:50:53] 2026-03-14 00:50:48,295 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 01:50:53] 2026-03-14 00:50:48,381 [wrapper] pilotpid: 22732
[2026-03-14 01:50:53] 2026-03-14 00:50:48,501 [wrapper] Pilot exit status: 0
[2026-03-14 01:50:53] 2026-03-14 00:50:48,959 [wrapper] pandaids: 7043994564
[2026-03-14 01:50:53] 2026-03-14 00:50:50,053 [wrapper] cleanup supervisor_pilot   762 22733
[2026-03-14 01:50:53] 2026-03-14 00:50:50,133 [wrapper] Test setup, not cleaning
[2026-03-14 01:50:53] 2026-03-14 00:50:50,221 [wrapper] apfmon messages muted
[2026-03-14 01:50:53] 2026-03-14 00:50:50,325 [wrapper] ==== wrapper stdout END ====
[2026-03-14 01:50:53] 2026-03-14 00:50:50,417 [wrapper] ==== wrapper stderr END ====
[2026-03-14 01:50:53]  *** Error codes and diagnostics ***
[2026-03-14 01:50:53]     "exeErrorCode": 0,
[2026-03-14 01:50:53]     "exeErrorDiag": "",
[2026-03-14 01:50:53]     "pilotErrorCode": 0,
[2026-03-14 01:50:53]     "pilotErrorDiag": "",
[2026-03-14 01:50:53]  *** Listing of results directory ***
[2026-03-14 01:50:53] total 607084
[2026-03-14 01:50:53] -rw-r--r--. 1 boinc boinc    585013 Mar 13 09:44 pilot3.tar.gz
[2026-03-14 01:50:53] -rwx------. 1 boinc boinc     36322 Mar 13 09:48 runpilot2-wrapper.sh
[2026-03-14 01:50:53] -rw-r--r--. 1 boinc boinc      5111 Mar 13 09:49 queuedata.json
[2026-03-14 01:50:53] -rw-r--r--. 1 boinc boinc       100 Mar 13 22:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 01:50:53] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 22:06 run_atlas
[2026-03-14 01:50:53] -rw-r--r--. 1 boinc boinc       105 Mar 13 22:06 job.xml
[2026-03-14 01:50:53] -rw-r--r--. 2 boinc boinc 436965021 Mar 13 22:06 EVNT.46701403._002365.pool.root.1
[2026-03-14 01:50:53] -rw-r--r--. 2 boinc boinc    597534 Mar 13 22:06 input.tar.gz
[2026-03-14 01:50:53] -rw-r--r--. 1 boinc boinc      6391 Mar 13 22:06 init_data.xml
[2026-03-14 01:50:53] -rw-r--r--. 2 boinc boinc     15845 Mar 13 22:06 start_atlas.sh
[2026-03-14 01:50:53] drwxrwx--x. 2 boinc boinc        68 Mar 13 22:06 shared
[2026-03-14 01:50:53] -rw-r--r--. 1 boinc boinc         0 Mar 13 22:06 boinc_lockfile
[2026-03-14 01:50:53] -rw-r--r--. 1 boinc boinc      2571 Mar 13 22:07 pandaJob.out
[2026-03-14 01:50:53] -rw-------. 1 boinc boinc       413 Mar 13 22:13 workernode_map.json
[2026-03-14 01:50:53] -rw-------. 1 boinc boinc   1006721 Mar 13 22:13 agis_schedconf.cvmfs.json
[2026-03-14 01:50:53] drwx------. 5 boinc boinc      4096 Mar 13 22:13 pilot3
[2026-03-14 01:50:53] -rw-------. 1 boinc boinc 176177948 Mar 14 01:48 HITS.48955015._015518.pool.root.1
[2026-03-14 01:50:53] -rw-r--r--. 1 boinc boinc       532 Mar 14 01:48 boinc_task_state.xml
[2026-03-14 01:50:53] -rw-------. 1 boinc boinc      1015 Mar 14 01:49 memory_monitor_summary.json
[2026-03-14 01:50:53] -rw-------. 1 boinc boinc   1511579 Mar 14 01:49 agis_ddmendpoints.agis.ALL.json
[2026-03-14 01:50:53] -rw-------. 1 boinc boinc    454885 Mar 14 01:49 log.48955015._015518.job.log.tgz.1
[2026-03-14 01:50:53] -rw-------. 1 boinc boinc      6339 Mar 14 01:50 heartbeat.json
[2026-03-14 01:50:53] -rw-r--r--. 1 boinc boinc      8192 Mar 14 01:50 boinc_mmap_file
[2026-03-14 01:50:53] -rw-r--r--. 1 boinc boinc        28 Mar 14 01:50 wrapper_checkpoint.txt
[2026-03-14 01:50:53] -rw-------. 1 boinc boinc        95 Mar 14 01:50 pilot_heartbeat.json
[2026-03-14 01:50:53] -rw-------. 1 boinc boinc      4881 Mar 14 01:50 pilotlog.txt
[2026-03-14 01:50:53] -rw-------. 1 boinc boinc   1838293 Mar 14 01:50 log.48955015._015518.job.log.1
[2026-03-14 01:50:53] -rw-------. 1 boinc boinc       357 Mar 14 01:50 output.list
[2026-03-14 01:50:53] -rw-r--r--. 1 boinc boinc       620 Mar 14 01:50 runtime_log
[2026-03-14 01:50:53] -rw-------. 1 boinc boinc   2314240 Mar 14 01:50 result.tar.gz
[2026-03-14 01:50:53] -rw-r--r--. 1 boinc boinc      8832 Mar 14 01:50 runtime_log.err
[2026-03-14 01:50:53] -rw-------. 1 boinc boinc       655 Mar 14 01:50 fefLDm8MDL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmsbmLDmlaJfUn.diag
[2026-03-14 01:50:53] -rw-r--r--. 1 boinc boinc     20746 Mar 14 01:50 stderr.txt
[2026-03-14 01:50:54] HITS file was successfully produced:
[2026-03-14 01:50:54] -rw-------. 1 boinc boinc 176177948 Mar 14 01:48 shared/HITS.pool.root.1
[2026-03-14 01:50:54]  *** Contents of shared directory: ***
[2026-03-14 01:50:54] total 601636
[2026-03-14 01:50:54] -rw-r--r--. 2 boinc boinc 436965021 Mar 13 22:06 ATLAS.root_0
[2026-03-14 01:50:54] -rw-r--r--. 2 boinc boinc    597534 Mar 13 22:06 input.tar.gz
[2026-03-14 01:50:54] -rw-r--r--. 2 boinc boinc     15845 Mar 13 22:06 start_atlas.sh
[2026-03-14 01:50:54] -rw-------. 1 boinc boinc 176177948 Mar 14 01:48 HITS.pool.root.1
[2026-03-14 01:50:54] -rw-------. 1 boinc boinc   2314240 Mar 14 01:50 result.tar.gz
01:50:55 (18751): run_atlas exited; CPU time 47518.768593
01:50:55 (18751): called boinc_finish(0)

</stderr_txt>
]]>

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