Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:00:39 (3355263): wrapper (7.7.26015): starting
03:00:39 (3355263): wrapper: running run_atlas (--nthreads 8)
[2026-03-13 03:00:39] Arguments: --nthreads 8
[2026-03-13 03:00:39] Threads: 8
[2026-03-13 03:00:39] Checking for CVMFS
[2026-03-13 03:00:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 03:00:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 03:00:39] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 03:00:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 03:00:41] 2.13.3.0 7385 183739 346324 157230 3 852 31402654 32503809 60388 16776704 0 2137800846 99.626 2076726735 46099 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-13 03:00:41] CVMFS is ok
[2026-03-13 03:00:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 03:00:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 03:00:41] Further information can be found at the LHC@home message board.
[2026-03-13 03:00:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 03:00:41] Checking for apptainer binary...
[2026-03-13 03:00:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 03:00:41] Running /usr/bin/apptainer --version
[2026-03-13 03:00:41] apptainer version 1.4.5-2.el9
[2026-03-13 03:00:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 03:00:41] c8-7-1.aglt2.org
[2026-03-13 03:00:41] apptainer works
[2026-03-13 03:00:41] Set ATHENA_PROC_NUMBER=8
[2026-03-13 03:00:41] Set ATHENA_CORE_NUMBER=8
[2026-03-13 03:00:41] Starting ATLAS job with PandaID=7052645970
[2026-03-13 03:00:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 05:01:49]  *** The last 200 lines of the pilot log: ***
[2026-03-13 05:01:49] 2026-03-13 09:00:43,565 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-13 05:01:49] 2026-03-13 09:00:44,839 | INFO     | time since job start (7058s) is within the limit (345600.0s)
[2026-03-13 05:01:49] 2026-03-13 09:00:45,195 | INFO     | job 7052645970 has state=finished
[2026-03-13 05:01:49] 2026-03-13 09:00:45,195 | INFO     | preparing for final server update for job 7052645970 in state='finished'
[2026-03-13 05:01:49] 2026-03-13 09:00:45,195 | INFO     | reading metadata from: /tmp/boinchome/slots/5/PanDA_Pilot-7052645970/jobReport.json
[2026-03-13 05:01:49] 2026-03-13 09:00:45,197 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/5/workernode_map.json
[2026-03-13 05:01:49] 2026-03-13 09:00:45,197 | INFO     | this job has now completed (state=finished)
[2026-03-13 05:01:49] 2026-03-13 09:00:45,197 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-13 05:01:49] 2026-03-13 09:00:45,197 | INFO     | log transfer has been attempted: DONE
[2026-03-13 05:01:49] 2026-03-13 09:00:45,206 | INFO     | job 7052645970 has finished - writing final server update
[2026-03-13 05:01:49] 2026-03-13 09:00:45,206 | INFO     | total number of processed events: 400 (read)
[2026-03-13 05:01:49] 2026-03-13 09:00:45,279 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-7052645970/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 05:01:49] 2026-03-13 09:00:45,279 | INFO     | extracted standard info from prmon json
[2026-03-13 05:01:49] 2026-03-13 09:00:45,279 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 05:01:49] 2026-03-13 09:00:45,280 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 05:01:49] 2026-03-13 09:00:45,285 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 05:01:49] 2026-03-13 09:00:45,285 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 05:01:49] 2026-03-13 09:00:45,286 | INFO     | fitting pss+swap vs Time
