Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:53:58 (1674752): wrapper (7.7.26015): starting
04:53:58 (1674752): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 04:53:58] Arguments: --nthreads 8
[2026-03-13 04:53:58] Threads: 8
[2026-03-13 04:53:58] Checking for CVMFS
[2026-03-13 04:53:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 04:53:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 04:53:58] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 04:53:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 04:53:59] 2.13.3.0 7268 113389 414632 157233 3 581 21686114 40960000 45060 16776704 0 700984834 99.689 577107017 33032 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-13 04:53:59] CVMFS is ok
[2026-03-13 04:53:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 04:53:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 04:53:59] Further information can be found at the LHC@home message board.
[2026-03-13 04:53:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 04:53:59] Checking for apptainer binary...
[2026-03-13 04:53:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 04:53:59] Running /usr/bin/apptainer --version
[2026-03-13 04:53:59] apptainer version 1.4.5-2.el9
[2026-03-13 04:53:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 04:53:59] c-212-18.aglt2.org
[2026-03-13 04:53:59] apptainer works
[2026-03-13 04:53:59] Set ATHENA_PROC_NUMBER=8
[2026-03-13 04:53:59] Set ATHENA_CORE_NUMBER=8
[2026-03-13 04:53:59] Starting ATLAS job with PandaID=7051881705
[2026-03-13 04:53:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 10:01:35]  *** The last 200 lines of the pilot log: ***
[2026-03-13 10:01:35] 2026-03-13 14:00:22,523 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-13 10:01:35] 2026-03-13 14:00:22,523 | INFO     | log transfer has been attempted: DONE
[2026-03-13 10:01:35] 2026-03-13 14:00:22,523 | INFO     | job 7051881705 has finished - writing final server update
[2026-03-13 10:01:35] 2026-03-13 14:00:22,523 | INFO     | total number of processed events: 400 (read)
[2026-03-13 10:01:35] 2026-03-13 14:00:22,594 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7051881705/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 10:01:35] 2026-03-13 14:00:22,594 | INFO     | extracted standard info from prmon json
[2026-03-13 10:01:35] 2026-03-13 14:00:22,594 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 10:01:35] 2026-03-13 14:00:22,594 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 10:01:35] 2026-03-13 14:00:22,595 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 10:01:35] 2026-03-13 14:00:22,595 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 10:01:35] 2026-03-13 14:00:22,618 | INFO     | fitting pss+swap vs Time
[2026-03-13 10:01:35] 2026-03-13 14:00:22,618 | INFO     | sum of square deviations: 8372020914.986662
[2026-03-13 10:01:35] 2026-03-13 14:00:22,622 | INFO     | sum of deviations: 73077874758.63998
[2026-03-13 10:01:35] 2026-03-13 14:00:22,622 | INFO     | mean x: 1773401276.8266666
[2026-03-13 10:01:35] 2026-03-13 14:00:22,622 | INFO     | mean y: 2467435.82
[2026-03-13 10:01:35] 2026-03-13 14:00:22,623 | INFO     | intersect: -15477235460.378254
[2026-03-13 10:01:35] 2026-03-13 14:00:22,623 | INFO     | chi2: 3.3188276464982063
[2026-03-13 10:01:35] 2026-03-13 14:00:22,623 | INFO     | sum of square deviations: 7960377969.444096
[2026-03-13 10:01:35] 2026-03-13 14:00:22,625 | INFO     | sum of deviations: 91721321569.97618
[2026-03-13 10:01:35] 2026-03-13 14:00:22,625 | INFO     | mean x: 1773401124.3322034
