Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:18:53 (3935092): wrapper (7.7.26015): starting
19:18:53 (3935092): wrapper: running run_atlas (--nthreads 4)
[2026-03-13 19:18:53] Arguments: --nthreads 4
[2026-03-13 19:18:53] Threads: 4
[2026-03-13 19:18:53] Checking for CVMFS
[2026-03-13 19:18:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 19:18:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 19:18:53] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 19:18:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 19:18:53] 2.9.2.0 55405 23319 104676 157250 0 49 34900027 36864000 0 130560 0 10564769 99.984 883242 8702 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-13 19:18:53] CVMFS is ok
[2026-03-13 19:18:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 19:18:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 19:18:53] Further information can be found at the LHC@home message board.
[2026-03-13 19:18:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 19:18:53] Checking for apptainer binary...
[2026-03-13 19:18:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 19:18:53] Running /usr/bin/apptainer --version
[2026-03-13 19:18:53] apptainer version 1.4.1-1.1
[2026-03-13 19:18:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 19:18:53] magicA250
[2026-03-13 19:18:53] apptainer works
[2026-03-13 19:18:53] Set ATHENA_PROC_NUMBER=4
[2026-03-13 19:18:53] Set ATHENA_CORE_NUMBER=4
[2026-03-13 19:18:53] Starting ATLAS job with PandaID=7043271568
[2026-03-13 19:18:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 20:26:16]  *** The last 200 lines of the pilot log: ***
[2026-03-13 20:26:16] 2026-03-13 19:25:29,764 | INFO     | [job] job monitor thread has finished
[2026-03-13 20:26:16] 2026-03-13 19:25:29,854 | INFO     | [data] copytool_out thread has finished
[2026-03-13 20:26:16] 2026-03-13 19:25:30,050 | INFO     | [payload] control thread has finished
[2026-03-13 20:26:16] 2026-03-13 19:25:30,232 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 20:26:16] 2026-03-13 19:25:30,424 | INFO     | [payload] failed_post thread has finished
[2026-03-13 20:26:16] 2026-03-13 19:25:30,526 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 20:26:16] 2026-03-13 19:25:34,533 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 20:26:16] 2026-03-13 19:25:38,580 | INFO     | job.realtimelogging is not enabled
[2026-03-13 20:26:16] 2026-03-13 19:25:39,585 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 20:26:16] 2026-03-13 19:25:57,740 | INFO     | 3986s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-13 20:26:16] 2026-03-13 19:25:58,801 | INFO     | PID=3939223 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-13 20:26:16] 2026-03-13 19:25:58,801 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 20:26:16] 2026-03-13 19:25:58,801 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 20:26:16] 2026-03-13 19:25:58,801 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 20:26:16] 2026-03-13 19:26:11,136 | INFO     | [monitor] cgroup control has ended
[2026-03-13 20:26:16] 2026-03-13 19:26:11,309 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140197852485440)>', '<ExcThread(monitor, started 140196951598848)>']
[2026-03-13 20:26:16] 2026-03-13 19:26:11,871 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 20:26:16] 2026-03-13 19:26:11,871 | INFO     | [monitor] control thread has ended
[2026-03-13 20:26:16] 2026-03-13 19:26:16,325 | INFO     | all workflow threads have been joined
[2026-03-13 20:26:16] 2026-03-13 19:26:16,326 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 20:26:16] 2026-03-13 19:26:16,326 | INFO     | traces error code: 0
[2026-03-13 20:26:16] 2026-03-13 19:26:16,326 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 20:26:16] 2026-03-13 19:26:16,403 [wrapper] ==== pilot stdout END ====
[2026-03-13 20:26:16] 2026-03-13 19:26:16,407 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 20:26:16] 2026-03-13 19:26:16,411 [wrapper] pilotpid: 3939223
[2026-03-13 20:26:16] 2026-03-13 19:26:16,416 [wrapper] Pilot exit status: 0
[2026-03-13 20:26:16] 2026-03-13 19:26:16,428 [wrapper] pandaids: 7043271568
[2026-03-13 20:26:16] 2026-03-13 19:26:16,451 [wrapper] cleanup supervisor_pilot 3949090 3939224
[2026-03-13 20:26:16] 2026-03-13 19:26:16,455 [wrapper] Test setup, not cleaning
[2026-03-13 20:26:16] 2026-03-13 19:26:16,459 [wrapper] apfmon messages muted
