Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:25:56 (4158009): wrapper (7.7.26015): starting
09:25:56 (4158009): wrapper: running run_atlas (--nthreads 4)
[2026-03-14 09:25:56] Arguments: --nthreads 4
[2026-03-14 09:25:56] Threads: 4
[2026-03-14 09:25:56] Checking for CVMFS
[2026-03-14 09:25:56] No cvmfs_config command found, will try listing directly
[2026-03-14 09:25:56] CVMFS is ok
[2026-03-14 09:25:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 09:25:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 09:25:56] Further information can be found at the LHC@home message board.
[2026-03-14 09:25:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 09:25:56] Checking for apptainer binary...
[2026-03-14 09:25:56] which: no apptainer in ((null))
[2026-03-14 09:25:56] apptainer is not installed, using version from CVMFS
[2026-03-14 09:25:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 09:25:56] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot216/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-14 09:25:56] apptainer works
[2026-03-14 09:25:56] Set ATHENA_PROC_NUMBER=4
[2026-03-14 09:25:56] Set ATHENA_CORE_NUMBER=4
[2026-03-14 09:25:56] Starting ATLAS job with PandaID=7051463896
[2026-03-14 09:25:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot216/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 12:21:03]  *** The last 200 lines of the pilot log: ***
[2026-03-14 12:21:03] 2026-03-14 11:20:01,708 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 12:21:03] 2026-03-14 11:20:01,708 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 12:21:03] 2026-03-14 11:20:01,708 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 12:21:03] 2026-03-14 11:20:01,709 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 12:21:03] 2026-03-14 11:20:01,710 | INFO     | fitting pss+swap vs Time
[2026-03-14 12:21:03] 2026-03-14 11:20:01,711 | INFO     | sum of square deviations: 1550429070.0
[2026-03-14 12:21:03] 2026-03-14 11:20:01,711 | INFO     | sum of deviations: 19471854164.000004
[2026-03-14 12:21:03] 2026-03-14 11:20:01,711 | INFO     | mean x: 1773481980.0
[2026-03-14 12:21:03] 2026-03-14 11:20:01,711 | INFO     | mean y: 2324393.847953216
[2026-03-14 12:21:03] 2026-03-14 11:20:01,711 | INFO     | intersect: -22270853492.99467
[2026-03-14 12:21:03] 2026-03-14 11:20:01,711 | INFO     | chi2: 1.097983259415352
[2026-03-14 12:21:03] 2026-03-14 11:20:01,712 | INFO     | sum of square deviations: 1418361477.5
[2026-03-14 12:21:03] 2026-03-14 11:20:01,712 | INFO     | sum of deviations: 18843580607.500004
[2026-03-14 12:21:03] 2026-03-14 11:20:01,712 | INFO     | mean x: 1773481827.5
[2026-03-14 12:21:03] 2026-03-14 11:20:01,712 | INFO     | mean y: 2323668.234939759
[2026-03-14 12:21:03] 2026-03-14 11:20:01,712 | INFO     | intersect: -23559193126.01448
[2026-03-14 12:21:03] 2026-03-14 11:20:01,712 | INFO     | chi2: 1.098586523418481
[2026-03-14 12:21:03] 2026-03-14 11:20:01,712 | INFO     | current chi2=1.098586523418481 (change=-0.054942914471234054 %)