[2026-03-13 10:01:35] 2026-03-13 14:00:22,625 | INFO     | mean y: 2474241.9288135595
[2026-03-13 10:01:35] 2026-03-13 14:00:22,625 | INFO     | intersect: -20431064896.764927
[2026-03-13 10:01:35] 2026-03-13 14:00:22,626 | INFO     | chi2: 2.542868112149308
[2026-03-13 10:01:35] 2026-03-13 14:00:22,626 | INFO     | current chi2=2.542868112149308 (change=23.38053122968396 %)
[2026-03-13 10:01:35] 2026-03-13 14:00:22,626 | INFO     | right removable region: 294
[2026-03-13 10:01:35] 2026-03-13 14:00:22,626 | INFO     | sum of square deviations: 7960336245.10509
[2026-03-13 10:01:35] 2026-03-13 14:00:22,666 | INFO     | sum of deviations: -19352344.19323349
[2026-03-13 10:01:35] 2026-03-13 14:00:22,666 | INFO     | mean x: 1773401429.3288136
[2026-03-13 10:01:35] 2026-03-13 14:00:22,666 | INFO     | mean y: 2494416.1050847457
[2026-03-13 10:01:35] 2026-03-13 14:00:22,666 | INFO     | intersect: 6805725.803120039
[2026-03-13 10:01:35] 2026-03-13 14:00:22,667 | INFO     | chi2: 0.8547674079535518
[2026-03-13 10:01:35] 2026-03-13 14:00:22,667 | INFO     | current chi2=0.8547674079535518 (change=74.24489913311882 %)
[2026-03-13 10:01:35] 2026-03-13 14:00:22,667 | INFO     | sum of square deviations: 7562372884.72066
[2026-03-13 10:01:35] 2026-03-13 14:00:22,669 | INFO     | sum of deviations: -8913485352.248274
[2026-03-13 10:01:35] 2026-03-13 14:00:22,669 | INFO     | mean x: 1773401581.8310344
[2026-03-13 10:01:35] 2026-03-13 14:00:22,669 | INFO     | mean y: 2497814.627586207
[2026-03-13 10:01:35] 2026-03-13 14:00:22,670 | INFO     | intersect: 2092739761.7342093
[2026-03-13 10:01:35] 2026-03-13 14:00:22,670 | INFO     | chi2: 0.819791497987872
[2026-03-13 10:01:35] 2026-03-13 14:00:22,670 | INFO     | current chi2=0.819791497987872 (change=4.091862843649788 %)
[2026-03-13 10:01:35] 2026-03-13 14:00:22,670 | INFO     | left removable region: 20
[2026-03-13 10:01:35] 2026-03-13 14:00:22,670 | INFO     | sum of square deviations: 6378470483.609506
[2026-03-13 10:01:35] 2026-03-13 14:00:22,672 | INFO     | sum of deviations: 16204184263.708025
[2026-03-13 10:01:35] 2026-03-13 14:00:22,672 | INFO     | mean x: 1773401703.8357663
[2026-03-13 10:01:35] 2026-03-13 14:00:22,672 | INFO     | mean y: 2502907.437956204
[2026-03-13 10:01:35] 2026-03-13 14:00:22,672 | INFO     | intersect: -4502735151.807062
[2026-03-13 10:01:35] 2026-03-13 14:00:22,673 | INFO     | chi2: 0.00916050114444117
[2026-03-13 10:01:35] 2026-03-13 14:00:22,673 | INFO     | current memory leak: 2.54 B/s (using 274 data points, chi2=0.01)
[2026-03-13 10:01:35] 2026-03-13 14:00:22,673 | INFO     | could have reported an average CPU frequency of 3408 MHz (14 samples)
[2026-03-13 10:01:35] 2026-03-13 14:00:22,673 | INFO     | ..............................
[2026-03-13 10:01:35] 2026-03-13 14:00:22,673 | INFO     | . Timing measurements:
[2026-03-13 10:01:35] 2026-03-13 14:00:22,673 | INFO     | . get job = 0 s
[2026-03-13 10:01:35] 2026-03-13 14:00:22,673 | INFO     | . initial setup = 21 s
[2026-03-13 10:01:35] 2026-03-13 14:00:22,673 | INFO     | . payload setup = 27 s
[2026-03-13 10:01:35] 2026-03-13 14:00:22,674 | INFO     | . stage-in = 0 s
[2026-03-13 10:01:35] 2026-03-13 14:00:22,681 | INFO     | . payload execution = 18272 s
[2026-03-13 10:01:35] 2026-03-13 14:00:22,681 | INFO     | . stage-out = 5 s
[2026-03-13 10:01:35] 2026-03-13 14:00:22,681 | INFO     | . log creation = 0 s
[2026-03-13 10:01:35] 2026-03-13 14:00:22,681 | INFO     | ..............................