[2026-03-13 05:01:49] 2026-03-13 09:00:45,286 | INFO     | sum of square deviations: 459408399.13157874
[2026-03-13 05:01:49] 2026-03-13 09:00:45,287 | INFO     | sum of deviations: 36102684768.921036
[2026-03-13 05:01:49] 2026-03-13 09:00:45,287 | INFO     | mean x: 1773388965.8157895
[2026-03-13 05:01:49] 2026-03-13 09:00:45,287 | INFO     | mean y: 2353880.3771929825
[2026-03-13 05:01:49] 2026-03-13 09:00:45,287 | INFO     | intersect: -139359710301.63452
[2026-03-13 05:01:49] 2026-03-13 09:00:45,287 | INFO     | chi2: 5.180542548339657
[2026-03-13 05:01:49] 2026-03-13 09:00:45,287 | INFO     | sum of square deviations: 401571827.39449537
[2026-03-13 05:01:49] 2026-03-13 09:00:45,287 | INFO     | sum of deviations: 41891899250.614655
[2026-03-13 05:01:49] 2026-03-13 09:00:45,287 | INFO     | mean x: 1773388813.3119266
[2026-03-13 05:01:49] 2026-03-13 09:00:45,287 | INFO     | mean y: 2368413.8348623854
[2026-03-13 05:01:49] 2026-03-13 09:00:45,287 | INFO     | intersect: -184997226755.59625
[2026-03-13 05:01:49] 2026-03-13 09:00:45,287 | INFO     | chi2: 4.400754679420603
[2026-03-13 05:01:49] 2026-03-13 09:00:45,288 | INFO     | current chi2=4.400754679420603 (change=15.052243305461754 %)
[2026-03-13 05:01:49] 2026-03-13 09:00:45,288 | INFO     | right removable region: 108
[2026-03-13 05:01:49] 2026-03-13 09:00:45,288 | INFO     | sum of square deviations: 401563776.11009157
[2026-03-13 05:01:49] 2026-03-13 09:00:45,288 | INFO     | sum of deviations: 710985280.2201862
[2026-03-13 05:01:49] 2026-03-13 09:00:45,288 | INFO     | mean x: 1773389118.3302753
[2026-03-13 05:01:49] 2026-03-13 09:00:45,288 | INFO     | mean y: 2446902.660550459
[2026-03-13 05:01:49] 2026-03-13 09:00:45,288 | INFO     | intersect: -3137411904.947155
[2026-03-13 05:01:49] 2026-03-13 09:00:45,288 | INFO     | chi2: 0.9990331866743007
[2026-03-13 05:01:49] 2026-03-13 09:00:45,288 | INFO     | current chi2=0.9990331866743007 (change=80.71566486806509 %)
[2026-03-13 05:01:49] 2026-03-13 09:00:45,288 | INFO     | sum of square deviations: 348789015.5384616
[2026-03-13 05:01:49] 2026-03-13 09:00:45,288 | INFO     | sum of deviations: -5182623697.307693
[2026-03-13 05:01:49] 2026-03-13 09:00:45,289 | INFO     | mean x: 1773389270.8461537
[2026-03-13 05:01:49] 2026-03-13 09:00:45,289 | INFO     | mean y: 2463784.605769231
[2026-03-13 05:01:49] 2026-03-13 09:00:45,289 | INFO     | intersect: 26353090811.806396
[2026-03-13 05:01:49] 2026-03-13 09:00:45,289 | INFO     | chi2: 0.8843363031039263
[2026-03-13 05:01:49] 2026-03-13 09:00:45,311 | INFO     | current chi2=0.8843363031039263 (change=11.480788135996855 %)
[2026-03-13 05:01:49] 2026-03-13 09:00:45,311 | INFO     | left removable region: 20
[2026-03-13 05:01:49] 2026-03-13 09:00:45,311 | INFO     | sum of square deviations: 211298182.36363629
[2026-03-13 05:01:49] 2026-03-13 09:00:45,311 | INFO     | sum of deviations: 853611392.7727273
[2026-03-13 05:01:49] 2026-03-13 09:00:45,311 | INFO     | mean x: 1773389392.8636363
[2026-03-13 05:01:49] 2026-03-13 09:00:45,311 | INFO     | mean y: 2488837.147727273
[2026-03-13 05:01:49] 2026-03-13 09:00:45,312 | INFO     | intersect: -7161725131.174733
[2026-03-13 05:01:49] 2026-03-13 09:00:45,312 | INFO     | chi2: 0.0001519103729311421
[2026-03-13 05:01:49] 2026-03-13 09:00:45,312 | INFO     | current memory leak: 4.04 B/s (using 88 data points, chi2=0.00)
[2026-03-13 05:01:49] 2026-03-13 09:00:45,312 | INFO     | could have reported an average CPU frequency of 3788 MHz (7 samples)
[2026-03-13 05:01:49] 2026-03-13 09:00:45,312 | INFO     | ..............................