[2026-03-14 12:21:03] 2026-03-14 11:20:01,712 | INFO     | right removable region: 165
[2026-03-14 12:21:03] 2026-03-14 11:20:01,713 | INFO     | sum of square deviations: 1418361477.5
[2026-03-14 12:21:03] 2026-03-14 11:20:01,713 | INFO     | sum of deviations: 2262887293.0
[2026-03-14 12:21:03] 2026-03-14 11:20:01,713 | INFO     | mean x: 1773482132.5
[2026-03-14 12:21:03] 2026-03-14 11:20:01,713 | INFO     | mean y: 2343917.5421686745
[2026-03-14 12:21:03] 2026-03-14 11:20:01,713 | INFO     | intersect: -2827111228.878214
[2026-03-14 12:21:03] 2026-03-14 11:20:01,713 | INFO     | chi2: 0.0008981847023270432
[2026-03-14 12:21:03] 2026-03-14 11:20:01,713 | INFO     | current chi2=0.0008981847023270432 (change=99.91819686733609 %)
[2026-03-14 12:21:03] 2026-03-14 11:20:01,713 | INFO     | sum of square deviations: 1294014960.0
[2026-03-14 12:21:03] 2026-03-14 11:20:01,714 | INFO     | sum of deviations: 1673234208.9999998
[2026-03-14 12:21:03] 2026-03-14 11:20:01,714 | INFO     | mean x: 1773482285.0
[2026-03-14 12:21:03] 2026-03-14 11:20:01,714 | INFO     | mean y: 2344637.6894409936
[2026-03-14 12:21:03] 2026-03-14 11:20:01,714 | INFO     | intersect: -2290867821.243404
[2026-03-14 12:21:03] 2026-03-14 11:20:01,714 | INFO     | chi2: 0.0006152292195490582
[2026-03-14 12:21:03] 2026-03-14 11:20:01,714 | INFO     | current chi2=0.0006152292195490582 (change=31.503039635934087 %)
[2026-03-14 12:21:03] 2026-03-14 11:20:01,714 | INFO     | sum of square deviations: 1177156955.0
[2026-03-14 12:21:03] 2026-03-14 11:20:01,715 | INFO     | sum of deviations: 1342501755.5
[2026-03-14 12:21:03] 2026-03-14 11:20:01,715 | INFO     | mean x: 1773482437.5
[2026-03-14 12:21:03] 2026-03-14 11:20:01,715 | INFO     | mean y: 2345066.7243589745
[2026-03-14 12:21:03] 2026-03-14 11:20:01,715 | INFO     | intersect: -2020242724.6311011
[2026-03-14 12:21:03] 2026-03-14 11:20:01,715 | INFO     | chi2: 0.0005219776734516722
[2026-03-14 12:21:03] 2026-03-14 11:20:01,715 | INFO     | current chi2=0.0005219776734516722 (change=15.157203711120248 %)
[2026-03-14 12:21:03] 2026-03-14 11:20:01,715 | INFO     | left removable region: 30
[2026-03-14 12:21:03] 2026-03-14 11:20:01,715 | INFO     | sum of square deviations: 762879420.0
[2026-03-14 12:21:03] 2026-03-14 11:20:01,716 | INFO     | sum of deviations: 1164777675.9999998
[2026-03-14 12:21:03] 2026-03-14 11:20:01,716 | INFO     | mean x: 1773482712.0
[2026-03-14 12:21:03] 2026-03-14 11:20:01,716 | INFO     | mean y: 2345065.562962963
[2026-03-14 12:21:03] 2026-03-14 11:20:01,716 | INFO     | intersect: -2705439438.1919513
[2026-03-14 12:21:03] 2026-03-14 11:20:01,716 | INFO     | chi2: 0.00045648287444601915
[2026-03-14 12:21:03] 2026-03-14 11:20:01,716 | INFO     | current memory leak: 1.53 B/s (using 135 data points, chi2=0.00)
[2026-03-14 12:21:03] 2026-03-14 11:20:01,716 | INFO     | could have reported an average CPU frequency of 3525 MHz (9 samples)
[2026-03-14 12:21:03] 2026-03-14 11:20:01,716 | INFO     | ..............................