[2026-03-13 10:01:35] 2026-03-13 14:00:22,780 | INFO     | 
[2026-03-13 10:01:35] 2026-03-13 14:00:22,780 | INFO     | job summary report
[2026-03-13 10:01:35] 2026-03-13 14:00:22,780 | INFO     | --------------------------------------------------
[2026-03-13 10:01:35] 2026-03-13 14:00:22,780 | INFO     | PanDA job id: 7051881705
[2026-03-13 10:01:35] 2026-03-13 14:00:22,780 | INFO     | task id: 48967094
[2026-03-13 10:01:35] 2026-03-13 14:00:22,780 | INFO     | errors: (none)
[2026-03-13 10:01:35] 2026-03-13 14:00:22,780 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 10:01:35] 2026-03-13 14:00:22,781 | INFO     | pilot state: finished 
[2026-03-13 10:01:35] 2026-03-13 14:00:22,781 | INFO     | transexitcode: 0
[2026-03-13 10:01:35] 2026-03-13 14:00:22,781 | INFO     | exeerrorcode: 0
[2026-03-13 10:01:35] 2026-03-13 14:00:22,781 | INFO     | exeerrordiag: 
[2026-03-13 10:01:35] 2026-03-13 14:00:22,781 | INFO     | exitcode: 0
[2026-03-13 10:01:35] 2026-03-13 14:00:22,781 | INFO     | exitmsg: OK
[2026-03-13 10:01:35] 2026-03-13 14:00:22,781 | INFO     | cpuconsumptiontime: 37939 s
[2026-03-13 10:01:35] 2026-03-13 14:00:22,781 | INFO     | nevents: 400
[2026-03-13 10:01:35] 2026-03-13 14:00:22,781 | INFO     | neventsw: 0
[2026-03-13 10:01:35] 2026-03-13 14:00:22,781 | INFO     | pid: 1714899
[2026-03-13 10:01:35] 2026-03-13 14:00:22,781 | INFO     | pgrp: 1714899
[2026-03-13 10:01:35] 2026-03-13 14:00:22,781 | INFO     | corecount: 8
[2026-03-13 10:01:35] 2026-03-13 14:00:22,781 | INFO     | event service: False
[2026-03-13 10:01:35] 2026-03-13 14:00:22,781 | INFO     | sizes: {0: 2279735, 1: 2280252, 12: 2280252, 18303: 2312700, 18304: 2312699, 18310: 2321753, 18313: 2322131}
[2026-03-13 10:01:35] 2026-03-13 14:00:22,782 | INFO     | --------------------------------------------------
[2026-03-13 10:01:35] 2026-03-13 14:00:22,782 | INFO     | 
[2026-03-13 10:01:35] 2026-03-13 14:00:22,782 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-13 10:01:35] 2026-03-13 14:00:22,884 | WARNING  | process 1714899 can no longer be monitored (due to stat problems) - aborting
[2026-03-13 10:01:35] 2026-03-13 14:00:22,884 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7051881705/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 10:01:35] 2026-03-13 14:00:22,900 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 10:01:35] 2026-03-13 14:00:22,900 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 10:01:35] 2026-03-13 14:00:22,901 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 10:01:35] 2026-03-13 14:00:22,901 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 10:01:35] 2026-03-13 14:00:22,901 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 10:01:35] 2026-03-13 14:00:22,901 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 10:01:35] 2026-03-13 14:00:22,901 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 10:01:35] 2026-03-13 14:00:22,901 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 10:01:35] 2026-03-13 14:00:22,901 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 10:01:35] 2026-03-13 14:00:22,901 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 10:01:35] 2026-03-13 14:00:22,901 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 10:01:35] 2026-03-13 14:00:22,901 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 10:01:35] 2026-03-13 