[2026-03-13 05:01:49] 2026-03-13 09:00:45,312 | INFO     | . Timing measurements:
[2026-03-13 05:01:49] 2026-03-13 09:00:45,312 | INFO     | . get job = 0 s
[2026-03-13 05:01:49] 2026-03-13 09:00:45,312 | INFO     | . initial setup = 45 s
[2026-03-13 05:01:49] 2026-03-13 09:00:45,312 | INFO     | . payload setup = 81 s
[2026-03-13 05:01:49] 2026-03-13 09:00:45,312 | INFO     | . stage-in = 0 s
[2026-03-13 05:01:49] 2026-03-13 09:00:45,312 | INFO     | . payload execution = 6966 s
[2026-03-13 05:01:49] 2026-03-13 09:00:45,312 | INFO     | . stage-out = 1 s
[2026-03-13 05:01:49] 2026-03-13 09:00:45,312 | INFO     | . log creation = 0 s
[2026-03-13 05:01:49] 2026-03-13 09:00:45,312 | INFO     | ..............................
[2026-03-13 05:01:49] 2026-03-13 09:00:45,577 | INFO     | 
[2026-03-13 05:01:49] 2026-03-13 09:00:45,577 | INFO     | job summary report
[2026-03-13 05:01:49] 2026-03-13 09:00:45,577 | INFO     | --------------------------------------------------
[2026-03-13 05:01:49] 2026-03-13 09:00:45,577 | INFO     | PanDA job id: 7052645970
[2026-03-13 05:01:49] 2026-03-13 09:00:45,577 | INFO     | task id: 48967085
[2026-03-13 05:01:49] 2026-03-13 09:00:45,577 | INFO     | errors: (none)
[2026-03-13 05:01:49] 2026-03-13 09:00:45,577 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 05:01:49] 2026-03-13 09:00:45,577 | INFO     | pilot state: finished 
[2026-03-13 05:01:49] 2026-03-13 09:00:45,577 | INFO     | transexitcode: 0
[2026-03-13 05:01:49] 2026-03-13 09:00:45,577 | INFO     | exeerrorcode: 0
[2026-03-13 05:01:49] 2026-03-13 09:00:45,577 | INFO     | exeerrordiag: 
[2026-03-13 05:01:49] 2026-03-13 09:00:45,577 | INFO     | exitcode: 0
[2026-03-13 05:01:49] 2026-03-13 09:00:45,577 | INFO     | exitmsg: OK
[2026-03-13 05:01:49] 2026-03-13 09:00:45,577 | INFO     | cpuconsumptiontime: 27340 s
[2026-03-13 05:01:49] 2026-03-13 09:00:45,577 | INFO     | nevents: 400
[2026-03-13 05:01:49] 2026-03-13 09:00:45,577 | INFO     | neventsw: 0
[2026-03-13 05:01:49] 2026-03-13 09:00:45,577 | INFO     | pid: 3430936
[2026-03-13 05:01:49] 2026-03-13 09:00:45,577 | INFO     | pgrp: 3430936
[2026-03-13 05:01:49] 2026-03-13 09:00:45,577 | INFO     | corecount: 8
[2026-03-13 05:01:49] 2026-03-13 09:00:45,577 | INFO     | event service: False
[2026-03-13 05:01:49] 2026-03-13 09:00:45,577 | INFO     | sizes: {0: 2279699, 1: 2279783, 2: 2280244, 7052: 2307356, 7054: 2316354, 7055: 2316410, 7057: 2316732}
[2026-03-13 05:01:49] 2026-03-13 09:00:45,578 | INFO     | --------------------------------------------------
[2026-03-13 05:01:49] 2026-03-13 09:00:45,578 | INFO     | 
[2026-03-13 05:01:49] 2026-03-13 09:00:45,578 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-03-13 05:01:49] 2026-03-13 09:00:45,778 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 05:01:49] 2026-03-13 09:00:45,778 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 05:01:49] 2026-03-13 09:00:45,778 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 05:01:49] 2026-03-13 09:00:45,778 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 05:01:49] 2026-03-13 09:00:45,778 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 05:01:49] 2026-03-13 09:00:45,779 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 05:01:49] 2026-03-13 09:00:45,779 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 