[2026-03-14 12:21:03] 2026-03-14 11:20:01,716 | INFO     | . Timing measurements:
[2026-03-14 12:21:03] 2026-03-14 11:20:01,716 | INFO     | . get job = 0 s
[2026-03-14 12:21:03] 2026-03-14 11:20:01,716 | INFO     | . initial setup = 6 s
[2026-03-14 12:21:03] 2026-03-14 11:20:01,716 | INFO     | . payload setup = 5 s
[2026-03-14 12:21:03] 2026-03-14 11:20:01,716 | INFO     | . stage-in = 0 s
[2026-03-14 12:21:03] 2026-03-14 11:20:01,716 | INFO     | . payload execution = 10404 s
[2026-03-14 12:21:03] 2026-03-14 11:20:01,716 | INFO     | . stage-out = 0 s
[2026-03-14 12:21:03] 2026-03-14 11:20:01,716 | INFO     | . log creation = 0 s
[2026-03-14 12:21:03] 2026-03-14 11:20:01,716 | INFO     | ..............................
[2026-03-14 12:21:03] 2026-03-14 11:20:01,763 | INFO     | 
[2026-03-14 12:21:03] 2026-03-14 11:20:01,764 | INFO     | job summary report
[2026-03-14 12:21:03] 2026-03-14 11:20:01,764 | INFO     | --------------------------------------------------
[2026-03-14 12:21:03] 2026-03-14 11:20:01,764 | INFO     | PanDA job id: 7051463896
[2026-03-14 12:21:03] 2026-03-14 11:20:01,764 | INFO     | task id: 48967076
[2026-03-14 12:21:03] 2026-03-14 11:20:01,764 | INFO     | errors: (none)
[2026-03-14 12:21:03] 2026-03-14 11:20:01,764 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 12:21:03] 2026-03-14 11:20:01,764 | INFO     | pilot state: finished 
[2026-03-14 12:21:03] 2026-03-14 11:20:01,764 | INFO     | transexitcode: 0
[2026-03-14 12:21:03] 2026-03-14 11:20:01,764 | INFO     | exeerrorcode: 0
[2026-03-14 12:21:03] 2026-03-14 11:20:01,764 | INFO     | exeerrordiag: 
[2026-03-14 12:21:03] 2026-03-14 11:20:01,764 | INFO     | exitcode: 0
[2026-03-14 12:21:03] 2026-03-14 11:20:01,764 | INFO     | exitmsg: OK
[2026-03-14 12:21:03] 2026-03-14 11:20:01,764 | INFO     | cpuconsumptiontime: 40224 s
[2026-03-14 12:21:03] 2026-03-14 11:20:01,764 | INFO     | nevents: 400
[2026-03-14 12:21:03] 2026-03-14 11:20:01,764 | INFO     | neventsw: 0
[2026-03-14 12:21:03] 2026-03-14 11:20:01,764 | INFO     | pid: 4168633
[2026-03-14 12:21:03] 2026-03-14 11:20:01,764 | INFO     | pgrp: 4168633
[2026-03-14 12:21:03] 2026-03-14 11:20:01,764 | INFO     | corecount: 4
[2026-03-14 12:21:03] 2026-03-14 11:20:01,764 | INFO     | event service: False
[2026-03-14 12:21:03] 2026-03-14 11:20:01,764 | INFO     | sizes: {0: 2280225, 11: 2280225, 10413: 2308959, 10414: 2317981, 10415: 2318037, 10417: 2318295}
[2026-03-14 12:21:03] 2026-03-14 11:20:01,764 | INFO     | --------------------------------------------------
[2026-03-14 12:21:03] 2026-03-14 11:20:01,764 | INFO     | 
[2026-03-14 12:21:03] 2026-03-14 11:20:01,764 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot216/slots/0
[2026-03-14 12:21:03] 2026-03-14 11:20:01,785 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 12:21:03] 2026-03-14 11:20:01,785 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 12:21:03] 2026-03-14 11:20:01,785 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 12:21:03] 2026-03-14 11:20:01,785 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 12:21:03] 2026-03-14 11:20:01,785 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 12:21:03] 2026-03-14 11:20:01,785 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 12:21:03] 2026-03-14 11:20:01,785 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 12:21:03] 2026-03-14 11:20:01,785 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 