14:00:22,901 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 10:01:35] 2026-03-13 14:00:22,901 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 10:01:35] 2026-03-13 14:00:22,901 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 10:01:35] 2026-03-13 14:00:22,901 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 10:01:35] 2026-03-13 14:00:22,902 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 10:01:35] 2026-03-13 14:00:22,902 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 10:01:35] 2026-03-13 14:00:22,902 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 10:01:35] 2026-03-13 14:00:22,902 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 10:01:35] 2026-03-13 14:00:22,902 | INFO     | job 7051881705 has completed (purged errors)
[2026-03-13 10:01:35] 2026-03-13 14:00:22,902 | INFO     | overall cleanup function is called
[2026-03-13 10:01:35] 2026-03-13 14:00:23,511 | INFO     | number of running child processes to parent process 1714899: 1
[2026-03-13 10:01:35] 2026-03-13 14:00:23,511 | INFO     | maximum number of monitored processes: 6
[2026-03-13 10:01:35] 2026-03-13 14:00:23,511 | INFO     | aborting job monitoring since job object (job id=7051881705) has expired
[2026-03-13 10:01:35] 2026-03-13 14:00:23,915 | INFO     | --- collectZombieJob: --- 10, [1714899]
[2026-03-13 10:01:35] 2026-03-13 14:00:23,915 | INFO     | zombie collector waiting for pid 1714899
[2026-03-13 10:01:35] 2026-03-13 14:00:23,915 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 10:01:35] 2026-03-13 14:00:23,915 | INFO     | collected zombie processes
[2026-03-13 10:01:35] 2026-03-13 14:00:23,915 | INFO     | will attempt to kill all subprocesses of pid=1714899
[2026-03-13 10:01:35] 2026-03-13 14:00:27,035 | INFO     | process IDs to be killed: [1714899] (in reverse order)
[2026-03-13 10:01:35] 2026-03-13 14:00:27,368 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 10:01:35] 2026-03-13 14:00:27,368 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 10:01:35] 2026-03-13 14:00:27,436 | INFO     | did not find any defunct processes belonging to 1714899
[2026-03-13 10:01:35] 2026-03-13 14:00:27,597 | INFO     | did not find any defunct processes belonging to 1714899
[2026-03-13 10:01:35] 2026-03-13 14:00:27,598 | INFO     | ready for new job
[2026-03-13 10:01:35] 2026-03-13 14:00:27,598 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 10:01:35] 2026-03-13 14:00:27,600 | INFO     | **************************************
[2026-03-13 10:01:35] 2026-03-13 14:00:27,619 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 10:01:35] 2026-03-13 14:00:27,619 | INFO     | **************************************
[2026-03-13 10:01:35] 2026-03-13 14:00:27,619 | INFO     | 
[2026-03-13 10:01:35] 2026-03-13 14:00:27,623 | INFO     | architecture information:
[2026-03-13 10:01:35] 2026-03-13 14:00:27,627 | INFO     | executing command: cat /etc/os-release
[2026-03-13 10:01:35] 2026-03-13 14:00:27,748 | INFO     | cat /etc/os-release:
[2026-03-13 10:01:35] NAME="CentOS Linux"
[2026-03-13 10:01:35] VERSION="7 (Core)"
[2026-03-13 10:01:35] ID="centos"
[2026-03-13 10:01:35] ID_LIKE="rhel fedora"
[2026-03-13 10:01:35] VERSION_ID="7"
[2026-03-13 10:01:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 10:01:35] ANSI_COLOR="0;31"