05:01:49] 2026-03-13 09:00:45,779 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 05:01:49] 2026-03-13 09:00:45,779 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 05:01:49] 2026-03-13 09:00:45,779 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 05:01:49] 2026-03-13 09:00:45,779 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 05:01:49] 2026-03-13 09:00:45,779 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 05:01:49] 2026-03-13 09:00:45,779 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 05:01:49] 2026-03-13 09:00:45,779 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 05:01:49] 2026-03-13 09:00:45,779 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 05:01:49] 2026-03-13 09:00:45,779 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 05:01:49] 2026-03-13 09:00:45,779 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 05:01:49] 2026-03-13 09:00:45,779 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 05:01:49] 2026-03-13 09:00:45,779 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 05:01:49] 2026-03-13 09:00:45,779 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 05:01:49] 2026-03-13 09:00:45,779 | INFO     | job 7052645970 has completed (purged errors)
[2026-03-13 05:01:49] 2026-03-13 09:00:45,779 | INFO     | overall cleanup function is called
[2026-03-13 05:01:49] 2026-03-13 09:00:46,786 | INFO     | --- collectZombieJob: --- 10, [3430936]
[2026-03-13 05:01:49] 2026-03-13 09:00:46,786 | INFO     | zombie collector waiting for pid 3430936
[2026-03-13 05:01:49] 2026-03-13 09:00:46,786 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 05:01:49] 2026-03-13 09:00:46,786 | INFO     | collected zombie processes
[2026-03-13 05:01:49] 2026-03-13 09:00:46,786 | INFO     | will attempt to kill all subprocesses of pid=3430936
[2026-03-13 05:01:49] 2026-03-13 09:00:48,523 | INFO     | process IDs to be killed: [3430936] (in reverse order)
[2026-03-13 05:01:49] 2026-03-13 09:00:48,848 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 05:01:49] 2026-03-13 09:00:48,848 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 05:01:49] 2026-03-13 09:00:48,902 | INFO     | did not find any defunct processes belonging to 3430936
[2026-03-13 05:01:49] 2026-03-13 09:00:48,996 | INFO     | did not find any defunct processes belonging to 3430936
[2026-03-13 05:01:49] 2026-03-13 09:00:48,996 | INFO     | ready for new job
[2026-03-13 05:01:49] 2026-03-13 09:00:48,996 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 05:01:49] 2026-03-13 09:00:48,997 | INFO     | **************************************
[2026-03-13 05:01:49] 2026-03-13 09:00:48,998 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 05:01:49] 2026-03-13 09:00:48,998 | INFO     | **************************************
[2026-03-13 05:01:49] 2026-03-13 09:00:48,998 | INFO     | 
[2026-03-13 05:01:49] 2026-03-13 09:00:49,002 | INFO     | architecture information:
[2026-03-13 05:01:49] 2026-03-13 09:00:49,002 | INFO     | executing command: cat /etc/os-release
[2026-03-13 05:01:49] 2026-03-13 09:00:49,044 | INFO     | cat /etc/os-release:
[2026-03-13 05:01:49] NAME="CentOS Linux"
[2026-03-13 05:01:49] VERSION="7 (Core)"
[2026-03-13 05:01:49] ID="centos"
[2026-03-13 05:01:49] ID_LIKE="rhel fedora"
[2026-03-13 05:01:49] VERSION_ID="7"