12:21:03] 2026-03-14 11:20:01,785 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 12:21:03] 2026-03-14 11:20:01,785 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 12:21:03] 2026-03-14 11:20:01,785 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 12:21:03] 2026-03-14 11:20:01,785 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 12:21:03] 2026-03-14 11:20:01,786 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 12:21:03] 2026-03-14 11:20:01,786 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 12:21:03] 2026-03-14 11:20:01,786 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 12:21:03] 2026-03-14 11:20:01,786 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 12:21:03] 2026-03-14 11:20:01,786 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 12:21:03] 2026-03-14 11:20:01,786 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 12:21:03] 2026-03-14 11:20:01,786 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 12:21:03] 2026-03-14 11:20:01,786 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 12:21:03] 2026-03-14 11:20:01,786 | INFO     | job 7051463896 has completed (purged errors)
[2026-03-14 12:21:03] 2026-03-14 11:20:01,786 | INFO     | overall cleanup function is called
[2026-03-14 12:21:03] 2026-03-14 11:20:02,788 | INFO     | --- collectZombieJob: --- 10, [4168633]
[2026-03-14 12:21:03] 2026-03-14 11:20:02,788 | INFO     | zombie collector waiting for pid 4168633
[2026-03-14 12:21:03] 2026-03-14 11:20:02,789 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 12:21:03] 2026-03-14 11:20:02,789 | INFO     | collected zombie processes
[2026-03-14 12:21:03] 2026-03-14 11:20:02,789 | INFO     | will attempt to kill all subprocesses of pid=4168633
[2026-03-14 12:21:03] 2026-03-14 11:20:03,514 | INFO     | process IDs to be killed: [4168633] (in reverse order)
[2026-03-14 12:21:03] 2026-03-14 11:20:03,748 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 12:21:03] 2026-03-14 11:20:03,748 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 12:21:03] 2026-03-14 11:20:03,803 | INFO     | did not find any defunct processes belonging to 4168633
[2026-03-14 12:21:03] 2026-03-14 11:20:03,854 | INFO     | did not find any defunct processes belonging to 4168633
[2026-03-14 12:21:03] 2026-03-14 11:20:03,855 | INFO     | ready for new job
[2026-03-14 12:21:03] 2026-03-14 11:20:03,855 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 12:21:03] 2026-03-14 11:20:03,856 | INFO     | **************************************
[2026-03-14 12:21:03] 2026-03-14 11:20:03,856 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 12:21:03] 2026-03-14 11:20:03,856 | INFO     | **************************************
[2026-03-14 12:21:03] 2026-03-14 11:20:03,856 | INFO     | 
[2026-03-14 12:21:03] 2026-03-14 11:20:03,864 | INFO     | architecture information:
[2026-03-14 12:21:03] 2026-03-14 11:20:03,864 | INFO     | executing command: cat /etc/os-release
[2026-03-14 12:21:03] 2026-03-14 11:20:03,876 | INFO     | cat /etc/os-release:
[2026-03-14 12:21:03] NAME="CentOS Linux"
[2026-03-14 12:21:03] VERSION="7 (Core)"
[2026-03-14 12:21:03] ID="centos"
[2026-03-14 12:21:03] ID_LIKE="rhel fedora"
[2026-03-14 12:21:03] VERSION_ID="7"
[2026-03-14 12:21:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 12:21:03] ANSI_COLOR="0;31"
[2026-03-14 12:21:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 12:21:03] HOME_URL="https://www.centos.org/"