[2026-03-13 10:01:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 10:01:35] HOME_URL="https://www.centos.org/"
[2026-03-13 10:01:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 10:01:35] 
[2026-03-13 10:01:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 10:01:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 10:01:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 10:01:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 10:01:35] 
[2026-03-13 10:01:35] 2026-03-13 14:00:27,748 | INFO     | **************************************
[2026-03-13 10:01:35] 2026-03-13 14:00:28,252 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-13 10:01:35] 2026-03-13 14:00:28,366 | INFO     | sufficient remaining disk space (126964727808 B)
[2026-03-13 10:01:35] 2026-03-13 14:00:28,366 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 10:01:35] 2026-03-13 14:00:28,367 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 10:01:35] 2026-03-13 14:00:28,367 | INFO     | update_server=False
[2026-03-13 10:01:35] 2026-03-13 14:00:28,367 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 10:01:35] 2026-03-13 14:00:28,367 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 10:01:35] 2026-03-13 14:00:28,367 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 10:01:35] 2026-03-13 14:00:28,502 | INFO     | all data control threads have been joined
[2026-03-13 10:01:35] 2026-03-13 14:00:28,536 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-13 10:01:35] 2026-03-13 14:00:28,536 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-13 10:01:35] 2026-03-13 14:00:28,536 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 10:01:35] 2026-03-13 14:00:28,536 | INFO     | will abort loop
[2026-03-13 10:01:35] 2026-03-13 14:00:28,569 | INFO     | all payload control threads have been joined
[2026-03-13 10:01:35] 2026-03-13 14:00:28,596 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 10:01:35] 2026-03-13 14:00:29,300 | INFO     | all job control threads have been joined
[2026-03-13 10:01:35] 2026-03-13 14:00:29,373 | INFO     | [job] retrieve thread has finished
[2026-03-13 10:01:35] 2026-03-13 14:00:29,377 | INFO     | [job] queue monitor thread has finished
[2026-03-13 10:01:35] 2026-03-13 14:00:29,445 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 10:01:35] 2026-03-13 14:00:29,508 | INFO     | [data] control thread has finished
[2026-03-13 10:01:35] 2026-03-13 14:00:29,542 | INFO     | [job] job monitor thread has finished
[2026-03-13 10:01:35] 2026-03-13 14:00:29,575 | INFO     | [payload] control thread has finished
[2026-03-13 10:01:35] 2026-03-13 14:00:30,127 | INFO     | [payload] failed_post thread has finished
[2026-03-13 10:01:35] 2026-03-13 14:00:30,137 | INFO     | [job] validate thread has finished
[2026-03-13 10:01:35] 2026-03-13 14:00:30,141 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 10:01:35] 2026-03-13 14:00:30,306 | INFO     | [job] control thread has finished
[2026-03-13 10:01:35] 2026-03-13 14:00:30,374 | INFO     | [data] copytool_out thread has finished
[2026-03-13 10:01:35] 2026-03-13 14:00:30,620 | INFO     | [data] copytool_in thread has finished
[2026-03-13 10:01:35] 2026-03-13 14:00:30,624 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 10:01:35] 2026-03-13 14:00:30,624 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 10:01:35] 2026-03-13 14:00:30,798 | INFO     | [payload] validate_post thread has finished