[2026-03-13 05:01:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 05:01:49] ANSI_COLOR="0;31"
[2026-03-13 05:01:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 05:01:49] HOME_URL="https://www.centos.org/"
[2026-03-13 05:01:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 05:01:49] 
[2026-03-13 05:01:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 05:01:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 05:01:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 05:01:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 05:01:49] 
[2026-03-13 05:01:49] 2026-03-13 09:00:49,044 | INFO     | **************************************
[2026-03-13 05:01:49] 2026-03-13 09:00:49,555 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-03-13 05:01:49] 2026-03-13 09:00:49,647 | INFO     | sufficient remaining disk space (91300560896 B)
[2026-03-13 05:01:49] 2026-03-13 09:00:49,647 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 05:01:49] 2026-03-13 09:00:49,647 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 05:01:49] 2026-03-13 09:00:49,647 | INFO     | update_server=False
[2026-03-13 05:01:49] 2026-03-13 09:00:49,647 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 05:01:49] 2026-03-13 09:00:49,648 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 05:01:49] 2026-03-13 09:00:49,648 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 05:01:49] 2026-03-13 09:00:49,648 | INFO     | aborting loop
[2026-03-13 05:01:49] 2026-03-13 09:00:49,881 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 05:01:49] 2026-03-13 09:00:50,026 | INFO     | all data control threads have been joined
[2026-03-13 05:01:49] 2026-03-13 09:00:50,424 | INFO     | all payload control threads have been joined
[2026-03-13 05:01:49] 2026-03-13 09:00:50,601 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 05:01:49] 2026-03-13 09:00:50,653 | INFO     | [job] retrieve thread has finished
[2026-03-13 05:01:49] 2026-03-13 09:00:50,656 | INFO     | [job] job monitor thread has finished
[2026-03-13 05:01:49] 2026-03-13 09:00:50,687 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 05:01:49] 2026-03-13 09:00:50,800 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 05:01:49] 2026-03-13 09:00:51,011 | INFO     | [payload] failed_post thread has finished
[2026-03-13 05:01:49] 2026-03-13 09:00:51,031 | INFO     | [data] control thread has finished
[2026-03-13 05:01:49] 2026-03-13 09:00:51,181 | INFO     | all job control threads have been joined
[2026-03-13 05:01:49] 2026-03-13 09:00:51,430 | INFO     | [payload] control thread has finished
[2026-03-13 05:01:49] 2026-03-13 09:00:51,607 | INFO     | [job] queue monitor thread has finished
[2026-03-13 05:01:49] 2026-03-13 09:00:51,666 | INFO     | [data] copytool_out thread has finished
[2026-03-13 05:01:49] 2026-03-13 09:00:51,884 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 05:01:49] 2026-03-13 09:00:51,884 | INFO     | [job] validate thread has finished
[2026-03-13 05:01:49] 2026-03-13 09:00:52,021 | INFO     | [payload] validate_post thread has finished
[2026-03-13 05:01:49] 2026-03-13 09:00:52,136 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 05:01:49] 2026-03-13 09:00:52,136 | INFO     | [data] copytool_in thread has finished
[2026-03-13 05:01:49] 2026-03-13 09:00:52,189 | INFO     | [job] control thread has finished