[2026-03-14 12:21:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 12:21:03] 
[2026-03-14 12:21:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 12:21:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 12:21:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 12:21:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 12:21:03] 
[2026-03-14 12:21:03] 2026-03-14 11:20:03,876 | INFO     | **************************************
[2026-03-14 12:21:03] 2026-03-14 11:20:03,907 | WARNING  | process 4168633 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 12:21:03] 2026-03-14 11:20:04,239 | INFO     | using path: /var/lib/boinc/var/slot216/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 12:21:03] 2026-03-14 11:20:04,379 | INFO     | executing command: df -mP /var/lib/boinc/var/slot216/slots/0
[2026-03-14 12:21:03] 2026-03-14 11:20:04,396 | INFO     | sufficient remaining disk space (19823329280 B)
[2026-03-14 12:21:03] 2026-03-14 11:20:04,396 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 12:21:03] 2026-03-14 11:20:04,396 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 12:21:03] 2026-03-14 11:20:04,396 | INFO     | update_server=False
[2026-03-14 12:21:03] 2026-03-14 11:20:04,396 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 12:21:03] 2026-03-14 11:20:04,397 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 12:21:03] 2026-03-14 11:20:04,397 | INFO     | all payload control threads have been joined
[2026-03-14 12:21:03] 2026-03-14 11:20:04,670 | INFO     | number of running child processes to parent process 4168633: 1
[2026-03-14 12:21:03] 2026-03-14 11:20:04,671 | INFO     | maximum number of monitored processes: 6
[2026-03-14 12:21:03] 2026-03-14 11:20:04,671 | INFO     | aborting job monitoring since job object (job id=7051463896) has expired
[2026-03-14 12:21:03] 2026-03-14 11:20:04,671 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 12:21:03] 2026-03-14 11:20:04,671 | INFO     | will abort loop
[2026-03-14 12:21:03] 2026-03-14 11:20:05,402 | INFO     | [job] retrieve thread has finished
[2026-03-14 12:21:03] 2026-03-14 11:20:05,403 | INFO     | [payload] control thread has finished
[2026-03-14 12:21:03] 2026-03-14 11:20:05,404 | INFO     | all data control threads have been joined
[2026-03-14 12:21:03] 2026-03-14 11:20:05,501 | INFO     | all job control threads have been joined
[2026-03-14 12:21:03] 2026-03-14 11:20:05,676 | INFO     | [job] job monitor thread has finished
[2026-03-14 12:21:03] 2026-03-14 11:20:05,695 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 12:21:03] 2026-03-14 11:20:05,699 | INFO     | [data] copytool_in thread has finished
[2026-03-14 12:21:03] 2026-03-14 11:20:05,744 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 12:21:03] 2026-03-14 11:20:06,304 | INFO     | [payload] validate_post thread has finished
[2026-03-14 12:21:03] 2026-03-14 11:20:06,402 | INFO     | [data] copytool_out thread has finished
[2026-03-14 12:21:03] 2026-03-14 11:20:06,410 | INFO     | [data] control thread has finished
[2026-03-14 12:21:03] 2026-03-14 11:20:06,437 | INFO     | [job] validate thread has finished
[2026-03-14 12:21:03] 2026-03-14 11:20:06,449 | INFO     | [payload] failed_post thread has finished
[2026-03-14 12:21:03] 2026-03-14 11:20:06,507 | INFO     | [job] control thread has finished