[2026-03-13 20:26:16] 2026-03-13 19:26:16,463 [wrapper] ==== wrapper stdout END ====
[2026-03-13 20:26:16] 2026-03-13 19:26:16,467 [wrapper] ==== wrapper stderr END ====
[2026-03-13 20:26:16]  *** Error codes and diagnostics ***
[2026-03-13 20:26:16]     "exeErrorCode": 0,
[2026-03-13 20:26:16]     "exeErrorDiag": "",
[2026-03-13 20:26:16]     "pilotErrorCode": 0,
[2026-03-13 20:26:16]     "pilotErrorDiag": "",
[2026-03-13 20:26:16]  *** Listing of results directory ***
[2026-03-13 20:26:16] total 611032
[2026-03-13 20:26:16] -rw-r--r-- 1 boinc boinc    585013 Mar 12 13:54 pilot3.tar.gz
[2026-03-13 20:26:16] -rwx------ 1 boinc boinc     36322 Mar 12 13:57 runpilot2-wrapper.sh
[2026-03-13 20:26:16] -rw-r--r-- 1 boinc boinc      5111 Mar 12 13:59 queuedata.json
[2026-03-13 20:26:16] -rw-r--r-- 1 boinc boinc       100 Mar 13 19:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 20:26:16] -rwxr-xr-x 1 boinc boinc      7986 Mar 13 19:18 run_atlas
[2026-03-13 20:26:16] -rw-r--r-- 1 boinc boinc       105 Mar 13 19:18 job.xml
[2026-03-13 20:26:16] -rw-r--r-- 2 boinc boinc 436190746 Mar 13 19:18 EVNT.46701403._000907.pool.root.1
[2026-03-13 20:26:16] -rw-r--r-- 2 boinc boinc    597533 Mar 13 19:18 input.tar.gz
[2026-03-13 20:26:16] -rw-r--r-- 2 boinc boinc     15845 Mar 13 19:18 start_atlas.sh
[2026-03-13 20:26:16] drwxrwx--x 2 boinc boinc      4096 Mar 13 19:18 shared
[2026-03-13 20:26:16] -rw-r--r-- 1 boinc boinc         0 Mar 13 19:18 boinc_setup_complete
[2026-03-13 20:26:16] -rw-r--r-- 1 boinc boinc      6378 Mar 13 19:18 init_data.xml
[2026-03-13 20:26:16] -rw-r--r-- 1 boinc boinc         0 Mar 13 19:18 boinc_lockfile
[2026-03-13 20:26:16] -rw-r--r-- 1 boinc boinc      2564 Mar 13 19:18 pandaJob.out
[2026-03-13 20:26:16] -rw------- 1 boinc boinc   1006643 Mar 13 19:19 agis_schedconf.cvmfs.json
[2026-03-13 20:26:16] -rw------- 1 boinc boinc   1511579 Mar 13 19:19 agis_ddmendpoints.agis.ALL.json
[2026-03-13 20:26:16] -rw------- 1 boinc boinc       430 Mar 13 19:19 workernode_map.json
[2026-03-13 20:26:16] drwx------ 5 boinc boinc      4096 Mar 13 19:19 pilot3
[2026-03-13 20:26:16] -rw------- 1 boinc boinc 183876505 Mar 13 20:25 HITS.48955006._045794.pool.root.1
[2026-03-13 20:26:16] -rw-r--r-- 1 boinc boinc       530 Mar 13 20:25 boinc_task_state.xml
[2026-03-13 20:26:16] -rw------- 1 boinc boinc      1025 Mar 13 20:25 memory_monitor_summary.json
[2026-03-13 20:26:16] -rw------- 1 boinc boinc        95 Mar 13 20:25 pilot_heartbeat.json
[2026-03-13 20:26:16] -rw------- 1 boinc boinc    258819 Mar 13 20:25 log.48955006._045794.job.log.tgz.1
[2026-03-13 20:26:16] -rw------- 1 boinc boinc      6332 Mar 13 20:25 heartbeat.json
[2026-03-13 20:26:16] -rw-r--r-- 1 boinc boinc      8192 Mar 13 20:25 boinc_mmap_file
[2026-03-13 20:26:16] -rw-r--r-- 1 boinc boinc        27 Mar 13 20:25 wrapper_checkpoint.txt
[2026-03-13 20:26:16] -rw------- 1 boinc boinc      4935 Mar 13 20:26 pilotlog.txt
[2026-03-13 20:26:16] -rw------- 1 boinc boinc    594630 Mar 13 20:26 log.48955006._045794.job.log.1
[2026-03-13 20:26:16] -rw------- 1 boinc boinc       357 Mar 13 20:26 output.list
[2026-03-13 20:26:16] -rw-r--r-- 1 boinc boinc       620 Mar 13 20:26 runtime_log
[2026-03-13 20:26:16] -rw------- 1 boinc boinc    870400 Mar 13 20:26 result.tar.gz
[2026-03-13 20:26:16] -rw-r--r-- 1 boinc boinc      8911 Mar 13 20:26 runtime_log.err
[2026-03-13 20:26:16] -rw------- 1 boinc boinc       660 Mar 13 20:26 Im0KDmMmuK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmpEkLDmGZIOGn.diag
[2026-03-13 20:26:16] -rw-r--r-- 1 boinc boinc      5785 Mar 13 20:26 stderr.txt
[2026-03-13 20:26:16] HITS file was successfully produced:
[2026-03-13 20:26:16] -rw------- 1 boinc boinc 183876505 Mar 13 20:25 shared/HITS.pool.root.1
[2026-03-13 20:26:16]  *** Contents of shared directory: ***
[2026-03-13 20:26:16] total 606996
[2026-03-13 20:26:16] -rw-r--r-- 2 boinc boinc 436190746 Mar 13 19:18 ATLAS.root_0
[2026-03-13 20:26:16] -rw-r--r-- 2 boinc boinc    597533 Mar 13 19:18 input.tar.gz
[2026-03-13 20:26:16] -rw-r--r-- 2 boinc boinc     15845 Mar 13 19:18 start_atlas.sh
[2026-03-13 20:26:16] -rw------- 1 boinc boinc 183876505 Mar 13 20:25 HITS.pool.root.1
[2026-03-13 20:26:16] -rw------- 1 boinc boinc    870400 Mar 13 20:26 result.tar.gz
20:26:17 (3935092): run_atlas exited; CPU time 14791.677918
20:26:17 (3935092): called boinc_finish(0)

</stderr_txt>
]]>

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