[2026-03-13 05:01:49] 2026-03-13 09:00:53,889 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 05:01:49] 2026-03-13 09:01:17,742 | INFO     | [monitor] cgroup control has ended
[2026-03-13 05:01:49] 2026-03-13 09:01:19,050 | INFO     | PID=3391673 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-13 05:01:49] 2026-03-13 09:01:19,051 | INFO     | .. there are 82 such processes running
[2026-03-13 05:01:49] 2026-03-13 09:01:19,051 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 05:01:49] 2026-03-13 09:01:19,051 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 05:01:49] 2026-03-13 09:01:19,051 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 05:01:49] 2026-03-13 09:01:19,307 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140171645835072)>', '<ExcThread(monitor, started 140171371890432)>']
[2026-03-13 05:01:49] 2026-03-13 09:01:20,057 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 05:01:49] 2026-03-13 09:01:20,057 | INFO     | [monitor] control thread has ended
[2026-03-13 05:01:49] 2026-03-13 09:01:24,333 | INFO     | all workflow threads have been joined
[2026-03-13 05:01:49] 2026-03-13 09:01:24,333 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 05:01:49] 2026-03-13 09:01:24,333 | INFO     | traces error code: 0
[2026-03-13 05:01:49] 2026-03-13 09:01:24,333 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 05:01:49] 2026-03-13 09:01:24,514 [wrapper] ==== pilot stdout END ====
[2026-03-13 05:01:49] 2026-03-13 09:01:24,535 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 05:01:49] 2026-03-13 09:01:24,548 [wrapper] pilotpid: 3391673
[2026-03-13 05:01:49] 2026-03-13 09:01:24,570 [wrapper] Pilot exit status: 0
[2026-03-13 05:01:49] 2026-03-13 09:01:24,694 [wrapper] pandaids: 7052645970
[2026-03-13 05:01:49] 2026-03-13 09:01:25,557 [wrapper] cleanup supervisor_pilot  716031 3391674
[2026-03-13 05:01:49] 2026-03-13 09:01:25,568 [wrapper] Test setup, not cleaning
[2026-03-13 05:01:49] 2026-03-13 09:01:25,591 [wrapper] apfmon messages muted
[2026-03-13 05:01:49] 2026-03-13 09:01:25,612 [wrapper] ==== wrapper stdout END ====
[2026-03-13 05:01:49] 2026-03-13 09:01:25,638 [wrapper] ==== wrapper stderr END ====
[2026-03-13 05:01:49]  *** Error codes and diagnostics ***
[2026-03-13 05:01:49]     "exeErrorCode": 0,
[2026-03-13 05:01:49]     "exeErrorDiag": "",
[2026-03-13 05:01:49]     "pilotErrorCode": 0,
[2026-03-13 05:01:49]     "pilotErrorDiag": "",
[2026-03-13 05:01:49]  *** Listing of results directory ***
[2026-03-13 05:01:49] total 409176
[2026-03-13 05:01:49] -rw-r--r--. 1 boincer umatlas      5111 Mar 12 20:52 queuedata.json
[2026-03-13 05:01:49] -rw-r--r--. 1 boincer umatlas    585013 Mar 12 20:52 pilot3.tar.gz
[2026-03-13 05:01:49] -rwx------. 1 boincer umatlas     36322 Mar 12 20:52 runpilot2-wrapper.sh
[2026-03-13 05:01:49] -rw-r--r--. 1 boincer umatlas       100 Mar 13 03:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 05:01:49] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 13 03:00 run_atlas
[2026-03-13 05:01:49] -rw-r--r--. 1 boincer umatlas       105 Mar 13 03:00 job.xml
[2026-03-13 05:01:49] -rw-r--r--. 2 boincer umatlas 210930036 Mar 13 03:00 EVNT.48967083._000234.pool.root.1
[2026-03-13 05:01:49] -rw-r--r--. 2 boincer umatlas     15845 Mar 13 03:00 start_atlas.sh
[2026-03-13 05:01:49] drwxrwx--x. 2 boincer umatlas      4096 Mar 13 03:00 shared