[2026-03-14 12:21:03] 2026-03-14 11:20:06,764 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 12:21:03] 2026-03-14 11:20:06,774 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 12:21:03] 2026-03-14 11:20:06,801 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 12:21:03] 2026-03-14 11:20:07,779 | INFO     | [job] queue monitor thread has finished
[2026-03-14 12:21:03] 2026-03-14 11:20:09,701 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 12:21:03] 2026-03-14 11:20:15,371 | INFO     | job.realtimelogging is not enabled
[2026-03-14 12:21:03] 2026-03-14 11:20:16,376 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 12:21:03] 2026-03-14 11:20:30,115 | INFO     | [monitor] cgroup control has ended
[2026-03-14 12:21:03] 2026-03-14 11:20:30,147 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23376007513920)>', '<ExcThread(monitor, started 23375769777920)>']
[2026-03-14 12:21:03] 2026-03-14 11:20:33,756 | INFO     | PID=4162649 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 12:21:03] 2026-03-14 11:20:33,756 | INFO     | .. there are 46 such processes running
[2026-03-14 12:21:03] 2026-03-14 11:20:33,757 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 12:21:03] 2026-03-14 11:20:33,757 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 12:21:03] 2026-03-14 11:20:33,757 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 12:21:03] 2026-03-14 11:20:33,757 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 12:21:03] 2026-03-14 11:20:33,757 | INFO     | [monitor] control thread has ended
[2026-03-14 12:21:03] 2026-03-14 11:20:35,172 | INFO     | all workflow threads have been joined
[2026-03-14 12:21:03] 2026-03-14 11:20:35,172 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 12:21:03] 2026-03-14 11:20:35,172 | INFO     | traces error code: 0
[2026-03-14 12:21:03] 2026-03-14 11:20:35,172 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 12:21:03] 2026-03-14 11:20:35,363 [wrapper] ==== pilot stdout END ====
[2026-03-14 12:21:03] 2026-03-14 11:20:35,366 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 12:21:03] 2026-03-14 11:20:35,368 [wrapper] pilotpid: 4162649
[2026-03-14 12:21:03] 2026-03-14 11:20:35,369 [wrapper] Pilot exit status: 0
[2026-03-14 12:21:03] 2026-03-14 11:20:35,376 [wrapper] pandaids: 7051463896
[2026-03-14 12:21:03] 2026-03-14 11:20:35,508 [wrapper] cleanup supervisor_pilot 1259313 4162650
[2026-03-14 12:21:03] 2026-03-14 11:20:35,511 [wrapper] Test setup, not cleaning
[2026-03-14 12:21:03] 2026-03-14 11:20:35,513 [wrapper] apfmon messages muted
[2026-03-14 12:21:03] 2026-03-14 11:20:35,516 [wrapper] ==== wrapper stdout END ====
[2026-03-14 12:21:03] 2026-03-14 11:20:35,518 [wrapper] ==== wrapper stderr END ====
[2026-03-14 12:21:03]  *** Error codes and diagnostics ***
[2026-03-14 12:21:03]     "exeErrorCode": 0,
[2026-03-14 12:21:03]     "exeErrorDiag": "",
[2026-03-14 12:21:03]     "pilotErrorCode": 0,
[2026-03-14 12:21:03]     "pilotErrorDiag": "",
[2026-03-14 12:21:03]  *** Listing of results directory ***
[2026-03-14 12:21:03] total 486324
[2026-03-14 12:21:03] -rw-r--r--. 1 boinc boinc    585013 Mar 12 08:36 pilot3.tar.gz
[2026-03-14 12:21:03] -rwx------. 1 boinc boinc     36322 Mar 12 08:41 runpilot2-wrapper.sh
[2026-03-14 12:21:03] -rw-r--r--. 1 boinc boinc      5111 Mar 12 08:42 queuedata.json
[2026-03-14 12:21:03] -rw-r--r--. 1 boinc boinc       100 Mar 14 09:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 12:21:03] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 09:25 run_atlas