[2026-03-13 10:01:35] 2026-03-13 14:00:32,606 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 10:01:35] 2026-03-13 14:00:59,036 | INFO     | PID=1690119 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-13 10:01:35] 2026-03-13 14:00:59,036 | INFO     | .. there are 90 such processes running
[2026-03-13 10:01:35] 2026-03-13 14:00:59,037 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 10:01:35] 2026-03-13 14:00:59,037 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 10:01:35] 2026-03-13 14:00:59,037 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 10:01:35] 2026-03-13 14:01:28,080 | INFO     | [monitor] cgroup control has ended
[2026-03-13 10:01:35] 2026-03-13 14:01:28,651 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139875167483712)>', '<ExcThread(monitor, started 139874893317888)>']
[2026-03-13 10:01:35] 2026-03-13 14:01:29,321 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 10:01:35] 2026-03-13 14:01:29,321 | INFO     | [monitor] control thread has ended
[2026-03-13 10:01:35] 2026-03-13 14:01:33,678 | INFO     | all workflow threads have been joined
[2026-03-13 10:01:35] 2026-03-13 14:01:33,678 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 10:01:35] 2026-03-13 14:01:33,678 | INFO     | traces error code: 0
[2026-03-13 10:01:35] 2026-03-13 14:01:33,678 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 10:01:35] 2026-03-13 14:01:34,220 [wrapper] ==== pilot stdout END ====
[2026-03-13 10:01:35] 2026-03-13 14:01:34,253 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 10:01:35] 2026-03-13 14:01:34,284 [wrapper] pilotpid: 1690119
[2026-03-13 10:01:35] 2026-03-13 14:01:34,298 [wrapper] Pilot exit status: 0
[2026-03-13 10:01:35] 2026-03-13 14:01:34,437 [wrapper] pandaids: 7051881705
[2026-03-13 10:01:35] 2026-03-13 14:01:34,812 [wrapper] cleanup supervisor_pilot  402795 1690121
[2026-03-13 10:01:35] 2026-03-13 14:01:34,815 [wrapper] Test setup, not cleaning
[2026-03-13 10:01:35] 2026-03-13 14:01:34,817 [wrapper] apfmon messages muted
[2026-03-13 10:01:35] 2026-03-13 14:01:34,818 [wrapper] ==== wrapper stdout END ====
[2026-03-13 10:01:35] 2026-03-13 14:01:34,820 [wrapper] ==== wrapper stderr END ====
[2026-03-13 10:01:35]  *** Error codes and diagnostics ***
[2026-03-13 10:01:35]     "exeErrorCode": 0,
[2026-03-13 10:01:35]     "exeErrorDiag": "",
[2026-03-13 10:01:35]     "pilotErrorCode": 0,
[2026-03-13 10:01:35]     "pilotErrorDiag": "",
[2026-03-13 10:01:35]  *** Listing of results directory ***
[2026-03-13 10:01:35] total 430392
[2026-03-13 10:01:35] -rw-r--r--. 1 boincer umatlas      5111 Mar 12 11:14 queuedata.json
[2026-03-13 10:01:35] -rw-r--r--. 1 boincer umatlas    585013 Mar 12 11:14 pilot3.tar.gz
[2026-03-13 10:01:35] -rwx------. 1 boincer umatlas     36322 Mar 12 11:14 runpilot2-wrapper.sh
[2026-03-13 10:01:35] -rw-r--r--. 1 boincer umatlas       100 Mar 13 04:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 10:01:35] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 13 04:53 run_atlas
[2026-03-13 10:01:35] -rw-r--r--. 1 boincer umatlas       105 Mar 13 04:53 job.xml
[2026-03-13 10:01:35] -rw-r--r--. 2 boincer umatlas 218075416 Mar 13 04:53 EVNT.48967092._000320.pool.root.1
[2026-03-13 10:01:35] -rw-r--r--. 2 boincer umatlas     15845 Mar 13 04:53 start_atlas.sh