[2026-03-13 05:01:49] -rw-r--r--. 2 boincer umatlas    597523 Mar 13 03:00 input.tar.gz
[2026-03-13 05:01:49] -rw-r--r--. 1 boincer umatlas         0 Mar 13 03:00 boinc_lockfile
[2026-03-13 05:01:49] -rw-r--r--. 1 boincer umatlas      2561 Mar 13 03:00 pandaJob.out
[2026-03-13 05:01:49] -rw-------. 1 boincer umatlas        57 Mar 13 03:00 setup.sh.local
[2026-03-13 05:01:49] -rw-------. 1 boincer umatlas   1006522 Mar 13 03:02 agis_schedconf.cvmfs.json
[2026-03-13 05:01:49] -rw-------. 1 boincer umatlas   1511578 Mar 13 03:02 agis_ddmendpoints.agis.ALL.json
[2026-03-13 05:01:49] -rw-------. 1 boincer umatlas       430 Mar 13 03:03 workernode_map.json
[2026-03-13 05:01:49] drwx------. 5 boincer umatlas      4096 Mar 13 03:03 pilot3
[2026-03-13 05:01:49] -rw-r--r--. 1 boincer umatlas      7170 Mar 13 04:54 init_data.xml
[2026-03-13 05:01:49] -rw-------. 1 boincer umatlas 201711633 Mar 13 05:00 HITS.48967085._016258.pool.root.1
[2026-03-13 05:01:49] -rw-r--r--. 1 boincer umatlas       529 Mar 13 05:00 boinc_task_state.xml
[2026-03-13 05:01:49] -rw-------. 1 boincer umatlas        95 Mar 13 05:00 pilot_heartbeat.json
[2026-03-13 05:01:49] -rw-------. 1 boincer umatlas      1034 Mar 13 05:00 memory_monitor_summary.json
[2026-03-13 05:01:49] -rw-------. 1 boincer umatlas    346503 Mar 13 05:00 log.48967085._016258.job.log.tgz.1
[2026-03-13 05:01:49] -rw-------. 1 boincer umatlas      6327 Mar 13 05:00 heartbeat.json
[2026-03-13 05:01:49] -rw-------. 1 boincer umatlas      4820 Mar 13 05:01 pilotlog.txt
[2026-03-13 05:01:49] -rw-------. 1 boincer umatlas    860061 Mar 13 05:01 log.48967085._016258.job.log.1
[2026-03-13 05:01:49] -rw-------. 1 boincer umatlas       357 Mar 13 05:01 output.list
[2026-03-13 05:01:49] -rw-r--r--. 1 boincer umatlas       620 Mar 13 05:01 runtime_log
[2026-03-13 05:01:49] -rw-------. 1 boincer umatlas   1228800 Mar 13 05:01 result.tar.gz
[2026-03-13 05:01:49] -rw-r--r--. 1 boincer umatlas      9331 Mar 13 05:01 runtime_log.err
[2026-03-13 05:01:49] -rw-------. 1 boincer umatlas       650 Mar 13 05:01 apeLDmDw5K9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmKCoLDmYCF6Zm.diag
[2026-03-13 05:01:49] -rw-r--r--. 1 boincer umatlas        27 Mar 13 05:01 wrapper_checkpoint.txt
[2026-03-13 05:01:49] -rw-r--r--. 1 boincer umatlas      8192 Mar 13 05:01 boinc_mmap_file
[2026-03-13 05:01:49] -rw-r--r--. 1 boincer umatlas     21099 Mar 13 05:01 stderr.txt
[2026-03-13 05:01:49] HITS file was successfully produced:
[2026-03-13 05:01:49] -rw-------. 1 boincer umatlas 201711633 Mar 13 05:00 shared/HITS.pool.root.1
[2026-03-13 05:01:49]  *** Contents of shared directory: ***
[2026-03-13 05:01:49] total 404780
[2026-03-13 05:01:49] -rw-r--r--. 2 boincer umatlas 210930036 Mar 13 03:00 ATLAS.root_0
[2026-03-13 05:01:49] -rw-r--r--. 2 boincer umatlas     15845 Mar 13 03:00 start_atlas.sh
[2026-03-13 05:01:49] -rw-r--r--. 2 boincer umatlas    597523 Mar 13 03:00 input.tar.gz
[2026-03-13 05:01:49] -rw-------. 1 boincer umatlas 201711633 Mar 13 05:00 HITS.pool.root.1
[2026-03-13 05:01:49] -rw-------. 1 boincer umatlas   1228800 Mar 13 05:01 result.tar.gz
05:01:51 (3355263): run_atlas exited; CPU time 27646.312051
05:01:51 (3355263): called boinc_finish(0)

</stderr_txt>
]]>

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