[2026-03-14 12:21:03] -rw-r--r--. 1 boinc boinc       105 Mar 14 09:25 job.xml
[2026-03-14 12:21:03] -rw-r--r--. 2 boinc boinc 229125598 Mar 14 09:25 EVNT.48967074._000022.pool.root.1
[2026-03-14 12:21:03] -rw-r--r--. 2 boinc boinc     15845 Mar 14 09:25 start_atlas.sh
[2026-03-14 12:21:03] drwxrwx--x. 2 boinc boinc      4096 Mar 14 09:25 shared
[2026-03-14 12:21:03] -rw-r--r--. 2 boinc boinc    597516 Mar 14 09:25 input.tar.gz
[2026-03-14 12:21:03] -rw-r--r--. 1 boinc boinc      6709 Mar 14 09:25 init_data.xml
[2026-03-14 12:21:03] -rw-r--r--. 1 boinc boinc         0 Mar 14 09:25 boinc_lockfile
[2026-03-14 12:21:03] -rw-r--r--. 1 boinc boinc      2549 Mar 14 09:25 pandaJob.out
[2026-03-14 12:21:03] -rw-------. 1 boinc boinc   1004579 Mar 14 09:26 agis_schedconf.cvmfs.json
[2026-03-14 12:21:03] -rw-------. 1 boinc boinc   1511579 Mar 14 09:26 agis_ddmendpoints.agis.ALL.json
[2026-03-14 12:21:03] -rw-------. 1 boinc boinc       445 Mar 14 09:26 workernode_map.json
[2026-03-14 12:21:03] drwx------. 5 boinc boinc      4096 Mar 14 09:26 pilot3
[2026-03-14 12:21:03] -rw-------. 1 boinc boinc 261305912 Mar 14 12:19 HITS.48967076._000539.pool.root.1
[2026-03-14 12:21:03] -rw-r--r--. 1 boinc boinc       529 Mar 14 12:19 boinc_task_state.xml
[2026-03-14 12:21:03] -rw-------. 1 boinc boinc      1031 Mar 14 12:19 memory_monitor_summary.json
[2026-03-14 12:21:03] -rw-------. 1 boinc boinc    341247 Mar 14 12:19 log.48967076._000539.job.log.tgz.1
[2026-03-14 12:21:03] -rw-------. 1 boinc boinc      6368 Mar 14 12:20 heartbeat.json
[2026-03-14 12:21:03] -rw-------. 1 boinc boinc        95 Mar 14 12:20 pilot_heartbeat.json
[2026-03-14 12:21:03] -rw-------. 1 boinc boinc      5435 Mar 14 12:20 pilotlog.txt
[2026-03-14 12:21:03] -rw-------. 1 boinc boinc   1470434 Mar 14 12:20 log.48967076._000539.job.log.1
[2026-03-14 12:21:03] -rw-------. 1 boinc boinc       357 Mar 14 12:20 output.list
[2026-03-14 12:21:03] -rw-r--r--. 1 boinc boinc       620 Mar 14 12:20 runtime_log
[2026-03-14 12:21:03] -rw-------. 1 boinc boinc   1832960 Mar 14 12:20 result.tar.gz
[2026-03-14 12:21:03] -rw-r--r--. 1 boinc boinc      9222 Mar 14 12:20 runtime_log.err
[2026-03-14 12:21:03] -rw-------. 1 boinc boinc       665 Mar 14 12:20 pfZLDmHrpK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmFdjLDmKIu5ym.diag
[2026-03-14 12:21:03] -rw-r--r--. 1 boinc boinc        27 Mar 14 12:20 wrapper_checkpoint.txt
[2026-03-14 12:21:03] -rw-r--r--. 1 boinc boinc      8192 Mar 14 12:21 boinc_mmap_file
[2026-03-14 12:21:03] -rw-r--r--. 1 boinc boinc     20878 Mar 14 12:21 stderr.txt
[2026-03-14 12:21:03] HITS file was successfully produced:
[2026-03-14 12:21:03] -rw-------. 1 boinc boinc 261305912 Mar 14 12:19 shared/HITS.pool.root.1
[2026-03-14 12:21:03]  *** Contents of shared directory: ***
[2026-03-14 12:21:03] total 481340
[2026-03-14 12:21:03] -rw-r--r--. 2 boinc boinc 229125598 Mar 14 09:25 ATLAS.root_0
[2026-03-14 12:21:03] -rw-r--r--. 2 boinc boinc     15845 Mar 14 09:25 start_atlas.sh
[2026-03-14 12:21:03] -rw-r--r--. 2 boinc boinc    597516 Mar 14 09:25 input.tar.gz
[2026-03-14 12:21:03] -rw-------. 1 boinc boinc 261305912 Mar 14 12:19 HITS.pool.root.1
[2026-03-14 12:21:03] -rw-------. 1 boinc boinc   1832960 Mar 14 12:20 result.tar.gz
12:21:04 (4158009): run_atlas exited; CPU time 40732.945180
12:21:04 (4158009): called boinc_finish(0)

</stderr_txt>
]]>

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