[2026-03-13 10:01:35] drwxrwx--x. 2 boincer umatlas      4096 Mar 13 04:53 shared
[2026-03-13 10:01:35] -rw-r--r--. 2 boincer umatlas    597532 Mar 13 04:53 input.tar.gz
[2026-03-13 10:01:35] -rw-r--r--. 1 boincer umatlas         0 Mar 13 04:53 boinc_lockfile
[2026-03-13 10:01:35] -rw-r--r--. 1 boincer umatlas      2597 Mar 13 04:53 pandaJob.out
[2026-03-13 10:01:35] -rw-------. 1 boincer umatlas        57 Mar 13 04:54 setup.sh.local
[2026-03-13 10:01:35] -rw-------. 1 boincer umatlas   1006487 Mar 13 04:54 agis_schedconf.cvmfs.json
[2026-03-13 10:01:35] -rw-------. 1 boincer umatlas       430 Mar 13 04:54 workernode_map.json
[2026-03-13 10:01:35] drwx------. 5 boincer umatlas      4096 Mar 13 04:54 pilot3
[2026-03-13 10:01:35] -rw-r--r--. 1 boincer umatlas      6957 Mar 13 09:58 init_data.xml
[2026-03-13 10:01:35] -rw-------. 1 boincer umatlas 213476320 Mar 13 09:59 HITS.48967094._007842.pool.root.1
[2026-03-13 10:01:35] -rw-r--r--. 1 boincer umatlas       530 Mar 13 09:59 boinc_task_state.xml
[2026-03-13 10:01:35] -rw-------. 1 boincer umatlas      1037 Mar 13 10:00 memory_monitor_summary.json
[2026-03-13 10:01:35] -rw-------. 1 boincer umatlas        95 Mar 13 10:00 pilot_heartbeat.json
[2026-03-13 10:01:35] -rw-------. 1 boincer umatlas   1511578 Mar 13 10:00 agis_ddmendpoints.agis.ALL.json
[2026-03-13 10:01:35] -rw-------. 1 boincer umatlas    484083 Mar 13 10:00 log.48967094._007842.job.log.tgz.1
[2026-03-13 10:01:35] -rw-------. 1 boincer umatlas      6334 Mar 13 10:00 heartbeat.json
[2026-03-13 10:01:35] -rw-r--r--. 1 boincer umatlas      8192 Mar 13 10:01 boinc_mmap_file
[2026-03-13 10:01:35] -rw-r--r--. 1 boincer umatlas        28 Mar 13 10:01 wrapper_checkpoint.txt
[2026-03-13 10:01:35] -rw-------. 1 boincer umatlas      5007 Mar 13 10:01 pilotlog.txt
[2026-03-13 10:01:35] -rw-------. 1 boincer umatlas   2126473 Mar 13 10:01 log.48967094._007842.job.log.1
[2026-03-13 10:01:35] -rw-------. 1 boincer umatlas       357 Mar 13 10:01 output.list
[2026-03-13 10:01:35] -rw-r--r--. 1 boincer umatlas       620 Mar 13 10:01 runtime_log
[2026-03-13 10:01:35] -rw-------. 1 boincer umatlas   2631680 Mar 13 10:01 result.tar.gz
[2026-03-13 10:01:35] -rw-------. 1 boincer umatlas       656 Mar 13 10:01 u5oMDmwuwK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmd6mLDmvFiWDn.diag
[2026-03-13 10:01:35] -rw-r--r--. 1 boincer umatlas      9342 Mar 13 10:01 runtime_log.err
[2026-03-13 10:01:35] -rw-r--r--. 1 boincer umatlas     21355 Mar 13 10:01 stderr.txt
[2026-03-13 10:01:35] HITS file was successfully produced:
[2026-03-13 10:01:35] -rw-------. 1 boincer umatlas 213476320 Mar 13 09:59 shared/HITS.pool.root.1
[2026-03-13 10:01:35]  *** Contents of shared directory: ***
[2026-03-13 10:01:35] total 424620
[2026-03-13 10:01:35] -rw-r--r--. 2 boincer umatlas 218075416 Mar 13 04:53 ATLAS.root_0
[2026-03-13 10:01:35] -rw-r--r--. 2 boincer umatlas     15845 Mar 13 04:53 start_atlas.sh
[2026-03-13 10:01:35] -rw-r--r--. 2 boincer umatlas    597532 Mar 13 04:53 input.tar.gz
[2026-03-13 10:01:35] -rw-------. 1 boincer umatlas 213476320 Mar 13 09:59 HITS.pool.root.1
[2026-03-13 10:01:35] -rw-------. 1 boincer umatlas   2631680 Mar 13 10:01 result.tar.gz
10:01:37 (1674752): run_atlas exited; CPU time 38891.324290
10:01:37 (1674752): called boinc_finish(0)

</stderr_txt>
]]>

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